Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:53:58 (31592): wrapper (7.7.26015): starting
03:53:58 (31592): wrapper: running run_atlas (--nthreads 12)
[2026-01-12 03:53:58] Arguments: --nthreads 12
[2026-01-12 03:53:58] Threads: 12
[2026-01-12 03:53:58] Checking for CVMFS
[2026-01-12 03:53:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 03:53:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 03:53:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 03:53:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 03:53:59] 2.11.2.0 2925 355148 96640 155045 1 1 17667781 20275201 1 130560 1 147513362 99.955 20524281 15985 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 03:53:59] CVMFS is ok
[2026-01-12 03:53:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 03:53:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 03:53:59] Further information can be found at the LHC@home message board.
[2026-01-12 03:53:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 03:53:59] Checking for apptainer binary...
[2026-01-12 03:53:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 03:53:59] Running /usr/bin/apptainer --version
[2026-01-12 03:53:59] apptainer version 1.3.2-1.el7
[2026-01-12 03:53:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 03:54:00] c-205-10.aglt2.org
[2026-01-12 03:54:00] apptainer works
[2026-01-12 03:54:00] Set ATHENA_PROC_NUMBER=12
[2026-01-12 03:54:00] Set ATHENA_CORE_NUMBER=12
[2026-01-12 03:54:00] Starting ATLAS job with PandaID=6966849810
[2026-01-12 03:54:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 15:50:27]  *** The last 200 lines of the pilot log: ***
[2026-01-12 15:50:27] 2026-01-12 20:49:38,677 | INFO     | time since job start (42921s) is within the limit (349056.0s)
[2026-01-12 15:50:27] 2026-01-12 20:49:39,756 | INFO     | monitor loop #3230: job 0:6966849810 is in state 'finished'
[2026-01-12 15:50:27] 2026-01-12 20:49:39,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 15:50:27] 2026-01-12 20:49:40,295 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-12 15:50:27] 2026-01-12 20:49:40,298 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.75
[2026-01-12 15:50:27] 2026-01-12 20:49:40,299 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966849810/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 15:50:27] 2026-01-12 20:49:40,300 | INFO     | extracted standard info from prmon json
[2026-01-12 15:50:27] 2026-01-12 20:49:40,300 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 15:50:27] 2026-01-12 20:49:40,300 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 15:50:27] 2026-01-12 20:49:40,311 | INFO     | fitting pss+swap vs Time
[2026-01-12 15:50:27] 2026-01-12 20:49:40,312 | INFO     | sum of square deviations: 107731643477.9943
[2026-01-12 15:50:27] 2026-01-12 20:49:40,321 | INFO     | sum of deviations: 1377760266157.4019
[2026-01-12 15:50:27] 2026-01-12 20:49:40,321 | INFO     | mean x: 1768229504.002845
[2026-01-12 15:50:27] 2026-01-12 20:49:40,321 | INFO     | mean y: 4122771.2987197726
[2026-01-12 15:50:27] 2026-01-12 20:49:40,322 | INFO     | intersect: -22609440648.06894
[2026-01-12 15:50:27] 2026-01-12 20:49:40,322 | INFO     | chi2: 6.122087080636295
[2026-01-12 15:50:27] 2026-01-12 20:49:40,323 | INFO     | sum of square deviations: 105449266410.4945
[2026-01-12 15:50:27] 2026-01-12 20:49:40,332 | INFO     | sum of deviations: 1713235295799.7983
[2026-01-12 15:50:27] 2026-01-12 20:49:40,332 | INFO     | mean x: 1768229351.5028653
[2026-01-12 15:50:27] 2026-01-12 20:49:40,333 | INFO     | mean y: 4145177.3510028655
[2026-01-12 15:50:27] 2026-01-12 20:49:40,333 | INFO     | intersect: -28724294945.418842
[2026-01-12 15:50:27] 2026-01-12 20:49:40,333 | INFO     | chi2: 2.9773301916203203
[2026-01-12 15:50:27] 2026-01-12 20:49:40,333 | INFO     | current chi2=2.9773301916203203 (change=51.36739885590007 %)
[2026-01-12 15:50:27] 2026-01-12 20:49:40,334 | INFO     | sum of square deviations: 103199355067.99425
[2026-01-12 15:50:27] 2026-01-12 20:49:40,343 | INFO     | sum of deviations: 1763353849398.406
[2026-01-12 15:50:27] 2026-01-12 20:49:40,343 | INFO     | mean x: 1768229199.002886
[2026-01-12 15:50:27] 2026-01-12 20:49:40,344 | INFO     | mean y: 4148554.7965367967
[2026-01-12 15:50:27] 2026-01-12 20:49:40,344 | INFO     | intersect: -30209351932.93476
[2026-01-12 15:50:27] 2026-01-12 20:49:40,344 | INFO     | chi2: 2.69484382606549
[2026-01-12 15:50:27] 2026-01-12 20:49:40,345 | INFO     | current chi2=2.69484382606549 (change=9.48790854134643 %)
[2026-01-12 15:50:27] 2026-01-12 20:49:40,345 | INFO     | right removable region: 692
[2026-01-12 15:50:27] 2026-01-12 20:49:40,345 | INFO     | sum of square deviations: 105449265190.4945
[2026-01-12 15:50:27] 2026-01-12 20:49:40,355 | INFO     | sum of deviations: 1082951746953.0537
[2026-01-12 15:50:27] 2026-01-12 20:49:40,355 | INFO     | mean x: 1768229656.5028653
[2026-01-12 15:50:27] 2026-01-12 20:49:40,355 | INFO     | mean y: 4142438.723495702
[2026-01-12 15:50:27] 2026-01-12 20:49:40,355 | INFO     | intersect: -18155371447.548622
[2026-01-12 15:50:27] 2026-01-12 20:49:40,356 | INFO     | chi2: 3.652192981435838
[2026-01-12 15:50:27] 2026-01-12 20:49:40,356 | INFO     | current chi2=3.652192981435838 (change=40.343988359991606 %)
[2026-01-12 15:50:27] 2026-01-12 20:49:40,357 | INFO     | sum of square deviations: 103199352627.99425
[2026-01-12 15:50:27] 2026-01-12 20:49:40,366 | INFO     | sum of deviations: 1020858675606.0842
[2026-01-12 15:50:27] 2026-01-12 20:49:40,366 | INFO     | mean x: 1768229809.002886
[2026-01-12 15:50:27] 2026-01-12 20:49:40,366 | INFO     | mean y: 4146644.958152958
[2026-01-12 15:50:27] 2026-01-12 20:49:40,366 | INFO     | intersect: -17487365607.961
[2026-01-12 15:50:27] 2026-01-12 20:49:40,367 | INFO     | chi2: 3.6146985668378746
[2026-01-12 15:50:27] 2026-01-12 20:49:40,367 | INFO     | current chi2=3.6146985668378746 (change=1.0266274205264614 %)
[2026-01-12 15:50:27] 2026-01-12 20:49:40,367 | INFO     | left removable region: 20
[2026-01-12 15:50:27] 2026-01-12 20:49:40,368 | INFO     | sum of square deviations: 94099041945.99832
[2026-01-12 15:50:27] 2026-01-12 20:49:40,376 | INFO     | sum of deviations: 1319903497662.2913
[2026-01-12 15:50:27] 2026-01-12 20:49:40,377 | INFO     | mean x: 1768229778.5014882
[2026-01-12 15:50:27] 2026-01-12 20:49:40,377 | INFO     | mean y: 4178706.2098214286
[2026-01-12 15:50:27] 2026-01-12 20:49:40,377 | INFO     | intersect: -24798333849.168907
[2026-01-12 15:50:27] 2026-01-12 20:49:40,378 | INFO     | chi2: 0.14975492677726182
[2026-01-12 15:50:27] 2026-01-12 20:49:40,378 | INFO     | current memory leak: 14.03 B/s (using 672 data points, chi2=0.15)
[2026-01-12 15:50:27] 2026-01-12 20:49:40,378 | INFO     | could have reported an average CPU frequency of 2483 MHz (27 samples)
[2026-01-12 15:50:27] 2026-01-12 20:49:40,378 | INFO     | ..............................
[2026-01-12 15:50:27] 2026-01-12 20:49:40,379 | INFO     | . Timing measurements:
[2026-01-12 15:50:27] 2026-01-12 20:49:40,379 | INFO     | . get job = 0 s
[2026-01-12 15:50:27] 2026-01-12 20:49:40,379 | INFO     | . initial setup = 2 s
[2026-01-12 15:50:27] 2026-01-12 20:49:40,379 | INFO     | . payload setup = 14 s
[2026-01-12 15:50:27] 2026-01-12 20:49:40,379 | INFO     | . stage-in = 0 s
[2026-01-12 15:50:27] 2026-01-12 20:49:40,379 | INFO     | . payload execution = 42876 s
[2026-01-12 15:50:27] 2026-01-12 20:49:40,379 | INFO     | . stage-out = 3 s
[2026-01-12 15:50:27] 2026-01-12 20:49:40,379 | INFO     | . log creation = 0 s
[2026-01-12 15:50:27] 2026-01-12 20:49:40,379 | INFO     | ..............................
[2026-01-12 15:50:27] 2026-01-12 20:49:40,460 | INFO     | 
[2026-01-12 15:50:27] 2026-01-12 20:49:40,460 | INFO     | job summary report
[2026-01-12 15:50:27] 2026-01-12 20:49:40,460 | INFO     | --------------------------------------------------
[2026-01-12 15:50:27] 2026-01-12 20:49:40,460 | INFO     | PanDA job id: 6966849810
[2026-01-12 15:50:27] 2026-01-12 20:49:40,461 | INFO     | task id: 48187943
[2026-01-12 15:50:27] 2026-01-12 20:49:40,461 | INFO     | errors: (none)
[2026-01-12 15:50:27] 2026-01-12 20:49:40,461 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 15:50:27] 2026-01-12 20:49:40,461 | INFO     | pilot state: finished 
[2026-01-12 15:50:27] 2026-01-12 20:49:40,461 | INFO     | transexitcode: 0
[2026-01-12 15:50:27] 2026-01-12 20:49:40,461 | INFO     | exeerrorcode: 0
[2026-01-12 15:50:27] 2026-01-12 20:49:40,462 | INFO     | exeerrordiag: 
[2026-01-12 15:50:27] 2026-01-12 20:49:40,462 | INFO     | exitcode: 0
[2026-01-12 15:50:27] 2026-01-12 20:49:40,462 | INFO     | exitmsg: OK
[2026-01-12 15:50:27] 2026-01-12 20:49:40,462 | INFO     | cpuconsumptiontime: 405570 s
[2026-01-12 15:50:27] 2026-01-12 20:49:40,462 | INFO     | nevents: 2050
[2026-01-12 15:50:27] 2026-01-12 20:49:40,462 | INFO     | neventsw: 0
[2026-01-12 15:50:27] 2026-01-12 20:49:40,462 | INFO     | pid: 10087
[2026-01-12 15:50:27] 2026-01-12 20:49:40,463 | INFO     | pgrp: 10087
[2026-01-12 15:50:27] 2026-01-12 20:49:40,463 | INFO     | corecount: 12
[2026-01-12 15:50:27] 2026-01-12 20:49:40,463 | INFO     | event service: False
[2026-01-12 15:50:27] 2026-01-12 20:49:40,463 | INFO     | sizes: {0: 2284448, 1: 2284647, 6: 2284909, 12: 2284937, 42895: 2349392, 42899: 2358574, 42908: 2358764}
[2026-01-12 15:50:27] 2026-01-12 20:49:40,463 | INFO     | --------------------------------------------------
[2026-01-12 15:50:27] 2026-01-12 20:49:40,463 | INFO     | 
[2026-01-12 15:50:27] 2026-01-12 20:49:40,464 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-12 15:50:27] 2026-01-12 20:49:40,488 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 15:50:27] 2026-01-12 20:49:40,489 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 15:50:27] 2026-01-12 20:49:40,489 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 15:50:27] 2026-01-12 20:49:40,489 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 15:50:27] 2026-01-12 20:49:40,489 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 15:50:27] 2026-01-12 20:49:40,489 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 15:50:27] 2026-01-12 20:49:40,489 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 15:50:27] 2026-01-12 20:49:40,490 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 15:50:27] 2026-01-12 20:49:40,490 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 15:50:27] 2026-01-12 20:49:40,490 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 15:50:27] 2026-01-12 20:49:40,490 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 15:50:27] 2026-01-12 20:49:40,490 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 15:50:27] 2026-01-12 20:49:40,490 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 15:50:27] 2026-01-12 20:49:40,491 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 15:50:27] 2026-01-12 20:49:40,491 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 15:50:27] 2026-01-12 20:49:40,491 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 15:50:27] 2026-01-12 20:49:40,491 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 15:50:27] 2026-01-12 20:49:40,491 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 15:50:27] 2026-01-12 20:49:40,491 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 15:50:27] 2026-01-12 20:49:40,492 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 15:50:27] 2026-01-12 20:49:40,492 | INFO     | job 6966849810 has completed (purged errors)
[2026-01-12 15:50:27] 2026-01-12 20:49:40,492 | INFO     | overall cleanup function is called
[2026-01-12 15:50:27] 2026-01-12 20:49:41,509 | INFO     | --- collectZombieJob: --- 10, [10087]
[2026-01-12 15:50:27] 2026-01-12 20:49:41,509 | INFO     | zombie collector waiting for pid 10087
[2026-01-12 15:50:27] 2026-01-12 20:49:41,515 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 15:50:27] 2026-01-12 20:49:41,515 | INFO     | collected zombie processes
[2026-01-12 15:50:27] 2026-01-12 20:49:41,515 | INFO     | will attempt to kill all subprocesses of pid=10087
[2026-01-12 15:50:27] 2026-01-12 20:49:41,609 | INFO     | process IDs to be killed: [10087] (in reverse order)
[2026-01-12 15:50:27] 2026-01-12 20:49:41,662 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 15:50:27] 2026-01-12 20:49:41,662 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 15:50:27] 2026-01-12 20:49:41,666 | INFO     | did not find any defunct processes belonging to 10087
[2026-01-12 15:50:27] 2026-01-12 20:49:41,669 | INFO     | did not find any defunct processes belonging to 10087
[2026-01-12 15:50:27] 2026-01-12 20:49:41,669 | INFO     | ready for new job
[2026-01-12 15:50:27] 2026-01-12 20:49:41,669 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 15:50:27] 2026-01-12 20:49:41,673 | INFO     | ***************************************
[2026-01-12 15:50:27] 2026-01-12 20:49:41,673 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 15:50:27] 2026-01-12 20:49:41,673 | INFO     | ***************************************
[2026-01-12 15:50:27] 2026-01-12 20:49:41,673 | INFO     | 
[2026-01-12 15:50:27] 2026-01-12 20:49:41,674 | INFO     | architecture information:
[2026-01-12 15:50:27] 2026-01-12 20:49:41,675 | INFO     | executing command: cat /etc/os-release
[2026-01-12 15:50:27] 2026-01-12 20:49:41,690 | INFO     | cat /etc/os-release:
[2026-01-12 15:50:27] NAME="CentOS Linux"
[2026-01-12 15:50:27] VERSION="7 (Core)"
[2026-01-12 15:50:27] ID="centos"
[2026-01-12 15:50:27] ID_LIKE="rhel fedora"
[2026-01-12 15:50:27] VERSION_ID="7"
[2026-01-12 15:50:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 15:50:27] ANSI_COLOR="0;31"
[2026-01-12 15:50:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 15:50:27] HOME_URL="https://www.centos.org/"
[2026-01-12 15:50:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 15:50:27] 
[2026-01-12 15:50:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 15:50:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 15:50:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 15:50:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 15:50:27] 
[2026-01-12 15:50:27] 2026-01-12 20:49:41,691 | INFO     | ***************************************
[2026-01-12 15:50:27] 2026-01-12 20:49:42,194 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-12 15:50:27] 2026-01-12 20:49:42,211 | INFO     | sufficient remaining disk space (28143779840 B)
[2026-01-12 15:50:27] 2026-01-12 20:49:42,212 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 15:50:27] 2026-01-12 20:49:42,212 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 15:50:27] 2026-01-12 20:49:42,212 | INFO     | update_server=False
[2026-01-12 15:50:27] 2026-01-12 20:49:42,212 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 15:50:27] 2026-01-12 20:49:42,213 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 15:50:27] 2026-01-12 20:49:42,260 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-12 15:50:27] 2026-01-12 20:49:42,260 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-12 15:50:27] 2026-01-12 20:49:42,260 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 15:50:27] 2026-01-12 20:49:42,261 | INFO     | will abort loop
[2026-01-12 15:50:27] 2026-01-12 20:49:42,708 | INFO     | all job control threads have been joined
[2026-01-12 15:50:27] 2026-01-12 20:49:42,794 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 15:50:27] 2026-01-12 20:49:42,851 | INFO     | all data control threads have been joined
[2026-01-12 15:50:27] 2026-01-12 20:49:42,881 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 15:50:27] 2026-01-12 20:49:43,218 | INFO     | [job] retrieve thread has finished
[2026-01-12 15:50:27] 2026-01-12 20:49:43,219 | INFO     | [job] queue monitor thread has finished
[2026-01-12 15:50:27] 2026-01-12 20:49:43,266 | INFO     | [job] job monitor thread has finished
[2026-01-12 15:50:27] 2026-01-12 20:49:43,399 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 15:50:27] 2026-01-12 20:49:43,476 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 15:50:27] 2026-01-12 20:49:43,491 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 15:50:27] 2026-01-12 20:49:43,558 | INFO     | all payload control threads have been joined
[2026-01-12 15:50:27] 2026-01-12 20:49:43,710 | INFO     | [job] control thread has finished
[2026-01-12 15:50:27] 2026-01-12 20:49:43,718 | INFO     | [data] copytool_in thread has finished
[2026-01-12 15:50:27] 2026-01-12 20:49:43,776 | INFO     | [payload] validate_post thread has finished
[2026-01-12 15:50:27] 2026-01-12 20:49:43,856 | INFO     | [data] control thread has finished
[2026-01-12 15:50:27] 2026-01-12 20:49:43,903 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 15:50:27] 2026-01-12 20:49:44,446 | INFO     | [job] validate thread has finished
[2026-01-12 15:50:27] 2026-01-12 20:49:44,563 | INFO     | [payload] control thread has finished
[2026-01-12 15:50:27] 2026-01-12 20:49:44,600 | INFO     | [payload] failed_post thread has finished
[2026-01-12 15:50:27] 2026-01-12 20:49:44,799 | INFO     | [data] copytool_out thread has finished
[2026-01-12 15:50:27] 2026-01-12 20:49:46,887 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 15:50:27] 2026-01-12 20:50:11,892 | INFO     | PID=3051 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-12 15:50:27] 2026-01-12 20:50:11,893 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 15:50:27] 2026-01-12 20:50:11,893 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 15:50:27] 2026-01-12 20:50:11,893 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 15:50:27] 2026-01-12 20:50:21,395 | INFO     | [monitor] cgroup control has ended
[2026-01-12 15:50:27] 2026-01-12 20:50:22,003 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140037694555968)>', '<ExcThread(monitor, started 140036603377408)>']
[2026-01-12 15:50:27] 2026-01-12 20:50:22,932 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 15:50:27] 2026-01-12 20:50:22,932 | INFO     | [monitor] control thread has ended
[2026-01-12 15:50:27] 2026-01-12 20:50:27,011 | INFO     | all workflow threads have been joined
[2026-01-12 15:50:27] 2026-01-12 20:50:27,011 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 15:50:27] 2026-01-12 20:50:27,011 | INFO     | traces error code: 0
[2026-01-12 15:50:27] 2026-01-12 20:50:27,012 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 15:50:27] 2026-01-12 20:50:27,106 [wrapper] ==== pilot stdout END ====
[2026-01-12 15:50:27] 2026-01-12 20:50:27,110 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 15:50:27] 2026-01-12 20:50:27,114 [wrapper] pilotpid: 3051
[2026-01-12 15:50:27] 2026-01-12 20:50:27,118 [wrapper] Pilot exit status: 0
[2026-01-12 15:50:27] 2026-01-12 20:50:27,133 [wrapper] pandaids: 6966849810
[2026-01-12 15:50:27] 2026-01-12 20:50:27,181 [wrapper] cleanup supervisor_pilot 18170 3052
[2026-01-12 15:50:27] 2026-01-12 20:50:27,186 [wrapper] Test setup, not cleaning
[2026-01-12 15:50:27] 2026-01-12 20:50:27,190 [wrapper] apfmon messages muted
[2026-01-12 15:50:27] 2026-01-12 20:50:27,194 [wrapper] ==== wrapper stdout END ====
[2026-01-12 15:50:27] 2026-01-12 20:50:27,197 [wrapper] ==== wrapper stderr END ====
[2026-01-12 15:50:27]  *** Error codes and diagnostics ***
[2026-01-12 15:50:27]     "exeErrorCode": 0,
[2026-01-12 15:50:27]     "exeErrorDiag": "",
[2026-01-12 15:50:27]     "pilotErrorCode": 0,
[2026-01-12 15:50:27]     "pilotErrorDiag": "",
[2026-01-12 15:50:27]  *** Listing of results directory ***
[2026-01-12 15:50:27] total 1491484
[2026-01-12 15:50:27] -rwx------ 1 boincer umatlas      36322 Jan 12 03:50 runpilot2-wrapper.sh
[2026-01-12 15:50:27] -rw-r--r-- 1 boincer umatlas       5112 Jan 12 03:50 queuedata.json
[2026-01-12 15:50:27] -rw-r--r-- 1 boincer umatlas     579449 Jan 12 03:50 pilot3.tar.gz
[2026-01-12 15:50:27] -rw-r--r-- 1 boincer umatlas        100 Jan 12 03:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 15:50:27] -rwxr-xr-x 1 boincer umatlas       7986 Jan 12 03:53 run_atlas
[2026-01-12 15:50:27] -rw-r--r-- 1 boincer umatlas        105 Jan 12 03:53 job.xml
[2026-01-12 15:50:27] -rw-r--r-- 2 boincer umatlas  320198827 Jan 12 03:53 EVNT.48118027._000103.pool.root.1
[2026-01-12 15:50:27] -rw-r--r-- 2 boincer umatlas      15847 Jan 12 03:53 start_atlas.sh
[2026-01-12 15:50:27] drwxrwx--x 2 boincer umatlas       4096 Jan 12 03:53 shared
[2026-01-12 15:50:27] -rw-r--r-- 2 boincer umatlas     592608 Jan 12 03:53 input.tar.gz
[2026-01-12 15:50:27] -rw-r--r-- 1 boincer umatlas          0 Jan 12 03:53 boinc_lockfile
[2026-01-12 15:50:27] -rw-r--r-- 1 boincer umatlas       2895 Jan 12 03:54 pandaJob.out
[2026-01-12 15:50:27] -rw------- 1 boincer umatlas         57 Jan 12 03:54 setup.sh.local
[2026-01-12 15:50:27] -rw------- 1 boincer umatlas     987688 Jan 12 03:54 agis_schedconf.cvmfs.json
[2026-01-12 15:50:27] drwx------ 5 boincer umatlas       4096 Jan 12 03:54 pilot3
[2026-01-12 15:50:27] -rw-r--r-- 1 boincer umatlas        532 Jan 12 15:41 boinc_task_state.xml
[2026-01-12 15:50:27] -rw-r--r-- 1 boincer umatlas       5955 Jan 12 15:46 init_data.xml
[2026-01-12 15:50:27] -rw------- 1 boincer umatlas 1185633848 Jan 12 15:49 HITS.48187943._000499.pool.root.1
[2026-01-12 15:50:27] -rw------- 1 boincer umatlas       1062 Jan 12 15:49 memory_monitor_summary.json
[2026-01-12 15:50:27] -rw------- 1 boincer umatlas    1516240 Jan 12 15:49 agis_ddmendpoints.agis.ALL.json
[2026-01-12 15:50:27] -rw------- 1 boincer umatlas    2772412 Jan 12 15:49 log.48187943._000499.job.log.tgz.1
[2026-01-12 15:50:27] -rw------- 1 boincer umatlas      27548 Jan 12 15:49 heartbeat.json
[2026-01-12 15:50:27] -rw------- 1 boincer umatlas         95 Jan 12 15:50 pilot_heartbeat.json
[2026-01-12 15:50:27] -rw-r--r-- 1 boincer umatlas       8192 Jan 12 15:50 boinc_mmap_file
[2026-01-12 15:50:27] -rw-r--r-- 1 boincer umatlas         29 Jan 12 15:50 wrapper_checkpoint.txt
[2026-01-12 15:50:27] -rw------- 1 boincer umatlas       4931 Jan 12 15:50 pilotlog.txt
[2026-01-12 15:50:27] -rw------- 1 boincer umatlas    5975943 Jan 12 15:50 log.48187943._000499.job.log.1
[2026-01-12 15:50:27] -rw------- 1 boincer umatlas        353 Jan 12 15:50 output.list
[2026-01-12 15:50:27] -rw-r--r-- 1 boincer umatlas        620 Jan 12 15:50 runtime_log
[2026-01-12 15:50:27] -rw------- 1 boincer umatlas    8785920 Jan 12 15:50 result.tar.gz
[2026-01-12 15:50:27] -rw------- 1 boincer umatlas        670 Jan 12 15:50 ZocLDm7nSz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmKkhKDmyGSqQm.diag
[2026-01-12 15:50:27] -rw-r--r-- 1 boincer umatlas       9345 Jan 12 15:50 runtime_log.err
[2026-01-12 15:50:27] -rw-r--r-- 1 boincer umatlas      21190 Jan 12 15:50 stderr.txt
[2026-01-12 15:50:27] HITS file was successfully produced:
[2026-01-12 15:50:27] -rw------- 1 boincer umatlas 1185633848 Jan 12 15:49 shared/HITS.pool.root.1
[2026-01-12 15:50:27]  *** Contents of shared directory: ***
[2026-01-12 15:50:27] total 1479724
[2026-01-12 15:50:27] -rw-r--r-- 2 boincer umatlas  320198827 Jan 12 03:53 ATLAS.root_0
[2026-01-12 15:50:27] -rw-r--r-- 2 boincer umatlas      15847 Jan 12 03:53 start_atlas.sh
[2026-01-12 15:50:27] -rw-r--r-- 2 boincer umatlas     592608 Jan 12 03:53 input.tar.gz
[2026-01-12 15:50:27] -rw------- 1 boincer umatlas 1185633848 Jan 12 15:49 HITS.pool.root.1
[2026-01-12 15:50:27] -rw------- 1 boincer umatlas    8785920 Jan 12 15:50 result.tar.gz
15:50:29 (31592): run_atlas exited; CPU time 388374.334530
15:50:29 (31592): called boinc_finish(0)

</stderr_txt>
]]>

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