Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:49:08 (20609): wrapper (7.7.26015): starting
03:49:08 (20609): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 03:49:08] Arguments: --nthreads 8
[2026-01-12 03:49:08] Threads: 8
[2026-01-12 03:49:08] Checking for CVMFS
[2026-01-12 03:49:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 03:49:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 03:49:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 03:49:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 03:49:09] 2.11.2.0 2873 127860 91608 155045 0 80 12253983 20275200 1 130560 0 31723011 99.826 7727904 36016 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 03:49:09] CVMFS is ok
[2026-01-12 03:49:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 03:49:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 03:49:09] Further information can be found at the LHC@home message board.
[2026-01-12 03:49:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 03:49:09] Checking for apptainer binary...
[2026-01-12 03:49:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 03:49:09] Running /usr/bin/apptainer --version
[2026-01-12 03:49:09] apptainer version 1.3.2-1.el7
[2026-01-12 03:49:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 03:49:11] c-115-13.aglt2.org
[2026-01-12 03:49:11] apptainer works
[2026-01-12 03:49:11] Set ATHENA_PROC_NUMBER=8
[2026-01-12 03:49:11] Set ATHENA_CORE_NUMBER=8
[2026-01-12 03:49:11] Starting ATLAS job with PandaID=6966841393
[2026-01-12 03:49:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 17:46:58]  *** The last 200 lines of the pilot log: ***
[2026-01-12 17:46:58] 2026-01-12 22:45:57,457 | INFO     | time since job start (50188s) is within the limit (349056.0s)
[2026-01-12 17:46:58] 2026-01-12 22:45:58,650 | INFO     | monitor loop #3698: job 0:6966841393 is in state 'finished'
[2026-01-12 17:46:58] 2026-01-12 22:45:58,650 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 17:46:58] 2026-01-12 22:45:58,751 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-12 17:46:58] 2026-01-12 22:45:58,757 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1862.125
[2026-01-12 17:46:58] 2026-01-12 22:45:58,760 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966841393/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 17:46:58] 2026-01-12 22:45:58,760 | INFO     | extracted standard info from prmon json
[2026-01-12 17:46:58] 2026-01-12 22:45:58,760 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 17:46:58] 2026-01-12 22:45:58,760 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 17:46:58] 2026-01-12 22:45:58,773 | INFO     | fitting pss+swap vs Time
[2026-01-12 17:46:58] 2026-01-12 22:45:58,774 | INFO     | sum of square deviations: 172224370790.95493
[2026-01-12 17:46:58] 2026-01-12 22:45:58,787 | INFO     | sum of deviations: 1248724413923.325
[2026-01-12 17:46:58] 2026-01-12 22:45:58,787 | INFO     | mean x: 1768232849.0498784
[2026-01-12 17:46:58] 2026-01-12 22:45:58,787 | INFO     | mean y: 3677583.7481751824
[2026-01-12 17:46:58] 2026-01-12 22:45:58,787 | INFO     | intersect: -12817013924.481419
[2026-01-12 17:46:58] 2026-01-12 22:45:58,788 | INFO     | chi2: 5.339442661016217
[2026-01-12 17:46:58] 2026-01-12 22:45:58,789 | INFO     | sum of square deviations: 169100812871.93344
[2026-01-12 17:46:58] 2026-01-12 22:45:58,801 | INFO     | sum of deviations: 1576439335366.4863
[2026-01-12 17:46:58] 2026-01-12 22:45:58,801 | INFO     | mean x: 1768232696.5532436
[2026-01-12 17:46:58] 2026-01-12 22:45:58,801 | INFO     | mean y: 3693576.023255814
[2026-01-12 17:46:58] 2026-01-12 22:45:58,801 | INFO     | intersect: -16480624444.60492
[2026-01-12 17:46:58] 2026-01-12 22:45:58,802 | INFO     | chi2: 2.5795793301786887
[2026-01-12 17:46:58] 2026-01-12 22:45:58,802 | INFO     | current chi2=2.5795793301786887 (change=51.688228642055755 %)
[2026-01-12 17:46:58] 2026-01-12 22:45:58,803 | INFO     | sum of square deviations: 166015206072.50598
[2026-01-12 17:46:58] 2026-01-12 22:45:58,815 | INFO     | sum of deviations: 1594802425994.0327
[2026-01-12 17:46:58] 2026-01-12 22:45:58,815 | INFO     | mean x: 1768232544.0554187
[2026-01-12 17:46:58] 2026-01-12 22:45:58,815 | INFO     | mean y: 3694476.28817734
[2026-01-12 17:46:58] 2026-01-12 22:45:58,815 | INFO     | intersect: -16982590200.246662
[2026-01-12 17:46:58] 2026-01-12 22:45:58,816 | INFO     | chi2: 2.486940025675367
[2026-01-12 17:46:58] 2026-01-12 22:45:58,816 | INFO     | current chi2=2.486940025675367 (change=3.5912562726615054 %)
[2026-01-12 17:46:58] 2026-01-12 22:45:58,816 | INFO     | right removable region: 811
[2026-01-12 17:46:58] 2026-01-12 22:45:58,817 | INFO     | sum of square deviations: 169100537151.93353
[2026-01-12 17:46:58] 2026-01-12 22:45:58,829 | INFO     | sum of deviations: 958129883631.3828
[2026-01-12 17:46:58] 2026-01-12 22:45:58,829 | INFO     | mean x: 1768233001.5532436
[2026-01-12 17:46:58] 2026-01-12 22:45:58,829 | INFO     | mean y: 3691749.0257037943
[2026-01-12 17:46:58] 2026-01-12 22:45:58,830 | INFO     | intersect: -10015181688.90535
[2026-01-12 17:46:58] 2026-01-12 22:45:58,830 | INFO     | chi2: 3.02892808406024
[2026-01-12 17:46:58] 2026-01-12 22:45:58,831 | INFO     | current chi2=3.02892808406024 (change=43.272579623811026 %)
[2026-01-12 17:46:58] 2026-01-12 22:45:58,831 | INFO     | sum of square deviations: 166014704225.39478
[2026-01-12 17:46:58] 2026-01-12 22:45:58,844 | INFO     | sum of deviations: 912008438816.0226
[2026-01-12 17:46:58] 2026-01-12 22:45:58,844 | INFO     | mean x: 1768233154.0566502
[2026-01-12 17:46:58] 2026-01-12 22:45:58,844 | INFO     | mean y: 3694026.9125615763
[2026-01-12 17:46:58] 2026-01-12 22:45:58,844 | INFO     | intersect: -9710165753.269823
[2026-01-12 17:46:58] 2026-01-12 22:45:58,845 | INFO     | chi2: 3.0102559428568205
[2026-01-12 17:46:58] 2026-01-12 22:45:58,845 | INFO     | current chi2=3.0102559428568205 (change=0.6164603676687456 %)
[2026-01-12 17:46:58] 2026-01-12 22:45:58,845 | INFO     | left removable region: 20
[2026-01-12 17:46:58] 2026-01-12 22:45:58,846 | INFO     | sum of square deviations: 153464483393.8558
[2026-01-12 17:46:58] 2026-01-12 22:45:58,857 | INFO     | sum of deviations: 1202876728287.391
[2026-01-12 17:46:58] 2026-01-12 22:45:58,857 | INFO     | mean x: 1768233123.5701644
[2026-01-12 17:46:58] 2026-01-12 22:45:58,858 | INFO     | mean y: 3713874.5335018965
[2026-01-12 17:46:58] 2026-01-12 22:45:58,858 | INFO     | intersect: -13855952072.21695
[2026-01-12 17:46:58] 2026-01-12 22:45:58,858 | INFO     | chi2: 0.13594166841361602
[2026-01-12 17:46:58] 2026-01-12 22:45:58,859 | INFO     | current memory leak: 7.84 B/s (using 791 data points, chi2=0.14)
[2026-01-12 17:46:58] 2026-01-12 22:45:58,859 | INFO     | could have reported an average CPU frequency of 2415 MHz (31 samples)
[2026-01-12 17:46:58] 2026-01-12 22:45:58,860 | INFO     | ..............................
[2026-01-12 17:46:58] 2026-01-12 22:45:58,860 | INFO     | . Timing measurements:
[2026-01-12 17:46:58] 2026-01-12 22:45:58,860 | INFO     | . get job = 0 s
[2026-01-12 17:46:58] 2026-01-12 22:45:58,860 | INFO     | . initial setup = 2 s
[2026-01-12 17:46:58] 2026-01-12 22:45:58,860 | INFO     | . payload setup = 16 s
[2026-01-12 17:46:58] 2026-01-12 22:45:58,860 | INFO     | . stage-in = 0 s
[2026-01-12 17:46:58] 2026-01-12 22:45:58,860 | INFO     | . payload execution = 50139 s
[2026-01-12 17:46:58] 2026-01-12 22:45:58,860 | INFO     | . stage-out = 4 s
[2026-01-12 17:46:58] 2026-01-12 22:45:58,860 | INFO     | . log creation = 0 s
[2026-01-12 17:46:58] 2026-01-12 22:45:58,860 | INFO     | ..............................
[2026-01-12 17:46:58] 2026-01-12 22:45:59,236 | INFO     | 
[2026-01-12 17:46:58] 2026-01-12 22:45:59,237 | INFO     | job summary report
[2026-01-12 17:46:58] 2026-01-12 22:45:59,237 | INFO     | --------------------------------------------------
[2026-01-12 17:46:58] 2026-01-12 22:45:59,237 | INFO     | PanDA job id: 6966841393
[2026-01-12 17:46:58] 2026-01-12 22:45:59,237 | INFO     | task id: 48187943
[2026-01-12 17:46:58] 2026-01-12 22:45:59,237 | INFO     | errors: (none)
[2026-01-12 17:46:58] 2026-01-12 22:45:59,237 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 17:46:58] 2026-01-12 22:45:59,238 | INFO     | pilot state: finished 
[2026-01-12 17:46:58] 2026-01-12 22:45:59,238 | INFO     | transexitcode: 0
[2026-01-12 17:46:58] 2026-01-12 22:45:59,238 | INFO     | exeerrorcode: 0
[2026-01-12 17:46:58] 2026-01-12 22:45:59,238 | INFO     | exeerrordiag: 
[2026-01-12 17:46:58] 2026-01-12 22:45:59,238 | INFO     | exitcode: 0
[2026-01-12 17:46:58] 2026-01-12 22:45:59,238 | INFO     | exitmsg: OK
[2026-01-12 17:46:58] 2026-01-12 22:45:59,238 | INFO     | cpuconsumptiontime: 390911 s
[2026-01-12 17:46:58] 2026-01-12 22:45:59,239 | INFO     | nevents: 2050
[2026-01-12 17:46:58] 2026-01-12 22:45:59,239 | INFO     | neventsw: 0
[2026-01-12 17:46:58] 2026-01-12 22:45:59,239 | INFO     | pid: 32031
[2026-01-12 17:46:58] 2026-01-12 22:45:59,239 | INFO     | pgrp: 32031
[2026-01-12 17:46:58] 2026-01-12 22:45:59,239 | INFO     | corecount: 8
[2026-01-12 17:46:58] 2026-01-12 22:45:59,239 | INFO     | event service: False
[2026-01-12 17:46:58] 2026-01-12 22:45:59,239 | INFO     | sizes: {0: 2284448, 1: 2284647, 6: 2284909, 11: 2284937, 50159: 2353080, 50164: 2362294, 50172: 2362484}
[2026-01-12 17:46:58] 2026-01-12 22:45:59,240 | INFO     | --------------------------------------------------
[2026-01-12 17:46:58] 2026-01-12 22:45:59,240 | INFO     | 
[2026-01-12 17:46:58] 2026-01-12 22:45:59,240 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-12 17:46:58] 2026-01-12 22:45:59,270 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 17:46:58] 2026-01-12 22:45:59,270 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 17:46:58] 2026-01-12 22:45:59,270 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 17:46:58] 2026-01-12 22:45:59,271 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 17:46:58] 2026-01-12 22:45:59,271 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 17:46:58] 2026-01-12 22:45:59,271 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 17:46:58] 2026-01-12 22:45:59,271 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 17:46:58] 2026-01-12 22:45:59,271 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 17:46:58] 2026-01-12 22:45:59,271 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 17:46:58] 2026-01-12 22:45:59,272 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 17:46:58] 2026-01-12 22:45:59,272 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 17:46:58] 2026-01-12 22:45:59,272 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 17:46:58] 2026-01-12 22:45:59,272 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 17:46:58] 2026-01-12 22:45:59,272 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 17:46:58] 2026-01-12 22:45:59,273 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 17:46:58] 2026-01-12 22:45:59,273 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 17:46:58] 2026-01-12 22:45:59,273 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 17:46:58] 2026-01-12 22:45:59,273 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 17:46:58] 2026-01-12 22:45:59,273 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 17:46:58] 2026-01-12 22:45:59,273 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 17:46:58] 2026-01-12 22:45:59,274 | INFO     | job 6966841393 has completed (purged errors)
[2026-01-12 17:46:58] 2026-01-12 22:45:59,274 | INFO     | overall cleanup function is called
[2026-01-12 17:46:58] 2026-01-12 22:46:00,291 | INFO     | --- collectZombieJob: --- 10, [32031]
[2026-01-12 17:46:58] 2026-01-12 22:46:00,291 | INFO     | zombie collector waiting for pid 32031
[2026-01-12 17:46:58] 2026-01-12 22:46:00,291 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 17:46:58] 2026-01-12 22:46:00,291 | INFO     | collected zombie processes
[2026-01-12 17:46:58] 2026-01-12 22:46:00,291 | INFO     | will attempt to kill all subprocesses of pid=32031
[2026-01-12 17:46:58] 2026-01-12 22:46:00,374 | INFO     | process IDs to be killed: [32031] (in reverse order)
[2026-01-12 17:46:58] 2026-01-12 22:46:00,430 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 17:46:58] 2026-01-12 22:46:00,431 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 17:46:58] 2026-01-12 22:46:00,435 | INFO     | did not find any defunct processes belonging to 32031
[2026-01-12 17:46:58] 2026-01-12 22:46:00,438 | INFO     | did not find any defunct processes belonging to 32031
[2026-01-12 17:46:58] 2026-01-12 22:46:00,438 | INFO     | ready for new job
[2026-01-12 17:46:58] 2026-01-12 22:46:00,438 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 17:46:58] 2026-01-12 22:46:00,443 | INFO     | ***************************************
[2026-01-12 17:46:58] 2026-01-12 22:46:00,443 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 17:46:58] 2026-01-12 22:46:00,443 | INFO     | ***************************************
[2026-01-12 17:46:58] 2026-01-12 22:46:00,443 | INFO     | 
[2026-01-12 17:46:58] 2026-01-12 22:46:00,444 | INFO     | architecture information:
[2026-01-12 17:46:58] 2026-01-12 22:46:00,445 | INFO     | executing command: cat /etc/os-release
[2026-01-12 17:46:58] 2026-01-12 22:46:00,462 | INFO     | cat /etc/os-release:
[2026-01-12 17:46:58] NAME="CentOS Linux"
[2026-01-12 17:46:58] VERSION="7 (Core)"
[2026-01-12 17:46:58] ID="centos"
[2026-01-12 17:46:58] ID_LIKE="rhel fedora"
[2026-01-12 17:46:58] VERSION_ID="7"
[2026-01-12 17:46:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 17:46:58] ANSI_COLOR="0;31"
[2026-01-12 17:46:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 17:46:58] HOME_URL="https://www.centos.org/"
[2026-01-12 17:46:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 17:46:58] 
[2026-01-12 17:46:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 17:46:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 17:46:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 17:46:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 17:46:58] 
[2026-01-12 17:46:58] 2026-01-12 22:46:00,463 | INFO     | ***************************************
[2026-01-12 17:46:58] 2026-01-12 22:46:00,966 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-12 17:46:58] 2026-01-12 22:46:00,986 | INFO     | sufficient remaining disk space (17352884224 B)
[2026-01-12 17:46:58] 2026-01-12 22:46:00,987 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 17:46:58] 2026-01-12 22:46:00,987 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 17:46:58] 2026-01-12 22:46:00,987 | INFO     | update_server=False
[2026-01-12 17:46:58] 2026-01-12 22:46:00,987 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 17:46:58] 2026-01-12 22:46:01,154 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-12 17:46:58] 2026-01-12 22:46:01,154 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-12 17:46:58] 2026-01-12 22:46:01,155 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 17:46:58] 2026-01-12 22:46:01,155 | INFO     | will abort loop
[2026-01-12 17:46:58] 2026-01-12 22:46:01,340 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 17:46:58] 2026-01-12 22:46:01,400 | INFO     | all payload control threads have been joined
[2026-01-12 17:46:58] 2026-01-12 22:46:01,754 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 17:46:58] 2026-01-12 22:46:01,993 | INFO     | [job] retrieve thread has finished
[2026-01-12 17:46:58] 2026-01-12 22:46:02,005 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 17:46:58] 2026-01-12 22:46:02,057 | INFO     | all data control threads have been joined
[2026-01-12 17:46:58] 2026-01-12 22:46:02,160 | INFO     | [job] job monitor thread has finished
[2026-01-12 17:46:58] 2026-01-12 22:46:02,274 | INFO     | [payload] failed_post thread has finished
[2026-01-12 17:46:58] 2026-01-12 22:46:02,305 | INFO     | all job control threads have been joined
[2026-01-12 17:46:58] 2026-01-12 22:46:02,408 | INFO     | [payload] control thread has finished
[2026-01-12 17:46:58] 2026-01-12 22:46:02,958 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 17:46:58] 2026-01-12 22:46:02,977 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 17:46:58] 2026-01-12 22:46:03,008 | INFO     | [job] validate thread has finished
[2026-01-12 17:46:58] 2026-01-12 22:46:03,016 | INFO     | [data] copytool_in thread has finished
[2026-01-12 17:46:58] 2026-01-12 22:46:03,029 | INFO     | [payload] validate_post thread has finished
[2026-01-12 17:46:58] 2026-01-12 22:46:03,061 | INFO     | [data] control thread has finished
[2026-01-12 17:46:58] 2026-01-12 22:46:03,309 | INFO     | [job] control thread has finished
[2026-01-12 17:46:58] 2026-01-12 22:46:03,346 | INFO     | [data] copytool_out thread has finished
[2026-01-12 17:46:58] 2026-01-12 22:46:03,406 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 17:46:58] 2026-01-12 22:46:03,956 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 17:46:58] 2026-01-12 22:46:04,963 | INFO     | [job] queue monitor thread has finished
[2026-01-12 17:46:58] 2026-01-12 22:46:05,759 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 17:46:58] 2026-01-12 22:46:30,671 | INFO     | PID=24723 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-12 17:46:58] 2026-01-12 22:46:30,671 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 17:46:58] 2026-01-12 22:46:30,671 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 17:46:58] 2026-01-12 22:46:30,671 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 17:46:58] 2026-01-12 22:46:52,614 | INFO     | [monitor] cgroup control has ended
[2026-01-12 17:46:58] 2026-01-12 22:46:52,682 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140325987641152)>', '<ExcThread(monitor, started 140324961773312)>']
[2026-01-12 17:46:58] 2026-01-12 22:46:52,784 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 17:46:58] 2026-01-12 22:46:52,784 | INFO     | [monitor] control thread has ended
[2026-01-12 17:46:58] 2026-01-12 22:46:57,704 | INFO     | all workflow threads have been joined
[2026-01-12 17:46:58] 2026-01-12 22:46:57,705 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 17:46:58] 2026-01-12 22:46:57,706 | INFO     | traces error code: 0
[2026-01-12 17:46:58] 2026-01-12 22:46:57,708 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 17:46:58] 2026-01-12 22:46:57,814 [wrapper] ==== pilot stdout END ====
[2026-01-12 17:46:58] 2026-01-12 22:46:57,818 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 17:46:58] 2026-01-12 22:46:57,823 [wrapper] pilotpid: 24723
[2026-01-12 17:46:58] 2026-01-12 22:46:57,827 [wrapper] Pilot exit status: 0
[2026-01-12 17:46:58] 2026-01-12 22:46:57,843 [wrapper] pandaids: 6966841393
[2026-01-12 17:46:58] 2026-01-12 22:46:57,896 [wrapper] cleanup supervisor_pilot 28383 24724
[2026-01-12 17:46:58] 2026-01-12 22:46:57,901 [wrapper] Test setup, not cleaning
[2026-01-12 17:46:58] 2026-01-12 22:46:57,906 [wrapper] apfmon messages muted
[2026-01-12 17:46:58] 2026-01-12 22:46:57,911 [wrapper] ==== wrapper stdout END ====
[2026-01-12 17:46:58] 2026-01-12 22:46:57,916 [wrapper] ==== wrapper stderr END ====
[2026-01-12 17:46:58]  *** Error codes and diagnostics ***
[2026-01-12 17:46:58]     "exeErrorCode": 0,
[2026-01-12 17:46:58]     "exeErrorDiag": "",
[2026-01-12 17:46:58]     "pilotErrorCode": 0,
[2026-01-12 17:46:58]     "pilotErrorDiag": "",
[2026-01-12 17:46:58]  *** Listing of results directory ***
[2026-01-12 17:46:58] total 1502080
[2026-01-12 17:46:58] -rw-r--r-- 1 boincer umatlas     579449 Jan 12 03:42 pilot3.tar.gz
[2026-01-12 17:46:58] -rwx------ 1 boincer umatlas      36322 Jan 12 03:47 runpilot2-wrapper.sh
[2026-01-12 17:46:58] -rw-r--r-- 1 boincer umatlas       5112 Jan 12 03:47 queuedata.json
[2026-01-12 17:46:58] -rw-r--r-- 1 boincer umatlas        100 Jan 12 03:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 17:46:58] -rwxr-xr-x 1 boincer umatlas       7986 Jan 12 03:49 run_atlas
[2026-01-12 17:46:58] -rw-r--r-- 1 boincer umatlas        105 Jan 12 03:49 job.xml
[2026-01-12 17:46:58] -rw-r--r-- 2 boincer umatlas  323432526 Jan 12 03:49 EVNT.48118027._000041.pool.root.1
[2026-01-12 17:46:58] -rw-r--r-- 2 boincer umatlas      15847 Jan 12 03:49 start_atlas.sh
[2026-01-12 17:46:58] drwxrwx--x 2 boincer umatlas       4096 Jan 12 03:49 shared
[2026-01-12 17:46:58] -rw-r--r-- 2 boincer umatlas     592611 Jan 12 03:49 input.tar.gz
[2026-01-12 17:46:58] -rw-r--r-- 1 boincer umatlas          0 Jan 12 03:49 boinc_lockfile
[2026-01-12 17:46:58] -rw-r--r-- 1 boincer umatlas       2895 Jan 12 03:49 pandaJob.out
[2026-01-12 17:46:58] -rw------- 1 boincer umatlas         57 Jan 12 03:49 setup.sh.local
[2026-01-12 17:46:58] -rw------- 1 boincer umatlas     987688 Jan 12 03:49 agis_schedconf.cvmfs.json
[2026-01-12 17:46:58] drwx------ 5 boincer umatlas       4096 Jan 12 03:49 pilot3
[2026-01-12 17:46:58] -rw-r--r-- 1 boincer umatlas       5911 Jan 12 17:38 init_data.xml
[2026-01-12 17:46:58] -rw-r--r-- 1 boincer umatlas        533 Jan 12 17:38 boinc_task_state.xml
[2026-01-12 17:46:58] -rw------- 1 boincer umatlas 1192153856 Jan 12 17:45 HITS.48187943._000197.pool.root.1
[2026-01-12 17:46:58] -rw------- 1 boincer umatlas       1062 Jan 12 17:45 memory_monitor_summary.json
[2026-01-12 17:46:58] -rw------- 1 boincer umatlas    1516240 Jan 12 17:45 agis_ddmendpoints.agis.ALL.json
[2026-01-12 17:46:58] -rw------- 1 boincer umatlas    2392511 Jan 12 17:45 log.48187943._000197.job.log.tgz.1
[2026-01-12 17:46:58] -rw------- 1 boincer umatlas         95 Jan 12 17:45 pilot_heartbeat.json
[2026-01-12 17:46:58] -rw------- 1 boincer umatlas      28138 Jan 12 17:45 heartbeat.json
[2026-01-12 17:46:58] -rw-r--r-- 1 boincer umatlas       8192 Jan 12 17:46 boinc_mmap_file
[2026-01-12 17:46:58] -rw-r--r-- 1 boincer umatlas         29 Jan 12 17:46 wrapper_checkpoint.txt
[2026-01-12 17:46:58] -rw------- 1 boincer umatlas       4932 Jan 12 17:46 pilotlog.txt
[2026-01-12 17:46:58] -rw------- 1 boincer umatlas    6900123 Jan 12 17:46 log.48187943._000197.job.log.1
[2026-01-12 17:46:58] -rw------- 1 boincer umatlas        353 Jan 12 17:46 output.list
[2026-01-12 17:46:58] -rw-r--r-- 1 boincer umatlas        620 Jan 12 17:46 runtime_log
[2026-01-12 17:46:58] -rw------- 1 boincer umatlas    9328640 Jan 12 17:46 result.tar.gz
[2026-01-12 17:46:58] -rw-r--r-- 1 boincer umatlas       9343 Jan 12 17:46 runtime_log.err
[2026-01-12 17:46:58] -rw------- 1 boincer umatlas        668 Jan 12 17:46 ouwKDm2kSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmr9mKDmnBp3Mo.diag
[2026-01-12 17:46:58] -rw-r--r-- 1 boincer umatlas      21190 Jan 12 17:46 stderr.txt
[2026-01-12 17:46:58] HITS file was successfully produced:
[2026-01-12 17:46:58] -rw------- 1 boincer umatlas 1192153856 Jan 12 17:45 shared/HITS.pool.root.1
[2026-01-12 17:46:58]  *** Contents of shared directory: ***
[2026-01-12 17:46:58] total 1489784
[2026-01-12 17:46:58] -rw-r--r-- 2 boincer umatlas  323432526 Jan 12 03:49 ATLAS.root_0
[2026-01-12 17:46:58] -rw-r--r-- 2 boincer umatlas      15847 Jan 12 03:49 start_atlas.sh
[2026-01-12 17:46:58] -rw-r--r-- 2 boincer umatlas     592611 Jan 12 03:49 input.tar.gz
[2026-01-12 17:46:58] -rw------- 1 boincer umatlas 1192153856 Jan 12 17:45 HITS.pool.root.1
[2026-01-12 17:46:58] -rw------- 1 boincer umatlas    9328640 Jan 12 17:46 result.tar.gz
17:46:59 (20609): run_atlas exited; CPU time 387619.544370
17:46:59 (20609): called boinc_finish(0)

</stderr_txt>
]]>

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