Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:49:58 (2852510): wrapper (7.7.26015): starting
03:49:58 (2852510): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 03:49:58] Arguments: --nthreads 8
[2026-01-12 03:49:58] Threads: 8
[2026-01-12 03:49:58] Checking for CVMFS
[2026-01-12 03:49:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 03:50:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 03:50:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 03:50:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 03:50:01] 2.13.3.0 6317 97512 368900 155045 2 378 35788467 40960001 11844 16776704 0 268929446 99.600 292966924 29767 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 03:50:01] CVMFS is ok
[2026-01-12 03:50:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 03:50:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 03:50:01] Further information can be found at the LHC@home message board.
[2026-01-12 03:50:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 03:50:01] Checking for apptainer binary...
[2026-01-12 03:50:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 03:50:01] Running /usr/bin/apptainer --version
[2026-01-12 03:50:01] apptainer version 1.4.5-2.el9
[2026-01-12 03:50:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 03:50:01] c6-8-12-2.aglt2.org
[2026-01-12 03:50:01] apptainer works
[2026-01-12 03:50:01] Set ATHENA_PROC_NUMBER=8
[2026-01-12 03:50:01] Set ATHENA_CORE_NUMBER=8
[2026-01-12 03:50:02] Starting ATLAS job with PandaID=6966858645
[2026-01-12 03:50:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 13:45:31]  *** The last 200 lines of the pilot log: ***
[2026-01-13 13:45:31] 2026-01-13 18:44:36,258 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-13 13:45:31] 2026-01-13 18:44:37,586 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-13 13:45:31] 2026-01-13 18:44:37,593 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2971.0741250000005
[2026-01-13 13:45:31] 2026-01-13 18:44:37,602 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6966858645/memory_monitor_summary.json (trf name=prmon)
[2026-01-13 13:45:31] 2026-01-13 18:44:37,603 | INFO     | extracted standard info from prmon json
[2026-01-13 13:45:31] 2026-01-13 18:44:37,603 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 13:45:31] 2026-01-13 18:44:37,603 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 13:45:31] 2026-01-13 18:44:37,630 | INFO     | fitting pss+swap vs Time
[2026-01-13 13:45:31] 2026-01-13 18:44:37,632 | INFO     | sum of square deviations: 2476950669471.1562
[2026-01-13 13:45:31] 2026-01-13 18:44:37,699 | INFO     | sum of deviations: 12507464565976.568
[2026-01-13 13:45:31] 2026-01-13 18:44:37,700 | INFO     | mean x: 1768268896.1530766
[2026-01-13 13:45:31] 2026-01-13 18:44:37,700 | INFO     | mean y: 3489125.9654827416
[2026-01-13 13:45:31] 2026-01-13 18:44:37,700 | INFO     | intersect: -8925457596.447493
[2026-01-13 13:45:31] 2026-01-13 18:44:37,702 | INFO     | chi2: 9.43094530854601
[2026-01-13 13:45:31] 2026-01-13 18:44:37,705 | INFO     | sum of square deviations: 2458413253877.202
[2026-01-13 13:45:31] 2026-01-13 18:44:37,773 | INFO     | sum of deviations: 13357131327760.63
[2026-01-13 13:45:31] 2026-01-13 18:44:37,773 | INFO     | mean x: 1768268743.6634905
[2026-01-13 13:45:31] 2026-01-13 18:44:37,773 | INFO     | mean y: 3496115.1023069206
[2026-01-13 13:45:31] 2026-01-13 18:44:37,774 | INFO     | intersect: -9603919478.934885
[2026-01-13 13:45:31] 2026-01-13 18:44:37,776 | INFO     | chi2: 6.045000936680969
[2026-01-13 13:45:31] 2026-01-13 18:44:37,776 | INFO     | current chi2=6.045000936680969 (change=35.90249186151902 %)
[2026-01-13 13:45:31] 2026-01-13 18:44:37,778 | INFO     | sum of square deviations: 2439967976680.5376
[2026-01-13 13:45:31] 2026-01-13 18:44:37,844 | INFO     | sum of deviations: 13704772914166.266
[2026-01-13 13:45:31] 2026-01-13 18:44:37,844 | INFO     | mean x: 1768268591.171443
[2026-01-13 13:45:31] 2026-01-13 18:44:37,845 | INFO     | mean y: 3498985.4303670186
[2026-01-13 13:45:31] 2026-01-13 18:44:37,845 | INFO     | intersect: -9928483616.335651
[2026-01-13 13:45:31] 2026-01-13 18:44:37,847 | INFO     | chi2: 4.872839720020836
[2026-01-13 13:45:31] 2026-01-13 18:44:37,848 | INFO     | current chi2=4.872839720020836 (change=19.390587841723526 %)
[2026-01-13 13:45:31] 2026-01-13 18:44:37,848 | INFO     | right removable region: 1988
[2026-01-13 13:45:31] 2026-01-13 18:44:37,850 | INFO     | sum of square deviations: 2458408189657.205
[2026-01-13 13:45:31] 2026-01-13 18:44:37,917 | INFO     | sum of deviations: 11575015982558.21
[2026-01-13 13:45:31] 2026-01-13 18:44:37,917 | INFO     | mean x: 1768269048.6634905
[2026-01-13 13:45:31] 2026-01-13 18:44:37,918 | INFO     | mean y: 3496794.240220662
[2026-01-13 13:45:31] 2026-01-13 18:44:37,918 | INFO     | intersect: -8322111046.578468
[2026-01-13 13:45:31] 2026-01-13 18:44:37,920 | INFO     | chi2: 5.649658217458544
[2026-01-13 13:45:31] 2026-01-13 18:44:37,920 | INFO     | current chi2=5.649658217458544 (change=40.09446526702884 %)
[2026-01-13 13:45:31] 2026-01-13 18:44:37,922 | INFO     | sum of square deviations: 2439958698684.497
[2026-01-13 13:45:31] 2026-01-13 18:44:38,026 | INFO     | sum of deviations: 11156981334060.662
[2026-01-13 13:45:31] 2026-01-13 18:44:38,027 | INFO     | mean x: 1768269201.1729512
[2026-01-13 13:45:31] 2026-01-13 18:44:38,027 | INFO     | mean y: 3500247.841126194
[2026-01-13 13:45:31] 2026-01-13 18:44:38,027 | INFO     | intersect: -8082106480.550471
[2026-01-13 13:45:31] 2026-01-13 18:44:38,029 | INFO     | chi2: 4.907602111697387
[2026-01-13 13:45:31] 2026-01-13 18:44:38,029 | INFO     | current chi2=4.907602111697387 (change=13.134530925571022 %)
[2026-01-13 13:45:31] 2026-01-13 18:44:38,029 | INFO     | left removable region: 20
[2026-01-13 13:45:31] 2026-01-13 18:44:38,035 | INFO     | sum of square deviations: 2363489219971.0684
[2026-01-13 13:45:31] 2026-01-13 18:44:38,113 | INFO     | sum of deviations: 12075309601249.861
[2026-01-13 13:45:31] 2026-01-13 18:44:38,113 | INFO     | mean x: 1768269170.7052846
[2026-01-13 13:45:31] 2026-01-13 18:44:38,113 | INFO     | mean y: 3512314.5152439023
[2026-01-13 13:45:31] 2026-01-13 18:44:38,113 | INFO     | intersect: -9030756813.597399
[2026-01-13 13:45:31] 2026-01-13 18:44:38,116 | INFO     | chi2: 0.29244947468391475
[2026-01-13 13:45:31] 2026-01-13 18:44:38,116 | INFO     | current memory leak: 5.11 B/s (using 1968 data points, chi2=0.29)
[2026-01-13 13:45:31] 2026-01-13 18:44:38,118 | INFO     | could have reported an average CPU frequency of 2998 MHz (70 samples)
[2026-01-13 13:45:31] 2026-01-13 18:44:38,118 | INFO     | ..............................
[2026-01-13 13:45:31] 2026-01-13 18:44:38,118 | INFO     | . Timing measurements:
[2026-01-13 13:45:31] 2026-01-13 18:44:38,118 | INFO     | . get job = 0 s
[2026-01-13 13:45:31] 2026-01-13 18:44:38,118 | INFO     | . initial setup = 3 s
[2026-01-13 13:45:31] 2026-01-13 18:44:38,118 | INFO     | . payload setup = 42 s
[2026-01-13 13:45:31] 2026-01-13 18:44:38,118 | INFO     | . stage-in = 0 s
[2026-01-13 13:45:31] 2026-01-13 18:44:38,118 | INFO     | . payload execution = 121926 s
[2026-01-13 13:45:31] 2026-01-13 18:44:38,118 | INFO     | . stage-out = 5 s
[2026-01-13 13:45:31] 2026-01-13 18:44:38,118 | INFO     | . log creation = 1 s
[2026-01-13 13:45:31] 2026-01-13 18:44:38,119 | INFO     | ..............................
[2026-01-13 13:45:31] 2026-01-13 18:44:38,182 | INFO     | time since job start (122033s) is within the limit (349056.0s)
[2026-01-13 13:45:31] 2026-01-13 18:44:38,674 | INFO     | 
[2026-01-13 13:45:31] 2026-01-13 18:44:38,674 | INFO     | job summary report
[2026-01-13 13:45:31] 2026-01-13 18:44:38,674 | INFO     | --------------------------------------------------
[2026-01-13 13:45:31] 2026-01-13 18:44:38,674 | INFO     | PanDA job id: 6966858645
[2026-01-13 13:45:31] 2026-01-13 18:44:38,674 | INFO     | task id: 48187943
[2026-01-13 13:45:31] 2026-01-13 18:44:38,674 | INFO     | errors: (none)
[2026-01-13 13:45:31] 2026-01-13 18:44:38,674 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 13:45:31] 2026-01-13 18:44:38,674 | INFO     | pilot state: finished 
[2026-01-13 13:45:31] 2026-01-13 18:44:38,674 | INFO     | transexitcode: 0
[2026-01-13 13:45:31] 2026-01-13 18:44:38,675 | INFO     | exeerrorcode: 0
[2026-01-13 13:45:31] 2026-01-13 18:44:38,675 | INFO     | exeerrordiag: 
[2026-01-13 13:45:31] 2026-01-13 18:44:38,675 | INFO     | exitcode: 0
[2026-01-13 13:45:31] 2026-01-13 18:44:38,675 | INFO     | exitmsg: OK
[2026-01-13 13:45:31] 2026-01-13 18:44:38,675 | INFO     | cpuconsumptiontime: 280246 s
[2026-01-13 13:45:31] 2026-01-13 18:44:38,675 | INFO     | nevents: 2050
[2026-01-13 13:45:31] 2026-01-13 18:44:38,675 | INFO     | neventsw: 0
[2026-01-13 13:45:31] 2026-01-13 18:44:38,675 | INFO     | pid: 2876301
[2026-01-13 13:45:31] 2026-01-13 18:44:38,675 | INFO     | pgrp: 2876301
[2026-01-13 13:45:31] 2026-01-13 18:44:38,675 | INFO     | corecount: 8
[2026-01-13 13:45:31] 2026-01-13 18:44:38,675 | INFO     | event service: False
[2026-01-13 13:45:31] 2026-01-13 18:44:38,675 | INFO     | sizes: {0: 2286812, 1: 2287011, 12: 2287011, 19: 2287333, 23: 2287361, 121973: 2388471, 121980: 2396357, 121982: 2396413, 121992: 2396659}
[2026-01-13 13:45:31] 2026-01-13 18:44:38,675 | INFO     | --------------------------------------------------
[2026-01-13 13:45:31] 2026-01-13 18:44:38,675 | INFO     | 
[2026-01-13 13:45:31] 2026-01-13 18:44:38,676 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-13 13:45:31] 2026-01-13 18:44:38,879 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 13:45:31] 2026-01-13 18:44:38,879 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 13:45:31] 2026-01-13 18:44:38,879 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 13:45:31] 2026-01-13 18:44:38,879 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 13:45:31] 2026-01-13 18:44:38,879 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 13:45:31] 2026-01-13 18:44:38,880 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 13:45:31] 2026-01-13 18:44:38,880 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 13:45:31] 2026-01-13 18:44:38,880 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 13:45:31] 2026-01-13 18:44:38,880 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 13:45:31] 2026-01-13 18:44:38,880 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 13:45:31] 2026-01-13 18:44:38,880 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 13:45:31] 2026-01-13 18:44:38,880 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 13:45:31] 2026-01-13 18:44:38,880 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 13:45:31] 2026-01-13 18:44:38,880 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 13:45:31] 2026-01-13 18:44:38,880 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 13:45:31] 2026-01-13 18:44:38,880 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 13:45:31] 2026-01-13 18:44:38,880 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 13:45:31] 2026-01-13 18:44:38,880 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 13:45:31] 2026-01-13 18:44:38,880 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 13:45:31] 2026-01-13 18:44:38,880 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 13:45:31] 2026-01-13 18:44:38,881 | INFO     | job 6966858645 has completed (purged errors)
[2026-01-13 13:45:31] 2026-01-13 18:44:38,881 | INFO     | overall cleanup function is called
[2026-01-13 13:45:31] 2026-01-13 18:44:39,914 | INFO     | --- collectZombieJob: --- 10, [2876301]
[2026-01-13 13:45:31] 2026-01-13 18:44:39,914 | INFO     | zombie collector waiting for pid 2876301
[2026-01-13 13:45:31] 2026-01-13 18:44:39,914 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 13:45:31] 2026-01-13 18:44:39,914 | INFO     | collected zombie processes
[2026-01-13 13:45:31] 2026-01-13 18:44:39,914 | INFO     | will attempt to kill all subprocesses of pid=2876301
[2026-01-13 13:45:31] 2026-01-13 18:44:40,162 | INFO     | process IDs to be killed: [2876301] (in reverse order)
[2026-01-13 13:45:31] 2026-01-13 18:44:40,259 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 13:45:31] 2026-01-13 18:44:40,260 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 13:45:31] 2026-01-13 18:44:40,270 | INFO     | did not find any defunct processes belonging to 2876301
[2026-01-13 13:45:31] 2026-01-13 18:44:40,279 | INFO     | did not find any defunct processes belonging to 2876301
[2026-01-13 13:45:31] 2026-01-13 18:44:40,279 | INFO     | ready for new job
[2026-01-13 13:45:31] 2026-01-13 18:44:40,280 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 13:45:31] 2026-01-13 18:44:40,291 | INFO     | ***************************************
[2026-01-13 13:45:31] 2026-01-13 18:44:40,292 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 13:45:31] 2026-01-13 18:44:40,292 | INFO     | ***************************************
[2026-01-13 13:45:31] 2026-01-13 18:44:40,292 | INFO     | 
[2026-01-13 13:45:31] 2026-01-13 18:44:40,299 | INFO     | architecture information:
[2026-01-13 13:45:31] 2026-01-13 18:44:40,307 | INFO     | executing command: cat /etc/os-release
[2026-01-13 13:45:31] 2026-01-13 18:44:40,328 | INFO     | cat /etc/os-release:
[2026-01-13 13:45:31] NAME="CentOS Linux"
[2026-01-13 13:45:31] VERSION="7 (Core)"
[2026-01-13 13:45:31] ID="centos"
[2026-01-13 13:45:31] ID_LIKE="rhel fedora"
[2026-01-13 13:45:31] VERSION_ID="7"
[2026-01-13 13:45:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 13:45:31] ANSI_COLOR="0;31"
[2026-01-13 13:45:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 13:45:31] HOME_URL="https://www.centos.org/"
[2026-01-13 13:45:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 13:45:31] 
[2026-01-13 13:45:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 13:45:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 13:45:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 13:45:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 13:45:31] 
[2026-01-13 13:45:31] 2026-01-13 18:44:40,328 | INFO     | ***************************************
[2026-01-13 13:45:31] 2026-01-13 18:44:40,832 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-13 13:45:31] 2026-01-13 18:44:40,863 | INFO     | sufficient remaining disk space (73636249600 B)
[2026-01-13 13:45:31] 2026-01-13 18:44:40,863 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 13:45:31] 2026-01-13 18:44:40,863 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 13:45:31] 2026-01-13 18:44:40,863 | INFO     | update_server=False
[2026-01-13 13:45:31] 2026-01-13 18:44:40,863 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 13:45:31] 2026-01-13 18:44:41,268 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-13 13:45:31] 2026-01-13 18:44:41,268 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-13 13:45:31] 2026-01-13 18:44:41,268 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 13:45:31] 2026-01-13 18:44:41,268 | INFO     | will abort loop
[2026-01-13 13:45:31] 2026-01-13 18:44:41,362 | INFO     | all data control threads have been joined
[2026-01-13 13:45:31] 2026-01-13 18:44:41,395 | INFO     | all job control threads have been joined
[2026-01-13 13:45:31] 2026-01-13 18:44:41,440 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 13:45:31] 2026-01-13 18:44:41,526 | INFO     | all payload control threads have been joined
[2026-01-13 13:45:31] 2026-01-13 18:44:41,870 | INFO     | [job] retrieve thread has finished
[2026-01-13 13:45:31] 2026-01-13 18:44:41,976 | INFO     | [data] copytool_in thread has finished
[2026-01-13 13:45:31] 2026-01-13 18:44:42,011 | INFO     | [job] validate thread has finished
[2026-01-13 13:45:31] 2026-01-13 18:44:42,202 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 13:45:31] 2026-01-13 18:44:42,274 | INFO     | [job] job monitor thread has finished
[2026-01-13 13:45:31] 2026-01-13 18:44:42,339 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 13:45:31] 2026-01-13 18:44:42,368 | INFO     | [data] control thread has finished
[2026-01-13 13:45:31] 2026-01-13 18:44:42,401 | INFO     | [job] control thread has finished
[2026-01-13 13:45:31] 2026-01-13 18:44:42,424 | INFO     | [payload] validate_post thread has finished
[2026-01-13 13:45:31] 2026-01-13 18:44:42,533 | INFO     | [payload] control thread has finished
[2026-01-13 13:45:31] 2026-01-13 18:44:42,731 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 13:45:31] 2026-01-13 18:44:42,770 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 13:45:31] 2026-01-13 18:44:42,820 | INFO     | [payload] failed_post thread has finished
[2026-01-13 13:45:31] 2026-01-13 18:44:42,949 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 13:45:31] 2026-01-13 18:44:43,250 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 13:45:31] 2026-01-13 18:44:43,447 | INFO     | [data] copytool_out thread has finished
[2026-01-13 13:45:31] 2026-01-13 18:44:44,256 | INFO     | [job] queue monitor thread has finished
[2026-01-13 13:45:31] 2026-01-13 18:44:46,779 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 13:45:31] 2026-01-13 18:45:11,714 | INFO     | PID=2860222 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 13:45:31] 2026-01-13 18:45:11,714 | INFO     | .. there are 8 such processes running
[2026-01-13 13:45:31] 2026-01-13 18:45:11,714 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 13:45:31] 2026-01-13 18:45:11,715 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 13:45:31] 2026-01-13 18:45:11,715 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 13:45:31] 2026-01-13 18:45:24,390 | INFO     | [monitor] cgroup control has ended
[2026-01-13 13:45:31] 2026-01-13 18:45:25,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139901138069312)>', '<ExcThread(monitor, started 139900481423104)>']
[2026-01-13 13:45:31] 2026-01-13 18:45:26,804 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 13:45:31] 2026-01-13 18:45:26,804 | INFO     | [monitor] control thread has ended
[2026-01-13 13:45:31] 2026-01-13 18:45:30,834 | INFO     | all workflow threads have been joined
[2026-01-13 13:45:31] 2026-01-13 18:45:30,834 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 13:45:31] 2026-01-13 18:45:30,834 | INFO     | traces error code: 0
[2026-01-13 13:45:31] 2026-01-13 18:45:30,834 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 13:45:31] 2026-01-13 18:45:31,002 [wrapper] ==== pilot stdout END ====
[2026-01-13 13:45:31] 2026-01-13 18:45:31,026 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 13:45:31] 2026-01-13 18:45:31,056 [wrapper] pilotpid: 2860222
[2026-01-13 13:45:31] 2026-01-13 18:45:31,085 [wrapper] Pilot exit status: 0
[2026-01-13 13:45:31] 2026-01-13 18:45:31,130 [wrapper] pandaids: 6966858645
[2026-01-13 13:45:31] 2026-01-13 18:45:31,188 [wrapper] cleanup supervisor_pilot 3028394 2860223
[2026-01-13 13:45:31] 2026-01-13 18:45:31,190 [wrapper] Test setup, not cleaning
[2026-01-13 13:45:31] 2026-01-13 18:45:31,192 [wrapper] apfmon messages muted
[2026-01-13 13:45:31] 2026-01-13 18:45:31,194 [wrapper] ==== wrapper stdout END ====
[2026-01-13 13:45:31] 2026-01-13 18:45:31,196 [wrapper] ==== wrapper stderr END ====
[2026-01-13 13:45:31]  *** Error codes and diagnostics ***
[2026-01-13 13:45:31]     "exeErrorCode": 0,
[2026-01-13 13:45:31]     "exeErrorDiag": "",
[2026-01-13 13:45:31]     "pilotErrorCode": 0,
[2026-01-13 13:45:31]     "pilotErrorDiag": "",
[2026-01-13 13:45:31]  *** Listing of results directory ***
[2026-01-13 13:45:31] total 1825644
[2026-01-13 13:45:31] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 03:42 pilot3.tar.gz
[2026-01-13 13:45:31] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 03:47 queuedata.json
[2026-01-13 13:45:31] -rwx------. 1 boincer umatlas      36322 Jan 12 03:49 runpilot2-wrapper.sh
[2026-01-13 13:45:31] -rw-r--r--. 1 boincer umatlas        100 Jan 12 03:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 13:45:31] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 03:49 run_atlas
[2026-01-13 13:45:31] -rw-r--r--. 1 boincer umatlas        105 Jan 12 03:49 job.xml
[2026-01-13 13:45:31] -rw-r--r--. 2 boincer umatlas  321744430 Jan 12 03:49 EVNT.48118027._000146.pool.root.1
[2026-01-13 13:45:31] -rw-r--r--. 2 boincer umatlas  318198713 Jan 12 03:49 EVNT.48118027._000147.pool.root.1
[2026-01-13 13:45:31] -rw-r--r--. 2 boincer umatlas     592706 Jan 12 03:49 input.tar.gz
[2026-01-13 13:45:31] -rw-r--r--. 2 boincer umatlas      15897 Jan 12 03:49 start_atlas.sh
[2026-01-13 13:45:31] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 03:49 shared
[2026-01-13 13:45:31] -rw-r--r--. 1 boincer umatlas          0 Jan 12 03:49 boinc_lockfile
[2026-01-13 13:45:31] -rw-r--r--. 1 boincer umatlas       3435 Jan 12 03:50 pandaJob.out
[2026-01-13 13:45:31] -rw-------. 1 boincer umatlas         57 Jan 12 03:50 setup.sh.local
[2026-01-13 13:45:31] -rw-------. 1 boincer umatlas     987688 Jan 12 03:50 agis_schedconf.cvmfs.json
[2026-01-13 13:45:31] drwx------. 5 boincer umatlas       4096 Jan 12 03:50 pilot3
[2026-01-13 13:45:31] -rw-r--r--. 1 boincer umatlas        533 Jan 13 13:34 boinc_task_state.xml
[2026-01-13 13:45:31] -rw-r--r--. 1 boincer umatlas       6842 Jan 13 13:39 init_data.xml
[2026-01-13 13:45:31] -rw-------. 1 boincer umatlas 1188323672 Jan 13 13:43 HITS.48187943._000713.pool.root.1
[2026-01-13 13:45:31] -rw-------. 1 boincer umatlas       1051 Jan 13 13:44 memory_monitor_summary.json
[2026-01-13 13:45:31] -rw-------. 1 boincer umatlas         95 Jan 13 13:44 pilot_heartbeat.json
[2026-01-13 13:45:31] -rw-------. 1 boincer umatlas    1516246 Jan 13 13:44 agis_ddmendpoints.agis.ALL.json
[2026-01-13 13:45:31] -rw-------. 1 boincer umatlas    3223668 Jan 13 13:44 log.48187943._000713.job.log.tgz.1
[2026-01-13 13:45:31] -rw-------. 1 boincer umatlas      28152 Jan 13 13:44 heartbeat.json
[2026-01-13 13:45:31] -rw-------. 1 boincer umatlas       5009 Jan 13 13:45 pilotlog.txt
[2026-01-13 13:45:31] -rw-r--r--. 1 boincer umatlas       8192 Jan 13 13:45 boinc_mmap_file
[2026-01-13 13:45:31] -rw-------. 1 boincer umatlas   15388771 Jan 13 13:45 log.48187943._000713.job.log.1
[2026-01-13 13:45:31] -rw-------. 1 boincer umatlas        353 Jan 13 13:45 output.list
[2026-01-13 13:45:31] -rw-r--r--. 1 boincer umatlas         29 Jan 13 13:45 wrapper_checkpoint.txt
[2026-01-13 13:45:31] -rw-r--r--. 1 boincer umatlas        620 Jan 13 13:45 runtime_log
[2026-01-13 13:45:31] -rw-------. 1 boincer umatlas   18647040 Jan 13 13:45 result.tar.gz
[2026-01-13 13:45:31] -rw-r--r--. 1 boincer umatlas       9401 Jan 13 13:45 runtime_log.err
[2026-01-13 13:45:31] -rw-------. 1 boincer umatlas        664 Jan 13 13:45 JvMODm8mSz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5jhKDm9IQ3Yn.diag
[2026-01-13 13:45:31] -rw-r--r--. 1 boincer umatlas      21250 Jan 13 13:45 stderr.txt
[2026-01-13 13:45:31] HITS file was successfully produced:
[2026-01-13 13:45:31] -rw-------. 1 boincer umatlas 1188323672 Jan 13 13:43 shared/HITS.pool.root.1
[2026-01-13 13:45:31]  *** Contents of shared directory: ***
[2026-01-13 13:45:31] total 1804244
[2026-01-13 13:45:31] -rw-r--r--. 2 boincer umatlas  321744430 Jan 12 03:49 ATLAS.root_0
[2026-01-13 13:45:31] -rw-r--r--. 2 boincer umatlas  318198713 Jan 12 03:49 ATLAS.root_1
[2026-01-13 13:45:31] -rw-r--r--. 2 boincer umatlas     592706 Jan 12 03:49 input.tar.gz
[2026-01-13 13:45:31] -rw-r--r--. 2 boincer umatlas      15897 Jan 12 03:49 start_atlas.sh
[2026-01-13 13:45:31] -rw-------. 1 boincer umatlas 1188323672 Jan 13 13:43 HITS.pool.root.1
[2026-01-13 13:45:31] -rw-------. 1 boincer umatlas   18647040 Jan 13 13:45 result.tar.gz
13:45:53 (2852510): run_atlas exited; CPU time 282246.682956
13:45:53 (2852510): called boinc_finish(0)

</stderr_txt>
]]>

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