Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:50:35 (3729984): wrapper (7.7.26015): starting
03:50:35 (3729984): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 03:50:35] Arguments: --nthreads 8
[2026-01-12 03:50:35] Threads: 8
[2026-01-12 03:50:35] Checking for CVMFS
[2026-01-12 03:50:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 03:50:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 03:50:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 03:50:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 03:50:35] 2.13.3.0 12977 97510 607340 155045 3 148 32931298 32935936 18556 16776704 0 423949907 99.550 512358785 33643 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 03:50:35] CVMFS is ok
[2026-01-12 03:50:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 03:50:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 03:50:35] Further information can be found at the LHC@home message board.
[2026-01-12 03:50:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 03:50:35] Checking for apptainer binary...
[2026-01-12 03:50:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 03:50:35] Running /usr/bin/apptainer --version
[2026-01-12 03:50:35] apptainer version 1.4.5-2.el9
[2026-01-12 03:50:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 03:50:36] c6-12-29-1.aglt2.org
[2026-01-12 03:50:36] apptainer works
[2026-01-12 03:50:36] Set ATHENA_PROC_NUMBER=8
[2026-01-12 03:50:36] Set ATHENA_CORE_NUMBER=8
[2026-01-12 03:50:36] Starting ATLAS job with PandaID=6966842719
[2026-01-12 03:50:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 05:46:13]  *** The last 200 lines of the pilot log: ***
[2026-01-13 05:46:13] 2026-01-13 10:44:54,934 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 05:46:13] 2026-01-13 10:44:55,008 | INFO     | fitting pss+swap vs Time
[2026-01-13 05:46:13] 2026-01-13 10:44:55,064 | INFO     | sum of square deviations: 1106178596448.0808
[2026-01-13 05:46:13] 2026-01-13 10:44:55,177 | INFO     | sum of deviations: 6221207345484.757
[2026-01-13 05:46:13] 2026-01-13 10:44:55,178 | INFO     | mean x: 1768254456.5719895
[2026-01-13 05:46:13] 2026-01-13 10:44:55,178 | INFO     | mean y: 3506093.7840314135
[2026-01-13 05:46:13] 2026-01-13 10:44:55,178 | INFO     | intersect: -9941251153.585238
[2026-01-13 05:46:13] 2026-01-13 10:44:55,179 | INFO     | chi2: 9.238825193373856
[2026-01-13 05:46:13] 2026-01-13 10:44:55,181 | INFO     | sum of square deviations: 1095355862330.7393
[2026-01-13 05:46:13] 2026-01-13 10:44:55,249 | INFO     | sum of deviations: 6862243659435.601
[2026-01-13 05:46:13] 2026-01-13 10:44:55,250 | INFO     | mean x: 1768254304.0820749
[2026-01-13 05:46:13] 2026-01-13 10:44:55,250 | INFO     | mean y: 3515124.747209455
[2026-01-13 05:46:13] 2026-01-13 10:44:55,250 | INFO     | intersect: -11074338478.589828
[2026-01-13 05:46:13] 2026-01-13 10:44:55,252 | INFO     | chi2: 5.921007796463474
[2026-01-13 05:46:13] 2026-01-13 10:44:55,252 | INFO     | current chi2=5.921007796463474 (change=35.91168062460952 %)
[2026-01-13 05:46:13] 2026-01-13 10:44:55,258 | INFO     | sum of square deviations: 1084603966750.5887
[2026-01-13 05:46:13] 2026-01-13 10:44:55,343 | INFO     | sum of deviations: 7394062150263.319
[2026-01-13 05:46:13] 2026-01-13 10:44:55,344 | INFO     | mean x: 1768254151.5922265
[2026-01-13 05:46:13] 2026-01-13 10:44:55,344 | INFO     | mean y: 3522663.2476943345
[2026-01-13 05:46:13] 2026-01-13 10:44:55,344 | INFO     | intersect: -12051182551.877745
[2026-01-13 05:46:13] 2026-01-13 10:44:55,346 | INFO     | chi2: 3.333168925234135
[2026-01-13 05:46:13] 2026-01-13 10:44:55,346 | INFO     | current chi2=3.333168925234135 (change=43.70605410746148 %)
[2026-01-13 05:46:13] 2026-01-13 10:44:55,352 | INFO     | sum of square deviations: 1073922399732.7299
[2026-01-13 05:46:13] 2026-01-13 10:44:55,440 | INFO     | sum of deviations: 7479366032978.645
[2026-01-13 05:46:13] 2026-01-13 10:44:55,440 | INFO     | mean x: 1768253999.1004627
[2026-01-13 05:46:13] 2026-01-13 10:44:55,440 | INFO     | mean y: 3523877.5155320554
[2026-01-13 05:46:13] 2026-01-13 10:44:55,440 | INFO     | intersect: -12311536225.37654
[2026-01-13 05:46:13] 2026-01-13 10:44:55,442 | INFO     | chi2: 3.034438383148245
[2026-01-13 05:46:13] 2026-01-13 10:44:55,442 | INFO     | current chi2=3.034438383148245 (change=8.962358307864829 %)
[2026-01-13 05:46:13] 2026-01-13 10:44:55,442 | INFO     | right removable region: 1512
[2026-01-13 05:46:13] 2026-01-13 10:44:55,448 | INFO     | sum of square deviations: 1095352998990.7386
[2026-01-13 05:46:13] 2026-01-13 10:44:55,529 | INFO     | sum of deviations: 5617198595609.692
[2026-01-13 05:46:13] 2026-01-13 10:44:55,530 | INFO     | mean x: 1768254609.0820749
[2026-01-13 05:46:13] 2026-01-13 10:44:55,530 | INFO     | mean y: 3514599.058437295
[2026-01-13 05:46:13] 2026-01-13 10:44:55,530 | INFO     | intersect: -9064463775.007418
[2026-01-13 05:46:13] 2026-01-13 10:44:55,536 | INFO     | chi2: 6.487920472039762
[2026-01-13 05:46:13] 2026-01-13 10:44:55,536 | INFO     | current chi2=6.487920472039762 (change=29.775481879525767 %)
[2026-01-13 05:46:13] 2026-01-13 10:44:55,538 | INFO     | sum of square deviations: 1084599169506.3667
[2026-01-13 05:46:13] 2026-01-13 10:44:55,623 | INFO     | sum of deviations: 5482064164574.073
[2026-01-13 05:46:13] 2026-01-13 10:44:55,624 | INFO     | mean x: 1768254761.585639
[2026-01-13 05:46:13] 2026-01-13 10:44:55,624 | INFO     | mean y: 3516515.122529644
[2026-01-13 05:46:13] 2026-01-13 10:44:55,624 | INFO     | intersect: -8934058152.888683
[2026-01-13 05:46:13] 2026-01-13 10:44:55,626 | INFO     | chi2: 6.440216681349234
[2026-01-13 05:46:13] 2026-01-13 10:44:55,626 | INFO     | current chi2=6.440216681349234 (change=0.735270891437573 %)
[2026-01-13 05:46:13] 2026-01-13 10:44:55,626 | INFO     | left removable region: 20
[2026-01-13 05:46:13] 2026-01-13 10:44:55,632 | INFO     | sum of square deviations: 1029818795632.4729
[2026-01-13 05:46:13] 2026-01-13 10:44:55,715 | INFO     | sum of deviations: 6537990905218.718
[2026-01-13 05:46:13] 2026-01-13 10:44:55,719 | INFO     | mean x: 1768254578.6172922
[2026-01-13 05:46:13] 2026-01-13 10:44:55,720 | INFO     | mean y: 3537193.1273458446
[2026-01-13 05:46:13] 2026-01-13 10:44:55,720 | INFO     | intersect: -11222546854.028755
[2026-01-13 05:46:13] 2026-01-13 10:44:55,722 | INFO     | chi2: 0.18706740220144683
[2026-01-13 05:46:13] 2026-01-13 10:44:55,722 | INFO     | current memory leak: 6.35 B/s (using 1492 data points, chi2=0.19)
[2026-01-13 05:46:13] 2026-01-13 10:44:55,728 | INFO     | could have reported an average CPU frequency of 2646 MHz (54 samples)
[2026-01-13 05:46:13] 2026-01-13 10:44:55,728 | INFO     | ..............................
[2026-01-13 05:46:13] 2026-01-13 10:44:55,728 | INFO     | . Timing measurements:
[2026-01-13 05:46:13] 2026-01-13 10:44:55,728 | INFO     | . get job = 0 s
[2026-01-13 05:46:13] 2026-01-13 10:44:55,728 | INFO     | . initial setup = 2 s
[2026-01-13 05:46:13] 2026-01-13 10:44:55,728 | INFO     | . payload setup = 10 s
[2026-01-13 05:46:13] 2026-01-13 10:44:55,728 | INFO     | . stage-in = 0 s
[2026-01-13 05:46:13] 2026-01-13 10:44:55,728 | INFO     | . payload execution = 93186 s
[2026-01-13 05:46:13] 2026-01-13 10:44:55,728 | INFO     | . stage-out = 10 s
[2026-01-13 05:46:13] 2026-01-13 10:44:55,728 | INFO     | . log creation = 1 s
[2026-01-13 05:46:13] 2026-01-13 10:44:55,729 | INFO     | ..............................
[2026-01-13 05:46:13] 2026-01-13 10:44:55,924 | INFO     | 
[2026-01-13 05:46:13] 2026-01-13 10:44:55,924 | INFO     | job summary report
[2026-01-13 05:46:13] 2026-01-13 10:44:55,924 | INFO     | --------------------------------------------------
[2026-01-13 05:46:13] 2026-01-13 10:44:55,924 | INFO     | PanDA job id: 6966842719
[2026-01-13 05:46:13] 2026-01-13 10:44:55,924 | INFO     | task id: 48187943
[2026-01-13 05:46:13] 2026-01-13 10:44:55,924 | INFO     | errors: (none)
[2026-01-13 05:46:13] 2026-01-13 10:44:55,924 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 05:46:13] 2026-01-13 10:44:55,924 | INFO     | pilot state: finished 
[2026-01-13 05:46:13] 2026-01-13 10:44:55,924 | INFO     | transexitcode: 0
[2026-01-13 05:46:13] 2026-01-13 10:44:55,924 | INFO     | exeerrorcode: 0
[2026-01-13 05:46:13] 2026-01-13 10:44:55,924 | INFO     | exeerrordiag: 
[2026-01-13 05:46:13] 2026-01-13 10:44:55,925 | INFO     | exitcode: 0
[2026-01-13 05:46:13] 2026-01-13 10:44:55,925 | INFO     | exitmsg: OK
[2026-01-13 05:46:13] 2026-01-13 10:44:55,925 | INFO     | cpuconsumptiontime: 320925 s
[2026-01-13 05:46:13] 2026-01-13 10:44:55,925 | INFO     | nevents: 2050
[2026-01-13 05:46:13] 2026-01-13 10:44:55,925 | INFO     | neventsw: 0
[2026-01-13 05:46:13] 2026-01-13 10:44:55,925 | INFO     | pid: 3764994
[2026-01-13 05:46:13] 2026-01-13 10:44:55,925 | INFO     | pgrp: 3764994
[2026-01-13 05:46:13] 2026-01-13 10:44:55,925 | INFO     | corecount: 8
[2026-01-13 05:46:13] 2026-01-13 10:44:55,925 | INFO     | event service: False
[2026-01-13 05:46:13] 2026-01-13 10:44:55,925 | INFO     | sizes: {0: 2284619, 1: 2284619, 5: 2284909, 11: 2284965, 93201: 2372411, 93202: 2372410, 93213: 2381592, 93217: 2381648, 93232: 2381894}
[2026-01-13 05:46:13] 2026-01-13 10:44:55,925 | INFO     | --------------------------------------------------
[2026-01-13 05:46:13] 2026-01-13 10:44:55,925 | INFO     | 
[2026-01-13 05:46:13] 2026-01-13 10:44:55,925 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-13 05:46:13] 2026-01-13 10:44:55,998 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 05:46:13] 2026-01-13 10:44:55,998 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 05:46:13] 2026-01-13 10:44:55,998 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 05:46:13] 2026-01-13 10:44:55,998 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 05:46:13] 2026-01-13 10:44:55,998 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 05:46:13] 2026-01-13 10:44:55,998 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 05:46:13] 2026-01-13 10:44:55,998 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 05:46:13] 2026-01-13 10:44:55,998 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 05:46:13] 2026-01-13 10:44:55,999 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 05:46:13] 2026-01-13 10:44:55,999 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 05:46:13] 2026-01-13 10:44:55,999 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 05:46:13] 2026-01-13 10:44:55,999 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 05:46:13] 2026-01-13 10:44:55,999 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 05:46:13] 2026-01-13 10:44:55,999 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 05:46:13] 2026-01-13 10:44:55,999 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 05:46:13] 2026-01-13 10:44:55,999 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 05:46:13] 2026-01-13 10:44:55,999 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 05:46:13] 2026-01-13 10:44:55,999 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 05:46:13] 2026-01-13 10:44:55,999 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 05:46:13] 2026-01-13 10:44:55,999 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 05:46:13] 2026-01-13 10:44:56,000 | INFO     | job 6966842719 has completed (purged errors)
[2026-01-13 05:46:13] 2026-01-13 10:44:56,000 | INFO     | overall cleanup function is called
[2026-01-13 05:46:13] 2026-01-13 10:44:57,033 | INFO     | --- collectZombieJob: --- 10, [3764994]
[2026-01-13 05:46:13] 2026-01-13 10:44:57,034 | INFO     | zombie collector waiting for pid 3764994
[2026-01-13 05:46:13] 2026-01-13 10:44:57,034 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 05:46:13] 2026-01-13 10:44:57,034 | INFO     | collected zombie processes
[2026-01-13 05:46:13] 2026-01-13 10:44:57,034 | INFO     | will attempt to kill all subprocesses of pid=3764994
[2026-01-13 05:46:13] 2026-01-13 10:44:58,067 | INFO     | process IDs to be killed: [3764994] (in reverse order)
[2026-01-13 05:46:13] 2026-01-13 10:44:58,473 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 05:46:13] 2026-01-13 10:44:58,473 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 05:46:13] 2026-01-13 10:44:58,509 | INFO     | did not find any defunct processes belonging to 3764994
[2026-01-13 05:46:13] 2026-01-13 10:44:58,543 | INFO     | did not find any defunct processes belonging to 3764994
[2026-01-13 05:46:13] 2026-01-13 10:44:58,544 | INFO     | ready for new job
[2026-01-13 05:46:13] 2026-01-13 10:44:58,544 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 05:46:13] 2026-01-13 10:44:58,559 | INFO     | ***************************************
[2026-01-13 05:46:13] 2026-01-13 10:44:58,559 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 05:46:13] 2026-01-13 10:44:58,559 | INFO     | ***************************************
[2026-01-13 05:46:13] 2026-01-13 10:44:58,559 | INFO     | 
[2026-01-13 05:46:13] 2026-01-13 10:44:58,570 | INFO     | architecture information:
[2026-01-13 05:46:13] 2026-01-13 10:44:58,580 | INFO     | executing command: cat /etc/os-release
[2026-01-13 05:46:13] 2026-01-13 10:44:58,633 | INFO     | cat /etc/os-release:
[2026-01-13 05:46:13] NAME="CentOS Linux"
[2026-01-13 05:46:13] VERSION="7 (Core)"
[2026-01-13 05:46:13] ID="centos"
[2026-01-13 05:46:13] ID_LIKE="rhel fedora"
[2026-01-13 05:46:13] VERSION_ID="7"
[2026-01-13 05:46:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 05:46:13] ANSI_COLOR="0;31"
[2026-01-13 05:46:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 05:46:13] HOME_URL="https://www.centos.org/"
[2026-01-13 05:46:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 05:46:13] 
[2026-01-13 05:46:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 05:46:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 05:46:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 05:46:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 05:46:13] 
[2026-01-13 05:46:13] 2026-01-13 10:44:58,633 | INFO     | ***************************************
[2026-01-13 05:46:13] 2026-01-13 10:44:59,137 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-13 05:46:13] 2026-01-13 10:44:59,185 | INFO     | sufficient remaining disk space (91111817216 B)
[2026-01-13 05:46:13] 2026-01-13 10:44:59,185 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 05:46:13] 2026-01-13 10:44:59,185 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 05:46:13] 2026-01-13 10:44:59,185 | INFO     | update_server=False
[2026-01-13 05:46:13] 2026-01-13 10:44:59,185 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 05:46:13] 2026-01-13 10:44:59,316 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 05:46:13] 2026-01-13 10:44:59,317 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 05:46:13] 2026-01-13 10:44:59,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 05:46:13] 2026-01-13 10:44:59,317 | INFO     | will abort loop
[2026-01-13 05:46:13] 2026-01-13 10:44:59,569 | INFO     | all payload control threads have been joined
[2026-01-13 05:46:13] 2026-01-13 10:44:59,995 | INFO     | all data control threads have been joined
[2026-01-13 05:46:13] 2026-01-13 10:45:00,193 | INFO     | [job] retrieve thread has finished
[2026-01-13 05:46:13] 2026-01-13 10:45:00,323 | INFO     | [job] job monitor thread has finished
[2026-01-13 05:46:13] 2026-01-13 10:45:00,364 | INFO     | [data] copytool_in thread has finished
[2026-01-13 05:46:13] 2026-01-13 10:45:00,387 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 05:46:13] 2026-01-13 10:45:00,396 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 05:46:13] 2026-01-13 10:45:00,396 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 05:46:13] 2026-01-13 10:45:00,471 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 05:46:13] 2026-01-13 10:45:00,521 | INFO     | all job control threads have been joined
[2026-01-13 05:46:13] 2026-01-13 10:45:00,541 | INFO     | [payload] validate_post thread has finished
[2026-01-13 05:46:13] 2026-01-13 10:45:00,576 | INFO     | [payload] control thread has finished
[2026-01-13 05:46:13] 2026-01-13 10:45:00,945 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 05:46:13] 2026-01-13 10:45:00,997 | INFO     | [payload] failed_post thread has finished
[2026-01-13 05:46:13] 2026-01-13 10:45:01,001 | INFO     | [data] control thread has finished
[2026-01-13 05:46:13] 2026-01-13 10:45:01,135 | INFO     | [job] validate thread has finished
[2026-01-13 05:46:13] 2026-01-13 10:45:01,395 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 05:46:13] 2026-01-13 10:45:01,466 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 05:46:13] 2026-01-13 10:45:01,544 | INFO     | [job] control thread has finished
[2026-01-13 05:46:13] 2026-01-13 10:45:01,957 | INFO     | [job] queue monitor thread has finished
[2026-01-13 05:46:13] 2026-01-13 10:45:02,398 | INFO     | [data] copytool_out thread has finished
[2026-01-13 05:46:13] 2026-01-13 10:45:04,499 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 05:46:13] 2026-01-13 10:45:28,401 | INFO     | PID=3737056 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 05:46:13] 2026-01-13 10:45:28,401 | INFO     | .. there are 23 such processes running
[2026-01-13 05:46:13] 2026-01-13 10:45:28,402 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 05:46:13] 2026-01-13 10:45:28,402 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 05:46:13] 2026-01-13 10:45:28,404 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 05:46:13] 2026-01-13 10:45:37,169 | INFO     | [monitor] cgroup control has ended
[2026-01-13 05:46:13] 2026-01-13 10:45:38,859 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140517061072704)>', '<ExcThread(monitor, started 140516280751872)>']
[2026-01-13 05:46:13] 2026-01-13 10:45:39,468 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 05:46:13] 2026-01-13 10:45:39,469 | INFO     | [monitor] control thread has ended
[2026-01-13 05:46:13] 2026-01-13 10:45:43,887 | INFO     | all workflow threads have been joined
[2026-01-13 05:46:13] 2026-01-13 10:45:43,888 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 05:46:13] 2026-01-13 10:45:43,888 | INFO     | traces error code: 0
[2026-01-13 05:46:13] 2026-01-13 10:45:43,888 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 05:46:13] 2026-01-13 10:45:44,451 [wrapper] ==== pilot stdout END ====
[2026-01-13 05:46:13] 2026-01-13 10:45:44,454 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 05:46:13] 2026-01-13 10:45:44,457 [wrapper] pilotpid: 3737056
[2026-01-13 05:46:13] 2026-01-13 10:45:44,459 [wrapper] Pilot exit status: 0
[2026-01-13 05:46:13] 2026-01-13 10:45:44,483 [wrapper] pandaids: 6966842719
[2026-01-13 05:46:13] 2026-01-13 10:45:44,581 [wrapper] cleanup supervisor_pilot 2976557 3737058
[2026-01-13 05:46:13] 2026-01-13 10:45:44,584 [wrapper] Test setup, not cleaning
[2026-01-13 05:46:13] 2026-01-13 10:45:44,586 [wrapper] apfmon messages muted
[2026-01-13 05:46:13] 2026-01-13 10:45:44,591 [wrapper] ==== wrapper stdout END ====
[2026-01-13 05:46:13] 2026-01-13 10:45:44,594 [wrapper] ==== wrapper stderr END ====
[2026-01-13 05:46:13]  *** Error codes and diagnostics ***
[2026-01-13 05:46:13]     "exeErrorCode": 0,
[2026-01-13 05:46:13]     "exeErrorDiag": "",
[2026-01-13 05:46:13]     "pilotErrorCode": 0,
[2026-01-13 05:46:13]     "pilotErrorDiag": "",
[2026-01-13 05:46:13]  *** Listing of results directory ***
[2026-01-13 05:46:13] total 1508176
[2026-01-13 05:46:13] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 03:42 pilot3.tar.gz
[2026-01-13 05:46:13] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 03:47 queuedata.json
[2026-01-13 05:46:13] -rwx------. 1 boincer umatlas      36322 Jan 12 03:48 runpilot2-wrapper.sh
[2026-01-13 05:46:13] -rw-r--r--. 1 boincer umatlas        100 Jan 12 03:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 05:46:13] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 03:50 run_atlas
[2026-01-13 05:46:13] -rw-r--r--. 1 boincer umatlas        105 Jan 12 03:50 job.xml
[2026-01-13 05:46:13] -rw-r--r--. 2 boincer umatlas  321829570 Jan 12 03:50 EVNT.48118027._000047.pool.root.1
[2026-01-13 05:46:13] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 03:50 start_atlas.sh
[2026-01-13 05:46:13] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 03:50 shared
[2026-01-13 05:46:13] -rw-r--r--. 2 boincer umatlas     592613 Jan 12 03:50 input.tar.gz
[2026-01-13 05:46:13] -rw-r--r--. 1 boincer umatlas          0 Jan 12 03:50 boinc_lockfile
[2026-01-13 05:46:13] -rw-r--r--. 1 boincer umatlas       2895 Jan 12 03:50 pandaJob.out
[2026-01-13 05:46:13] -rw-------. 1 boincer umatlas         57 Jan 12 03:50 setup.sh.local
[2026-01-13 05:46:13] -rw-------. 1 boincer umatlas     987688 Jan 12 03:50 agis_schedconf.cvmfs.json
[2026-01-13 05:46:13] drwx------. 5 boincer umatlas       4096 Jan 12 03:50 pilot3
[2026-01-13 05:46:13] -rw-r--r--. 1 boincer umatlas        533 Jan 13 05:31 boinc_task_state.xml
[2026-01-13 05:46:13] -rw-r--r--. 1 boincer umatlas       6880 Jan 13 05:38 init_data.xml
[2026-01-13 05:46:13] -rw-------. 1 boincer umatlas 1190866062 Jan 13 05:42 HITS.48187943._000228.pool.root.1
[2026-01-13 05:46:13] -rw-------. 1 boincer umatlas       1055 Jan 13 05:44 memory_monitor_summary.json
[2026-01-13 05:46:13] -rw-------. 1 boincer umatlas    1516240 Jan 13 05:44 agis_ddmendpoints.agis.ALL.json
[2026-01-13 05:46:13] -rw-------. 1 boincer umatlas    2812383 Jan 13 05:44 log.48187943._000228.job.log.tgz.1
[2026-01-13 05:46:13] -rw-------. 1 boincer umatlas      28015 Jan 13 05:44 heartbeat.json
[2026-01-13 05:46:13] -rw-------. 1 boincer umatlas         95 Jan 13 05:45 pilot_heartbeat.json
[2026-01-13 05:46:13] -rw-------. 1 boincer umatlas       5010 Jan 13 05:45 pilotlog.txt
[2026-01-13 05:46:13] -rw-------. 1 boincer umatlas   11048902 Jan 13 05:45 log.48187943._000228.job.log.1
[2026-01-13 05:46:13] -rw-------. 1 boincer umatlas        353 Jan 13 05:45 output.list
[2026-01-13 05:46:13] -rw-r--r--. 1 boincer umatlas        620 Jan 13 05:45 runtime_log
[2026-01-13 05:46:13] -rw-------. 1 boincer umatlas   13895680 Jan 13 05:45 result.tar.gz
[2026-01-13 05:46:13] -rw-r--r--. 1 boincer umatlas       9353 Jan 13 05:45 runtime_log.err
[2026-01-13 05:46:13] -rw-------. 1 boincer umatlas        662 Jan 13 05:45 dI8LDmAmSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLBnKDmbrwApm.diag
[2026-01-13 05:46:13] -rw-r--r--. 1 boincer umatlas       8192 Jan 13 05:46 boinc_mmap_file
[2026-01-13 05:46:13] -rw-r--r--. 1 boincer umatlas         29 Jan 13 05:46 wrapper_checkpoint.txt
[2026-01-13 05:46:13] -rw-r--r--. 1 boincer umatlas      21051 Jan 13 05:46 stderr.txt
[2026-01-13 05:46:13] HITS file was successfully produced:
[2026-01-13 05:46:13] -rw-------. 1 boincer umatlas 1190866062 Jan 13 05:42 shared/HITS.pool.root.1
[2026-01-13 05:46:13]  *** Contents of shared directory: ***
[2026-01-13 05:46:13] total 1491420
[2026-01-13 05:46:13] -rw-r--r--. 2 boincer umatlas  321829570 Jan 12 03:50 ATLAS.root_0
[2026-01-13 05:46:13] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 03:50 start_atlas.sh
[2026-01-13 05:46:13] -rw-r--r--. 2 boincer umatlas     592613 Jan 12 03:50 input.tar.gz
[2026-01-13 05:46:13] -rw-------. 1 boincer umatlas 1190866062 Jan 13 05:42 HITS.pool.root.1
[2026-01-13 05:46:13] -rw-------. 1 boincer umatlas   13895680 Jan 13 05:45 result.tar.gz
05:46:15 (3729984): run_atlas exited; CPU time 323659.150144
05:46:15 (3729984): called boinc_finish(0)

</stderr_txt>
]]>

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