Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:50:33 (3271091): wrapper (7.7.26015): starting
09:50:33 (3271091): wrapper: running run_atlas (--nthreads 3)
[2026-01-12 09:50:33] Arguments: --nthreads 3
[2026-01-12 09:50:33] Threads: 3
[2026-01-12 09:50:33] Checking for CVMFS
[2026-01-12 09:50:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 09:50:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 09:50:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 09:50:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 09:50:35] 2.9.2.0 3271287 0 30068 155045 4 1 22361009 36864000 0 130560 0 0 0.000 1335 6123 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-12 09:50:35] CVMFS is ok
[2026-01-12 09:50:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 09:50:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 09:50:35] Further information can be found at the LHC@home message board.
[2026-01-12 09:50:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 09:50:35] Checking for apptainer binary...
[2026-01-12 09:50:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 09:50:35] Running /usr/bin/apptainer --version
[2026-01-12 09:50:35] apptainer version 1.4.1-1.1
[2026-01-12 09:50:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 09:50:35] magicA246
[2026-01-12 09:50:35] apptainer works
[2026-01-12 09:50:35] Set ATHENA_PROC_NUMBER=3
[2026-01-12 09:50:35] Set ATHENA_CORE_NUMBER=3
[2026-01-12 09:50:35] Starting ATLAS job with PandaID=6966843834
[2026-01-12 09:50:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 19:32:31]  *** The last 200 lines of the pilot log: ***
[2026-01-12 19:32:31] 2026-01-12 18:31:53,113 | INFO     | all job control threads have been joined
[2026-01-12 19:32:31] 2026-01-12 18:31:53,234 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-12 19:32:31] 2026-01-12 18:31:53,235 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-12 19:32:31] 2026-01-12 18:31:53,235 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 19:32:31] 2026-01-12 18:31:53,235 | INFO     | will abort loop
[2026-01-12 19:32:31] 2026-01-12 18:31:53,363 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 19:32:31] 2026-01-12 18:31:53,506 | INFO     | all data control threads have been joined
[2026-01-12 19:32:31] 2026-01-12 18:31:53,973 | INFO     | [job] retrieve thread has finished
[2026-01-12 19:32:31] 2026-01-12 18:31:53,973 | INFO     | [job] queue monitor thread has finished
[2026-01-12 19:32:31] 2026-01-12 18:31:54,018 | INFO     | [payload] control thread has finished
[2026-01-12 19:32:31] 2026-01-12 18:31:54,029 | INFO     | [payload] validate_post thread has finished
[2026-01-12 19:32:31] 2026-01-12 18:31:54,119 | INFO     | [job] control thread has finished
[2026-01-12 19:32:31] 2026-01-12 18:31:54,213 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 19:32:31] 2026-01-12 18:31:54,239 | INFO     | [job] job monitor thread has finished
[2026-01-12 19:32:31] 2026-01-12 18:31:54,512 | INFO     | [data] control thread has finished
[2026-01-12 19:32:31] 2026-01-12 18:31:54,599 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 19:32:31] 2026-01-12 18:31:54,742 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 19:32:31] 2026-01-12 18:31:55,102 | INFO     | [payload] failed_post thread has finished
[2026-01-12 19:32:31] 2026-01-12 18:31:55,313 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 19:32:31] 2026-01-12 18:31:55,331 | INFO     | [job] validate thread has finished
[2026-01-12 19:32:31] 2026-01-12 18:31:55,369 | INFO     | [data] copytool_out thread has finished
[2026-01-12 19:32:31] 2026-01-12 18:31:55,419 | INFO     | [data] copytool_in thread has finished
[2026-01-12 19:32:31] 2026-01-12 18:31:58,749 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 19:32:31] 2026-01-12 18:32:03,817 | INFO     | job.realtimelogging is not enabled
[2026-01-12 19:32:31] 2026-01-12 18:32:04,823 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 19:32:31] 2026-01-12 18:32:22,485 | INFO     | PID=3275359 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 19:32:31] 2026-01-12 18:32:22,485 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 19:32:31] 2026-01-12 18:32:22,485 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 19:32:31] 2026-01-12 18:32:22,485 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 19:32:31] 2026-01-12 18:32:25,589 | INFO     | [monitor] cgroup control has ended
[2026-01-12 19:32:31] 2026-01-12 18:32:26,376 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140341765842752)>', '<ExcThread(monitor, started 140340447135488)>']
[2026-01-12 19:32:31] 2026-01-12 18:32:26,507 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 19:32:31] 2026-01-12 18:32:26,507 | INFO     | [monitor] control thread has ended
[2026-01-12 19:32:31] 2026-01-12 18:32:31,401 | INFO     | all workflow threads have been joined
[2026-01-12 19:32:31] 2026-01-12 18:32:31,401 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 19:32:31] 2026-01-12 18:32:31,402 | INFO     | traces error code: 0
[2026-01-12 19:32:31] 2026-01-12 18:32:31,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 19:32:31] 2026-01-12 18:32:31,458 [wrapper] ==== pilot stdout END ====
[2026-01-12 19:32:31] 2026-01-12 18:32:31,461 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 19:32:31] 2026-01-12 18:32:31,463 [wrapper] pilotpid: 3275359
[2026-01-12 19:32:31] 2026-01-12 18:32:31,466 [wrapper] Pilot exit status: 0
[2026-01-12 19:32:31] 2026-01-12 18:32:31,474 [wrapper] pandaids: 6966843834
[2026-01-12 19:32:31] 2026-01-12 18:32:31,491 [wrapper] cleanup supervisor_pilot 3341959 3275360
[2026-01-12 19:32:31] 2026-01-12 18:32:31,494 [wrapper] Test setup, not cleaning
[2026-01-12 19:32:31] 2026-01-12 18:32:31,496 [wrapper] apfmon messages muted
[2026-01-12 19:32:31] 2026-01-12 18:32:31,499 [wrapper] ==== wrapper stdout END ====
[2026-01-12 19:32:31] 2026-01-12 18:32:31,502 [wrapper] ==== wrapper stderr END ====
[2026-01-12 19:32:31]  *** Error codes and diagnostics ***
[2026-01-12 19:32:31]     "exeErrorCode": 0,
[2026-01-12 19:32:31]     "exeErrorDiag": "",
[2026-01-12 19:32:31]     "pilotErrorCode": 0,
[2026-01-12 19:32:31]     "pilotErrorDiag": "",
[2026-01-12 19:32:31]  *** Listing of results directory ***
[2026-01-12 19:32:31] total 1488156
[2026-01-12 19:32:31] -rw-r--r-- 1 boinc boinc     579449 Jan 12 09:42 pilot3.tar.gz
[2026-01-12 19:32:31] -rw-r--r-- 1 boinc boinc       5112 Jan 12 09:47 queuedata.json
[2026-01-12 19:32:31] -rwx------ 1 boinc boinc      36322 Jan 12 09:48 runpilot2-wrapper.sh
[2026-01-12 19:32:31] -rw-r--r-- 1 boinc boinc        100 Jan 12 09:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 19:32:31] -rwxr-xr-x 1 boinc boinc       7986 Jan 12 09:50 run_atlas
[2026-01-12 19:32:31] -rw-r--r-- 1 boinc boinc        105 Jan 12 09:50 job.xml
[2026-01-12 19:32:31] -rw-r--r-- 2 boinc boinc  318861394 Jan 12 09:50 EVNT.48118027._000056.pool.root.1
[2026-01-12 19:32:31] -rw-r--r-- 2 boinc boinc     592611 Jan 12 09:50 input.tar.gz
[2026-01-12 19:32:31] -rw-r--r-- 2 boinc boinc      15847 Jan 12 09:50 start_atlas.sh
[2026-01-12 19:32:31] drwxrwx--x 2 boinc boinc       4096 Jan 12 09:50 shared
[2026-01-12 19:32:31] -rw-r--r-- 1 boinc boinc          0 Jan 12 09:50 boinc_setup_complete
[2026-01-12 19:32:31] -rw-r--r-- 1 boinc boinc       6448 Jan 12 09:50 init_data.xml
[2026-01-12 19:32:31] -rw-r--r-- 1 boinc boinc          0 Jan 12 09:50 boinc_lockfile
[2026-01-12 19:32:31] -rw-r--r-- 1 boinc boinc       2895 Jan 12 09:50 pandaJob.out
[2026-01-12 19:32:31] -rw------- 1 boinc boinc     987688 Jan 12 09:50 agis_schedconf.cvmfs.json
[2026-01-12 19:32:31] drwx------ 5 boinc boinc       4096 Jan 12 09:50 pilot3
[2026-01-12 19:32:31] -rw-r--r-- 1 boinc boinc        533 Jan 12 19:27 boinc_task_state.xml
[2026-01-12 19:32:31] -rw------- 1 boinc boinc 1188325552 Jan 12 19:31 HITS.48187943._000272.pool.root.1
[2026-01-12 19:32:31] -rw------- 1 boinc boinc         95 Jan 12 19:31 pilot_heartbeat.json
[2026-01-12 19:32:31] -rw------- 1 boinc boinc       1023 Jan 12 19:31 memory_monitor_summary.json
[2026-01-12 19:32:31] -rw------- 1 boinc boinc    1516240 Jan 12 19:31 agis_ddmendpoints.agis.ALL.json
[2026-01-12 19:32:31] -rw------- 1 boinc boinc    1472133 Jan 12 19:31 log.48187943._000272.job.log.tgz.1
[2026-01-12 19:32:31] -rw------- 1 boinc boinc      27337 Jan 12 19:31 heartbeat.json
[2026-01-12 19:32:31] -rw-r--r-- 1 boinc boinc       8192 Jan 12 19:32 boinc_mmap_file
[2026-01-12 19:32:31] -rw-r--r-- 1 boinc boinc         29 Jan 12 19:32 wrapper_checkpoint.txt
[2026-01-12 19:32:31] -rw------- 1 boinc boinc       5010 Jan 12 19:32 pilotlog.txt
[2026-01-12 19:32:31] -rw------- 1 boinc boinc    4902255 Jan 12 19:32 log.48187943._000272.job.log.1
[2026-01-12 19:32:31] -rw------- 1 boinc boinc        353 Jan 12 19:32 output.list
[2026-01-12 19:32:31] -rw-r--r-- 1 boinc boinc        620 Jan 12 19:32 runtime_log
[2026-01-12 19:32:31] -rw------- 1 boinc boinc    6410240 Jan 12 19:32 result.tar.gz
[2026-01-12 19:32:31] -rw-r--r-- 1 boinc boinc       8913 Jan 12 19:32 runtime_log.err
[2026-01-12 19:32:31] -rw------- 1 boinc boinc        670 Jan 12 19:32 WbPMDmAmSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmaBnKDmnjCXDn.diag
[2026-01-12 19:32:31] -rw-r--r-- 1 boinc boinc       7276 Jan 12 19:32 stderr.txt
[2026-01-12 19:32:31] HITS file was successfully produced:
[2026-01-12 19:32:31] -rw------- 1 boinc boinc 1188325552 Jan 12 19:31 shared/HITS.pool.root.1
[2026-01-12 19:32:31]  *** Contents of shared directory: ***
[2026-01-12 19:32:31] total 1478732
[2026-01-12 19:32:31] -rw-r--r-- 2 boinc boinc  318861394 Jan 12 09:50 ATLAS.root_0
[2026-01-12 19:32:31] -rw-r--r-- 2 boinc boinc     592611 Jan 12 09:50 input.tar.gz
[2026-01-12 19:32:31] -rw-r--r-- 2 boinc boinc      15847 Jan 12 09:50 start_atlas.sh
[2026-01-12 19:32:31] -rw------- 1 boinc boinc 1188325552 Jan 12 19:31 HITS.pool.root.1
[2026-01-12 19:32:31] -rw------- 1 boinc boinc    6410240 Jan 12 19:32 result.tar.gz
19:32:33 (3271091): run_atlas exited; CPU time 103157.092913
19:32:33 (3271091): called boinc_finish(0)

</stderr_txt>
]]>

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