Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:50:24 (22590): wrapper (7.7.26015): starting
03:50:24 (22590): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 03:50:24] Arguments: --nthreads 8
[2026-01-12 03:50:24] Threads: 8
[2026-01-12 03:50:24] Checking for CVMFS
[2026-01-12 03:50:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 03:50:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 03:50:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 03:50:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 03:50:24] 2.11.2.0 3869 170856 136296 155045 0 19 12901921 18432000 171 130560 0 118119299 99.987 6100034 33152 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 03:50:24] CVMFS is ok
[2026-01-12 03:50:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 03:50:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 03:50:24] Further information can be found at the LHC@home message board.
[2026-01-12 03:50:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 03:50:24] Checking for apptainer binary...
[2026-01-12 03:50:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 03:50:24] Running /usr/bin/apptainer --version
[2026-01-12 03:50:24] apptainer version 1.3.2-1.el7
[2026-01-12 03:50:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 03:50:25] c-206-12.aglt2.org
[2026-01-12 03:50:25] apptainer works
[2026-01-12 03:50:25] Set ATHENA_PROC_NUMBER=8
[2026-01-12 03:50:25] Set ATHENA_CORE_NUMBER=8
[2026-01-12 03:50:25] Starting ATLAS job with PandaID=6966843205
[2026-01-12 03:50:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 02:54:09]  *** The last 200 lines of the pilot log: ***
[2026-01-13 02:54:09] 2026-01-13 07:53:34,670 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-13 02:54:09] 2026-01-13 07:53:35,569 | INFO     | monitor loop #5927: job 0:6966843205 is in state 'finished'
[2026-01-13 02:54:09] 2026-01-13 07:53:35,569 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 02:54:09] 2026-01-13 07:53:36,236 | INFO     | time since job start (82979s) is within the limit (349056.0s)
[2026-01-13 02:54:09] 2026-01-13 07:53:37,736 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-13 02:54:09] 2026-01-13 07:53:37,741 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2394.7083333333335
[2026-01-13 02:54:09] 2026-01-13 07:53:37,744 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6966843205/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 02:54:09] 2026-01-13 07:53:37,744 | INFO     | extracted standard info from prmon json
[2026-01-13 02:54:09] 2026-01-13 07:53:37,745 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 02:54:09] 2026-01-13 07:53:37,745 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 02:54:09] 2026-01-13 07:53:37,763 | INFO     | fitting pss+swap vs Time
[2026-01-13 02:54:09] 2026-01-13 07:53:37,764 | INFO     | sum of square deviations: 780001038563.6942
[2026-01-13 02:54:09] 2026-01-13 07:53:37,802 | INFO     | sum of deviations: 3530565698622.352
[2026-01-13 02:54:09] 2026-01-13 07:53:37,803 | INFO     | mean x: 1768249319.0411766
[2026-01-13 02:54:09] 2026-01-13 07:53:37,803 | INFO     | mean y: 3433798.904411765
[2026-01-13 02:54:09] 2026-01-13 07:53:37,803 | INFO     | intersect: -8000299637.034236
[2026-01-13 02:54:09] 2026-01-13 07:53:37,804 | INFO     | chi2: 6.007760635860257
[2026-01-13 02:54:09] 2026-01-13 07:53:37,805 | INFO     | sum of square deviations: 771429902332.2231
[2026-01-13 02:54:09] 2026-01-13 07:53:37,846 | INFO     | sum of deviations: 4110537801825.503
[2026-01-13 02:54:09] 2026-01-13 07:53:37,847 | INFO     | mean x: 1768249166.5431733
[2026-01-13 02:54:09] 2026-01-13 07:53:37,847 | INFO     | mean y: 3444119.6922509223
[2026-01-13 02:54:09] 2026-01-13 07:53:37,847 | INFO     | intersect: -9418610975.848923
[2026-01-13 02:54:09] 2026-01-13 07:53:37,848 | INFO     | chi2: 2.5367851472333234
[2026-01-13 02:54:09] 2026-01-13 07:53:37,848 | INFO     | current chi2=2.5367851472333234 (change=57.77486319792302 %)
[2026-01-13 02:54:09] 2026-01-13 07:53:37,849 | INFO     | sum of square deviations: 762921790538.2433
[2026-01-13 02:54:09] 2026-01-13 07:53:37,882 | INFO     | sum of deviations: 4186405043253.3286
[2026-01-13 02:54:09] 2026-01-13 07:53:37,882 | INFO     | mean x: 1768249014.045185
[2026-01-13 02:54:09] 2026-01-13 07:53:37,882 | INFO     | mean y: 3445475.797777778
[2026-01-13 02:54:09] 2026-01-13 07:53:37,882 | INFO     | intersect: -9699523664.595934
[2026-01-13 02:54:09] 2026-01-13 07:53:37,883 | INFO     | chi2: 2.3166167240448154
[2026-01-13 02:54:09] 2026-01-13 07:53:37,884 | INFO     | current chi2=2.3166167240448154 (change=8.679033123030885 %)
[2026-01-13 02:54:09] 2026-01-13 07:53:37,884 | INFO     | right removable region: 1349
[2026-01-13 02:54:09] 2026-01-13 07:53:37,886 | INFO     | sum of square deviations: 771429453372.2244
[2026-01-13 02:54:09] 2026-01-13 07:53:37,920 | INFO     | sum of deviations: 3135906225324.731
[2026-01-13 02:54:09] 2026-01-13 07:53:37,921 | INFO     | mean x: 1768249471.5431733
[2026-01-13 02:54:09] 2026-01-13 07:53:37,921 | INFO     | mean y: 3440812.0900369002
[2026-01-13 02:54:09] 2026-01-13 07:53:37,921 | INFO     | intersect: -7184597577.55107
[2026-01-13 02:54:09] 2026-01-13 07:53:37,922 | INFO     | chi2: 4.020516546388489
[2026-01-13 02:54:09] 2026-01-13 07:53:37,922 | INFO     | current chi2=4.020516546388489 (change=33.077950503053174 %)
[2026-01-13 02:54:09] 2026-01-13 07:53:37,923 | INFO     | sum of square deviations: 762921057684.4216
[2026-01-13 02:54:09] 2026-01-13 07:53:37,955 | INFO     | sum of deviations: 3034766197909.316
[2026-01-13 02:54:09] 2026-01-13 07:53:37,955 | INFO     | mean x: 1768249624.0437038
[2026-01-13 02:54:09] 2026-01-13 07:53:37,955 | INFO     | mean y: 3442624.4014814813
[2026-01-13 02:54:09] 2026-01-13 07:53:37,955 | INFO     | intersect: -7030344337.516929
[2026-01-13 02:54:09] 2026-01-13 07:53:37,957 | INFO     | chi2: 3.975426272349616
[2026-01-13 02:54:09] 2026-01-13 07:53:37,957 | INFO     | current chi2=3.975426272349616 (change=1.1215045011909293 %)
[2026-01-13 02:54:09] 2026-01-13 07:53:37,957 | INFO     | left removable region: 20
[2026-01-13 02:54:09] 2026-01-13 07:53:37,958 | INFO     | sum of square deviations: 727869314081.1198
[2026-01-13 02:54:09] 2026-01-13 07:53:38,001 | INFO     | sum of deviations: 3541438133510.1143
[2026-01-13 02:54:09] 2026-01-13 07:53:38,001 | INFO     | mean x: 1768249593.5485327
[2026-01-13 02:54:09] 2026-01-13 07:53:38,001 | INFO     | mean y: 3456980.083521445
[2026-01-13 02:54:09] 2026-01-13 07:53:38,001 | INFO     | intersect: -8599937089.443949
[2026-01-13 02:54:09] 2026-01-13 07:53:38,002 | INFO     | chi2: 0.24838210266570096
[2026-01-13 02:54:09] 2026-01-13 07:53:38,002 | INFO     | current memory leak: 4.87 B/s (using 1329 data points, chi2=0.25)
[2026-01-13 02:54:09] 2026-01-13 07:53:38,003 | INFO     | could have reported an average CPU frequency of 2587 MHz (49 samples)
[2026-01-13 02:54:09] 2026-01-13 07:53:38,004 | INFO     | ..............................
[2026-01-13 02:54:09] 2026-01-13 07:53:38,004 | INFO     | . Timing measurements:
[2026-01-13 02:54:09] 2026-01-13 07:53:38,004 | INFO     | . get job = 0 s
[2026-01-13 02:54:09] 2026-01-13 07:53:38,004 | INFO     | . initial setup = 2 s
[2026-01-13 02:54:09] 2026-01-13 07:53:38,004 | INFO     | . payload setup = 11 s
[2026-01-13 02:54:09] 2026-01-13 07:53:38,004 | INFO     | . stage-in = 0 s
[2026-01-13 02:54:09] 2026-01-13 07:53:38,004 | INFO     | . payload execution = 82939 s
[2026-01-13 02:54:09] 2026-01-13 07:53:38,004 | INFO     | . stage-out = 4 s
[2026-01-13 02:54:09] 2026-01-13 07:53:38,004 | INFO     | . log creation = 1 s
[2026-01-13 02:54:09] 2026-01-13 07:53:38,004 | INFO     | ..............................
[2026-01-13 02:54:09] 2026-01-13 07:53:38,091 | INFO     | 
[2026-01-13 02:54:09] 2026-01-13 07:53:38,092 | INFO     | job summary report
[2026-01-13 02:54:09] 2026-01-13 07:53:38,092 | INFO     | --------------------------------------------------
[2026-01-13 02:54:09] 2026-01-13 07:53:38,092 | INFO     | PanDA job id: 6966843205
[2026-01-13 02:54:09] 2026-01-13 07:53:38,092 | INFO     | task id: 48187943
[2026-01-13 02:54:09] 2026-01-13 07:53:38,092 | INFO     | errors: (none)
[2026-01-13 02:54:09] 2026-01-13 07:53:38,092 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 02:54:09] 2026-01-13 07:53:38,093 | INFO     | pilot state: finished 
[2026-01-13 02:54:09] 2026-01-13 07:53:38,093 | INFO     | transexitcode: 0
[2026-01-13 02:54:09] 2026-01-13 07:53:38,093 | INFO     | exeerrorcode: 0
[2026-01-13 02:54:09] 2026-01-13 07:53:38,093 | INFO     | exeerrordiag: 
[2026-01-13 02:54:09] 2026-01-13 07:53:38,093 | INFO     | exitcode: 0
[2026-01-13 02:54:09] 2026-01-13 07:53:38,093 | INFO     | exitmsg: OK
[2026-01-13 02:54:09] 2026-01-13 07:53:38,094 | INFO     | cpuconsumptiontime: 652348 s
[2026-01-13 02:54:09] 2026-01-13 07:53:38,094 | INFO     | nevents: 2050
[2026-01-13 02:54:09] 2026-01-13 07:53:38,094 | INFO     | neventsw: 0
[2026-01-13 02:54:09] 2026-01-13 07:53:38,094 | INFO     | pid: 26991
[2026-01-13 02:54:09] 2026-01-13 07:53:38,094 | INFO     | pgrp: 26991
[2026-01-13 02:54:09] 2026-01-13 07:53:38,094 | INFO     | corecount: 8
[2026-01-13 02:54:09] 2026-01-13 07:53:38,094 | INFO     | event service: False
[2026-01-13 02:54:09] 2026-01-13 07:53:38,095 | INFO     | sizes: {0: 2284448, 1: 2284647, 5: 2284909, 11: 2284965, 82955: 2367428, 82960: 2376426, 82962: 2376610, 82965: 2376856}
[2026-01-13 02:54:09] 2026-01-13 07:53:38,095 | INFO     | --------------------------------------------------
[2026-01-13 02:54:09] 2026-01-13 07:53:38,095 | INFO     | 
[2026-01-13 02:54:09] 2026-01-13 07:53:38,095 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-13 02:54:09] 2026-01-13 07:53:38,113 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 02:54:09] 2026-01-13 07:53:38,113 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 02:54:09] 2026-01-13 07:53:38,113 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 02:54:09] 2026-01-13 07:53:38,114 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 02:54:09] 2026-01-13 07:53:38,114 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 02:54:09] 2026-01-13 07:53:38,114 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 02:54:09] 2026-01-13 07:53:38,114 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 02:54:09] 2026-01-13 07:53:38,114 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 02:54:09] 2026-01-13 07:53:38,114 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 02:54:09] 2026-01-13 07:53:38,115 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 02:54:09] 2026-01-13 07:53:38,115 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 02:54:09] 2026-01-13 07:53:38,115 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 02:54:09] 2026-01-13 07:53:38,115 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 02:54:09] 2026-01-13 07:53:38,115 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 02:54:09] 2026-01-13 07:53:38,115 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 02:54:09] 2026-01-13 07:53:38,116 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 02:54:09] 2026-01-13 07:53:38,116 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 02:54:09] 2026-01-13 07:53:38,116 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 02:54:09] 2026-01-13 07:53:38,116 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 02:54:09] 2026-01-13 07:53:38,116 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 02:54:09] 2026-01-13 07:53:38,117 | INFO     | job 6966843205 has completed (purged errors)
[2026-01-13 02:54:09] 2026-01-13 07:53:38,117 | INFO     | overall cleanup function is called
[2026-01-13 02:54:09] 2026-01-13 07:53:39,134 | INFO     | --- collectZombieJob: --- 10, [26991]
[2026-01-13 02:54:09] 2026-01-13 07:53:39,134 | INFO     | zombie collector waiting for pid 26991
[2026-01-13 02:54:09] 2026-01-13 07:53:39,135 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 02:54:09] 2026-01-13 07:53:39,135 | INFO     | collected zombie processes
[2026-01-13 02:54:09] 2026-01-13 07:53:39,135 | INFO     | will attempt to kill all subprocesses of pid=26991
[2026-01-13 02:54:09] 2026-01-13 07:53:39,287 | INFO     | process IDs to be killed: [26991] (in reverse order)
[2026-01-13 02:54:09] 2026-01-13 07:53:39,342 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 02:54:09] 2026-01-13 07:53:39,343 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 02:54:09] 2026-01-13 07:53:39,345 | INFO     | did not find any defunct processes belonging to 26991
[2026-01-13 02:54:09] 2026-01-13 07:53:39,348 | INFO     | did not find any defunct processes belonging to 26991
[2026-01-13 02:54:09] 2026-01-13 07:53:39,348 | INFO     | ready for new job
[2026-01-13 02:54:09] 2026-01-13 07:53:39,348 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 02:54:09] 2026-01-13 07:53:39,352 | INFO     | ***************************************
[2026-01-13 02:54:09] 2026-01-13 07:53:39,352 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 02:54:09] 2026-01-13 07:53:39,353 | INFO     | ***************************************
[2026-01-13 02:54:09] 2026-01-13 07:53:39,353 | INFO     | 
[2026-01-13 02:54:09] 2026-01-13 07:53:39,354 | INFO     | architecture information:
[2026-01-13 02:54:09] 2026-01-13 07:53:39,354 | INFO     | executing command: cat /etc/os-release
[2026-01-13 02:54:09] 2026-01-13 07:53:39,363 | INFO     | cat /etc/os-release:
[2026-01-13 02:54:09] NAME="CentOS Linux"
[2026-01-13 02:54:09] VERSION="7 (Core)"
[2026-01-13 02:54:09] ID="centos"
[2026-01-13 02:54:09] ID_LIKE="rhel fedora"
[2026-01-13 02:54:09] VERSION_ID="7"
[2026-01-13 02:54:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 02:54:09] ANSI_COLOR="0;31"
[2026-01-13 02:54:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 02:54:09] HOME_URL="https://www.centos.org/"
[2026-01-13 02:54:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 02:54:09] 
[2026-01-13 02:54:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 02:54:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 02:54:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 02:54:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 02:54:09] 
[2026-01-13 02:54:09] 2026-01-13 07:53:39,363 | INFO     | ***************************************
[2026-01-13 02:54:09] 2026-01-13 07:53:39,866 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-13 02:54:09] 2026-01-13 07:53:39,892 | INFO     | sufficient remaining disk space (23692574720 B)
[2026-01-13 02:54:09] 2026-01-13 07:53:39,893 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 02:54:09] 2026-01-13 07:53:39,893 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 02:54:09] 2026-01-13 07:53:39,893 | INFO     | update_server=False
[2026-01-13 02:54:09] 2026-01-13 07:53:39,893 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 02:54:09] 2026-01-13 07:53:39,894 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 02:54:09] 2026-01-13 07:53:39,894 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 02:54:09] 2026-01-13 07:53:39,894 | INFO     | aborting loop
[2026-01-13 02:54:09] 2026-01-13 07:53:39,926 | INFO     | all payload control threads have been joined
[2026-01-13 02:54:09] 2026-01-13 07:53:40,020 | INFO     | all data control threads have been joined
[2026-01-13 02:54:09] 2026-01-13 07:53:40,647 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 02:54:09] 2026-01-13 07:53:40,835 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 02:54:09] 2026-01-13 07:53:40,899 | INFO     | [job] retrieve thread has finished
[2026-01-13 02:54:09] 2026-01-13 07:53:40,899 | INFO     | [job] queue monitor thread has finished
[2026-01-13 02:54:09] 2026-01-13 07:53:40,900 | INFO     | [job] job monitor thread has finished
[2026-01-13 02:54:09] 2026-01-13 07:53:40,932 | INFO     | [payload] control thread has finished
[2026-01-13 02:54:09] 2026-01-13 07:53:40,982 | INFO     | [data] copytool_in thread has finished
[2026-01-13 02:54:09] 2026-01-13 07:53:41,026 | INFO     | [data] control thread has finished
[2026-01-13 02:54:09] 2026-01-13 07:53:41,053 | INFO     | all job control threads have been joined
[2026-01-13 02:54:09] 2026-01-13 07:53:41,615 | INFO     | [payload] validate_post thread has finished
[2026-01-13 02:54:09] 2026-01-13 07:53:41,903 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 02:54:09] 2026-01-13 07:53:41,927 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 02:54:09] 2026-01-13 07:53:41,988 | INFO     | [job] validate thread has finished
[2026-01-13 02:54:09] 2026-01-13 07:53:42,059 | INFO     | [job] control thread has finished
[2026-01-13 02:54:09] 2026-01-13 07:53:42,092 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 02:54:09] 2026-01-13 07:53:42,332 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 02:54:09] 2026-01-13 07:53:42,417 | INFO     | [payload] failed_post thread has finished
[2026-01-13 02:54:09] 2026-01-13 07:53:42,842 | INFO     | [data] copytool_out thread has finished
[2026-01-13 02:54:09] 2026-01-13 07:53:44,653 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 02:54:09] 2026-01-13 07:53:55,799 | INFO     | [monitor] cgroup control has ended
[2026-01-13 02:54:09] 2026-01-13 07:53:55,837 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140114126956352)>', '<ExcThread(monitor, started 140113669498624)>']
[2026-01-13 02:54:09] 2026-01-13 07:54:00,862 | INFO     | all workflow threads have been joined
[2026-01-13 02:54:09] 2026-01-13 07:54:00,872 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 02:54:09] 2026-01-13 07:54:00,873 | INFO     | traces error code: 0
[2026-01-13 02:54:09] 2026-01-13 07:54:00,873 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 02:54:09] 2026-01-13 07:54:09,461 | INFO     | PID=31785 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-13 02:54:09] 2026-01-13 07:54:09,461 | INFO     | .. there are 3 such processes running
[2026-01-13 02:54:09] 2026-01-13 07:54:09,462 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 02:54:09] 2026-01-13 07:54:09,462 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 02:54:09] 2026-01-13 07:54:09,462 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 02:54:09] 2026-01-13 07:54:09,462 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 02:54:09] 2026-01-13 07:54:09,462 | INFO     | [monitor] control thread has ended
[2026-01-13 02:54:09] 2026-01-13 07:54:09,575 [wrapper] ==== pilot stdout END ====
[2026-01-13 02:54:09] 2026-01-13 07:54:09,577 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 02:54:09] 2026-01-13 07:54:09,580 [wrapper] pilotpid: 31785
[2026-01-13 02:54:09] 2026-01-13 07:54:09,582 [wrapper] Pilot exit status: 0
[2026-01-13 02:54:09] 2026-01-13 07:54:09,590 [wrapper] pandaids: 6966843205
[2026-01-13 02:54:09] 2026-01-13 07:54:09,618 [wrapper] cleanup supervisor_pilot  2910 31786
[2026-01-13 02:54:09] 2026-01-13 07:54:09,621 [wrapper] Test setup, not cleaning
[2026-01-13 02:54:09] 2026-01-13 07:54:09,623 [wrapper] apfmon messages muted
[2026-01-13 02:54:09] 2026-01-13 07:54:09,625 [wrapper] ==== wrapper stdout END ====
[2026-01-13 02:54:09] 2026-01-13 07:54:09,627 [wrapper] ==== wrapper stderr END ====
[2026-01-13 02:54:09]  *** Error codes and diagnostics ***
[2026-01-13 02:54:09]     "exeErrorCode": 0,
[2026-01-13 02:54:09]     "exeErrorDiag": "",
[2026-01-13 02:54:09]     "pilotErrorCode": 0,
[2026-01-13 02:54:09]     "pilotErrorDiag": "",
[2026-01-13 02:54:09]  *** Listing of results directory ***
[2026-01-13 02:54:09] total 1502368
[2026-01-13 02:54:09] -rw-r--r-- 1 boincer umatlas     579449 Jan 12 03:42 pilot3.tar.gz
[2026-01-13 02:54:09] -rw-r--r-- 1 boincer umatlas       5112 Jan 12 03:47 queuedata.json
[2026-01-13 02:54:09] -rwx------ 1 boincer umatlas      36322 Jan 12 03:47 runpilot2-wrapper.sh
[2026-01-13 02:54:09] -rw-r--r-- 1 boincer umatlas        100 Jan 12 03:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 02:54:09] -rwxr-xr-x 1 boincer umatlas       7986 Jan 12 03:50 run_atlas
[2026-01-13 02:54:09] -rw-r--r-- 1 boincer umatlas        105 Jan 12 03:50 job.xml
[2026-01-13 02:54:09] -rw-r--r-- 2 boincer umatlas     592610 Jan 12 03:50 input.tar.gz
[2026-01-13 02:54:09] -rw-r--r-- 2 boincer umatlas  320352858 Jan 12 03:50 EVNT.48118027._000052.pool.root.1
[2026-01-13 02:54:09] -rw-r--r-- 2 boincer umatlas      15847 Jan 12 03:50 start_atlas.sh
[2026-01-13 02:54:09] drwxrwx--x 2 boincer umatlas       4096 Jan 12 03:50 shared
[2026-01-13 02:54:09] -rw-r--r-- 1 boincer umatlas          0 Jan 12 03:50 boinc_lockfile
[2026-01-13 02:54:09] -rw-r--r-- 1 boincer umatlas       2895 Jan 12 03:50 pandaJob.out
[2026-01-13 02:54:09] -rw------- 1 boincer umatlas         57 Jan 12 03:50 setup.sh.local
[2026-01-13 02:54:09] -rw------- 1 boincer umatlas     987688 Jan 12 03:50 agis_schedconf.cvmfs.json
[2026-01-13 02:54:09] drwx------ 5 boincer umatlas       4096 Jan 12 03:50 pilot3
[2026-01-13 02:54:09] -rw-r--r-- 1 boincer umatlas        533 Jan 13 02:45 boinc_task_state.xml
[2026-01-13 02:54:09] -rw-r--r-- 1 boincer umatlas       5953 Jan 13 02:48 init_data.xml
[2026-01-13 02:54:09] -rw------- 1 boincer umatlas 1185561455 Jan 13 02:52 HITS.48187943._000252.pool.root.1
[2026-01-13 02:54:09] -rw------- 1 boincer umatlas         95 Jan 13 02:53 pilot_heartbeat.json
[2026-01-13 02:54:09] -rw------- 1 boincer umatlas       1061 Jan 13 02:53 memory_monitor_summary.json
[2026-01-13 02:54:09] -rw------- 1 boincer umatlas    1516240 Jan 13 02:53 agis_ddmendpoints.agis.ALL.json
[2026-01-13 02:54:09] -rw------- 1 boincer umatlas    2815440 Jan 13 02:53 log.48187943._000252.job.log.tgz.1
[2026-01-13 02:54:09] -rw------- 1 boincer umatlas      27830 Jan 13 02:53 heartbeat.json
[2026-01-13 02:54:09] -rw-r--r-- 1 boincer umatlas       8192 Jan 13 02:53 boinc_mmap_file
[2026-01-13 02:54:09] -rw-r--r-- 1 boincer umatlas         29 Jan 13 02:53 wrapper_checkpoint.txt
[2026-01-13 02:54:09] -rw------- 1 boincer umatlas        820 Jan 13 02:54 pilotlog.txt
[2026-01-13 02:54:09] -rw------- 1 boincer umatlas   11465523 Jan 13 02:54 log.48187943._000252.job.log.1
[2026-01-13 02:54:09] -rw------- 1 boincer umatlas        353 Jan 13 02:54 output.list
[2026-01-13 02:54:09] -rw-r--r-- 1 boincer umatlas        620 Jan 13 02:54 runtime_log
[2026-01-13 02:54:09] -rw------- 1 boincer umatlas   14315520 Jan 13 02:54 result.tar.gz
[2026-01-13 02:54:09] -rw-r--r-- 1 boincer umatlas       9343 Jan 13 02:54 runtime_log.err
[2026-01-13 02:54:09] -rw------- 1 boincer umatlas        668 Jan 13 02:54 jxMLDmqlSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpAnKDm8yIOLn.diag
[2026-01-13 02:54:09] -rw-r--r-- 1 boincer umatlas      21306 Jan 13 02:54 stderr.txt
[2026-01-13 02:54:09] HITS file was successfully produced:
[2026-01-13 02:54:09] -rw------- 1 boincer umatlas 1185561455 Jan 13 02:52 shared/HITS.pool.root.1
[2026-01-13 02:54:09]  *** Contents of shared directory: ***
[2026-01-13 02:54:09] total 1485204
[2026-01-13 02:54:09] -rw-r--r-- 2 boincer umatlas     592610 Jan 12 03:50 input.tar.gz
[2026-01-13 02:54:09] -rw-r--r-- 2 boincer umatlas  320352858 Jan 12 03:50 ATLAS.root_0
[2026-01-13 02:54:09] -rw-r--r-- 2 boincer umatlas      15847 Jan 12 03:50 start_atlas.sh
[2026-01-13 02:54:09] -rw------- 1 boincer umatlas 1185561455 Jan 13 02:52 HITS.pool.root.1
[2026-01-13 02:54:09] -rw------- 1 boincer umatlas   14315520 Jan 13 02:54 result.tar.gz
02:54:11 (22590): run_atlas exited; CPU time 651509.167054
02:54:11 (22590): called boinc_finish(0)

</stderr_txt>
]]>

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