Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:30:44 (554610): wrapper (7.7.26015): starting
04:30:44 (554610): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 04:30:44] Arguments: --nthreads 8
[2026-01-12 04:30:44] Threads: 8
[2026-01-12 04:30:44] Checking for CVMFS
[2026-01-12 04:30:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 04:30:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 04:30:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 04:30:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 04:30:45] 2.13.3.0 11285 97507 158136 155047 3 84 25692661 32935937 20212 16776704 0 541883370 99.542 696091401 37217 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 04:30:45] CVMFS is ok
[2026-01-12 04:30:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 04:30:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 04:30:45] Further information can be found at the LHC@home message board.
[2026-01-12 04:30:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 04:30:45] Checking for apptainer binary...
[2026-01-12 04:30:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 04:30:45] Running /usr/bin/apptainer --version
[2026-01-12 04:30:45] apptainer version 1.4.5-2.el9
[2026-01-12 04:30:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 04:30:45] c7-3-29.aglt2.org
[2026-01-12 04:30:45] apptainer works
[2026-01-12 04:30:45] Set ATHENA_PROC_NUMBER=8
[2026-01-12 04:30:45] Set ATHENA_CORE_NUMBER=8
[2026-01-12 04:30:45] Starting ATLAS job with PandaID=6966858820
[2026-01-12 04:30:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 00:44:21]  *** The last 200 lines of the pilot log: ***
[2026-01-13 00:44:21] 2026-01-13 05:43:21,968 | INFO     | this job has now completed (state=finished)
[2026-01-13 00:44:21] 2026-01-13 05:43:21,968 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-13 00:44:21] 2026-01-13 05:43:21,968 | INFO     | log transfer has been attempted: DONE
[2026-01-13 00:44:21] 2026-01-13 05:43:21,968 | INFO     | job 6966858820 has finished - writing final server update
[2026-01-13 00:44:21] 2026-01-13 05:43:21,969 | INFO     | total number of processed events: 2050 (read)
[2026-01-13 00:44:21] 2026-01-13 05:43:21,969 | INFO     | executing command: lscpu
[2026-01-13 00:44:21] 2026-01-13 05:43:22,049 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 00:44:21] 2026-01-13 05:43:22,721 | INFO     | monitor loop #4758: job 0:6966858820 is in state 'finished'
[2026-01-13 00:44:21] 2026-01-13 05:43:22,722 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 00:44:21] 2026-01-13 05:43:23,682 | INFO     | time since job start (72734s) is within the limit (349056.0s)
[2026-01-13 00:44:21] 2026-01-13 05:43:25,243 | INFO     | monitor loop #4759: job 0:6966858820 is in state 'finished'
[2026-01-13 00:44:21] 2026-01-13 05:43:25,243 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 00:44:21] 2026-01-13 05:43:25,724 | INFO     | PID=558347 has CPU usage=15.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 00:44:21] 2026-01-13 05:43:25,724 | INFO     | .. there are 30 such processes running
[2026-01-13 00:44:21] 2026-01-13 05:43:26,724 | INFO     | time since job start (72737s) is within the limit (349056.0s)
[2026-01-13 00:44:21] 2026-01-13 05:43:27,748 | INFO     | monitor loop #4760: job 0:6966858820 is in state 'finished'
[2026-01-13 00:44:21] 2026-01-13 05:43:27,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 00:44:21] 2026-01-13 05:43:28,731 | INFO     | time since job start (72739s) is within the limit (349056.0s)
[2026-01-13 00:44:21] 2026-01-13 05:43:29,880 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 00:44:21] 2026-01-13 05:43:29,886 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3233.719781249998
[2026-01-13 00:44:21] 2026-01-13 05:43:29,901 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6966858820/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 00:44:21] 2026-01-13 05:43:29,902 | INFO     | extracted standard info from prmon json
[2026-01-13 00:44:21] 2026-01-13 05:43:29,902 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 00:44:21] 2026-01-13 05:43:29,902 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 00:44:21] 2026-01-13 05:43:29,918 | INFO     | fitting pss+swap vs Time
[2026-01-13 00:44:21] 2026-01-13 05:43:29,919 | INFO     | sum of square deviations: 525210908851.99207
[2026-01-13 00:44:21] 2026-01-13 05:43:29,947 | INFO     | sum of deviations: 4825771630755.58
[2026-01-13 00:44:21] 2026-01-13 05:43:29,947 | INFO     | mean x: 1768246641.7525167
[2026-01-13 00:44:21] 2026-01-13 05:43:29,947 | INFO     | mean y: 3385361.0562080536
[2026-01-13 00:44:21] 2026-01-13 05:43:29,947 | INFO     | intersect: -16243715253.437733
[2026-01-13 00:44:21] 2026-01-13 05:43:29,948 | INFO     | chi2: 15.015139655939448
[2026-01-13 00:44:21] 2026-01-13 05:43:29,949 | INFO     | sum of square deviations: 518630254769.11475
[2026-01-13 00:44:21] 2026-01-13 05:43:29,975 | INFO     | sum of deviations: 5308569108491.707
[2026-01-13 00:44:21] 2026-01-13 05:43:29,976 | INFO     | mean x: 1768246489.2577927
[2026-01-13 00:44:21] 2026-01-13 05:43:29,976 | INFO     | mean y: 3396550.1120471777
[2026-01-13 00:44:21] 2026-01-13 05:43:29,976 | INFO     | intersect: -18095930673.3869
[2026-01-13 00:44:21] 2026-01-13 05:43:29,977 | INFO     | chi2: 11.756507721962414
[2026-01-13 00:44:21] 2026-01-13 05:43:29,977 | INFO     | current chi2=11.756507721962414 (change=21.702308527566952 %)
[2026-01-13 00:44:21] 2026-01-13 05:43:29,977 | INFO     | right removable region: 1186
[2026-01-13 00:44:21] 2026-01-13 05:43:29,978 | INFO     | sum of square deviations: 518629344039.1153
[2026-01-13 00:44:21] 2026-01-13 05:43:30,005 | INFO     | sum of deviations: 4299603983375.395
[2026-01-13 00:44:21] 2026-01-13 05:43:30,005 | INFO     | mean x: 1768246794.2577927
[2026-01-13 00:44:21] 2026-01-13 05:43:30,005 | INFO     | mean y: 3397550.796124684
[2026-01-13 00:44:21] 2026-01-13 05:43:30,006 | INFO     | intersect: -14655936803.428488
[2026-01-13 00:44:21] 2026-01-13 05:43:30,007 | INFO     | chi2: 11.337108842819898
[2026-01-13 00:44:21] 2026-01-13 05:43:30,007 | INFO     | current chi2=11.337108842819898 (change=24.495481876285137 %)
[2026-01-13 00:44:21] 2026-01-13 05:43:30,007 | INFO     | left removable region: 10
[2026-01-13 00:44:21] 2026-01-13 05:43:30,008 | INFO     | sum of square deviations: 504345007266.54987
[2026-01-13 00:44:21] 2026-01-13 05:43:30,034 | INFO     | sum of deviations: 4389137161969.7495
[2026-01-13 00:44:21] 2026-01-13 05:43:30,035 | INFO     | mean x: 1768246763.7695577
[2026-01-13 00:44:21] 2026-01-13 05:43:30,035 | INFO     | mean y: 3423335.4455782315
[2026-01-13 00:44:21] 2026-01-13 05:43:30,035 | INFO     | intersect: -15385006153.44183
[2026-01-13 00:44:21] 2026-01-13 05:43:30,036 | INFO     | chi2: 3.923999782912451
[2026-01-13 00:44:21] 2026-01-13 05:43:30,036 | INFO     | current memory leak: 8.70 B/s (using 1176 data points, chi2=3.92)
[2026-01-13 00:44:21] 2026-01-13 05:43:30,037 | INFO     | could have reported an average CPU frequency of 3176 MHz (43 samples)
[2026-01-13 00:44:21] 2026-01-13 05:43:30,037 | INFO     | ..............................
[2026-01-13 00:44:21] 2026-01-13 05:43:30,037 | INFO     | . Timing measurements:
[2026-01-13 00:44:21] 2026-01-13 05:43:30,037 | INFO     | . get job = 0 s
[2026-01-13 00:44:21] 2026-01-13 05:43:30,037 | INFO     | . initial setup = 3 s
[2026-01-13 00:44:21] 2026-01-13 05:43:30,037 | INFO     | . payload setup = 17 s
[2026-01-13 00:44:21] 2026-01-13 05:43:30,038 | INFO     | . stage-in = 0 s
[2026-01-13 00:44:21] 2026-01-13 05:43:30,038 | INFO     | . payload execution = 72682 s
[2026-01-13 00:44:21] 2026-01-13 05:43:30,038 | INFO     | . stage-out = 4 s
[2026-01-13 00:44:21] 2026-01-13 05:43:30,038 | INFO     | . log creation = 0 s
[2026-01-13 00:44:21] 2026-01-13 05:43:30,038 | INFO     | ..............................
[2026-01-13 00:44:21] 2026-01-13 05:43:30,549 | INFO     | 
[2026-01-13 00:44:21] 2026-01-13 05:43:30,550 | INFO     | job summary report
[2026-01-13 00:44:21] 2026-01-13 05:43:30,550 | INFO     | --------------------------------------------------
[2026-01-13 00:44:21] 2026-01-13 05:43:30,550 | INFO     | PanDA job id: 6966858820
[2026-01-13 00:44:21] 2026-01-13 05:43:30,550 | INFO     | task id: 48187943
[2026-01-13 00:44:21] 2026-01-13 05:43:30,550 | INFO     | errors: (none)
[2026-01-13 00:44:21] 2026-01-13 05:43:30,550 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 00:44:21] 2026-01-13 05:43:30,550 | INFO     | pilot state: finished 
[2026-01-13 00:44:21] 2026-01-13 05:43:30,550 | INFO     | transexitcode: 0
[2026-01-13 00:44:21] 2026-01-13 05:43:30,550 | INFO     | exeerrorcode: 0
[2026-01-13 00:44:21] 2026-01-13 05:43:30,550 | INFO     | exeerrordiag: 
[2026-01-13 00:44:21] 2026-01-13 05:43:30,550 | INFO     | exitcode: 0
[2026-01-13 00:44:21] 2026-01-13 05:43:30,551 | INFO     | exitmsg: OK
[2026-01-13 00:44:21] 2026-01-13 05:43:30,551 | INFO     | cpuconsumptiontime: 235889 s
[2026-01-13 00:44:21] 2026-01-13 05:43:30,551 | INFO     | nevents: 2050
[2026-01-13 00:44:21] 2026-01-13 05:43:30,551 | INFO     | neventsw: 0
[2026-01-13 00:44:21] 2026-01-13 05:43:30,551 | INFO     | pid: 566095
[2026-01-13 00:44:21] 2026-01-13 05:43:30,551 | INFO     | pgrp: 566095
[2026-01-13 00:44:21] 2026-01-13 05:43:30,551 | INFO     | corecount: 8
[2026-01-13 00:44:21] 2026-01-13 05:43:30,551 | INFO     | event service: False
[2026-01-13 00:44:21] 2026-01-13 05:43:30,551 | INFO     | sizes: {0: 2284621, 8: 2284883, 11: 2284911, 72703: 2363676, 72708: 2372674, 72710: 2372730, 72721: 2373104}
[2026-01-13 00:44:21] 2026-01-13 05:43:30,551 | INFO     | --------------------------------------------------
[2026-01-13 00:44:21] 2026-01-13 05:43:30,551 | INFO     | 
[2026-01-13 00:44:21] 2026-01-13 05:43:30,551 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-13 00:44:21] 2026-01-13 05:43:30,573 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 00:44:21] 2026-01-13 05:43:30,573 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 00:44:21] 2026-01-13 05:43:30,573 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 00:44:21] 2026-01-13 05:43:30,573 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 00:44:21] 2026-01-13 05:43:30,574 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 00:44:21] 2026-01-13 05:43:30,574 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 00:44:21] 2026-01-13 05:43:30,574 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 00:44:21] 2026-01-13 05:43:30,574 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 00:44:21] 2026-01-13 05:43:30,574 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 00:44:21] 2026-01-13 05:43:30,574 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 00:44:21] 2026-01-13 05:43:30,574 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 00:44:21] 2026-01-13 05:43:30,574 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 00:44:21] 2026-01-13 05:43:30,574 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 00:44:21] 2026-01-13 05:43:30,574 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 00:44:21] 2026-01-13 05:43:30,574 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 00:44:21] 2026-01-13 05:43:30,574 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 00:44:21] 2026-01-13 05:43:30,575 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 00:44:21] 2026-01-13 05:43:30,575 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 00:44:21] 2026-01-13 05:43:30,575 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 00:44:21] 2026-01-13 05:43:30,575 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 00:44:21] 2026-01-13 05:43:30,575 | INFO     | job 6966858820 has completed (purged errors)
[2026-01-13 00:44:21] 2026-01-13 05:43:30,575 | INFO     | overall cleanup function is called
[2026-01-13 00:44:21] 2026-01-13 05:43:31,612 | INFO     | --- collectZombieJob: --- 10, [566095]
[2026-01-13 00:44:21] 2026-01-13 05:43:31,612 | INFO     | zombie collector waiting for pid 566095
[2026-01-13 00:44:21] 2026-01-13 05:43:31,613 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 00:44:21] 2026-01-13 05:43:31,613 | INFO     | collected zombie processes
[2026-01-13 00:44:21] 2026-01-13 05:43:31,613 | INFO     | will attempt to kill all subprocesses of pid=566095
[2026-01-13 00:44:21] 2026-01-13 05:43:32,368 | INFO     | process IDs to be killed: [566095] (in reverse order)
[2026-01-13 00:44:21] 2026-01-13 05:43:32,582 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 00:44:21] 2026-01-13 05:43:32,582 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 00:44:21] 2026-01-13 05:43:32,637 | INFO     | did not find any defunct processes belonging to 566095
[2026-01-13 00:44:21] 2026-01-13 05:43:32,657 | INFO     | did not find any defunct processes belonging to 566095
[2026-01-13 00:44:21] 2026-01-13 05:43:32,658 | INFO     | ready for new job
[2026-01-13 00:44:21] 2026-01-13 05:43:32,658 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 00:44:21] 2026-01-13 05:43:32,686 | INFO     | ***************************************
[2026-01-13 00:44:21] 2026-01-13 05:43:32,686 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 00:44:21] 2026-01-13 05:43:32,686 | INFO     | ***************************************
[2026-01-13 00:44:21] 2026-01-13 05:43:32,686 | INFO     | 
[2026-01-13 00:44:21] 2026-01-13 05:43:32,691 | INFO     | architecture information:
[2026-01-13 00:44:21] 2026-01-13 05:43:32,713 | INFO     | executing command: cat /etc/os-release
[2026-01-13 00:44:21] 2026-01-13 05:43:32,746 | INFO     | cat /etc/os-release:
[2026-01-13 00:44:21] NAME="CentOS Linux"
[2026-01-13 00:44:21] VERSION="7 (Core)"
[2026-01-13 00:44:21] ID="centos"
[2026-01-13 00:44:21] ID_LIKE="rhel fedora"
[2026-01-13 00:44:21] VERSION_ID="7"
[2026-01-13 00:44:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 00:44:21] ANSI_COLOR="0;31"
[2026-01-13 00:44:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 00:44:21] HOME_URL="https://www.centos.org/"
[2026-01-13 00:44:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 00:44:21] 
[2026-01-13 00:44:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 00:44:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 00:44:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 00:44:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 00:44:21] 
[2026-01-13 00:44:21] 2026-01-13 05:43:32,747 | INFO     | ***************************************
[2026-01-13 00:44:21] 2026-01-13 05:43:33,251 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-13 00:44:21] 2026-01-13 05:43:33,285 | INFO     | sufficient remaining disk space (72923217920 B)
[2026-01-13 00:44:21] 2026-01-13 05:43:33,285 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 00:44:21] 2026-01-13 05:43:33,285 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 00:44:21] 2026-01-13 05:43:33,286 | INFO     | update_server=False
[2026-01-13 00:44:21] 2026-01-13 05:43:33,286 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 00:44:21] 2026-01-13 05:43:33,286 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 00:44:21] 2026-01-13 05:43:33,536 | INFO     | all payload control threads have been joined
[2026-01-13 00:44:21] 2026-01-13 05:43:33,773 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 00:44:21] 2026-01-13 05:43:33,773 | INFO     | aborting loop
[2026-01-13 00:44:21] 2026-01-13 05:43:33,800 | INFO     | all job control threads have been joined
[2026-01-13 00:44:21] 2026-01-13 05:43:34,128 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 00:44:21] 2026-01-13 05:43:34,299 | INFO     | [job] retrieve thread has finished
[2026-01-13 00:44:21] 2026-01-13 05:43:34,345 | INFO     | all data control threads have been joined
[2026-01-13 00:44:21] 2026-01-13 05:43:34,359 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 00:44:21] 2026-01-13 05:43:34,543 | INFO     | [payload] control thread has finished
[2026-01-13 00:44:21] 2026-01-13 05:43:34,778 | INFO     | [job] job monitor thread has finished
[2026-01-13 00:44:21] 2026-01-13 05:43:34,805 | INFO     | [job] control thread has finished
[2026-01-13 00:44:21] 2026-01-13 05:43:35,149 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 00:44:21] 2026-01-13 05:43:35,292 | INFO     | [data] copytool_out thread has finished
[2026-01-13 00:44:21] 2026-01-13 05:43:35,350 | INFO     | [data] control thread has finished
[2026-01-13 00:44:21] 2026-01-13 05:43:35,388 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 00:44:21] 2026-01-13 05:43:35,399 | INFO     | [payload] failed_post thread has finished
[2026-01-13 00:44:21] 2026-01-13 05:43:35,576 | INFO     | [data] copytool_in thread has finished
[2026-01-13 00:44:21] 2026-01-13 05:43:35,578 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 00:44:21] 2026-01-13 05:43:35,602 | INFO     | [payload] validate_post thread has finished
[2026-01-13 00:44:21] 2026-01-13 05:43:35,637 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 00:44:21] 2026-01-13 05:43:35,795 | INFO     | [job] validate thread has finished
[2026-01-13 00:44:21] 2026-01-13 05:43:36,155 | INFO     | [job] queue monitor thread has finished
[2026-01-13 00:44:21] 2026-01-13 05:43:38,136 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 00:44:21] 2026-01-13 05:44:02,528 | INFO     | PID=558347 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 00:44:21] 2026-01-13 05:44:02,529 | INFO     | .. there are 31 such processes running
[2026-01-13 00:44:21] 2026-01-13 05:44:02,529 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 00:44:21] 2026-01-13 05:44:02,529 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 00:44:21] 2026-01-13 05:44:02,530 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 00:44:21] 2026-01-13 05:44:13,770 | INFO     | [monitor] cgroup control has ended
[2026-01-13 00:44:21] 2026-01-13 05:44:15,751 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140608574637888)>', '<ExcThread(monitor, started 140608085677824)>']
[2026-01-13 00:44:21] 2026-01-13 05:44:16,607 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 00:44:21] 2026-01-13 05:44:16,607 | INFO     | [monitor] control thread has ended
[2026-01-13 00:44:21] 2026-01-13 05:44:20,777 | INFO     | all workflow threads have been joined
[2026-01-13 00:44:21] 2026-01-13 05:44:20,777 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 00:44:21] 2026-01-13 05:44:20,778 | INFO     | traces error code: 0
[2026-01-13 00:44:21] 2026-01-13 05:44:20,778 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 00:44:21] 2026-01-13 05:44:20,927 [wrapper] ==== pilot stdout END ====
[2026-01-13 00:44:21] 2026-01-13 05:44:20,937 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 00:44:21] 2026-01-13 05:44:20,940 [wrapper] pilotpid: 558347
[2026-01-13 00:44:21] 2026-01-13 05:44:20,942 [wrapper] Pilot exit status: 0
[2026-01-13 00:44:21] 2026-01-13 05:44:20,973 [wrapper] pandaids: 6966858820
[2026-01-13 00:44:21] 2026-01-13 05:44:21,208 [wrapper] cleanup supervisor_pilot 1529495 558348
[2026-01-13 00:44:21] 2026-01-13 05:44:21,226 [wrapper] Test setup, not cleaning
[2026-01-13 00:44:21] 2026-01-13 05:44:21,238 [wrapper] apfmon messages muted
[2026-01-13 00:44:21] 2026-01-13 05:44:21,241 [wrapper] ==== wrapper stdout END ====
[2026-01-13 00:44:21] 2026-01-13 05:44:21,245 [wrapper] ==== wrapper stderr END ====
[2026-01-13 00:44:21]  *** Error codes and diagnostics ***
[2026-01-13 00:44:21]     "exeErrorCode": 0,
[2026-01-13 00:44:21]     "exeErrorDiag": "",
[2026-01-13 00:44:21]     "pilotErrorCode": 0,
[2026-01-13 00:44:21]     "pilotErrorDiag": "",
[2026-01-13 00:44:21]  *** Listing of results directory ***
[2026-01-13 00:44:21] total 1502760
[2026-01-13 00:44:21] -rwx------. 1 boincer umatlas      36322 Jan 12 03:50 runpilot2-wrapper.sh
[2026-01-13 00:44:21] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 03:50 queuedata.json
[2026-01-13 00:44:21] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 03:50 pilot3.tar.gz
[2026-01-13 00:44:21] -rw-r--r--. 1 boincer umatlas        100 Jan 12 04:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 00:44:21] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 04:30 run_atlas
[2026-01-13 00:44:21] -rw-r--r--. 1 boincer umatlas        105 Jan 12 04:30 job.xml
[2026-01-13 00:44:21] -rw-r--r--. 2 boincer umatlas  322132835 Jan 12 04:30 EVNT.48118027._000148.pool.root.1
[2026-01-13 00:44:21] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 04:30 start_atlas.sh
[2026-01-13 00:44:21] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 04:30 shared
[2026-01-13 00:44:21] -rw-r--r--. 2 boincer umatlas     592611 Jan 12 04:30 input.tar.gz
[2026-01-13 00:44:21] -rw-r--r--. 1 boincer umatlas          0 Jan 12 04:30 boinc_lockfile
[2026-01-13 00:44:21] -rw-r--r--. 1 boincer umatlas       2896 Jan 12 04:30 pandaJob.out
[2026-01-13 00:44:21] -rw-------. 1 boincer umatlas         57 Jan 12 04:30 setup.sh.local
[2026-01-13 00:44:21] -rw-------. 1 boincer umatlas     987688 Jan 12 04:31 agis_schedconf.cvmfs.json
[2026-01-13 00:44:21] drwx------. 5 boincer umatlas       4096 Jan 12 04:31 pilot3
[2026-01-13 00:44:21] -rw-r--r--. 1 boincer umatlas        533 Jan 13 00:33 boinc_task_state.xml
[2026-01-13 00:44:21] -rw-r--r--. 1 boincer umatlas       6946 Jan 13 00:36 init_data.xml
[2026-01-13 00:44:21] -rw-------. 1 boincer umatlas 1188013793 Jan 13 00:42 HITS.48187943._000721.pool.root.1
[2026-01-13 00:44:21] -rw-------. 1 boincer umatlas       1064 Jan 13 00:43 memory_monitor_summary.json
[2026-01-13 00:44:21] -rw-------. 1 boincer umatlas    1516240 Jan 13 00:43 agis_ddmendpoints.agis.ALL.json
[2026-01-13 00:44:21] -rw-------. 1 boincer umatlas    2684044 Jan 13 00:43 log.48187943._000721.job.log.tgz.1
[2026-01-13 00:44:21] -rw-------. 1 boincer umatlas      27714 Jan 13 00:43 heartbeat.json
[2026-01-13 00:44:21] -rw-------. 1 boincer umatlas         95 Jan 13 00:44 pilot_heartbeat.json
[2026-01-13 00:44:21] -rw-------. 1 boincer umatlas       4823 Jan 13 00:44 pilotlog.txt
[2026-01-13 00:44:21] -rw-------. 1 boincer umatlas    9678425 Jan 13 00:44 log.48187943._000721.job.log.1
[2026-01-13 00:44:21] -rw-------. 1 boincer umatlas        353 Jan 13 00:44 output.list
[2026-01-13 00:44:21] -rw-r--r--. 1 boincer umatlas        620 Jan 13 00:44 runtime_log
[2026-01-13 00:44:21] -rw-------. 1 boincer umatlas   12400640 Jan 13 00:44 result.tar.gz
[2026-01-13 00:44:21] -rw-r--r--. 1 boincer umatlas       9338 Jan 13 00:44 runtime_log.err
[2026-01-13 00:44:21] -rw-------. 1 boincer umatlas        667 Jan 13 00:44 JvYMDmxnSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhEnKDmPCYHTn.diag
[2026-01-13 00:44:21] -rw-r--r--. 1 boincer umatlas         29 Jan 13 00:44 wrapper_checkpoint.txt
[2026-01-13 00:44:21] -rw-r--r--. 1 boincer umatlas       8192 Jan 13 00:44 boinc_mmap_file
[2026-01-13 00:44:21] -rw-r--r--. 1 boincer umatlas      21716 Jan 13 00:44 stderr.txt
[2026-01-13 00:44:21] HITS file was successfully produced:
[2026-01-13 00:44:21] -rw-------. 1 boincer umatlas 1188013793 Jan 13 00:42 shared/HITS.pool.root.1
[2026-01-13 00:44:21]  *** Contents of shared directory: ***
[2026-01-13 00:44:21] total 1487468
[2026-01-13 00:44:21] -rw-r--r--. 2 boincer umatlas  322132835 Jan 12 04:30 ATLAS.root_0
[2026-01-13 00:44:21] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 04:30 start_atlas.sh
[2026-01-13 00:44:21] -rw-r--r--. 2 boincer umatlas     592611 Jan 12 04:30 input.tar.gz
[2026-01-13 00:44:21] -rw-------. 1 boincer umatlas 1188013793 Jan 13 00:42 HITS.pool.root.1
[2026-01-13 00:44:21] -rw-------. 1 boincer umatlas   12400640 Jan 13 00:44 result.tar.gz
00:44:23 (554610): run_atlas exited; CPU time 235958.922395
00:44:23 (554610): called boinc_finish(0)

</stderr_txt>
]]>

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