Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:54:15 (1401264): wrapper (7.7.26015): starting
03:54:15 (1401264): wrapper: running run_atlas (--nthreads 11)
[2026-01-12 03:54:15] Arguments: --nthreads 11
[2026-01-12 03:54:15] Threads: 11
[2026-01-12 03:54:15] Checking for CVMFS
[2026-01-12 03:54:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 03:54:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 03:54:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 03:54:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 03:54:15] 2.13.3.0 9582 97494 172452 155045 1 161 39369396 40960000 18892 16776704 0 1133323878 99.717 846809518 48794 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 03:54:15] CVMFS is ok
[2026-01-12 03:54:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 03:54:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 03:54:15] Further information can be found at the LHC@home message board.
[2026-01-12 03:54:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 03:54:15] Checking for apptainer binary...
[2026-01-12 03:54:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 03:54:15] Running /usr/bin/apptainer --version
[2026-01-12 03:54:15] apptainer version 1.4.5-2.el9
[2026-01-12 03:54:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 03:54:15] c8-7-4.aglt2.org
[2026-01-12 03:54:15] apptainer works
[2026-01-12 03:54:15] Set ATHENA_PROC_NUMBER=11
[2026-01-12 03:54:15] Set ATHENA_CORE_NUMBER=11
[2026-01-12 03:54:15] Starting ATLAS job with PandaID=6966849221
[2026-01-12 03:54:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 13:06:31]  *** The last 200 lines of the pilot log: ***
[2026-01-12 13:06:31] 2026-01-12 18:05:26,275 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 13:06:31] 2026-01-12 18:05:27,622 | INFO     | PID=1410960 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 13:06:31] 2026-01-12 18:05:27,623 | INFO     | .. there are 28 such processes running
[2026-01-12 13:06:31] 2026-01-12 18:05:28,623 | INFO     | time since job start (33063s) is within the limit (349056.0s)
[2026-01-12 13:06:31] 2026-01-12 18:05:28,791 | INFO     | monitor loop #1996: job 0:6966849221 is in state 'finished'
[2026-01-12 13:06:31] 2026-01-12 18:05:28,792 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 13:06:31] 2026-01-12 18:05:30,630 | INFO     | time since job start (33065s) is within the limit (349056.0s)
[2026-01-12 13:06:31] 2026-01-12 18:05:31,309 | INFO     | monitor loop #1997: job 0:6966849221 is in state 'finished'
[2026-01-12 13:06:31] 2026-01-12 18:05:31,310 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 13:06:31] 2026-01-12 18:05:32,641 | INFO     | time since job start (33067s) is within the limit (349056.0s)
[2026-01-12 13:06:31] 2026-01-12 18:05:33,814 | INFO     | monitor loop #1998: job 0:6966849221 is in state 'finished'
[2026-01-12 13:06:31] 2026-01-12 18:05:33,815 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 13:06:31] 2026-01-12 18:05:34,647 | INFO     | time since job start (33069s) is within the limit (349056.0s)
[2026-01-12 13:06:31] 2026-01-12 18:05:36,320 | INFO     | monitor loop #1999: job 0:6966849221 is in state 'finished'
[2026-01-12 13:06:31] 2026-01-12 18:05:36,321 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 13:06:31] 2026-01-12 18:05:36,660 | INFO     | time since job start (33071s) is within the limit (349056.0s)
[2026-01-12 13:06:31] 2026-01-12 18:05:37,154 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-12 13:06:31] 2026-01-12 18:05:37,162 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9928359374994
[2026-01-12 13:06:31] 2026-01-12 18:05:37,196 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6966849221/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 13:06:31] 2026-01-12 18:05:37,197 | INFO     | extracted standard info from prmon json
[2026-01-12 13:06:31] 2026-01-12 18:05:37,197 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 13:06:31] 2026-01-12 18:05:37,197 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 13:06:31] 2026-01-12 18:05:37,228 | INFO     | fitting pss+swap vs Time
[2026-01-12 13:06:31] 2026-01-12 18:05:37,228 | INFO     | sum of square deviations: 49100797052.048225
[2026-01-12 13:06:31] 2026-01-12 18:05:37,244 | INFO     | sum of deviations: -713378651430.7819
[2026-01-12 13:06:31] 2026-01-12 18:05:37,244 | INFO     | mean x: 1768224566.5471349
[2026-01-12 13:06:31] 2026-01-12 18:05:37,244 | INFO     | mean y: 3843443.5600739373
[2026-01-12 13:06:31] 2026-01-12 18:05:37,244 | INFO     | intersect: 25694132246.266064
[2026-01-12 13:06:31] 2026-01-12 18:05:37,245 | INFO     | chi2: 25.809356196908023
[2026-01-12 13:06:31] 2026-01-12 18:05:37,245 | INFO     | sum of square deviations: 47752231124.08961
[2026-01-12 13:06:31] 2026-01-12 18:05:37,248 | INFO     | sum of deviations: -457763055246.7013
[2026-01-12 13:06:31] 2026-01-12 18:05:37,248 | INFO     | mean x: 1768224414.0597014
[2026-01-12 13:06:31] 2026-01-12 18:05:37,264 | INFO     | mean y: 3872339.2406716417
[2026-01-12 13:06:31] 2026-01-12 18:05:37,264 | INFO     | intersect: 16954448073.354263
[2026-01-12 13:06:31] 2026-01-12 18:05:37,264 | INFO     | chi2: 21.591369168394074
[2026-01-12 13:06:31] 2026-01-12 18:05:37,264 | INFO     | current chi2=21.591369168394074 (change=16.342860303579627 %)
[2026-01-12 13:06:31] 2026-01-12 18:05:37,264 | INFO     | right removable region: 535
[2026-01-12 13:06:31] 2026-01-12 18:05:37,264 | INFO     | sum of square deviations: 47751885075.43099
[2026-01-12 13:06:31] 2026-01-12 18:05:37,277 | INFO     | sum of deviations: -855881379467.9646
[2026-01-12 13:06:31] 2026-01-12 18:05:37,277 | INFO     | mean x: 1768224719.0541046
[2026-01-12 13:06:31] 2026-01-12 18:05:37,277 | INFO     | mean y: 3859491.688432836
[2026-01-12 13:06:31] 2026-01-12 18:05:37,277 | INFO     | intersect: 31696652548.18793
[2026-01-12 13:06:31] 2026-01-12 18:05:37,277 | INFO     | chi2: 24.338229519307394
[2026-01-12 13:06:31] 2026-01-12 18:05:37,277 | INFO     | current chi2=24.338229519307394 (change=5.699974328599764 %)
[2026-01-12 13:06:31] 2026-01-12 18:05:37,277 | INFO     | left removable region: 10
[2026-01-12 13:06:31] 2026-01-12 18:05:37,278 | INFO     | sum of square deviations: 44872192726.42668
[2026-01-12 13:06:31] 2026-01-12 18:05:37,293 | INFO     | sum of deviations: -580062358896.6266
[2026-01-12 13:06:31] 2026-01-12 18:05:37,293 | INFO     | mean x: 1768224688.5733333
[2026-01-12 13:06:31] 2026-01-12 18:05:37,293 | INFO     | mean y: 3897790.4838095238
[2026-01-12 13:06:31] 2026-01-12 18:05:37,293 | INFO     | intersect: 22861719563.67842
[2026-01-12 13:06:31] 2026-01-12 18:05:37,293 | INFO     | chi2: 19.307672222872444
[2026-01-12 13:06:31] 2026-01-12 18:05:37,294 | INFO     | current memory leak: -12.93 B/s (using 525 data points, chi2=19.31)
[2026-01-12 13:06:31] 2026-01-12 18:05:37,294 | INFO     | could have reported an average CPU frequency of 3795 MHz (21 samples)
[2026-01-12 13:06:31] 2026-01-12 18:05:37,294 | INFO     | ..............................
[2026-01-12 13:06:31] 2026-01-12 18:05:37,294 | INFO     | . Timing measurements:
[2026-01-12 13:06:31] 2026-01-12 18:05:37,294 | INFO     | . get job = 0 s
[2026-01-12 13:06:31] 2026-01-12 18:05:37,294 | INFO     | . initial setup = 2 s
[2026-01-12 13:06:31] 2026-01-12 18:05:37,294 | INFO     | . payload setup = 9 s
[2026-01-12 13:06:31] 2026-01-12 18:05:37,294 | INFO     | . stage-in = 0 s
[2026-01-12 13:06:31] 2026-01-12 18:05:37,294 | INFO     | . payload execution = 33001 s
[2026-01-12 13:06:31] 2026-01-12 18:05:37,294 | INFO     | . stage-out = 6 s
[2026-01-12 13:06:31] 2026-01-12 18:05:37,294 | INFO     | . log creation = 2 s
[2026-01-12 13:06:31] 2026-01-12 18:05:37,295 | INFO     | ..............................
[2026-01-12 13:06:31] 2026-01-12 18:05:37,606 | INFO     | 
[2026-01-12 13:06:31] 2026-01-12 18:05:37,631 | INFO     | job summary report
[2026-01-12 13:06:31] 2026-01-12 18:05:37,631 | INFO     | --------------------------------------------------
[2026-01-12 13:06:31] 2026-01-12 18:05:37,631 | INFO     | PanDA job id: 6966849221
[2026-01-12 13:06:31] 2026-01-12 18:05:37,631 | INFO     | task id: 48187943
[2026-01-12 13:06:31] 2026-01-12 18:05:37,631 | INFO     | errors: (none)
[2026-01-12 13:06:31] 2026-01-12 18:05:37,631 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 13:06:31] 2026-01-12 18:05:37,631 | INFO     | pilot state: finished 
[2026-01-12 13:06:31] 2026-01-12 18:05:37,631 | INFO     | transexitcode: 0
[2026-01-12 13:06:31] 2026-01-12 18:05:37,631 | INFO     | exeerrorcode: 0
[2026-01-12 13:06:31] 2026-01-12 18:05:37,631 | INFO     | exeerrordiag: 
[2026-01-12 13:06:31] 2026-01-12 18:05:37,631 | INFO     | exitcode: 0
[2026-01-12 13:06:31] 2026-01-12 18:05:37,632 | INFO     | exitmsg: OK
[2026-01-12 13:06:31] 2026-01-12 18:05:37,632 | INFO     | cpuconsumptiontime: 165337 s
[2026-01-12 13:06:31] 2026-01-12 18:05:37,632 | INFO     | nevents: 2050
[2026-01-12 13:06:31] 2026-01-12 18:05:37,632 | INFO     | neventsw: 0
[2026-01-12 13:06:31] 2026-01-12 18:05:37,632 | INFO     | pid: 1435195
[2026-01-12 13:06:31] 2026-01-12 18:05:37,632 | INFO     | pgrp: 1435195
[2026-01-12 13:06:31] 2026-01-12 18:05:37,632 | INFO     | corecount: 11
[2026-01-12 13:06:31] 2026-01-12 18:05:37,632 | INFO     | event service: False
[2026-01-12 13:06:31] 2026-01-12 18:05:37,632 | INFO     | sizes: {0: 2284619, 4: 2284881, 11: 2284909, 33014: 2344319, 33021: 2353317, 33024: 2353373, 33057: 2353747}
[2026-01-12 13:06:31] 2026-01-12 18:05:37,632 | INFO     | --------------------------------------------------
[2026-01-12 13:06:31] 2026-01-12 18:05:37,632 | INFO     | 
[2026-01-12 13:06:31] 2026-01-12 18:05:37,632 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-12 13:06:31] 2026-01-12 18:05:37,879 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 13:06:31] 2026-01-12 18:05:37,879 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 13:06:31] 2026-01-12 18:05:37,879 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 13:06:31] 2026-01-12 18:05:37,879 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 13:06:31] 2026-01-12 18:05:37,879 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 13:06:31] 2026-01-12 18:05:37,879 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 13:06:31] 2026-01-12 18:05:37,879 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 13:06:31] 2026-01-12 18:05:37,879 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 13:06:31] 2026-01-12 18:05:37,879 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 13:06:31] 2026-01-12 18:05:37,879 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 13:06:31] 2026-01-12 18:05:37,879 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 13:06:31] 2026-01-12 18:05:37,879 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 13:06:31] 2026-01-12 18:05:37,879 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 13:06:31] 2026-01-12 18:05:37,879 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 13:06:31] 2026-01-12 18:05:37,879 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 13:06:31] 2026-01-12 18:05:37,879 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 13:06:31] 2026-01-12 18:05:37,879 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 13:06:31] 2026-01-12 18:05:37,879 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 13:06:31] 2026-01-12 18:05:37,879 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 13:06:31] 2026-01-12 18:05:37,880 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 13:06:31] 2026-01-12 18:05:37,880 | INFO     | job 6966849221 has completed (purged errors)
[2026-01-12 13:06:31] 2026-01-12 18:05:37,880 | INFO     | overall cleanup function is called
[2026-01-12 13:06:31] 2026-01-12 18:05:38,921 | INFO     | --- collectZombieJob: --- 10, [1435195]
[2026-01-12 13:06:31] 2026-01-12 18:05:38,922 | INFO     | zombie collector waiting for pid 1435195
[2026-01-12 13:06:31] 2026-01-12 18:05:38,922 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 13:06:31] 2026-01-12 18:05:38,922 | INFO     | collected zombie processes
[2026-01-12 13:06:31] 2026-01-12 18:05:38,922 | INFO     | will attempt to kill all subprocesses of pid=1435195
[2026-01-12 13:06:31] 2026-01-12 18:05:41,785 | INFO     | process IDs to be killed: [1435195] (in reverse order)
[2026-01-12 13:06:31] 2026-01-12 18:05:42,221 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 13:06:31] 2026-01-12 18:05:42,221 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 13:06:31] 2026-01-12 18:05:42,316 | INFO     | did not find any defunct processes belonging to 1435195
[2026-01-12 13:06:31] 2026-01-12 18:05:42,714 | INFO     | did not find any defunct processes belonging to 1435195
[2026-01-12 13:06:31] 2026-01-12 18:05:42,820 | INFO     | ready for new job
[2026-01-12 13:06:31] 2026-01-12 18:05:42,820 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 13:06:31] 2026-01-12 18:05:42,822 | INFO     | ***************************************
[2026-01-12 13:06:31] 2026-01-12 18:05:42,822 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 13:06:31] 2026-01-12 18:05:42,822 | INFO     | ***************************************
[2026-01-12 13:06:31] 2026-01-12 18:05:42,822 | INFO     | 
[2026-01-12 13:06:31] 2026-01-12 18:05:42,896 | INFO     | architecture information:
[2026-01-12 13:06:31] 2026-01-12 18:05:42,960 | INFO     | executing command: cat /etc/os-release
[2026-01-12 13:06:31] 2026-01-12 18:05:43,049 | INFO     | cat /etc/os-release:
[2026-01-12 13:06:31] NAME="CentOS Linux"
[2026-01-12 13:06:31] VERSION="7 (Core)"
[2026-01-12 13:06:31] ID="centos"
[2026-01-12 13:06:31] ID_LIKE="rhel fedora"
[2026-01-12 13:06:31] VERSION_ID="7"
[2026-01-12 13:06:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 13:06:31] ANSI_COLOR="0;31"
[2026-01-12 13:06:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 13:06:31] HOME_URL="https://www.centos.org/"
[2026-01-12 13:06:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 13:06:31] 
[2026-01-12 13:06:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 13:06:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 13:06:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 13:06:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 13:06:31] 
[2026-01-12 13:06:31] 2026-01-12 18:05:43,050 | INFO     | ***************************************
[2026-01-12 13:06:31] 2026-01-12 18:05:43,554 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-12 13:06:31] 2026-01-12 18:05:43,598 | INFO     | sufficient remaining disk space (161829879808 B)
[2026-01-12 13:06:31] 2026-01-12 18:05:43,598 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 13:06:31] 2026-01-12 18:05:43,598 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 13:06:31] 2026-01-12 18:05:43,598 | INFO     | update_server=False
[2026-01-12 13:06:31] 2026-01-12 18:05:43,598 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 13:06:31] 2026-01-12 18:05:43,598 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 13:06:31] 2026-01-12 18:05:43,599 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 13:06:31] 2026-01-12 18:05:43,602 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 13:06:31] 2026-01-12 18:05:43,882 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-12 13:06:31] 2026-01-12 18:05:43,883 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-12 13:06:31] 2026-01-12 18:05:43,883 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 13:06:31] 2026-01-12 18:05:43,883 | INFO     | will abort loop
[2026-01-12 13:06:31] 2026-01-12 18:05:44,538 | INFO     | all job control threads have been joined
[2026-01-12 13:06:31] 2026-01-12 18:05:44,576 | INFO     | all data control threads have been joined
[2026-01-12 13:06:31] 2026-01-12 18:05:44,603 | INFO     | [job] retrieve thread has finished
[2026-01-12 13:06:31] 2026-01-12 18:05:44,604 | INFO     | [job] queue monitor thread has finished
[2026-01-12 13:06:31] 2026-01-12 18:05:44,868 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 13:06:31] 2026-01-12 18:05:44,869 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 13:06:31] 2026-01-12 18:05:44,882 | INFO     | [payload] failed_post thread has finished
[2026-01-12 13:06:31] 2026-01-12 18:05:44,888 | INFO     | [job] job monitor thread has finished
[2026-01-12 13:06:31] 2026-01-12 18:05:45,084 | INFO     | all payload control threads have been joined
[2026-01-12 13:06:31] 2026-01-12 18:05:45,291 | INFO     | [data] copytool_in thread has finished
[2026-01-12 13:06:31] 2026-01-12 18:05:45,544 | INFO     | [job] control thread has finished
[2026-01-12 13:06:31] 2026-01-12 18:05:45,582 | INFO     | [data] control thread has finished
[2026-01-12 13:06:31] 2026-01-12 18:05:45,606 | INFO     | [data] copytool_out thread has finished
[2026-01-12 13:06:31] 2026-01-12 18:05:45,826 | INFO     | [job] validate thread has finished
[2026-01-12 13:06:31] 2026-01-12 18:05:45,827 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 13:06:31] 2026-01-12 18:05:45,958 | INFO     | [payload] validate_post thread has finished
[2026-01-12 13:06:31] 2026-01-12 18:05:46,058 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 13:06:31] 2026-01-12 18:05:46,090 | INFO     | [payload] control thread has finished
[2026-01-12 13:06:31] 2026-01-12 18:05:47,614 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 13:06:31] 2026-01-12 18:06:12,284 | INFO     | PID=1410960 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 13:06:31] 2026-01-12 18:06:12,285 | INFO     | .. there are 28 such processes running
[2026-01-12 13:06:31] 2026-01-12 18:06:12,285 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 13:06:31] 2026-01-12 18:06:12,285 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 13:06:31] 2026-01-12 18:06:12,285 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 13:06:31] 2026-01-12 18:06:23,628 | INFO     | [monitor] cgroup control has ended
[2026-01-12 13:06:31] 2026-01-12 18:06:23,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140626641184576)>', '<ExcThread(monitor, started 140626012137216)>']
[2026-01-12 13:06:31] 2026-01-12 18:06:24,406 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 13:06:31] 2026-01-12 18:06:24,407 | INFO     | [monitor] control thread has ended
[2026-01-12 13:06:31] 2026-01-12 18:06:28,834 | INFO     | all workflow threads have been joined
[2026-01-12 13:06:31] 2026-01-12 18:06:28,835 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 13:06:31] 2026-01-12 18:06:28,835 | INFO     | traces error code: 0
[2026-01-12 13:06:31] 2026-01-12 18:06:28,835 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 13:06:31] 2026-01-12 18:06:29,443 [wrapper] ==== pilot stdout END ====
[2026-01-12 13:06:31] 2026-01-12 18:06:29,457 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 13:06:31] 2026-01-12 18:06:29,482 [wrapper] pilotpid: 1410960
[2026-01-12 13:06:31] 2026-01-12 18:06:29,503 [wrapper] Pilot exit status: 0
[2026-01-12 13:06:31] 2026-01-12 18:06:29,596 [wrapper] pandaids: 6966849221
[2026-01-12 13:06:31] 2026-01-12 18:06:30,338 [wrapper] cleanup supervisor_pilot 4187375 1410961
[2026-01-12 13:06:31] 2026-01-12 18:06:30,369 [wrapper] Test setup, not cleaning
[2026-01-12 13:06:31] 2026-01-12 18:06:30,393 [wrapper] apfmon messages muted
[2026-01-12 13:06:31] 2026-01-12 18:06:30,424 [wrapper] ==== wrapper stdout END ====
[2026-01-12 13:06:31] 2026-01-12 18:06:30,447 [wrapper] ==== wrapper stderr END ====
[2026-01-12 13:06:31]  *** Error codes and diagnostics ***
[2026-01-12 13:06:31]     "exeErrorCode": 0,
[2026-01-12 13:06:31]     "exeErrorDiag": "",
[2026-01-12 13:06:31]     "pilotErrorCode": 0,
[2026-01-12 13:06:31]     "pilotErrorDiag": "",
[2026-01-12 13:06:31]  *** Listing of results directory ***
[2026-01-12 13:06:31] total 1490740
[2026-01-12 13:06:31] -rwx------. 1 boincer umatlas      36322 Jan 12 03:50 runpilot2-wrapper.sh
[2026-01-12 13:06:31] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 03:50 queuedata.json
[2026-01-12 13:06:31] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 03:50 pilot3.tar.gz
[2026-01-12 13:06:31] -rw-r--r--. 1 boincer umatlas        100 Jan 12 03:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 13:06:31] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 03:54 run_atlas
[2026-01-12 13:06:31] -rw-r--r--. 1 boincer umatlas        105 Jan 12 03:54 job.xml
[2026-01-12 13:06:31] -rw-r--r--. 2 boincer umatlas  321975272 Jan 12 03:54 EVNT.48118027._000094.pool.root.1
[2026-01-12 13:06:31] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 03:54 start_atlas.sh
[2026-01-12 13:06:31] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 03:54 shared
[2026-01-12 13:06:31] -rw-r--r--. 2 boincer umatlas     592607 Jan 12 03:54 input.tar.gz
[2026-01-12 13:06:31] -rw-r--r--. 1 boincer umatlas          0 Jan 12 03:54 boinc_lockfile
[2026-01-12 13:06:31] -rw-r--r--. 1 boincer umatlas       2895 Jan 12 03:54 pandaJob.out
[2026-01-12 13:06:31] -rw-------. 1 boincer umatlas         57 Jan 12 03:54 setup.sh.local
[2026-01-12 13:06:31] -rw-------. 1 boincer umatlas     987688 Jan 12 03:54 agis_schedconf.cvmfs.json
[2026-01-12 13:06:31] drwx------. 5 boincer umatlas       4096 Jan 12 03:54 pilot3
[2026-01-12 13:06:31] -rw-r--r--. 1 boincer umatlas        533 Jan 12 12:34 boinc_task_state.xml
[2026-01-12 13:06:31] -rw-r--r--. 1 boincer umatlas       7174 Jan 12 13:00 init_data.xml
[2026-01-12 13:06:31] -rw-------. 1 boincer umatlas 1187238754 Jan 12 13:03 HITS.48187943._000457.pool.root.1
[2026-01-12 13:06:31] -rw-------. 1 boincer umatlas       1048 Jan 12 13:04 memory_monitor_summary.json
[2026-01-12 13:06:31] -rw-------. 1 boincer umatlas    1516240 Jan 12 13:04 agis_ddmendpoints.agis.ALL.json
[2026-01-12 13:06:31] -rw-------. 1 boincer umatlas    2456685 Jan 12 13:05 log.48187943._000457.job.log.tgz.1
[2026-01-12 13:06:31] -rw-------. 1 boincer umatlas         95 Jan 12 13:05 pilot_heartbeat.json
[2026-01-12 13:06:31] -rw-------. 1 boincer umatlas      27486 Jan 12 13:05 heartbeat.json
[2026-01-12 13:06:31] -rw-r--r--. 1 boincer umatlas       8192 Jan 12 13:06 boinc_mmap_file
[2026-01-12 13:06:31] -rw-r--r--. 1 boincer umatlas         29 Jan 12 13:06 wrapper_checkpoint.txt
[2026-01-12 13:06:31] -rw-------. 1 boincer umatlas       5011 Jan 12 13:06 pilotlog.txt
[2026-01-12 13:06:31] -rw-------. 1 boincer umatlas    4216181 Jan 12 13:06 log.48187943._000457.job.log.1
[2026-01-12 13:06:31] -rw-------. 1 boincer umatlas        353 Jan 12 13:06 output.list
[2026-01-12 13:06:31] -rw-r--r--. 1 boincer umatlas        620 Jan 12 13:06 runtime_log
[2026-01-12 13:06:31] -rw-------. 1 boincer umatlas    6707200 Jan 12 13:06 result.tar.gz
[2026-01-12 13:06:31] -rw-r--r--. 1 boincer umatlas       9335 Jan 12 13:06 runtime_log.err
[2026-01-12 13:06:31] -rw-------. 1 boincer umatlas        658 Jan 12 13:06 dr8LDmxnSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMEnKDmECbqJm.diag
[2026-01-12 13:06:31] -rw-r--r--. 1 boincer umatlas      21739 Jan 12 13:06 stderr.txt
[2026-01-12 13:06:31] HITS file was successfully produced:
[2026-01-12 13:06:31] -rw-------. 1 boincer umatlas 1187238754 Jan 12 13:03 shared/HITS.pool.root.1
[2026-01-12 13:06:31]  *** Contents of shared directory: ***
[2026-01-12 13:06:31] total 1481004
[2026-01-12 13:06:31] -rw-r--r--. 2 boincer umatlas  321975272 Jan 12 03:54 ATLAS.root_0
[2026-01-12 13:06:31] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 03:54 start_atlas.sh
[2026-01-12 13:06:31] -rw-r--r--. 2 boincer umatlas     592607 Jan 12 03:54 input.tar.gz
[2026-01-12 13:06:31] -rw-------. 1 boincer umatlas 1187238754 Jan 12 13:03 HITS.pool.root.1
[2026-01-12 13:06:31] -rw-------. 1 boincer umatlas    6707200 Jan 12 13:06 result.tar.gz
13:06:32 (1401264): run_atlas exited; CPU time 165842.433789
13:06:32 (1401264): called boinc_finish(0)

</stderr_txt>
]]>

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