Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:49:56 (2852420): wrapper (7.7.26015): starting
03:49:56 (2852420): wrapper: running run_atlas (--nthreads 10)
[2026-01-12 03:49:56] Arguments: --nthreads 10
[2026-01-12 03:49:56] Threads: 10
[2026-01-12 03:49:56] Checking for CVMFS
[2026-01-12 03:49:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 03:49:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 03:49:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 03:49:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 03:49:58] 2.13.3.0 9724 27643 247716 155045 3 373 40943084 40960000 9713 16776704 0 18982690 99.616 17697846 37631 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 03:49:58] CVMFS is ok
[2026-01-12 03:49:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 03:49:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 03:49:58] Further information can be found at the LHC@home message board.
[2026-01-12 03:49:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 03:49:58] Checking for apptainer binary...
[2026-01-12 03:49:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 03:49:58] Running /usr/bin/apptainer --version
[2026-01-12 03:49:58] apptainer version 1.4.5-2.el9
[2026-01-12 03:49:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 03:49:59] c-210-33-3.aglt2.org
[2026-01-12 03:49:59] apptainer works
[2026-01-12 03:50:00] Set ATHENA_PROC_NUMBER=10
[2026-01-12 03:50:00] Set ATHENA_CORE_NUMBER=10
[2026-01-12 03:50:00] Starting ATLAS job with PandaID=6966843210
[2026-01-12 03:50:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 22:16:32]  *** The last 200 lines of the pilot log: ***
[2026-01-13 22:16:32] 2026-01-14 01:47:09,386 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 22:16:32] 2026-01-14 01:47:10,793 | INFO     | time since job start (147369s) is within the limit (349056.0s)
[2026-01-13 22:16:32] 2026-01-14 01:47:11,903 | INFO     | monitor loop #9101: job 0:6966843210 is in state 'finished'
[2026-01-13 22:16:32] 2026-01-14 01:47:11,904 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 22:16:32] 2026-01-14 01:47:12,812 | INFO     | time since job start (147371s) is within the limit (349056.0s)
[2026-01-13 22:16:32] 2026-01-14 01:47:14,413 | INFO     | monitor loop #9102: job 0:6966843210 is in state 'finished'
[2026-01-13 22:16:32] 2026-01-14 01:47:14,414 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 22:16:32] 2026-01-14 01:47:14,819 | INFO     | time since job start (147373s) is within the limit (349056.0s)
[2026-01-13 22:16:32] 2026-01-14 01:47:16,826 | INFO     | time since job start (147375s) is within the limit (349056.0s)
[2026-01-13 22:16:32] 2026-01-14 01:47:16,919 | INFO     | monitor loop #9103: job 0:6966843210 is in state 'finished'
[2026-01-13 22:16:32] 2026-01-14 01:47:16,920 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 22:16:32] 2026-01-14 01:47:18,481 | INFO     | PID=2861539 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 22:16:32] 2026-01-14 01:47:18,482 | INFO     | .. there are 10 such processes running
[2026-01-13 22:16:32] 2026-01-14 01:47:19,337 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-13 22:16:32] 2026-01-14 01:47:19,365 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2995.9186249999993
[2026-01-13 22:16:32] 2026-01-14 01:47:19,387 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966843210/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 22:16:32] 2026-01-14 01:47:19,387 | INFO     | extracted standard info from prmon json
[2026-01-13 22:16:32] 2026-01-14 01:47:19,388 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 22:16:32] 2026-01-14 01:47:19,388 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 22:16:32] 2026-01-14 01:47:19,499 | INFO     | time since job start (147378s) is within the limit (349056.0s)
[2026-01-13 22:16:32] 2026-01-14 01:47:19,514 | INFO     | monitor loop #9104: job 0:6966843210 is in state 'finished'
[2026-01-13 22:16:32] 2026-01-14 01:47:19,515 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 22:16:32] 2026-01-14 01:47:19,554 | INFO     | fitting pss+swap vs Time
[2026-01-13 22:16:32] 2026-01-14 01:47:19,558 | INFO     | sum of square deviations: 4362379325702.096
[2026-01-13 22:16:32] 2026-01-14 01:47:19,800 | INFO     | sum of deviations: 13034733960439.178
[2026-01-13 22:16:32] 2026-01-14 01:47:19,800 | INFO     | mean x: 1768281575.918807
[2026-01-13 22:16:32] 2026-01-14 01:47:19,804 | INFO     | mean y: 3910444.449875725
[2026-01-13 22:16:32] 2026-01-14 01:47:19,805 | INFO     | intersect: -5279692421.868537
[2026-01-13 22:16:32] 2026-01-14 01:47:19,807 | INFO     | chi2: 19.93251285526035
[2026-01-13 22:16:32] 2026-01-14 01:47:19,814 | INFO     | sum of square deviations: 4335336951594.4683
[2026-01-13 22:16:32] 2026-01-14 01:47:20,092 | INFO     | sum of deviations: 14186721322523.244
[2026-01-13 22:16:32] 2026-01-14 01:47:20,093 | INFO     | mean x: 1768281423.4362807
[2026-01-13 22:16:32] 2026-01-14 01:47:20,093 | INFO     | mean y: 3916939.6496471567
[2026-01-13 22:16:32] 2026-01-14 01:47:20,093 | INFO     | intersect: -5782511209.80687
[2026-01-13 22:16:32] 2026-01-14 01:47:20,096 | INFO     | chi2: 16.439809091393975
[2026-01-13 22:16:32] 2026-01-14 01:47:20,097 | INFO     | current chi2=16.439809091393975 (change=17.52264648832082 %)
[2026-01-13 22:16:32] 2026-01-14 01:47:20,097 | INFO     | right removable region: 2408
[2026-01-13 22:16:32] 2026-01-14 01:47:20,100 | INFO     | sum of square deviations: 4335324554564.4663
[2026-01-13 22:16:32] 2026-01-14 01:47:20,321 | INFO     | sum of deviations: 11861581351522.795
[2026-01-13 22:16:32] 2026-01-14 01:47:20,322 | INFO     | mean x: 1768281728.4362807
[2026-01-13 22:16:32] 2026-01-14 01:47:20,322 | INFO     | mean y: 3917056.672893317
[2026-01-13 22:16:32] 2026-01-14 01:47:20,322 | INFO     | intersect: -4834156151.058477
[2026-01-13 22:16:32] 2026-01-14 01:47:20,325 | INFO     | chi2: 16.66392224734978
[2026-01-13 22:16:32] 2026-01-14 01:47:20,326 | INFO     | current chi2=16.66392224734978 (change=16.3982867170105 %)
[2026-01-13 22:16:32] 2026-01-14 01:47:20,326 | INFO     | left removable region: 10
[2026-01-13 22:16:32] 2026-01-14 01:47:20,329 | INFO     | sum of square deviations: 4276215656727.4604
[2026-01-13 22:16:32] 2026-01-14 01:47:20,679 | INFO     | sum of deviations: 12837727079514.346
[2026-01-13 22:16:32] 2026-01-14 01:47:20,679 | INFO     | mean x: 1768281697.9674728
[2026-01-13 22:16:32] 2026-01-14 01:47:20,679 | INFO     | mean y: 3927089.2610508758
[2026-01-13 22:16:32] 2026-01-14 01:47:20,680 | INFO     | intersect: -5304672771.106897
[2026-01-13 22:16:32] 2026-01-14 01:47:20,688 | INFO     | chi2: 12.167353922350747
[2026-01-13 22:16:32] 2026-01-14 01:47:20,688 | INFO     | current memory leak: 3.00 B/s (using 2398 data points, chi2=12.17)
[2026-01-13 22:16:32] 2026-01-14 01:47:20,695 | INFO     | could have reported an average CPU frequency of 2988 MHz (83 samples)
[2026-01-13 22:16:32] 2026-01-14 01:47:20,695 | INFO     | ..............................
[2026-01-13 22:16:32] 2026-01-14 01:47:20,695 | INFO     | . Timing measurements:
[2026-01-13 22:16:32] 2026-01-14 01:47:20,695 | INFO     | . get job = 0 s
[2026-01-13 22:16:32] 2026-01-14 01:47:20,695 | INFO     | . initial setup = 4 s
[2026-01-13 22:16:32] 2026-01-14 01:47:20,695 | INFO     | . payload setup = 36 s
[2026-01-13 22:16:32] 2026-01-14 01:47:20,695 | INFO     | . stage-in = 0 s
[2026-01-13 22:16:32] 2026-01-14 01:47:20,696 | INFO     | . payload execution = 147219 s
[2026-01-13 22:16:32] 2026-01-14 01:47:20,696 | INFO     | . stage-out = 13 s
[2026-01-13 22:16:32] 2026-01-14 01:47:20,696 | INFO     | . log creation = 3 s
[2026-01-13 22:16:32] 2026-01-14 01:47:20,696 | INFO     | ..............................
[2026-01-13 22:16:32] 2026-01-14 01:47:20,915 | INFO     | 
[2026-01-13 22:16:32] 2026-01-14 01:47:20,916 | INFO     | job summary report
[2026-01-13 22:16:32] 2026-01-14 01:47:20,916 | INFO     | --------------------------------------------------
[2026-01-13 22:16:32] 2026-01-14 01:47:20,916 | INFO     | PanDA job id: 6966843210
[2026-01-13 22:16:32] 2026-01-14 01:47:20,916 | INFO     | task id: 48187943
[2026-01-13 22:16:32] 2026-01-14 01:47:20,916 | INFO     | errors: (none)
[2026-01-13 22:16:32] 2026-01-14 01:47:20,916 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 22:16:32] 2026-01-14 01:47:20,916 | INFO     | pilot state: finished 
[2026-01-13 22:16:32] 2026-01-14 01:47:20,916 | INFO     | transexitcode: 0
[2026-01-13 22:16:32] 2026-01-14 01:47:20,916 | INFO     | exeerrorcode: 0
[2026-01-13 22:16:32] 2026-01-14 01:47:20,916 | INFO     | exeerrordiag: 
[2026-01-13 22:16:32] 2026-01-14 01:47:20,916 | INFO     | exitcode: 0
[2026-01-13 22:16:32] 2026-01-14 01:47:20,917 | INFO     | exitmsg: OK
[2026-01-13 22:16:32] 2026-01-14 01:47:20,917 | INFO     | cpuconsumptiontime: 290452 s
[2026-01-13 22:16:32] 2026-01-14 01:47:20,917 | INFO     | nevents: 2050
[2026-01-13 22:16:32] 2026-01-14 01:47:20,917 | INFO     | neventsw: 0
[2026-01-13 22:16:32] 2026-01-14 01:47:20,917 | INFO     | pid: 2880436
[2026-01-13 22:16:32] 2026-01-14 01:47:20,917 | INFO     | pgrp: 2880436
[2026-01-13 22:16:32] 2026-01-14 01:47:20,917 | INFO     | corecount: 10
[2026-01-13 22:16:32] 2026-01-14 01:47:20,917 | INFO     | event service: False
[2026-01-13 22:16:32] 2026-01-14 01:47:20,917 | INFO     | sizes: {0: 2283791, 1: 2284392, 2: 2284504, 3: 2284532, 4: 2284703, 15: 2284731, 26: 2284887, 30: 2285177, 37: 2285205, 147260: 2399343, 147261: 2399342, 147274: 2
[2026-01-13 22:16:32] 2026-01-14 01:47:20,917 | INFO     | --------------------------------------------------
[2026-01-13 22:16:32] 2026-01-14 01:47:20,917 | INFO     | 
[2026-01-13 22:16:32] 2026-01-14 01:47:20,917 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-13 22:16:32] 2026-01-14 01:47:21,162 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 22:16:32] 2026-01-14 01:47:21,162 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 22:16:32] 2026-01-14 01:47:21,162 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 22:16:32] 2026-01-14 01:47:21,162 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 22:16:32] 2026-01-14 01:47:21,162 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 22:16:32] 2026-01-14 01:47:21,162 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 22:16:32] 2026-01-14 01:47:21,163 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 22:16:32] 2026-01-14 01:47:21,163 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 22:16:32] 2026-01-14 01:47:21,163 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 22:16:32] 2026-01-14 01:47:21,163 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 22:16:32] 2026-01-14 01:47:21,163 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 22:16:32] 2026-01-14 01:47:21,163 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 22:16:32] 2026-01-14 01:47:21,163 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 22:16:32] 2026-01-14 01:47:21,163 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 22:16:32] 2026-01-14 01:47:21,163 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 22:16:32] 2026-01-14 01:47:21,163 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 22:16:32] 2026-01-14 01:47:21,163 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 22:16:32] 2026-01-14 01:47:21,163 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 22:16:32] 2026-01-14 01:47:21,163 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 22:16:32] 2026-01-14 01:47:21,164 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 22:16:32] 2026-01-14 01:47:21,164 | INFO     | job 6966843210 has completed (purged errors)
[2026-01-13 22:16:32] 2026-01-14 01:47:21,164 | INFO     | overall cleanup function is called
[2026-01-13 22:16:32] 2026-01-14 01:47:22,195 | INFO     | --- collectZombieJob: --- 10, [2880436]
[2026-01-13 22:16:32] 2026-01-14 01:47:22,196 | INFO     | zombie collector waiting for pid 2880436
[2026-01-13 22:16:32] 2026-01-14 01:47:22,196 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 22:16:32] 2026-01-14 01:47:22,196 | INFO     | collected zombie processes
[2026-01-13 22:16:32] 2026-01-14 01:47:22,196 | INFO     | will attempt to kill all subprocesses of pid=2880436
[2026-01-13 22:16:32] 2026-01-14 01:47:23,220 | INFO     | process IDs to be killed: [2880436] (in reverse order)
[2026-01-13 22:16:32] 2026-01-14 01:47:23,362 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 22:16:32] 2026-01-14 01:47:23,363 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 22:16:32] 2026-01-14 01:47:23,419 | INFO     | did not find any defunct processes belonging to 2880436
[2026-01-13 22:16:32] 2026-01-14 01:47:23,444 | INFO     | did not find any defunct processes belonging to 2880436
[2026-01-13 22:16:32] 2026-01-14 01:47:23,445 | INFO     | ready for new job
[2026-01-13 22:16:32] 2026-01-14 01:47:23,445 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 22:16:32] 2026-01-14 01:47:23,455 | INFO     | ***************************************
[2026-01-13 22:16:32] 2026-01-14 01:47:23,455 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 22:16:32] 2026-01-14 01:47:23,455 | INFO     | ***************************************
[2026-01-13 22:16:32] 2026-01-14 01:47:23,455 | INFO     | 
[2026-01-13 22:16:32] 2026-01-14 01:47:23,459 | INFO     | architecture information:
[2026-01-13 22:16:32] 2026-01-14 01:47:23,470 | INFO     | executing command: cat /etc/os-release
[2026-01-13 22:16:32] 2026-01-14 01:47:23,604 | INFO     | cat /etc/os-release:
[2026-01-13 22:16:32] NAME="CentOS Linux"
[2026-01-13 22:16:32] VERSION="7 (Core)"
[2026-01-13 22:16:32] ID="centos"
[2026-01-13 22:16:32] ID_LIKE="rhel fedora"
[2026-01-13 22:16:32] VERSION_ID="7"
[2026-01-13 22:16:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 22:16:32] ANSI_COLOR="0;31"
[2026-01-13 22:16:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 22:16:32] HOME_URL="https://www.centos.org/"
[2026-01-13 22:16:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 22:16:32] 
[2026-01-13 22:16:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 22:16:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 22:16:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 22:16:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 22:16:32] 
[2026-01-13 22:16:32] 2026-01-14 01:47:23,604 | INFO     | ***************************************
[2026-01-13 22:16:32] 2026-01-14 01:47:24,108 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-13 22:16:32] 2026-01-14 01:47:24,255 | INFO     | sufficient remaining disk space (71810678784 B)
[2026-01-13 22:16:32] 2026-01-14 01:47:24,256 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 22:16:32] 2026-01-14 01:47:24,256 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 22:16:32] 2026-01-14 01:47:24,256 | INFO     | update_server=False
[2026-01-13 22:16:32] 2026-01-14 01:47:24,256 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 22:16:32] 2026-01-14 01:47:24,257 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 22:16:32] 2026-01-14 01:47:24,542 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 22:16:32] 2026-01-14 01:47:24,543 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 22:16:32] 2026-01-14 01:47:24,543 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 22:16:32] 2026-01-14 01:47:24,543 | INFO     | will abort loop
[2026-01-13 22:16:32] 2026-01-14 01:47:24,756 | INFO     | all data control threads have been joined
[2026-01-13 22:16:32] 2026-01-14 01:47:24,934 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 22:16:32] 2026-01-14 01:47:25,110 | INFO     | all job control threads have been joined
[2026-01-13 22:16:32] 2026-01-14 01:47:25,159 | INFO     | all payload control threads have been joined
[2026-01-13 22:16:32] 2026-01-14 01:47:25,307 | INFO     | [job] retrieve thread has finished
[2026-01-13 22:16:32] 2026-01-14 01:47:25,372 | INFO     | [job] validate thread has finished
[2026-01-13 22:16:32] 2026-01-14 01:47:25,372 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 22:16:32] 2026-01-14 01:47:25,405 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 22:16:32] 2026-01-14 01:47:25,458 | INFO     | [data] copytool_in thread has finished
[2026-01-13 22:16:32] 2026-01-14 01:47:25,549 | INFO     | [job] job monitor thread has finished
[2026-01-13 22:16:32] 2026-01-14 01:47:25,762 | INFO     | [data] control thread has finished
[2026-01-13 22:16:32] 2026-01-14 01:47:25,926 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 22:16:32] 2026-01-14 01:47:25,996 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 22:16:32] 2026-01-14 01:47:26,107 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 22:16:32] 2026-01-14 01:47:26,117 | INFO     | [job] control thread has finished
[2026-01-13 22:16:32] 2026-01-14 01:47:26,166 | INFO     | [payload] control thread has finished
[2026-01-13 22:16:32] 2026-01-14 01:47:26,265 | INFO     | [data] copytool_out thread has finished
[2026-01-13 22:16:32] 2026-01-14 01:47:26,468 | INFO     | [payload] failed_post thread has finished
[2026-01-13 22:16:32] 2026-01-14 01:47:26,562 | INFO     | [payload] validate_post thread has finished
[2026-01-13 22:16:32] 2026-01-14 01:47:26,934 | INFO     | [job] queue monitor thread has finished
[2026-01-13 22:16:32] 2026-01-14 01:47:28,160 | INFO     | [monitor] cgroup control has ended
[2026-01-13 22:16:32] 2026-01-14 01:47:28,948 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 22:16:32] 2026-01-14 01:47:29,491 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140371690628928)>', '<ExcThread(monitor, started 140371300427520)>']
[2026-01-13 22:16:32] 2026-01-14 01:47:34,517 | INFO     | all workflow threads have been joined
[2026-01-13 22:16:32] 2026-01-14 01:47:34,518 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 22:16:32] 2026-01-14 01:47:34,518 | INFO     | traces error code: 0
[2026-01-13 22:16:32] 2026-01-14 01:47:34,518 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 22:16:32] 2026-01-14 01:47:53,054 | INFO     | PID=2861539 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 22:16:32] 2026-01-14 01:47:53,054 | INFO     | .. there are 10 such processes running
[2026-01-13 22:16:32] 2026-01-14 01:47:53,059 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 22:16:32] 2026-01-14 01:47:53,059 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 22:16:32] 2026-01-14 01:47:53,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 22:16:32] 2026-01-14 01:47:53,060 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 22:16:32] 2026-01-14 01:47:53,060 | INFO     | [monitor] control thread has ended
[2026-01-13 22:16:32] 2026-01-14 01:47:53,520 [wrapper] ==== pilot stdout END ====
[2026-01-13 22:16:32] 2026-01-14 01:47:53,560 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 22:16:32] 2026-01-14 01:47:53,579 [wrapper] pilotpid: 2861539
[2026-01-13 22:16:32] 2026-01-14 01:47:53,600 [wrapper] Pilot exit status: 0
[2026-01-13 22:16:32] 2026-01-14 01:47:53,649 [wrapper] pandaids: 6966843210
[2026-01-13 22:16:32] 2026-01-14 01:47:53,774 [wrapper] cleanup supervisor_pilot 2939764 2861540
[2026-01-13 22:16:32] 2026-01-14 01:47:53,800 [wrapper] Test setup, not cleaning
[2026-01-13 22:16:32] 2026-01-14 01:47:53,820 [wrapper] apfmon messages muted
[2026-01-13 22:16:32] 2026-01-14 01:47:53,838 [wrapper] ==== wrapper stdout END ====
[2026-01-13 22:16:32] 2026-01-14 01:47:53,884 [wrapper] ==== wrapper stderr END ====
[2026-01-13 22:16:32]  *** Error codes and diagnostics ***
[2026-01-13 22:16:32]     "exeErrorCode": 0,
[2026-01-13 22:16:32]     "exeErrorDiag": "",
[2026-01-13 22:16:32]     "pilotErrorCode": 0,
[2026-01-13 22:16:32]     "pilotErrorDiag": "",
[2026-01-13 22:16:32]  *** Listing of results directory ***
[2026-01-13 22:16:32] total 1531200
[2026-01-13 22:16:32] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 03:42 pilot3.tar.gz
[2026-01-13 22:16:32] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 03:47 queuedata.json
[2026-01-13 22:16:32] -rwx------. 1 boincer umatlas      36322 Jan 12 03:47 runpilot2-wrapper.sh
[2026-01-13 22:16:32] -rw-r--r--. 1 boincer umatlas        100 Jan 12 03:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 22:16:32] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 03:49 run_atlas
[2026-01-13 22:16:32] -rw-r--r--. 1 boincer umatlas        105 Jan 12 03:49 job.xml
[2026-01-13 22:16:32] -rw-r--r--. 2 boincer umatlas  321033061 Jan 12 03:49 EVNT.48118027._000053.pool.root.1
[2026-01-13 22:16:32] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 03:49 start_atlas.sh
[2026-01-13 22:16:32] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 03:49 shared
[2026-01-13 22:16:32] -rw-r--r--. 2 boincer umatlas     592608 Jan 12 03:49 input.tar.gz
[2026-01-13 22:16:32] -rw-r--r--. 1 boincer umatlas          0 Jan 12 03:49 boinc_lockfile
[2026-01-13 22:16:32] -rw-r--r--. 1 boincer umatlas       2895 Jan 12 03:50 pandaJob.out
[2026-01-13 22:16:32] -rw-------. 1 boincer umatlas         57 Jan 12 03:50 setup.sh.local
[2026-01-13 22:16:32] -rw-------. 1 boincer umatlas     987688 Jan 12 03:50 agis_schedconf.cvmfs.json
[2026-01-13 22:16:32] drwx------. 5 boincer umatlas       4096 Jan 12 03:51 pilot3
[2026-01-13 22:16:32] -rw-r--r--. 1 boincer umatlas        534 Jan 13 20:02 boinc_task_state.xml
[2026-01-13 22:16:32] -rw-------. 1 boincer umatlas 1197709302 Jan 13 20:45 HITS.48187943._000257.pool.root.1
[2026-01-13 22:16:32] -rw-------. 1 boincer umatlas       1068 Jan 13 20:46 memory_monitor_summary.json
[2026-01-13 22:16:32] -rw-------. 1 boincer umatlas    1516246 Jan 13 20:46 agis_ddmendpoints.agis.ALL.json
[2026-01-13 22:16:32] -rw-------. 1 boincer umatlas    3754216 Jan 13 20:46 log.48187943._000257.job.log.tgz.1
[2026-01-13 22:16:32] -rw-------. 1 boincer umatlas      27465 Jan 13 20:47 heartbeat.json
[2026-01-13 22:16:32] -rw-------. 1 boincer umatlas         95 Jan 13 20:47 pilot_heartbeat.json
[2026-01-13 22:16:32] -rw-------. 1 boincer umatlas        823 Jan 13 20:47 pilotlog.txt
[2026-01-13 22:16:32] -rw-------. 1 boincer umatlas   18871347 Jan 13 20:47 log.48187943._000257.job.log.1
[2026-01-13 22:16:32] -rw-------. 1 boincer umatlas        353 Jan 13 20:47 output.list
[2026-01-13 22:16:32] -rw-r--r--. 1 boincer umatlas        620 Jan 13 20:47 runtime_log
[2026-01-13 22:16:32] -rw-------. 1 boincer umatlas   22661120 Jan 13 20:47 result.tar.gz
[2026-01-13 22:16:32] -rw-------. 1 boincer umatlas        665 Jan 13 20:47 YfTLDmqlSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtAnKDmRvzzEm.diag
[2026-01-13 22:16:32] -rw-r--r--. 1 boincer umatlas       9356 Jan 13 20:47 runtime_log.err
[2026-01-13 22:16:32] -rw-r--r--. 1 boincer umatlas       6843 Jan 13 22:10 init_data.xml
[2026-01-13 22:16:32] -rw-r--r--. 1 boincer umatlas         30 Jan 13 22:16 wrapper_checkpoint.txt
[2026-01-13 22:16:32] -rw-r--r--. 1 boincer umatlas       8192 Jan 13 22:16 boinc_mmap_file
[2026-01-13 22:16:32] -rw-r--r--. 1 boincer umatlas      21797 Jan 13 22:16 stderr.txt
[2026-01-13 22:16:32] HITS file was successfully produced:
[2026-01-13 22:16:32] -rw-------. 1 boincer umatlas 1197709302 Jan 13 20:45 shared/HITS.pool.root.1
[2026-01-13 22:16:32]  *** Contents of shared directory: ***
[2026-01-13 22:16:32] total 1505888
[2026-01-13 22:16:32] -rw-r--r--. 2 boincer umatlas  321033061 Jan 12 03:49 ATLAS.root_0
[2026-01-13 22:16:32] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 03:49 start_atlas.sh
[2026-01-13 22:16:32] -rw-r--r--. 2 boincer umatlas     592608 Jan 12 03:49 input.tar.gz
[2026-01-13 22:16:32] -rw-------. 1 boincer umatlas 1197709302 Jan 13 20:45 HITS.pool.root.1
[2026-01-13 22:16:32] -rw-------. 1 boincer umatlas   22661120 Jan 13 20:47 result.tar.gz
22:16:34 (2852420): run_atlas exited; CPU time 291557.721032
22:16:34 (2852420): called boinc_finish(0)

</stderr_txt>
]]>

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