Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:10:21 (782445): wrapper (7.7.26015): starting
04:10:21 (782445): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 04:10:21] Arguments: --nthreads 8
[2026-01-12 04:10:21] Threads: 8
[2026-01-12 04:10:21] Checking for CVMFS
[2026-01-12 04:10:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 04:10:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 04:10:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 04:10:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 04:10:22] 2.13.3.0 12500 97532 218140 155045 1 366 26497831 32503809 19037 16776704 0 504673090 99.475 674000225 35309 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 04:10:22] CVMFS is ok
[2026-01-12 04:10:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 04:10:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 04:10:22] Further information can be found at the LHC@home message board.
[2026-01-12 04:10:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 04:10:22] Checking for apptainer binary...
[2026-01-12 04:10:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 04:10:22] Running /usr/bin/apptainer --version
[2026-01-12 04:10:22] apptainer version 1.4.5-2.el9
[2026-01-12 04:10:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 04:10:23] c7-7-36.aglt2.org
[2026-01-12 04:10:23] apptainer works
[2026-01-12 04:10:23] Set ATHENA_PROC_NUMBER=8
[2026-01-12 04:10:23] Set ATHENA_CORE_NUMBER=8
[2026-01-12 04:10:23] Starting ATLAS job with PandaID=6966860475
[2026-01-12 04:10:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 16:00:58]  *** The last 200 lines of the pilot log: ***
[2026-01-12 16:00:58] 2026-01-12 20:59:48,079 | INFO     | extracted standard info from prmon json
[2026-01-12 16:00:58] 2026-01-12 20:59:48,080 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 16:00:58] 2026-01-12 20:59:48,080 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 16:00:58] 2026-01-12 20:59:48,137 | INFO     | fitting pss+swap vs Time
[2026-01-12 16:00:58] 2026-01-12 20:59:48,138 | INFO     | sum of square deviations: 104993854484.10336
[2026-01-12 16:00:58] 2026-01-12 20:59:48,208 | INFO     | sum of deviations: 1325094747825.785
[2026-01-12 16:00:58] 2026-01-12 20:59:48,208 | INFO     | mean x: 1768230301.964132
[2026-01-12 16:00:58] 2026-01-12 20:59:48,208 | INFO     | mean y: 3409018.991391679
[2026-01-12 16:00:58] 2026-01-12 20:59:48,208 | INFO     | intersect: -22312875087.27339
[2026-01-12 16:00:58] 2026-01-12 20:59:48,209 | INFO     | chi2: 10.817946830438864
[2026-01-12 16:00:58] 2026-01-12 20:59:48,210 | INFO     | sum of square deviations: 102750612724.42203
[2026-01-12 16:00:58] 2026-01-12 20:59:48,280 | INFO     | sum of deviations: 1586884783540.908
[2026-01-12 16:00:58] 2026-01-12 20:59:48,280 | INFO     | mean x: 1768230149.4710982
[2026-01-12 16:00:58] 2026-01-12 20:59:48,280 | INFO     | mean y: 3426806.5953757227
[2026-01-12 16:00:58] 2026-01-12 20:59:48,280 | INFO     | intersect: -27305193975.254417
[2026-01-12 16:00:58] 2026-01-12 20:59:48,281 | INFO     | chi2: 7.893415162382462
[2026-01-12 16:00:58] 2026-01-12 20:59:48,281 | INFO     | current chi2=7.893415162382462 (change=27.03407322938154 %)
[2026-01-12 16:00:58] 2026-01-12 20:59:48,282 | INFO     | sum of square deviations: 100539557614.67241
[2026-01-12 16:00:58] 2026-01-12 20:59:48,354 | INFO     | sum of deviations: 1620934621614.032
[2026-01-12 16:00:58] 2026-01-12 20:59:48,354 | INFO     | mean x: 1768229996.9781659
[2026-01-12 16:00:58] 2026-01-12 20:59:48,354 | INFO     | mean y: 3429142.135371179
[2026-01-12 16:00:58] 2026-01-12 20:59:48,354 | INFO     | intersect: -28504605795.3498
[2026-01-12 16:00:58] 2026-01-12 20:59:48,355 | INFO     | chi2: 7.697036124094554
[2026-01-12 16:00:58] 2026-01-12 20:59:48,355 | INFO     | current chi2=7.697036124094554 (change=2.4878843219065567 %)
[2026-01-12 16:00:58] 2026-01-12 20:59:48,355 | INFO     | right removable region: 686
[2026-01-12 16:00:58] 2026-01-12 20:59:48,356 | INFO     | sum of square deviations: 102750202804.422
[2026-01-12 16:00:58] 2026-01-12 20:59:48,427 | INFO     | sum of deviations: 1015034824873.1566
[2026-01-12 16:00:58] 2026-01-12 20:59:48,427 | INFO     | mean x: 1768230454.4710982
[2026-01-12 16:00:58] 2026-01-12 20:59:48,427 | INFO     | mean y: 3430086.5578034683
[2026-01-12 16:00:58] 2026-01-12 20:59:48,427 | INFO     | intersect: -17464326090.096775
[2026-01-12 16:00:58] 2026-01-12 20:59:48,428 | INFO     | chi2: 7.050943056897879
[2026-01-12 16:00:58] 2026-01-12 20:59:48,428 | INFO     | current chi2=7.050943056897879 (change=34.82179966850664 %)
[2026-01-12 16:00:58] 2026-01-12 20:59:48,429 | INFO     | sum of square deviations: 100538737774.67236
[2026-01-12 16:00:58] 2026-01-12 20:59:48,441 | INFO     | sum of deviations: 713726500441.2092
[2026-01-12 16:00:58] 2026-01-12 20:59:48,441 | INFO     | mean x: 1768230606.9781659
[2026-01-12 16:00:58] 2026-01-12 20:59:48,441 | INFO     | mean y: 3450857.5473071323
[2026-01-12 16:00:58] 2026-01-12 20:59:48,441 | INFO     | intersect: -12549253413.7161
[2026-01-12 16:00:58] 2026-01-12 20:59:48,442 | INFO     | chi2: 3.616796842190185
[2026-01-12 16:00:58] 2026-01-12 20:59:48,442 | INFO     | current chi2=3.616796842190185 (change=48.704778736627254 %)
[2026-01-12 16:00:58] 2026-01-12 20:59:48,442 | INFO     | sum of square deviations: 98359436004.17
[2026-01-12 16:00:58] 2026-01-12 20:59:48,454 | INFO     | sum of deviations: 631705247442.9232
[2026-01-12 16:00:58] 2026-01-12 20:59:48,454 | INFO     | mean x: 1768230759.478006
[2026-01-12 16:00:58] 2026-01-12 20:59:48,454 | INFO     | mean y: 3456586.0615835777
[2026-01-12 16:00:58] 2026-01-12 20:59:48,454 | INFO     | intersect: -11352857508.753742
[2026-01-12 16:00:58] 2026-01-12 20:59:48,455 | INFO     | chi2: 3.335493105813432
[2026-01-12 16:00:58] 2026-01-12 20:59:48,455 | INFO     | current chi2=3.335493105813432 (change=7.7777035495974145 %)
[2026-01-12 16:00:58] 2026-01-12 20:59:48,455 | INFO     | left removable region: 30
[2026-01-12 16:00:58] 2026-01-12 20:59:48,456 | INFO     | sum of square deviations: 87533885269.74254
[2026-01-12 16:00:58] 2026-01-12 20:59:48,464 | INFO     | sum of deviations: 836410753795.3645
[2026-01-12 16:00:58] 2026-01-12 20:59:48,464 | INFO     | mean x: 1768230881.480183
[2026-01-12 16:00:58] 2026-01-12 20:59:48,464 | INFO     | mean y: 3484496.2972560977
[2026-01-12 16:00:58] 2026-01-12 20:59:48,464 | INFO     | intersect: -16892456086.090097
[2026-01-12 16:00:58] 2026-01-12 20:59:48,465 | INFO     | chi2: 0.0908899658012728
[2026-01-12 16:00:58] 2026-01-12 20:59:48,465 | INFO     | current memory leak: 9.56 B/s (using 656 data points, chi2=0.09)
[2026-01-12 16:00:58] 2026-01-12 20:59:48,466 | INFO     | could have reported an average CPU frequency of 3192 MHz (27 samples)
[2026-01-12 16:00:58] 2026-01-12 20:59:48,466 | INFO     | ..............................
[2026-01-12 16:00:58] 2026-01-12 20:59:48,466 | INFO     | . Timing measurements:
[2026-01-12 16:00:58] 2026-01-12 20:59:48,466 | INFO     | . get job = 0 s
[2026-01-12 16:00:58] 2026-01-12 20:59:48,466 | INFO     | . initial setup = 2 s
[2026-01-12 16:00:58] 2026-01-12 20:59:48,466 | INFO     | . payload setup = 12 s
[2026-01-12 16:00:58] 2026-01-12 20:59:48,466 | INFO     | . stage-in = 0 s
[2026-01-12 16:00:58] 2026-01-12 20:59:48,466 | INFO     | . payload execution = 42503 s
[2026-01-12 16:00:58] 2026-01-12 20:59:48,466 | INFO     | . stage-out = 4 s
[2026-01-12 16:00:58] 2026-01-12 20:59:48,466 | INFO     | . log creation = 1 s
[2026-01-12 16:00:58] 2026-01-12 20:59:48,467 | INFO     | ..............................
[2026-01-12 16:00:58] 2026-01-12 20:59:48,542 | INFO     | 
[2026-01-12 16:00:58] 2026-01-12 20:59:48,543 | INFO     | job summary report
[2026-01-12 16:00:58] 2026-01-12 20:59:48,543 | INFO     | --------------------------------------------------
[2026-01-12 16:00:58] 2026-01-12 20:59:48,543 | INFO     | PanDA job id: 6966860475
[2026-01-12 16:00:58] 2026-01-12 20:59:48,543 | INFO     | task id: 48187943
[2026-01-12 16:00:58] 2026-01-12 20:59:48,543 | INFO     | errors: (none)
[2026-01-12 16:00:58] 2026-01-12 20:59:48,543 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 16:00:58] 2026-01-12 20:59:48,543 | INFO     | pilot state: finished 
[2026-01-12 16:00:58] 2026-01-12 20:59:48,543 | INFO     | transexitcode: 0
[2026-01-12 16:00:58] 2026-01-12 20:59:48,543 | INFO     | exeerrorcode: 0
[2026-01-12 16:00:58] 2026-01-12 20:59:48,543 | INFO     | exeerrordiag: 
[2026-01-12 16:00:58] 2026-01-12 20:59:48,543 | INFO     | exitcode: 0
[2026-01-12 16:00:58] 2026-01-12 20:59:48,543 | INFO     | exitmsg: OK
[2026-01-12 16:00:58] 2026-01-12 20:59:48,544 | INFO     | cpuconsumptiontime: 236673 s
[2026-01-12 16:00:58] 2026-01-12 20:59:48,544 | INFO     | nevents: 2050
[2026-01-12 16:00:58] 2026-01-12 20:59:48,544 | INFO     | neventsw: 0
[2026-01-12 16:00:58] 2026-01-12 20:59:48,544 | INFO     | pid: 793311
[2026-01-12 16:00:58] 2026-01-12 20:59:48,544 | INFO     | pgrp: 793311
[2026-01-12 16:00:58] 2026-01-12 20:59:48,544 | INFO     | corecount: 8
[2026-01-12 16:00:58] 2026-01-12 20:59:48,544 | INFO     | event service: False
[2026-01-12 16:00:58] 2026-01-12 20:59:48,544 | INFO     | sizes: {0: 2286983, 1: 2286983, 6: 2287305, 11: 2287333, 42520: 2352512, 42526: 2360582, 42534: 2360772}
[2026-01-12 16:00:58] 2026-01-12 20:59:48,544 | INFO     | --------------------------------------------------
[2026-01-12 16:00:58] 2026-01-12 20:59:48,544 | INFO     | 
[2026-01-12 16:00:58] 2026-01-12 20:59:48,544 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-12 16:00:58] 2026-01-12 20:59:48,612 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 16:00:58] 2026-01-12 20:59:48,612 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 16:00:58] 2026-01-12 20:59:48,612 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 16:00:58] 2026-01-12 20:59:48,612 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 16:00:58] 2026-01-12 20:59:48,613 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 16:00:58] 2026-01-12 20:59:48,613 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 16:00:58] 2026-01-12 20:59:48,613 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 16:00:58] 2026-01-12 20:59:48,613 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 16:00:58] 2026-01-12 20:59:48,613 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 16:00:58] 2026-01-12 20:59:48,613 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 16:00:58] 2026-01-12 20:59:48,613 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 16:00:58] 2026-01-12 20:59:48,613 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 16:00:58] 2026-01-12 20:59:48,613 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 16:00:58] 2026-01-12 20:59:48,613 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 16:00:58] 2026-01-12 20:59:48,613 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 16:00:58] 2026-01-12 20:59:48,613 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 16:00:58] 2026-01-12 20:59:48,613 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 16:00:58] 2026-01-12 20:59:48,614 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 16:00:58] 2026-01-12 20:59:48,614 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 16:00:58] 2026-01-12 20:59:48,614 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 16:00:58] 2026-01-12 20:59:48,614 | INFO     | job 6966860475 has completed (purged errors)
[2026-01-12 16:00:58] 2026-01-12 20:59:48,614 | INFO     | overall cleanup function is called
[2026-01-12 16:00:58] 2026-01-12 20:59:49,711 | INFO     | --- collectZombieJob: --- 10, [793311]
[2026-01-12 16:00:58] 2026-01-12 20:59:49,712 | INFO     | zombie collector waiting for pid 793311
[2026-01-12 16:00:58] 2026-01-12 20:59:49,712 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 16:00:58] 2026-01-12 20:59:49,712 | INFO     | collected zombie processes
[2026-01-12 16:00:58] 2026-01-12 20:59:49,712 | INFO     | will attempt to kill all subprocesses of pid=793311
[2026-01-12 16:00:58] 2026-01-12 20:59:50,327 | INFO     | process IDs to be killed: [793311] (in reverse order)
[2026-01-12 16:00:58] 2026-01-12 20:59:50,465 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 16:00:58] 2026-01-12 20:59:50,465 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 16:00:58] 2026-01-12 20:59:50,566 | INFO     | did not find any defunct processes belonging to 793311
[2026-01-12 16:00:58] 2026-01-12 20:59:50,669 | INFO     | did not find any defunct processes belonging to 793311
[2026-01-12 16:00:58] 2026-01-12 20:59:50,670 | INFO     | ready for new job
[2026-01-12 16:00:58] 2026-01-12 20:59:50,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 16:00:58] 2026-01-12 20:59:50,702 | INFO     | ***************************************
[2026-01-12 16:00:58] 2026-01-12 20:59:50,702 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 16:00:58] 2026-01-12 20:59:50,702 | INFO     | ***************************************
[2026-01-12 16:00:58] 2026-01-12 20:59:50,720 | INFO     | 
[2026-01-12 16:00:58] 2026-01-12 20:59:50,725 | INFO     | architecture information:
[2026-01-12 16:00:58] 2026-01-12 20:59:50,734 | INFO     | executing command: cat /etc/os-release
[2026-01-12 16:00:58] 2026-01-12 20:59:50,751 | INFO     | cat /etc/os-release:
[2026-01-12 16:00:58] NAME="CentOS Linux"
[2026-01-12 16:00:58] VERSION="7 (Core)"
[2026-01-12 16:00:58] ID="centos"
[2026-01-12 16:00:58] ID_LIKE="rhel fedora"
[2026-01-12 16:00:58] VERSION_ID="7"
[2026-01-12 16:00:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 16:00:58] ANSI_COLOR="0;31"
[2026-01-12 16:00:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 16:00:58] HOME_URL="https://www.centos.org/"
[2026-01-12 16:00:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 16:00:58] 
[2026-01-12 16:00:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 16:00:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 16:00:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 16:00:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 16:00:58] 
[2026-01-12 16:00:58] 2026-01-12 20:59:50,751 | INFO     | ***************************************
[2026-01-12 16:00:58] 2026-01-12 20:59:51,254 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-12 16:00:58] 2026-01-12 20:59:51,270 | INFO     | sufficient remaining disk space (90550829056 B)
[2026-01-12 16:00:58] 2026-01-12 20:59:51,271 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 16:00:58] 2026-01-12 20:59:51,271 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 16:00:58] 2026-01-12 20:59:51,271 | INFO     | update_server=False
[2026-01-12 16:00:58] 2026-01-12 20:59:51,271 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 16:00:58] 2026-01-12 20:59:51,271 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 16:00:58] 2026-01-12 20:59:51,271 | INFO     | aborting loop
[2026-01-12 16:00:58] 2026-01-12 20:59:51,271 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 16:00:58] 2026-01-12 20:59:51,272 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 16:00:58] 2026-01-12 20:59:51,456 | INFO     | all payload control threads have been joined
[2026-01-12 16:00:58] 2026-01-12 20:59:51,728 | INFO     | all data control threads have been joined
[2026-01-12 16:00:58] 2026-01-12 20:59:51,826 | INFO     | all job control threads have been joined
[2026-01-12 16:00:58] 2026-01-12 20:59:52,276 | INFO     | [job] retrieve thread has finished
[2026-01-12 16:00:58] 2026-01-12 20:59:52,277 | INFO     | [job] job monitor thread has finished
[2026-01-12 16:00:58] 2026-01-12 20:59:52,462 | INFO     | [payload] control thread has finished
[2026-01-12 16:00:58] 2026-01-12 20:59:52,734 | INFO     | [data] control thread has finished
[2026-01-12 16:00:58] 2026-01-12 20:59:52,740 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 16:00:58] 2026-01-12 20:59:52,741 | INFO     | [job] validate thread has finished
[2026-01-12 16:00:58] 2026-01-12 20:59:52,832 | INFO     | [job] control thread has finished
[2026-01-12 16:00:58] 2026-01-12 20:59:52,866 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 16:00:58] 2026-01-12 20:59:53,014 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 16:00:58] 2026-01-12 20:59:53,020 | INFO     | [payload] failed_post thread has finished
[2026-01-12 16:00:58] 2026-01-12 20:59:53,276 | INFO     | [data] copytool_out thread has finished
[2026-01-12 16:00:58] 2026-01-12 20:59:53,280 | INFO     | [payload] validate_post thread has finished
[2026-01-12 16:00:58] 2026-01-12 20:59:53,554 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 16:00:58] 2026-01-12 20:59:53,747 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 16:00:58] 2026-01-12 20:59:53,752 | INFO     | [data] copytool_in thread has finished
[2026-01-12 16:00:58] 2026-01-12 20:59:54,558 | INFO     | [job] queue monitor thread has finished
[2026-01-12 16:00:58] 2026-01-12 20:59:55,275 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 16:00:58] 2026-01-12 21:00:22,505 | INFO     | PID=786140 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-12 16:00:58] 2026-01-12 21:00:22,506 | INFO     | .. there are 17 such processes running
[2026-01-12 16:00:58] 2026-01-12 21:00:22,516 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 16:00:58] 2026-01-12 21:00:22,516 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 16:00:58] 2026-01-12 21:00:22,517 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 16:00:58] 2026-01-12 21:00:50,690 | INFO     | [monitor] cgroup control has ended
[2026-01-12 16:00:58] 2026-01-12 21:00:52,231 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139729024812864)>', '<ExcThread(monitor, started 139728665945856)>']
[2026-01-12 16:00:58] 2026-01-12 21:00:52,696 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 16:00:58] 2026-01-12 21:00:52,697 | INFO     | [monitor] control thread has ended
[2026-01-12 16:00:58] 2026-01-12 21:00:57,257 | INFO     | all workflow threads have been joined
[2026-01-12 16:00:58] 2026-01-12 21:00:57,257 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 16:00:58] 2026-01-12 21:00:57,258 | INFO     | traces error code: 0
[2026-01-12 16:00:58] 2026-01-12 21:00:57,258 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 16:00:58] 2026-01-12 21:00:57,986 [wrapper] ==== pilot stdout END ====
[2026-01-12 16:00:58] 2026-01-12 21:00:57,989 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 16:00:58] 2026-01-12 21:00:57,993 [wrapper] pilotpid: 786140
[2026-01-12 16:00:58] 2026-01-12 21:00:58,009 [wrapper] Pilot exit status: 0
[2026-01-12 16:00:58] 2026-01-12 21:00:58,075 [wrapper] pandaids: 6966860475
[2026-01-12 16:00:58] 2026-01-12 21:00:58,178 [wrapper] cleanup supervisor_pilot 2494089 786141
[2026-01-12 16:00:58] 2026-01-12 21:00:58,187 [wrapper] Test setup, not cleaning
[2026-01-12 16:00:58] 2026-01-12 21:00:58,198 [wrapper] apfmon messages muted
[2026-01-12 16:00:58] 2026-01-12 21:00:58,200 [wrapper] ==== wrapper stdout END ====
[2026-01-12 16:00:58] 2026-01-12 21:00:58,210 [wrapper] ==== wrapper stderr END ====
[2026-01-12 16:00:58]  *** Error codes and diagnostics ***
[2026-01-12 16:00:58]     "exeErrorCode": 0,
[2026-01-12 16:00:58]     "exeErrorDiag": "",
[2026-01-12 16:00:58]     "pilotErrorCode": 0,
[2026-01-12 16:00:58]     "pilotErrorDiag": "",
[2026-01-12 16:00:58]  *** Listing of results directory ***
[2026-01-12 16:00:58] total 1819284
[2026-01-12 16:00:58] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 03:50 pilot3.tar.gz
[2026-01-12 16:00:58] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 03:51 queuedata.json
[2026-01-12 16:00:58] -rwx------. 1 boincer umatlas      36322 Jan 12 03:51 runpilot2-wrapper.sh
[2026-01-12 16:00:58] -rw-r--r--. 1 boincer umatlas        100 Jan 12 04:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 16:00:58] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 04:10 run_atlas
[2026-01-12 16:00:58] -rw-r--r--. 1 boincer umatlas        105 Jan 12 04:10 job.xml
[2026-01-12 16:00:58] -rw-r--r--. 2 boincer umatlas  323575656 Jan 12 04:10 EVNT.48118027._000170.pool.root.1
[2026-01-12 16:00:58] -rw-r--r--. 2 boincer umatlas  323766841 Jan 12 04:10 EVNT.48118027._000171.pool.root.1
[2026-01-12 16:00:58] -rw-r--r--. 2 boincer umatlas      15897 Jan 12 04:10 start_atlas.sh
[2026-01-12 16:00:58] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 04:10 shared
[2026-01-12 16:00:58] -rw-r--r--. 2 boincer umatlas     592703 Jan 12 04:10 input.tar.gz
[2026-01-12 16:00:58] -rw-r--r--. 1 boincer umatlas          0 Jan 12 04:10 boinc_lockfile
[2026-01-12 16:00:58] -rw-r--r--. 1 boincer umatlas       3435 Jan 12 04:10 pandaJob.out
[2026-01-12 16:00:58] -rw-------. 1 boincer umatlas         57 Jan 12 04:10 setup.sh.local
[2026-01-12 16:00:58] -rw-------. 1 boincer umatlas     987688 Jan 12 04:10 agis_schedconf.cvmfs.json
[2026-01-12 16:00:58] drwx------. 5 boincer umatlas       4096 Jan 12 04:10 pilot3
[2026-01-12 16:00:58] -rw-r--r--. 1 boincer umatlas        533 Jan 12 15:50 boinc_task_state.xml
[2026-01-12 16:00:58] -rw-r--r--. 1 boincer umatlas       6946 Jan 12 15:55 init_data.xml
[2026-01-12 16:00:58] -rw-------. 1 boincer umatlas 1195858005 Jan 12 15:59 HITS.48187943._000830.pool.root.1
[2026-01-12 16:00:58] -rw-------. 1 boincer umatlas       1053 Jan 12 15:59 memory_monitor_summary.json
[2026-01-12 16:00:58] -rw-------. 1 boincer umatlas    1516240 Jan 12 15:59 agis_ddmendpoints.agis.ALL.json
[2026-01-12 16:00:58] -rw-------. 1 boincer umatlas    2299769 Jan 12 15:59 log.48187943._000830.job.log.tgz.1
[2026-01-12 16:00:58] -rw-------. 1 boincer umatlas      28334 Jan 12 15:59 heartbeat.json
[2026-01-12 16:00:58] -rw-------. 1 boincer umatlas         95 Jan 12 16:00 pilot_heartbeat.json
[2026-01-12 16:00:58] -rw-r--r--. 1 boincer umatlas       8192 Jan 12 16:00 boinc_mmap_file
[2026-01-12 16:00:58] -rw-r--r--. 1 boincer umatlas         29 Jan 12 16:00 wrapper_checkpoint.txt
[2026-01-12 16:00:58] -rw-------. 1 boincer umatlas       4823 Jan 12 16:00 pilotlog.txt
[2026-01-12 16:00:58] -rw-------. 1 boincer umatlas    5594946 Jan 12 16:00 log.48187943._000830.job.log.1
[2026-01-12 16:00:58] -rw-------. 1 boincer umatlas        353 Jan 12 16:00 output.list
[2026-01-12 16:00:58] -rw-r--r--. 1 boincer umatlas        620 Jan 12 16:00 runtime_log
[2026-01-12 16:00:58] -rw-------. 1 boincer umatlas    7936000 Jan 12 16:00 result.tar.gz
[2026-01-12 16:00:58] -rw-r--r--. 1 boincer umatlas       9390 Jan 12 16:00 runtime_log.err
[2026-01-12 16:00:58] -rw-------. 1 boincer umatlas        663 Jan 12 16:00 Py8MDm5oSz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwlhKDm9Lj7Gm.diag
[2026-01-12 16:00:58] -rw-r--r--. 1 boincer umatlas      20972 Jan 12 16:00 stderr.txt
[2026-01-12 16:00:58] HITS file was successfully produced:
[2026-01-12 16:00:58] -rw-------. 1 boincer umatlas 1195858005 Jan 12 15:59 shared/HITS.pool.root.1
[2026-01-12 16:00:58]  *** Contents of shared directory: ***
[2026-01-12 16:00:58] total 1808356
[2026-01-12 16:00:58] -rw-r--r--. 2 boincer umatlas  323575656 Jan 12 04:10 ATLAS.root_0
[2026-01-12 16:00:58] -rw-r--r--. 2 boincer umatlas  323766841 Jan 12 04:10 ATLAS.root_1
[2026-01-12 16:00:58] -rw-r--r--. 2 boincer umatlas      15897 Jan 12 04:10 start_atlas.sh
[2026-01-12 16:00:58] -rw-r--r--. 2 boincer umatlas     592703 Jan 12 04:10 input.tar.gz
[2026-01-12 16:00:58] -rw-------. 1 boincer umatlas 1195858005 Jan 12 15:59 HITS.pool.root.1
[2026-01-12 16:00:58] -rw-------. 1 boincer umatlas    7936000 Jan 12 16:00 result.tar.gz
16:00:59 (782445): run_atlas exited; CPU time 236444.337723
16:00:59 (782445): called boinc_finish(0)

</stderr_txt>
]]>

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