Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:57:44 (476681): wrapper (7.7.26015): starting
03:57:44 (476681): wrapper: running run_atlas (--nthreads 9)
[2026-01-12 03:57:44] Arguments: --nthreads 9
[2026-01-12 03:57:44] Threads: 9
[2026-01-12 03:57:44] Checking for CVMFS
[2026-01-12 03:57:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 03:57:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 03:57:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 03:57:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 03:57:45] 2.13.3.0 11285 97474 172024 155045 0 367 25273739 32935937 18105 16776704 0 541784699 99.542 695980115 37218 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 03:57:45] CVMFS is ok
[2026-01-12 03:57:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 03:57:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 03:57:45] Further information can be found at the LHC@home message board.
[2026-01-12 03:57:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 03:57:45] Checking for apptainer binary...
[2026-01-12 03:57:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 03:57:45] Running /usr/bin/apptainer --version
[2026-01-12 03:57:45] apptainer version 1.4.5-2.el9
[2026-01-12 03:57:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 03:57:45] c7-3-29.aglt2.org
[2026-01-12 03:57:45] apptainer works
[2026-01-12 03:57:45] Set ATHENA_PROC_NUMBER=9
[2026-01-12 03:57:45] Set ATHENA_CORE_NUMBER=9
[2026-01-12 03:57:45] Starting ATLAS job with PandaID=6966860553
[2026-01-12 03:57:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 01:21:21]  *** The last 200 lines of the pilot log: ***
[2026-01-13 01:21:21] 2026-01-13 06:20:40,798 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 01:21:21] 2026-01-13 06:20:41,765 | INFO     | time since job start (76958s) is within the limit (349056.0s)
[2026-01-13 01:21:21] 2026-01-13 06:20:42,852 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 01:21:21] 2026-01-13 06:20:42,858 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3228.7755833333317
[2026-01-13 01:21:21] 2026-01-13 06:20:42,871 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6966860553/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 01:21:21] 2026-01-13 06:20:42,872 | INFO     | extracted standard info from prmon json
[2026-01-13 01:21:21] 2026-01-13 06:20:42,872 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 01:21:21] 2026-01-13 06:20:42,872 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 01:21:21] 2026-01-13 06:20:42,887 | INFO     | fitting pss+swap vs Time
[2026-01-13 01:21:21] 2026-01-13 06:20:42,888 | INFO     | sum of square deviations: 621794684786.7733
[2026-01-13 01:21:21] 2026-01-13 06:20:42,917 | INFO     | sum of deviations: 4904655967106.337
[2026-01-13 01:21:21] 2026-01-13 06:20:42,917 | INFO     | mean x: 1768246769.95797
[2026-01-13 01:21:21] 2026-01-13 06:20:42,918 | INFO     | mean y: 3568099.7422680412
[2026-01-13 01:21:21] 2026-01-13 06:20:42,918 | INFO     | intersect: -13944190354.585623
[2026-01-13 01:21:21] 2026-01-13 06:20:42,919 | INFO     | chi2: 8.261777783915388
[2026-01-13 01:21:21] 2026-01-13 06:20:42,920 | INFO     | sum of square deviations: 614428676432.5254
[2026-01-13 01:21:21] 2026-01-13 06:20:42,950 | INFO     | sum of deviations: 5460648346846.615
[2026-01-13 01:21:21] 2026-01-13 06:20:42,950 | INFO     | mean x: 1768246617.4657643
[2026-01-13 01:21:21] 2026-01-13 06:20:42,950 | INFO     | mean y: 3579612.0143312104
[2026-01-13 01:21:21] 2026-01-13 06:20:42,950 | INFO     | intersect: -15711463221.833466
[2026-01-13 01:21:21] 2026-01-13 06:20:42,951 | INFO     | chi2: 4.790973636415804
[2026-01-13 01:21:21] 2026-01-13 06:20:42,951 | INFO     | current chi2=4.790973636415804 (change=42.01037885885518 %)
[2026-01-13 01:21:21] 2026-01-13 06:20:42,952 | INFO     | sum of square deviations: 607120781811.9049
[2026-01-13 01:21:21] 2026-01-13 06:20:42,982 | INFO     | sum of deviations: 5523996402037.409
[2026-01-13 01:21:21] 2026-01-13 06:20:42,982 | INFO     | mean x: 1768246464.9704237
[2026-01-13 01:21:21] 2026-01-13 06:20:42,982 | INFO     | mean y: 3580928.3892885693
[2026-01-13 01:21:21] 2026-01-13 06:20:42,982 | INFO     | intersect: -16085123993.324617
[2026-01-13 01:21:21] 2026-01-13 06:20:42,983 | INFO     | chi2: 4.512590960425252
[2026-01-13 01:21:21] 2026-01-13 06:20:42,984 | INFO     | current chi2=4.512590960425252 (change=5.810565808055963 %)
[2026-01-13 01:21:21] 2026-01-13 06:20:42,984 | INFO     | right removable region: 1250
[2026-01-13 01:21:21] 2026-01-13 06:20:42,985 | INFO     | sum of square deviations: 614427170342.5245
[2026-01-13 01:21:21] 2026-01-13 06:20:43,014 | INFO     | sum of deviations: 4342600605523.0874
[2026-01-13 01:21:21] 2026-01-13 06:20:43,014 | INFO     | mean x: 1768246922.4657643
[2026-01-13 01:21:21] 2026-01-13 06:20:43,014 | INFO     | mean y: 3579730.1998407645
[2026-01-13 01:21:21] 2026-01-13 06:20:43,014 | INFO     | intersect: -12493898452.500755
[2026-01-13 01:21:21] 2026-01-13 06:20:43,015 | INFO     | chi2: 4.924017270721765
[2026-01-13 01:21:21] 2026-01-13 06:20:43,016 | INFO     | current chi2=4.924017270721765 (change=40.400027699750176 %)
[2026-01-13 01:21:21] 2026-01-13 06:20:43,017 | INFO     | sum of square deviations: 607118228470.0206
[2026-01-13 01:21:21] 2026-01-13 06:20:43,045 | INFO     | sum of deviations: 4056156910760.6416
[2026-01-13 01:21:21] 2026-01-13 06:20:43,045 | INFO     | mean x: 1768247074.9720223
[2026-01-13 01:21:21] 2026-01-13 06:20:43,045 | INFO     | mean y: 3585702.2757793763
[2026-01-13 01:21:21] 2026-01-13 06:20:43,045 | INFO     | intersect: -11810073082.364426
[2026-01-13 01:21:21] 2026-01-13 06:20:43,046 | INFO     | chi2: 4.101541542320975
[2026-01-13 01:21:21] 2026-01-13 06:20:43,047 | INFO     | current chi2=4.101541542320975 (change=16.703347758165584 %)
[2026-01-13 01:21:21] 2026-01-13 06:20:43,047 | INFO     | left removable region: 20
[2026-01-13 01:21:21] 2026-01-13 06:20:43,048 | INFO     | sum of square deviations: 577056721279.3835
[2026-01-13 01:21:21] 2026-01-13 06:20:43,076 | INFO     | sum of deviations: 4437129153253.601
[2026-01-13 01:21:21] 2026-01-13 06:20:43,076 | INFO     | mean x: 1768247044.490244
[2026-01-13 01:21:21] 2026-01-13 06:20:43,076 | INFO     | mean y: 3603437.2162601626
[2026-01-13 01:21:21] 2026-01-13 06:20:43,077 | INFO     | intersect: -13592877154.61718
[2026-01-13 01:21:21] 2026-01-13 06:20:43,078 | INFO     | chi2: 0.22650954520481847
[2026-01-13 01:21:21] 2026-01-13 06:20:43,078 | INFO     | current memory leak: 7.69 B/s (using 1230 data points, chi2=0.23)
[2026-01-13 01:21:21] 2026-01-13 06:20:43,079 | INFO     | could have reported an average CPU frequency of 3194 MHz (46 samples)
[2026-01-13 01:21:21] 2026-01-13 06:20:43,079 | INFO     | ..............................
[2026-01-13 01:21:21] 2026-01-13 06:20:43,079 | INFO     | . Timing measurements:
[2026-01-13 01:21:21] 2026-01-13 06:20:43,079 | INFO     | . get job = 0 s
[2026-01-13 01:21:21] 2026-01-13 06:20:43,079 | INFO     | . initial setup = 2 s
[2026-01-13 01:21:21] 2026-01-13 06:20:43,079 | INFO     | . payload setup = 24 s
[2026-01-13 01:21:21] 2026-01-13 06:20:43,079 | INFO     | . stage-in = 0 s
[2026-01-13 01:21:21] 2026-01-13 06:20:43,079 | INFO     | . payload execution = 76899 s
[2026-01-13 01:21:21] 2026-01-13 06:20:43,079 | INFO     | . stage-out = 3 s
[2026-01-13 01:21:21] 2026-01-13 06:20:43,079 | INFO     | . log creation = 0 s
[2026-01-13 01:21:21] 2026-01-13 06:20:43,080 | INFO     | ..............................
[2026-01-13 01:21:21] 2026-01-13 06:20:43,404 | INFO     | 
[2026-01-13 01:21:21] 2026-01-13 06:20:43,404 | INFO     | job summary report
[2026-01-13 01:21:21] 2026-01-13 06:20:43,404 | INFO     | --------------------------------------------------
[2026-01-13 01:21:21] 2026-01-13 06:20:43,405 | INFO     | PanDA job id: 6966860553
[2026-01-13 01:21:21] 2026-01-13 06:20:43,405 | INFO     | task id: 48187943
[2026-01-13 01:21:21] 2026-01-13 06:20:43,405 | INFO     | errors: (none)
[2026-01-13 01:21:21] 2026-01-13 06:20:43,405 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 01:21:21] 2026-01-13 06:20:43,405 | INFO     | pilot state: finished 
[2026-01-13 01:21:21] 2026-01-13 06:20:43,405 | INFO     | transexitcode: 0
[2026-01-13 01:21:21] 2026-01-13 06:20:43,405 | INFO     | exeerrorcode: 0
[2026-01-13 01:21:21] 2026-01-13 06:20:43,405 | INFO     | exeerrordiag: 
[2026-01-13 01:21:21] 2026-01-13 06:20:43,405 | INFO     | exitcode: 0
[2026-01-13 01:21:21] 2026-01-13 06:20:43,405 | INFO     | exitmsg: OK
[2026-01-13 01:21:21] 2026-01-13 06:20:43,405 | INFO     | cpuconsumptiontime: 241035 s
[2026-01-13 01:21:21] 2026-01-13 06:20:43,405 | INFO     | nevents: 2050
[2026-01-13 01:21:21] 2026-01-13 06:20:43,405 | INFO     | neventsw: 0
[2026-01-13 01:21:21] 2026-01-13 06:20:43,405 | INFO     | pid: 488290
[2026-01-13 01:21:21] 2026-01-13 06:20:43,405 | INFO     | pgrp: 488290
[2026-01-13 01:21:21] 2026-01-13 06:20:43,405 | INFO     | corecount: 9
[2026-01-13 01:21:21] 2026-01-13 06:20:43,405 | INFO     | event service: False
[2026-01-13 01:21:21] 2026-01-13 06:20:43,406 | INFO     | sizes: {0: 2286812, 1: 2287011, 8: 2287305, 12: 2287333, 76926: 2368117, 76927: 2368116, 76931: 2376186, 76934: 2376242, 76939: 2376488}
[2026-01-13 01:21:21] 2026-01-13 06:20:43,406 | INFO     | --------------------------------------------------
[2026-01-13 01:21:21] 2026-01-13 06:20:43,406 | INFO     | 
[2026-01-13 01:21:21] 2026-01-13 06:20:43,406 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-13 01:21:21] 2026-01-13 06:20:43,426 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 01:21:21] 2026-01-13 06:20:43,427 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 01:21:21] 2026-01-13 06:20:43,427 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 01:21:21] 2026-01-13 06:20:43,427 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 01:21:21] 2026-01-13 06:20:43,427 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 01:21:21] 2026-01-13 06:20:43,427 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 01:21:21] 2026-01-13 06:20:43,427 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 01:21:21] 2026-01-13 06:20:43,427 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 01:21:21] 2026-01-13 06:20:43,427 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 01:21:21] 2026-01-13 06:20:43,427 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 01:21:21] 2026-01-13 06:20:43,427 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 01:21:21] 2026-01-13 06:20:43,427 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 01:21:21] 2026-01-13 06:20:43,428 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 01:21:21] 2026-01-13 06:20:43,428 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 01:21:21] 2026-01-13 06:20:43,428 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 01:21:21] 2026-01-13 06:20:43,428 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 01:21:21] 2026-01-13 06:20:43,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 01:21:21] 2026-01-13 06:20:43,428 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 01:21:21] 2026-01-13 06:20:43,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 01:21:21] 2026-01-13 06:20:43,428 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 01:21:21] 2026-01-13 06:20:43,428 | INFO     | job 6966860553 has completed (purged errors)
[2026-01-13 01:21:21] 2026-01-13 06:20:43,428 | INFO     | overall cleanup function is called
[2026-01-13 01:21:21] 2026-01-13 06:20:44,444 | INFO     | --- collectZombieJob: --- 10, [488290]
[2026-01-13 01:21:21] 2026-01-13 06:20:44,445 | INFO     | zombie collector waiting for pid 488290
[2026-01-13 01:21:21] 2026-01-13 06:20:44,445 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 01:21:21] 2026-01-13 06:20:44,445 | INFO     | collected zombie processes
[2026-01-13 01:21:21] 2026-01-13 06:20:44,445 | INFO     | will attempt to kill all subprocesses of pid=488290
[2026-01-13 01:21:21] 2026-01-13 06:20:44,979 | INFO     | process IDs to be killed: [488290] (in reverse order)
[2026-01-13 01:21:21] 2026-01-13 06:20:45,160 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 01:21:21] 2026-01-13 06:20:45,160 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 01:21:21] 2026-01-13 06:20:45,182 | INFO     | did not find any defunct processes belonging to 488290
[2026-01-13 01:21:21] 2026-01-13 06:20:45,204 | INFO     | did not find any defunct processes belonging to 488290
[2026-01-13 01:21:21] 2026-01-13 06:20:45,205 | INFO     | ready for new job
[2026-01-13 01:21:21] 2026-01-13 06:20:45,205 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 01:21:21] 2026-01-13 06:20:45,210 | INFO     | ***************************************
[2026-01-13 01:21:21] 2026-01-13 06:20:45,210 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 01:21:21] 2026-01-13 06:20:45,210 | INFO     | ***************************************
[2026-01-13 01:21:21] 2026-01-13 06:20:45,210 | INFO     | 
[2026-01-13 01:21:21] 2026-01-13 06:20:45,215 | INFO     | architecture information:
[2026-01-13 01:21:21] 2026-01-13 06:20:45,216 | INFO     | executing command: cat /etc/os-release
[2026-01-13 01:21:21] 2026-01-13 06:20:45,232 | INFO     | cat /etc/os-release:
[2026-01-13 01:21:21] NAME="CentOS Linux"
[2026-01-13 01:21:21] VERSION="7 (Core)"
[2026-01-13 01:21:21] ID="centos"
[2026-01-13 01:21:21] ID_LIKE="rhel fedora"
[2026-01-13 01:21:21] VERSION_ID="7"
[2026-01-13 01:21:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 01:21:21] ANSI_COLOR="0;31"
[2026-01-13 01:21:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 01:21:21] HOME_URL="https://www.centos.org/"
[2026-01-13 01:21:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 01:21:21] 
[2026-01-13 01:21:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 01:21:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 01:21:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 01:21:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 01:21:21] 
[2026-01-13 01:21:21] 2026-01-13 06:20:45,233 | INFO     | ***************************************
[2026-01-13 01:21:21] 2026-01-13 06:20:45,733 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-13 01:21:21] 2026-01-13 06:20:45,751 | INFO     | sufficient remaining disk space (74724671488 B)
[2026-01-13 01:21:21] 2026-01-13 06:20:45,752 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 01:21:21] 2026-01-13 06:20:45,752 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 01:21:21] 2026-01-13 06:20:45,752 | INFO     | update_server=False
[2026-01-13 01:21:21] 2026-01-13 06:20:45,752 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 01:21:21] 2026-01-13 06:20:45,809 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 01:21:21] 2026-01-13 06:20:45,809 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 01:21:21] 2026-01-13 06:20:45,809 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 01:21:21] 2026-01-13 06:20:45,809 | INFO     | will abort loop
[2026-01-13 01:21:21] 2026-01-13 06:20:45,906 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 01:21:21] 2026-01-13 06:20:46,495 | INFO     | all data control threads have been joined
[2026-01-13 01:21:21] 2026-01-13 06:20:46,756 | INFO     | [job] retrieve thread has finished
[2026-01-13 01:21:21] 2026-01-13 06:20:46,815 | INFO     | [job] job monitor thread has finished
[2026-01-13 01:21:21] 2026-01-13 06:20:46,894 | INFO     | all job control threads have been joined
[2026-01-13 01:21:21] 2026-01-13 06:20:46,900 | INFO     | all payload control threads have been joined
[2026-01-13 01:21:21] 2026-01-13 06:20:47,036 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 01:21:21] 2026-01-13 06:20:47,061 | INFO     | [data] copytool_in thread has finished
[2026-01-13 01:21:21] 2026-01-13 06:20:47,294 | INFO     | [payload] failed_post thread has finished
[2026-01-13 01:21:21] 2026-01-13 06:20:47,378 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 01:21:21] 2026-01-13 06:20:47,500 | INFO     | [data] control thread has finished
[2026-01-13 01:21:21] 2026-01-13 06:20:47,717 | INFO     | [payload] validate_post thread has finished
[2026-01-13 01:21:21] 2026-01-13 06:20:47,899 | INFO     | [job] validate thread has finished
[2026-01-13 01:21:21] 2026-01-13 06:20:47,901 | INFO     | [job] control thread has finished
[2026-01-13 01:21:21] 2026-01-13 06:20:47,906 | INFO     | [payload] control thread has finished
[2026-01-13 01:21:21] 2026-01-13 06:20:47,912 | INFO     | [data] copytool_out thread has finished
[2026-01-13 01:21:21] 2026-01-13 06:20:47,987 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 01:21:21] 2026-01-13 06:20:48,070 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 01:21:21] 2026-01-13 06:20:48,164 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 01:21:21] 2026-01-13 06:20:48,760 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 01:21:21] 2026-01-13 06:20:49,169 | INFO     | [job] queue monitor thread has finished
[2026-01-13 01:21:21] 2026-01-13 06:20:52,772 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 01:21:21] 2026-01-13 06:21:15,302 | INFO     | [monitor] cgroup control has ended
[2026-01-13 01:21:21] 2026-01-13 06:21:15,504 | INFO     | PID=480435 has CPU usage=9.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 01:21:21] 2026-01-13 06:21:15,505 | INFO     | .. there are 31 such processes running
[2026-01-13 01:21:21] 2026-01-13 06:21:15,505 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 01:21:21] 2026-01-13 06:21:15,505 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 01:21:21] 2026-01-13 06:21:15,505 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 01:21:21] 2026-01-13 06:21:16,107 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139860596709184)>', '<ExcThread(monitor, started 139859947669248)>']
[2026-01-13 01:21:21] 2026-01-13 06:21:16,510 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 01:21:21] 2026-01-13 06:21:16,510 | INFO     | [monitor] control thread has ended
[2026-01-13 01:21:21] 2026-01-13 06:21:21,133 | INFO     | all workflow threads have been joined
[2026-01-13 01:21:21] 2026-01-13 06:21:21,133 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 01:21:21] 2026-01-13 06:21:21,133 | INFO     | traces error code: 0
[2026-01-13 01:21:21] 2026-01-13 06:21:21,133 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 01:21:21] 2026-01-13 06:21:21,248 [wrapper] ==== pilot stdout END ====
[2026-01-13 01:21:21] 2026-01-13 06:21:21,254 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 01:21:21] 2026-01-13 06:21:21,257 [wrapper] pilotpid: 480435
[2026-01-13 01:21:21] 2026-01-13 06:21:21,259 [wrapper] Pilot exit status: 0
[2026-01-13 01:21:21] 2026-01-13 06:21:21,270 [wrapper] pandaids: 6966860553
[2026-01-13 01:21:21] 2026-01-13 06:21:21,379 [wrapper] cleanup supervisor_pilot 1858950 480436
[2026-01-13 01:21:21] 2026-01-13 06:21:21,381 [wrapper] Test setup, not cleaning
[2026-01-13 01:21:21] 2026-01-13 06:21:21,384 [wrapper] apfmon messages muted
[2026-01-13 01:21:21] 2026-01-13 06:21:21,387 [wrapper] ==== wrapper stdout END ====
[2026-01-13 01:21:21] 2026-01-13 06:21:21,392 [wrapper] ==== wrapper stderr END ====
[2026-01-13 01:21:21]  *** Error codes and diagnostics ***
[2026-01-13 01:21:21]     "exeErrorCode": 0,
[2026-01-13 01:21:21]     "exeErrorDiag": "",
[2026-01-13 01:21:21]     "pilotErrorCode": 0,
[2026-01-13 01:21:21]     "pilotErrorDiag": "",
[2026-01-13 01:21:21]  *** Listing of results directory ***
[2026-01-13 01:21:21] total 1810248
[2026-01-13 01:21:21] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 03:50 pilot3.tar.gz
[2026-01-13 01:21:21] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 03:51 queuedata.json
[2026-01-13 01:21:21] -rwx------. 1 boincer umatlas      36322 Jan 12 03:51 runpilot2-wrapper.sh
[2026-01-13 01:21:21] -rw-r--r--. 1 boincer umatlas        100 Jan 12 03:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 01:21:21] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 03:57 run_atlas
[2026-01-13 01:21:21] -rw-r--r--. 1 boincer umatlas        105 Jan 12 03:57 job.xml
[2026-01-13 01:21:21] -rw-r--r--. 2 boincer umatlas  319236279 Jan 12 03:57 EVNT.48118027._000176.pool.root.1
[2026-01-13 01:21:21] -rw-r--r--. 2 boincer umatlas  322436544 Jan 12 03:57 EVNT.48118027._000177.pool.root.1
[2026-01-13 01:21:21] -rw-r--r--. 2 boincer umatlas      15897 Jan 12 03:57 start_atlas.sh
[2026-01-13 01:21:21] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 03:57 shared
[2026-01-13 01:21:21] -rw-r--r--. 2 boincer umatlas     592707 Jan 12 03:57 input.tar.gz
[2026-01-13 01:21:21] -rw-r--r--. 1 boincer umatlas          0 Jan 12 03:57 boinc_lockfile
[2026-01-13 01:21:21] -rw-r--r--. 1 boincer umatlas       3435 Jan 12 03:57 pandaJob.out
[2026-01-13 01:21:21] -rw-------. 1 boincer umatlas         57 Jan 12 03:57 setup.sh.local
[2026-01-13 01:21:21] -rw-------. 1 boincer umatlas     987688 Jan 12 03:58 agis_schedconf.cvmfs.json
[2026-01-13 01:21:21] drwx------. 5 boincer umatlas       4096 Jan 12 03:58 pilot3
[2026-01-13 01:21:21] -rw-r--r--. 1 boincer umatlas        533 Jan 13 01:12 boinc_task_state.xml
[2026-01-13 01:21:21] -rw-------. 1 boincer umatlas 1182392375 Jan 13 01:20 HITS.48187943._000859.pool.root.1
[2026-01-13 01:21:21] -rw-------. 1 boincer umatlas       1070 Jan 13 01:20 memory_monitor_summary.json
[2026-01-13 01:21:21] -rw-------. 1 boincer umatlas    1516240 Jan 13 01:20 agis_ddmendpoints.agis.ALL.json
[2026-01-13 01:21:21] -rw-------. 1 boincer umatlas    2831712 Jan 13 01:20 log.48187943._000859.job.log.tgz.1
[2026-01-13 01:21:21] -rw-------. 1 boincer umatlas         95 Jan 13 01:20 pilot_heartbeat.json
[2026-01-13 01:21:21] -rw-------. 1 boincer umatlas      28301 Jan 13 01:20 heartbeat.json
[2026-01-13 01:21:21] -rw-r--r--. 1 boincer umatlas       6947 Jan 13 01:20 init_data.xml
[2026-01-13 01:21:21] -rw-r--r--. 1 boincer umatlas       8192 Jan 13 01:21 boinc_mmap_file
[2026-01-13 01:21:21] -rw-r--r--. 1 boincer umatlas         29 Jan 13 01:21 wrapper_checkpoint.txt
[2026-01-13 01:21:21] -rw-------. 1 boincer umatlas       5009 Jan 13 01:21 pilotlog.txt
[2026-01-13 01:21:21] -rw-------. 1 boincer umatlas    9995572 Jan 13 01:21 log.48187943._000859.job.log.1
[2026-01-13 01:21:21] -rw-------. 1 boincer umatlas        353 Jan 13 01:21 output.list
[2026-01-13 01:21:21] -rw-r--r--. 1 boincer umatlas        620 Jan 13 01:21 runtime_log
[2026-01-13 01:21:21] -rw-------. 1 boincer umatlas   12871680 Jan 13 01:21 result.tar.gz
[2026-01-13 01:21:21] -rw-r--r--. 1 boincer umatlas       9390 Jan 13 01:21 runtime_log.err
[2026-01-13 01:21:21] -rw-------. 1 boincer umatlas        665 Jan 13 01:21 fBNNDm5oSz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5lhKDmmWu6Qn.diag
[2026-01-13 01:21:21] -rw-r--r--. 1 boincer umatlas      21235 Jan 13 01:21 stderr.txt
[2026-01-13 01:21:21] HITS file was successfully produced:
[2026-01-13 01:21:21] -rw-------. 1 boincer umatlas 1182392375 Jan 13 01:20 shared/HITS.pool.root.1
[2026-01-13 01:21:21]  *** Contents of shared directory: ***
[2026-01-13 01:21:21] total 1794500
[2026-01-13 01:21:21] -rw-r--r--. 2 boincer umatlas  319236279 Jan 12 03:57 ATLAS.root_0
[2026-01-13 01:21:21] -rw-r--r--. 2 boincer umatlas  322436544 Jan 12 03:57 ATLAS.root_1
[2026-01-13 01:21:21] -rw-r--r--. 2 boincer umatlas      15897 Jan 12 03:57 start_atlas.sh
[2026-01-13 01:21:21] -rw-r--r--. 2 boincer umatlas     592707 Jan 12 03:57 input.tar.gz
[2026-01-13 01:21:21] -rw-------. 1 boincer umatlas 1182392375 Jan 13 01:20 HITS.pool.root.1
[2026-01-13 01:21:21] -rw-------. 1 boincer umatlas   12871680 Jan 13 01:21 result.tar.gz
01:21:22 (476681): run_atlas exited; CPU time 240702.295582
01:21:22 (476681): called boinc_finish(0)

</stderr_txt>
]]>

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