Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:55:43 (445898): wrapper (7.7.26015): starting
03:55:43 (445898): wrapper: running run_atlas (--nthreads 9)
[2026-01-12 03:55:43] Arguments: --nthreads 9
[2026-01-12 03:55:43] Threads: 9
[2026-01-12 03:55:43] Checking for CVMFS
[2026-01-12 03:55:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 03:55:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 03:55:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 03:55:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 03:55:44] 2.13.3.0 7554 26985 218216 155045 0 104 27680916 40960001 16451 16776704 0 54612427 99.632 51217702 40063 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 03:55:44] CVMFS is ok
[2026-01-12 03:55:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 03:55:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 03:55:44] Further information can be found at the LHC@home message board.
[2026-01-12 03:55:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 03:55:44] Checking for apptainer binary...
[2026-01-12 03:55:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 03:55:44] Running /usr/bin/apptainer --version
[2026-01-12 03:55:44] apptainer version 1.4.5-2.el9
[2026-01-12 03:55:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 03:55:44] c-212-7.aglt2.org
[2026-01-12 03:55:44] apptainer works
[2026-01-12 03:55:44] Set ATHENA_PROC_NUMBER=9
[2026-01-12 03:55:44] Set ATHENA_CORE_NUMBER=9
[2026-01-12 03:55:44] Starting ATLAS job with PandaID=6966844295
[2026-01-12 03:55:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 08:57:16]  *** The last 200 lines of the pilot log: ***
[2026-01-13 08:57:16] 2026-01-13 13:56:37,346 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-13 08:57:16] 2026-01-13 13:56:38,305 | INFO     | job 6966844295 has state=finished
[2026-01-13 08:57:16] 2026-01-13 13:56:38,306 | INFO     | preparing for final server update for job 6966844295 in state='finished'
[2026-01-13 08:57:16] 2026-01-13 13:56:38,306 | INFO     | this job has now completed (state=finished)
[2026-01-13 08:57:16] 2026-01-13 13:56:38,306 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-13 08:57:16] 2026-01-13 13:56:38,306 | INFO     | log transfer has been attempted: DONE
[2026-01-13 08:57:16] 2026-01-13 13:56:38,306 | INFO     | job 6966844295 has finished - writing final server update
[2026-01-13 08:57:16] 2026-01-13 13:56:38,307 | INFO     | total number of processed events: 2050 (read)
[2026-01-13 08:57:16] 2026-01-13 13:56:38,307 | INFO     | executing command: lscpu
[2026-01-13 08:57:16] 2026-01-13 13:56:38,375 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 08:57:16] 2026-01-13 13:56:38,540 | INFO     | time since job start (104440s) is within the limit (349056.0s)
[2026-01-13 08:57:16] 2026-01-13 13:56:38,797 | INFO     | monitor loop #5996: job 0:6966844295 is in state 'finished'
[2026-01-13 08:57:16] 2026-01-13 13:56:38,797 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 08:57:16] 2026-01-13 13:56:40,547 | INFO     | time since job start (104442s) is within the limit (349056.0s)
[2026-01-13 08:57:16] 2026-01-13 13:56:40,547 | INFO     | 104445s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-13 08:57:16] 2026-01-13 13:56:41,301 | INFO     | monitor loop #5997: job 0:6966844295 is in state 'finished'
[2026-01-13 08:57:16] 2026-01-13 13:56:41,302 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 08:57:16] 2026-01-13 13:56:42,553 | INFO     | time since job start (104444s) is within the limit (349056.0s)
[2026-01-13 08:57:16] 2026-01-13 13:56:43,406 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-13 08:57:16] 2026-01-13 13:56:43,412 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3143.586645833333
[2026-01-13 08:57:16] 2026-01-13 13:56:43,427 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966844295/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 08:57:16] 2026-01-13 13:56:43,427 | INFO     | extracted standard info from prmon json
[2026-01-13 08:57:16] 2026-01-13 13:56:43,427 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 08:57:16] 2026-01-13 13:56:43,428 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 08:57:16] 2026-01-13 13:56:43,450 | INFO     | fitting pss+swap vs Time
[2026-01-13 08:57:16] 2026-01-13 13:56:43,452 | INFO     | sum of square deviations: 1555855934374.907
[2026-01-13 08:57:16] 2026-01-13 13:56:43,505 | INFO     | sum of deviations: 45260311405732.914
[2026-01-13 08:57:16] 2026-01-13 13:56:43,505 | INFO     | mean x: 1768260382.6471963
[2026-01-13 08:57:16] 2026-01-13 13:56:43,505 | INFO     | mean y: 5329080.688668224
[2026-01-13 08:57:16] 2026-01-13 13:56:43,505 | INFO     | intersect: -51433890834.73804
[2026-01-13 08:57:16] 2026-01-13 13:56:43,507 | INFO     | chi2: 39.75176030105809
[2026-01-13 08:57:16] 2026-01-13 13:56:43,508 | INFO     | sum of square deviations: 1542264801875.2393
[2026-01-13 08:57:16] 2026-01-13 13:56:43,561 | INFO     | sum of deviations: 46358153562091.3
[2026-01-13 08:57:16] 2026-01-13 13:56:43,561 | INFO     | mean x: 1768260230.1564147
[2026-01-13 08:57:16] 2026-01-13 13:56:43,561 | INFO     | mean y: 5341395.875219684
[2026-01-13 08:57:16] 2026-01-13 13:56:43,561 | INFO     | intersect: -53145893844.440636
[2026-01-13 08:57:16] 2026-01-13 13:56:43,563 | INFO     | chi2: 35.64959591338137
[2026-01-13 08:57:16] 2026-01-13 13:56:43,563 | INFO     | current chi2=35.64959591338137 (change=10.319453419444002 %)
[2026-01-13 08:57:16] 2026-01-13 13:56:43,563 | INFO     | right removable region: 1706
[2026-01-13 08:57:16] 2026-01-13 13:56:43,564 | INFO     | sum of square deviations: 1542261619388.5488
[2026-01-13 08:57:16] 2026-01-13 13:56:43,619 | INFO     | sum of deviations: 44205747511453.805
[2026-01-13 08:57:16] 2026-01-13 13:56:43,619 | INFO     | mean x: 1768260535.155829
[2026-01-13 08:57:16] 2026-01-13 13:56:43,619 | INFO     | mean y: 5340906.692442882
[2026-01-13 08:57:16] 2026-01-13 13:56:43,619 | INFO     | intersect: -50678199271.502014
[2026-01-13 08:57:16] 2026-01-13 13:56:43,621 | INFO     | chi2: 37.30794535279511
[2026-01-13 08:57:16] 2026-01-13 13:56:43,621 | INFO     | current chi2=37.30794535279511 (change=6.147689887831041 %)
[2026-01-13 08:57:16] 2026-01-13 13:56:43,621 | INFO     | left removable region: 10
[2026-01-13 08:57:16] 2026-01-13 13:56:43,622 | INFO     | sum of square deviations: 1512638234759.4314
[2026-01-13 08:57:16] 2026-01-13 13:56:43,676 | INFO     | sum of deviations: 44810095132789.09
[2026-01-13 08:57:16] 2026-01-13 13:56:43,676 | INFO     | mean x: 1768260504.6692216
[2026-01-13 08:57:16] 2026-01-13 13:56:43,676 | INFO     | mean y: 5361305.212264151
[2026-01-13 08:57:16] 2026-01-13 13:56:43,676 | INFO     | intersect: -52377237265.28009
[2026-01-13 08:57:16] 2026-01-13 13:56:43,677 | INFO     | chi2: 32.69322368074287
[2026-01-13 08:57:16] 2026-01-13 13:56:43,677 | INFO     | current memory leak: 29.62 B/s (using 1696 data points, chi2=32.69)
[2026-01-13 08:57:16] 2026-01-13 13:56:43,679 | INFO     | could have reported an average CPU frequency of 3185 MHz (61 samples)
[2026-01-13 08:57:16] 2026-01-13 13:56:43,680 | INFO     | ..............................
[2026-01-13 08:57:16] 2026-01-13 13:56:43,680 | INFO     | . Timing measurements:
[2026-01-13 08:57:16] 2026-01-13 13:56:43,680 | INFO     | . get job = 0 s
[2026-01-13 08:57:16] 2026-01-13 13:56:43,680 | INFO     | . initial setup = 2 s
[2026-01-13 08:57:16] 2026-01-13 13:56:43,680 | INFO     | . payload setup = 12 s
[2026-01-13 08:57:16] 2026-01-13 13:56:43,680 | INFO     | . stage-in = 0 s
[2026-01-13 08:57:16] 2026-01-13 13:56:43,680 | INFO     | . payload execution = 104399 s
[2026-01-13 08:57:16] 2026-01-13 13:56:43,680 | INFO     | . stage-out = 3 s
[2026-01-13 08:57:16] 2026-01-13 13:56:43,680 | INFO     | . log creation = 0 s
[2026-01-13 08:57:16] 2026-01-13 13:56:43,680 | INFO     | ..............................
[2026-01-13 08:57:16] 2026-01-13 13:56:44,138 | INFO     | 
[2026-01-13 08:57:16] 2026-01-13 13:56:44,138 | INFO     | job summary report
[2026-01-13 08:57:16] 2026-01-13 13:56:44,138 | INFO     | --------------------------------------------------
[2026-01-13 08:57:16] 2026-01-13 13:56:44,138 | INFO     | PanDA job id: 6966844295
[2026-01-13 08:57:16] 2026-01-13 13:56:44,139 | INFO     | task id: 48187943
[2026-01-13 08:57:16] 2026-01-13 13:56:44,139 | INFO     | errors: (none)
[2026-01-13 08:57:16] 2026-01-13 13:56:44,139 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 08:57:16] 2026-01-13 13:56:44,139 | INFO     | pilot state: finished 
[2026-01-13 08:57:16] 2026-01-13 13:56:44,139 | INFO     | transexitcode: 0
[2026-01-13 08:57:16] 2026-01-13 13:56:44,139 | INFO     | exeerrorcode: 0
[2026-01-13 08:57:16] 2026-01-13 13:56:44,139 | INFO     | exeerrordiag: 
[2026-01-13 08:57:16] 2026-01-13 13:56:44,139 | INFO     | exitcode: 0
[2026-01-13 08:57:16] 2026-01-13 13:56:44,139 | INFO     | exitmsg: OK
[2026-01-13 08:57:16] 2026-01-13 13:56:44,139 | INFO     | cpuconsumptiontime: 231436 s
[2026-01-13 08:57:16] 2026-01-13 13:56:44,139 | INFO     | nevents: 2050
[2026-01-13 08:57:16] 2026-01-13 13:56:44,139 | INFO     | neventsw: 0
[2026-01-13 08:57:16] 2026-01-13 13:56:44,139 | INFO     | pid: 468610
[2026-01-13 08:57:16] 2026-01-13 13:56:44,139 | INFO     | pgrp: 468610
[2026-01-13 08:57:16] 2026-01-13 13:56:44,139 | INFO     | corecount: 9
[2026-01-13 08:57:16] 2026-01-13 13:56:44,139 | INFO     | event service: False
[2026-01-13 08:57:16] 2026-01-13 13:56:44,139 | INFO     | sizes: {0: 2283789, 1: 2284645, 6: 2284907, 12: 2284935, 104415: 2378160, 104420: 2387158, 104423: 2387342, 104429: 2387588}
[2026-01-13 08:57:16] 2026-01-13 13:56:44,139 | INFO     | --------------------------------------------------
[2026-01-13 08:57:16] 2026-01-13 13:56:44,139 | INFO     | 
[2026-01-13 08:57:16] 2026-01-13 13:56:44,139 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-13 08:57:16] 2026-01-13 13:56:44,161 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 08:57:16] 2026-01-13 13:56:44,161 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 08:57:16] 2026-01-13 13:56:44,161 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 08:57:16] 2026-01-13 13:56:44,161 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 08:57:16] 2026-01-13 13:56:44,161 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 08:57:16] 2026-01-13 13:56:44,161 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 08:57:16] 2026-01-13 13:56:44,161 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 08:57:16] 2026-01-13 13:56:44,162 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 08:57:16] 2026-01-13 13:56:44,162 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 08:57:16] 2026-01-13 13:56:44,162 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 08:57:16] 2026-01-13 13:56:44,162 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 08:57:16] 2026-01-13 13:56:44,162 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 08:57:16] 2026-01-13 13:56:44,162 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 08:57:16] 2026-01-13 13:56:44,162 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 08:57:16] 2026-01-13 13:56:44,162 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 08:57:16] 2026-01-13 13:56:44,162 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 08:57:16] 2026-01-13 13:56:44,162 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 08:57:16] 2026-01-13 13:56:44,162 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 08:57:16] 2026-01-13 13:56:44,162 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 08:57:16] 2026-01-13 13:56:44,162 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 08:57:16] 2026-01-13 13:56:44,162 | INFO     | job 6966844295 has completed (purged errors)
[2026-01-13 08:57:16] 2026-01-13 13:56:44,163 | INFO     | overall cleanup function is called
[2026-01-13 08:57:16] 2026-01-13 13:56:45,180 | INFO     | --- collectZombieJob: --- 10, [468610]
[2026-01-13 08:57:16] 2026-01-13 13:56:45,180 | INFO     | zombie collector waiting for pid 468610
[2026-01-13 08:57:16] 2026-01-13 13:56:45,180 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 08:57:16] 2026-01-13 13:56:45,180 | INFO     | collected zombie processes
[2026-01-13 08:57:16] 2026-01-13 13:56:45,180 | INFO     | will attempt to kill all subprocesses of pid=468610
[2026-01-13 08:57:16] 2026-01-13 13:56:45,594 | INFO     | process IDs to be killed: [468610] (in reverse order)
[2026-01-13 08:57:16] 2026-01-13 13:56:45,728 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 08:57:16] 2026-01-13 13:56:45,728 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 08:57:16] 2026-01-13 13:56:45,741 | INFO     | did not find any defunct processes belonging to 468610
[2026-01-13 08:57:16] 2026-01-13 13:56:45,752 | INFO     | did not find any defunct processes belonging to 468610
[2026-01-13 08:57:16] 2026-01-13 13:56:45,752 | INFO     | ready for new job
[2026-01-13 08:57:16] 2026-01-13 13:56:45,753 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 08:57:16] 2026-01-13 13:56:45,761 | INFO     | ***************************************
[2026-01-13 08:57:16] 2026-01-13 13:56:45,762 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 08:57:16] 2026-01-13 13:56:45,762 | INFO     | ***************************************
[2026-01-13 08:57:16] 2026-01-13 13:56:45,762 | INFO     | 
[2026-01-13 08:57:16] 2026-01-13 13:56:45,766 | INFO     | architecture information:
[2026-01-13 08:57:16] 2026-01-13 13:56:45,767 | INFO     | executing command: cat /etc/os-release
[2026-01-13 08:57:16] 2026-01-13 13:56:45,792 | INFO     | cat /etc/os-release:
[2026-01-13 08:57:16] NAME="CentOS Linux"
[2026-01-13 08:57:16] VERSION="7 (Core)"
[2026-01-13 08:57:16] ID="centos"
[2026-01-13 08:57:16] ID_LIKE="rhel fedora"
[2026-01-13 08:57:16] VERSION_ID="7"
[2026-01-13 08:57:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 08:57:16] ANSI_COLOR="0;31"
[2026-01-13 08:57:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 08:57:16] HOME_URL="https://www.centos.org/"
[2026-01-13 08:57:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 08:57:16] 
[2026-01-13 08:57:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 08:57:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 08:57:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 08:57:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 08:57:16] 
[2026-01-13 08:57:16] 2026-01-13 13:56:45,793 | INFO     | ***************************************
[2026-01-13 08:57:16] 2026-01-13 13:56:46,297 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-13 08:57:16] 2026-01-13 13:56:46,321 | INFO     | sufficient remaining disk space (123541127168 B)
[2026-01-13 08:57:16] 2026-01-13 13:56:46,321 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 08:57:16] 2026-01-13 13:56:46,322 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 08:57:16] 2026-01-13 13:56:46,322 | INFO     | update_server=False
[2026-01-13 08:57:16] 2026-01-13 13:56:46,322 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 08:57:16] 2026-01-13 13:56:46,789 | INFO     | all data control threads have been joined
[2026-01-13 08:57:16] 2026-01-13 13:56:47,087 | INFO     | all job control threads have been joined
[2026-01-13 08:57:16] 2026-01-13 13:56:47,316 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 08:57:16] 2026-01-13 13:56:47,316 | INFO     | aborting loop
[2026-01-13 08:57:16] 2026-01-13 13:56:47,328 | INFO     | [job] retrieve thread has finished
[2026-01-13 08:57:16] 2026-01-13 13:56:47,369 | INFO     | [payload] failed_post thread has finished
[2026-01-13 08:57:16] 2026-01-13 13:56:47,707 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 08:57:16] 2026-01-13 13:56:47,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 08:57:16] 2026-01-13 13:56:47,795 | INFO     | [data] control thread has finished
[2026-01-13 08:57:16] 2026-01-13 13:56:47,799 | INFO     | all payload control threads have been joined
[2026-01-13 08:57:16] 2026-01-13 13:56:47,939 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 08:57:16] 2026-01-13 13:56:47,963 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 08:57:16] 2026-01-13 13:56:48,093 | INFO     | [job] control thread has finished
[2026-01-13 08:57:16] 2026-01-13 13:56:48,248 | INFO     | [job] validate thread has finished
[2026-01-13 08:57:16] 2026-01-13 13:56:48,310 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 08:57:16] 2026-01-13 13:56:48,322 | INFO     | [job] job monitor thread has finished
[2026-01-13 08:57:16] 2026-01-13 13:56:48,724 | INFO     | [data] copytool_in thread has finished
[2026-01-13 08:57:16] 2026-01-13 13:56:48,779 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 08:57:16] 2026-01-13 13:56:48,783 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 08:57:16] 2026-01-13 13:56:48,805 | INFO     | [payload] control thread has finished
[2026-01-13 08:57:16] 2026-01-13 13:56:48,897 | INFO     | [payload] validate_post thread has finished
[2026-01-13 08:57:16] 2026-01-13 13:56:49,725 | INFO     | [data] copytool_out thread has finished
[2026-01-13 08:57:16] 2026-01-13 13:56:49,789 | INFO     | [job] queue monitor thread has finished
[2026-01-13 08:57:16] 2026-01-13 13:56:51,971 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 08:57:16] 2026-01-13 13:57:07,068 | INFO     | [monitor] cgroup control has ended
[2026-01-13 08:57:16] 2026-01-13 13:57:08,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139686554822464)>', '<ExcThread(monitor, started 139686194427648)>']
[2026-01-13 08:57:16] 2026-01-13 13:57:13,286 | INFO     | all workflow threads have been joined
[2026-01-13 08:57:16] 2026-01-13 13:57:13,286 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 08:57:16] 2026-01-13 13:57:13,287 | INFO     | traces error code: 0
[2026-01-13 08:57:16] 2026-01-13 13:57:13,287 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 08:57:16] 2026-01-13 13:57:16,242 | INFO     | PID=452316 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-13 08:57:16] 2026-01-13 13:57:16,242 | INFO     | .. there are 24 such processes running
[2026-01-13 08:57:16] 2026-01-13 13:57:16,242 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 08:57:16] 2026-01-13 13:57:16,242 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 08:57:16] 2026-01-13 13:57:16,242 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 08:57:16] 2026-01-13 13:57:16,242 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 08:57:16] 2026-01-13 13:57:16,242 | INFO     | [monitor] control thread has ended
[2026-01-13 08:57:16] 2026-01-13 13:57:16,363 [wrapper] ==== pilot stdout END ====
[2026-01-13 08:57:16] 2026-01-13 13:57:16,366 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 08:57:16] 2026-01-13 13:57:16,370 [wrapper] pilotpid: 452316
[2026-01-13 08:57:16] 2026-01-13 13:57:16,373 [wrapper] Pilot exit status: 0
[2026-01-13 08:57:16] 2026-01-13 13:57:16,385 [wrapper] pandaids: 6966844295
[2026-01-13 08:57:16] 2026-01-13 13:57:16,488 [wrapper] cleanup supervisor_pilot 1570480 452318
[2026-01-13 08:57:16] 2026-01-13 13:57:16,491 [wrapper] Test setup, not cleaning
[2026-01-13 08:57:16] 2026-01-13 13:57:16,494 [wrapper] apfmon messages muted
[2026-01-13 08:57:16] 2026-01-13 13:57:16,498 [wrapper] ==== wrapper stdout END ====
[2026-01-13 08:57:16] 2026-01-13 13:57:16,500 [wrapper] ==== wrapper stderr END ====
[2026-01-13 08:57:16]  *** Error codes and diagnostics ***
[2026-01-13 08:57:16]     "exeErrorCode": 0,
[2026-01-13 08:57:16]     "exeErrorDiag": "",
[2026-01-13 08:57:16]     "pilotErrorCode": 0,
[2026-01-13 08:57:16]     "pilotErrorDiag": "",
[2026-01-13 08:57:16]  *** Listing of results directory ***
[2026-01-13 08:57:16] total 1515656
[2026-01-13 08:57:16] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 03:42 pilot3.tar.gz
[2026-01-13 08:57:16] -rwx------. 1 boincer umatlas      36322 Jan 12 03:49 runpilot2-wrapper.sh
[2026-01-13 08:57:16] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 03:49 queuedata.json
[2026-01-13 08:57:16] -rw-r--r--. 1 boincer umatlas        100 Jan 12 03:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 08:57:16] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 03:55 run_atlas
[2026-01-13 08:57:16] -rw-r--r--. 1 boincer umatlas        105 Jan 12 03:55 job.xml
[2026-01-13 08:57:16] -rw-r--r--. 2 boincer umatlas  322254118 Jan 12 03:55 EVNT.48118027._000062.pool.root.1
[2026-01-13 08:57:16] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 03:55 start_atlas.sh
[2026-01-13 08:57:16] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 03:55 shared
[2026-01-13 08:57:16] -rw-r--r--. 2 boincer umatlas     592613 Jan 12 03:55 input.tar.gz
[2026-01-13 08:57:16] -rw-r--r--. 1 boincer umatlas          0 Jan 12 03:55 boinc_lockfile
[2026-01-13 08:57:16] -rw-r--r--. 1 boincer umatlas       2894 Jan 12 03:55 pandaJob.out
[2026-01-13 08:57:16] -rw-------. 1 boincer umatlas         57 Jan 12 03:55 setup.sh.local
[2026-01-13 08:57:16] -rw-------. 1 boincer umatlas     987688 Jan 12 03:55 agis_schedconf.cvmfs.json
[2026-01-13 08:57:16] drwx------. 5 boincer umatlas       4096 Jan 12 03:55 pilot3
[2026-01-13 08:57:16] -rw-r--r--. 1 boincer umatlas       6959 Jan 13 08:49 init_data.xml
[2026-01-13 08:57:16] -rw-r--r--. 1 boincer umatlas        534 Jan 13 08:50 boinc_task_state.xml
[2026-01-13 08:57:16] -rw-------. 1 boincer umatlas 1194035694 Jan 13 08:56 HITS.48187943._000299.pool.root.1
[2026-01-13 08:57:16] -rw-------. 1 boincer umatlas       1078 Jan 13 08:56 memory_monitor_summary.json
[2026-01-13 08:57:16] -rw-------. 1 boincer umatlas    1516240 Jan 13 08:56 agis_ddmendpoints.agis.ALL.json
[2026-01-13 08:57:16] -rw-------. 1 boincer umatlas    3124591 Jan 13 08:56 log.48187943._000299.job.log.tgz.1
[2026-01-13 08:57:16] -rw-------. 1 boincer umatlas         95 Jan 13 08:56 pilot_heartbeat.json
[2026-01-13 08:57:16] -rw-------. 1 boincer umatlas      28005 Jan 13 08:56 heartbeat.json
[2026-01-13 08:57:16] -rw-r--r--. 1 boincer umatlas         30 Jan 13 08:57 wrapper_checkpoint.txt
[2026-01-13 08:57:16] -rw-r--r--. 1 boincer umatlas       8192 Jan 13 08:57 boinc_mmap_file
[2026-01-13 08:57:16] -rw-------. 1 boincer umatlas        822 Jan 13 08:57 pilotlog.txt
[2026-01-13 08:57:16] -rw-------. 1 boincer umatlas   12768893 Jan 13 08:57 log.48187943._000299.job.log.1
[2026-01-13 08:57:16] -rw-------. 1 boincer umatlas        353 Jan 13 08:57 output.list
[2026-01-13 08:57:16] -rw-r--r--. 1 boincer umatlas        620 Jan 13 08:57 runtime_log
[2026-01-13 08:57:16] -rw-------. 1 boincer umatlas   15933440 Jan 13 08:57 result.tar.gz
[2026-01-13 08:57:16] -rw-r--r--. 1 boincer umatlas       9339 Jan 13 08:57 runtime_log.err
[2026-01-13 08:57:16] -rw-------. 1 boincer umatlas        668 Jan 13 08:57 A92NDm8mSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrCnKDmwPVgfm.diag
[2026-01-13 08:57:16] -rw-r--r--. 1 boincer umatlas      21648 Jan 13 08:57 stderr.txt
[2026-01-13 08:57:16] HITS file was successfully produced:
[2026-01-13 08:57:16] -rw-------. 1 boincer umatlas 1194035694 Jan 13 08:56 shared/HITS.pool.root.1
[2026-01-13 08:57:16]  *** Contents of shared directory: ***
[2026-01-13 08:57:16] total 1496920
[2026-01-13 08:57:16] -rw-r--r--. 2 boincer umatlas  322254118 Jan 12 03:55 ATLAS.root_0
[2026-01-13 08:57:16] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 03:55 start_atlas.sh
[2026-01-13 08:57:16] -rw-r--r--. 2 boincer umatlas     592613 Jan 12 03:55 input.tar.gz
[2026-01-13 08:57:16] -rw-------. 1 boincer umatlas 1194035694 Jan 13 08:56 HITS.pool.root.1
[2026-01-13 08:57:16] -rw-------. 1 boincer umatlas   15933440 Jan 13 08:57 result.tar.gz
08:57:18 (445898): run_atlas exited; CPU time 232178.104787
08:57:18 (445898): called boinc_finish(0)

</stderr_txt>
]]>

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