Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:48:47 (3905470): wrapper (7.7.26015): starting
03:48:47 (3905470): wrapper: running run_atlas (--nthreads 9)
[2026-01-12 03:48:47] Arguments: --nthreads 9
[2026-01-12 03:48:47] Threads: 9
[2026-01-12 03:48:47] Checking for CVMFS
[2026-01-12 03:48:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 03:48:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 03:48:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 03:48:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 03:48:48] 2.13.3.0 6454 26294 246356 155045 0 137 35251397 40960001 11689 16776704 0 30013226 99.750 27953355 34458 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 03:48:48] CVMFS is ok
[2026-01-12 03:48:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 03:48:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 03:48:48] Further information can be found at the LHC@home message board.
[2026-01-12 03:48:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 03:48:48] Checking for apptainer binary...
[2026-01-12 03:48:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 03:48:48] Running /usr/bin/apptainer --version
[2026-01-12 03:48:48] apptainer version 1.4.5-2.el9
[2026-01-12 03:48:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 03:48:48] c-206-40.aglt2.org
[2026-01-12 03:48:48] apptainer works
[2026-01-12 03:48:48] Set ATHENA_PROC_NUMBER=9
[2026-01-12 03:48:48] Set ATHENA_CORE_NUMBER=9
[2026-01-12 03:48:48] Starting ATLAS job with PandaID=6966840796
[2026-01-12 03:48:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 22:40:06]  *** The last 200 lines of the pilot log: ***
[2026-01-12 22:40:06] 2026-01-13 03:38:44,372 | INFO     | monitor loop #4441: job 0:6966840796 is in state 'finished'
[2026-01-12 22:40:06] 2026-01-13 03:38:44,373 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 22:40:06] 2026-01-13 03:38:44,411 | INFO     | time since job start (67782s) is within the limit (349056.0s)
[2026-01-12 22:40:06] 2026-01-13 03:38:46,455 | INFO     | PID=3909431 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 22:40:06] 2026-01-13 03:38:46,456 | INFO     | .. there are 12 such processes running
[2026-01-12 22:40:06] 2026-01-13 03:38:46,879 | INFO     | monitor loop #4442: job 0:6966840796 is in state 'finished'
[2026-01-12 22:40:06] 2026-01-13 03:38:46,880 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 22:40:06] 2026-01-13 03:38:47,457 | INFO     | time since job start (67785s) is within the limit (349056.0s)
[2026-01-12 22:40:06] 2026-01-13 03:38:49,384 | INFO     | monitor loop #4443: job 0:6966840796 is in state 'finished'
[2026-01-12 22:40:06] 2026-01-13 03:38:49,385 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 22:40:06] 2026-01-13 03:38:49,464 | INFO     | time since job start (67787s) is within the limit (349056.0s)
[2026-01-12 22:40:06] 2026-01-13 03:38:51,471 | INFO     | time since job start (67789s) is within the limit (349056.0s)
[2026-01-12 22:40:06] 2026-01-13 03:38:51,889 | INFO     | monitor loop #4444: job 0:6966840796 is in state 'finished'
[2026-01-12 22:40:06] 2026-01-13 03:38:51,890 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 22:40:06] 2026-01-13 03:38:53,478 | INFO     | time since job start (67791s) is within the limit (349056.0s)
[2026-01-12 22:40:06] 2026-01-13 03:38:54,275 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 22:40:06] 2026-01-13 03:38:54,301 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3291.4037187500003
[2026-01-12 22:40:06] 2026-01-13 03:38:54,372 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966840796/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 22:40:06] 2026-01-13 03:38:54,372 | INFO     | extracted standard info from prmon json
[2026-01-12 22:40:06] 2026-01-13 03:38:54,372 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 22:40:06] 2026-01-13 03:38:54,372 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 22:40:06] 2026-01-13 03:38:54,398 | INFO     | monitor loop #4445: job 0:6966840796 is in state 'finished'
[2026-01-12 22:40:06] 2026-01-13 03:38:54,399 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 22:40:06] 2026-01-13 03:38:54,415 | INFO     | fitting pss+swap vs Time
[2026-01-12 22:40:06] 2026-01-13 03:38:54,417 | INFO     | sum of square deviations: 424063068368.9362
[2026-01-12 22:40:06] 2026-01-13 03:38:54,571 | INFO     | sum of deviations: -4363231097772.996
[2026-01-12 22:40:06] 2026-01-13 03:38:54,571 | INFO     | mean x: 1768241606.144144
[2026-01-12 22:40:06] 2026-01-13 03:38:54,571 | INFO     | mean y: 3399920.2
[2026-01-12 22:40:06] 2026-01-13 03:38:54,571 | INFO     | intersect: 18197030395.9195
[2026-01-12 22:40:06] 2026-01-13 03:38:54,572 | INFO     | chi2: 74.50660528700679
[2026-01-12 22:40:06] 2026-01-13 03:38:54,583 | INFO     | sum of square deviations: 418358597082.86017
[2026-01-12 22:40:06] 2026-01-13 03:38:54,671 | INFO     | sum of deviations: -3855834338577.729
[2026-01-12 22:40:06] 2026-01-13 03:38:54,672 | INFO     | mean x: 1768241453.6515837
[2026-01-12 22:40:06] 2026-01-13 03:38:54,672 | INFO     | mean y: 3413482.156561086
[2026-01-12 22:40:06] 2026-01-13 03:38:54,672 | INFO     | intersect: 16300547480.184555
[2026-01-12 22:40:06] 2026-01-13 03:38:54,673 | INFO     | chi2: 69.17588377554634
[2026-01-12 22:40:06] 2026-01-13 03:38:54,673 | INFO     | current chi2=69.17588377554634 (change=7.154696541234147 %)
[2026-01-12 22:40:06] 2026-01-13 03:38:54,673 | INFO     | right removable region: 1104
[2026-01-12 22:40:06] 2026-01-13 03:38:54,674 | INFO     | sum of square deviations: 418357551301.16296
[2026-01-12 22:40:06] 2026-01-13 03:38:54,870 | INFO     | sum of deviations: -4728216288673.839
[2026-01-12 22:40:06] 2026-01-13 03:38:54,870 | INFO     | mean x: 1768241758.6506786
[2026-01-12 22:40:06] 2026-01-13 03:38:54,870 | INFO     | mean y: 3409665.0470588235
[2026-01-12 22:40:06] 2026-01-13 03:38:54,870 | INFO     | intersect: 19987821227.746086
[2026-01-12 22:40:06] 2026-01-13 03:38:54,871 | INFO     | chi2: 72.39104898949456
[2026-01-12 22:40:06] 2026-01-13 03:38:54,871 | INFO     | current chi2=72.39104898949456 (change=2.839421135029433 %)
[2026-01-12 22:40:06] 2026-01-13 03:38:54,871 | INFO     | left removable region: 10
[2026-01-12 22:40:06] 2026-01-13 03:38:54,872 | INFO     | sum of square deviations: 405987523939.03827
[2026-01-12 22:40:06] 2026-01-13 03:38:55,023 | INFO     | sum of deviations: -4207146309049.4473
[2026-01-12 22:40:06] 2026-01-13 03:38:55,023 | INFO     | mean x: 1768241728.1627057
[2026-01-12 22:40:06] 2026-01-13 03:38:55,023 | INFO     | mean y: 3427912.9351005484
[2026-01-12 22:40:06] 2026-01-13 03:38:55,023 | INFO     | intersect: 18327270941.333176
[2026-01-12 22:40:06] 2026-01-13 03:38:55,056 | INFO     | chi2: 66.10457527340557
[2026-01-12 22:40:06] 2026-01-13 03:38:55,056 | INFO     | current memory leak: -10.36 B/s (using 1094 data points, chi2=66.10)
[2026-01-12 22:40:06] 2026-01-13 03:38:55,057 | INFO     | could have reported an average CPU frequency of 3286 MHz (40 samples)
[2026-01-12 22:40:06] 2026-01-13 03:38:55,058 | INFO     | ..............................
[2026-01-12 22:40:06] 2026-01-13 03:38:55,058 | INFO     | . Timing measurements:
[2026-01-12 22:40:06] 2026-01-13 03:38:55,058 | INFO     | . get job = 0 s
[2026-01-12 22:40:06] 2026-01-13 03:38:55,058 | INFO     | . initial setup = 2 s
[2026-01-12 22:40:06] 2026-01-13 03:38:55,058 | INFO     | . payload setup = 14 s
[2026-01-12 22:40:06] 2026-01-13 03:38:55,058 | INFO     | . stage-in = 0 s
[2026-01-12 22:40:06] 2026-01-13 03:38:55,058 | INFO     | . payload execution = 67712 s
[2026-01-12 22:40:06] 2026-01-13 03:38:55,058 | INFO     | . stage-out = 15 s
[2026-01-12 22:40:06] 2026-01-13 03:38:55,058 | INFO     | . log creation = 2 s
[2026-01-12 22:40:06] 2026-01-13 03:38:55,058 | INFO     | ..............................
[2026-01-12 22:40:06] 2026-01-13 03:38:55,252 | INFO     | 
[2026-01-12 22:40:06] 2026-01-13 03:38:55,254 | INFO     | job summary report
[2026-01-12 22:40:06] 2026-01-13 03:38:55,254 | INFO     | --------------------------------------------------
[2026-01-12 22:40:06] 2026-01-13 03:38:55,254 | INFO     | PanDA job id: 6966840796
[2026-01-12 22:40:06] 2026-01-13 03:38:55,254 | INFO     | task id: 48187943
[2026-01-12 22:40:06] 2026-01-13 03:38:55,254 | INFO     | errors: (none)
[2026-01-12 22:40:06] 2026-01-13 03:38:55,254 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 22:40:06] 2026-01-13 03:38:55,254 | INFO     | pilot state: finished 
[2026-01-12 22:40:06] 2026-01-13 03:38:55,254 | INFO     | transexitcode: 0
[2026-01-12 22:40:06] 2026-01-13 03:38:55,254 | INFO     | exeerrorcode: 0
[2026-01-12 22:40:06] 2026-01-13 03:38:55,254 | INFO     | exeerrordiag: 
[2026-01-12 22:40:06] 2026-01-13 03:38:55,254 | INFO     | exitcode: 0
[2026-01-12 22:40:06] 2026-01-13 03:38:55,254 | INFO     | exitmsg: OK
[2026-01-12 22:40:06] 2026-01-13 03:38:55,255 | INFO     | cpuconsumptiontime: 240610 s
[2026-01-12 22:40:06] 2026-01-13 03:38:55,255 | INFO     | nevents: 2050
[2026-01-12 22:40:06] 2026-01-13 03:38:55,255 | INFO     | neventsw: 0
[2026-01-12 22:40:06] 2026-01-13 03:38:55,255 | INFO     | pid: 3926960
[2026-01-12 22:40:06] 2026-01-13 03:38:55,255 | INFO     | pgrp: 3926960
[2026-01-12 22:40:06] 2026-01-13 03:38:55,255 | INFO     | corecount: 9
[2026-01-12 22:40:06] 2026-01-13 03:38:55,255 | INFO     | event service: False
[2026-01-12 22:40:06] 2026-01-13 03:38:55,255 | INFO     | sizes: {0: 2284446, 1: 2284645, 6: 2284907, 11: 2284935, 67733: 2362855, 67750: 2371853, 67752: 2372037, 67777: 2372283}
[2026-01-12 22:40:06] 2026-01-13 03:38:55,255 | INFO     | --------------------------------------------------
[2026-01-12 22:40:06] 2026-01-13 03:38:55,255 | INFO     | 
[2026-01-12 22:40:06] 2026-01-13 03:38:55,255 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-12 22:40:06] 2026-01-13 03:38:55,435 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 22:40:06] 2026-01-13 03:38:55,435 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 22:40:06] 2026-01-13 03:38:55,435 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 22:40:06] 2026-01-13 03:38:55,435 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 22:40:06] 2026-01-13 03:38:55,435 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 22:40:06] 2026-01-13 03:38:55,435 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 22:40:06] 2026-01-13 03:38:55,436 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 22:40:06] 2026-01-13 03:38:55,436 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 22:40:06] 2026-01-13 03:38:55,436 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 22:40:06] 2026-01-13 03:38:55,436 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 22:40:06] 2026-01-13 03:38:55,436 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 22:40:06] 2026-01-13 03:38:55,436 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 22:40:06] 2026-01-13 03:38:55,436 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 22:40:06] 2026-01-13 03:38:55,436 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 22:40:06] 2026-01-13 03:38:55,436 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 22:40:06] 2026-01-13 03:38:55,436 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 22:40:06] 2026-01-13 03:38:55,436 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 22:40:06] 2026-01-13 03:38:55,436 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 22:40:06] 2026-01-13 03:38:55,436 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 22:40:06] 2026-01-13 03:38:55,436 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 22:40:06] 2026-01-13 03:38:55,437 | INFO     | job 6966840796 has completed (purged errors)
[2026-01-12 22:40:06] 2026-01-13 03:38:55,437 | INFO     | overall cleanup function is called
[2026-01-12 22:40:06] 2026-01-13 03:38:56,542 | INFO     | --- collectZombieJob: --- 10, [3926960]
[2026-01-12 22:40:06] 2026-01-13 03:38:56,543 | INFO     | zombie collector waiting for pid 3926960
[2026-01-12 22:40:06] 2026-01-13 03:38:56,543 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 22:40:06] 2026-01-13 03:38:56,543 | INFO     | collected zombie processes
[2026-01-12 22:40:06] 2026-01-13 03:38:56,543 | INFO     | will attempt to kill all subprocesses of pid=3926960
[2026-01-12 22:40:06] 2026-01-13 03:38:57,791 | INFO     | process IDs to be killed: [3926960] (in reverse order)
[2026-01-12 22:40:06] 2026-01-13 03:38:58,832 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 22:40:06] 2026-01-13 03:38:58,833 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 22:40:06] 2026-01-13 03:38:58,963 | INFO     | did not find any defunct processes belonging to 3926960
[2026-01-12 22:40:06] 2026-01-13 03:38:59,008 | INFO     | did not find any defunct processes belonging to 3926960
[2026-01-12 22:40:06] 2026-01-13 03:38:59,008 | INFO     | ready for new job
[2026-01-12 22:40:06] 2026-01-13 03:38:59,009 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 22:40:06] 2026-01-13 03:38:59,052 | INFO     | ***************************************
[2026-01-12 22:40:06] 2026-01-13 03:38:59,052 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 22:40:06] 2026-01-13 03:38:59,052 | INFO     | ***************************************
[2026-01-12 22:40:06] 2026-01-13 03:38:59,052 | INFO     | 
[2026-01-12 22:40:06] 2026-01-13 03:38:59,064 | INFO     | architecture information:
[2026-01-12 22:40:06] 2026-01-13 03:38:59,083 | INFO     | executing command: cat /etc/os-release
[2026-01-12 22:40:06] 2026-01-13 03:38:59,227 | INFO     | cat /etc/os-release:
[2026-01-12 22:40:06] NAME="CentOS Linux"
[2026-01-12 22:40:06] VERSION="7 (Core)"
[2026-01-12 22:40:06] ID="centos"
[2026-01-12 22:40:06] ID_LIKE="rhel fedora"
[2026-01-12 22:40:06] VERSION_ID="7"
[2026-01-12 22:40:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 22:40:06] ANSI_COLOR="0;31"
[2026-01-12 22:40:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 22:40:06] HOME_URL="https://www.centos.org/"
[2026-01-12 22:40:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 22:40:06] 
[2026-01-12 22:40:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 22:40:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 22:40:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 22:40:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 22:40:06] 
[2026-01-12 22:40:06] 2026-01-13 03:38:59,227 | INFO     | ***************************************
[2026-01-12 22:40:06] 2026-01-13 03:38:59,742 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-12 22:40:06] 2026-01-13 03:38:59,806 | INFO     | sufficient remaining disk space (81655758848 B)
[2026-01-12 22:40:06] 2026-01-13 03:38:59,806 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 22:40:06] 2026-01-13 03:38:59,806 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 22:40:06] 2026-01-13 03:38:59,806 | INFO     | update_server=False
[2026-01-12 22:40:06] 2026-01-13 03:38:59,806 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 22:40:06] 2026-01-13 03:38:59,808 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 22:40:06] 2026-01-13 03:38:59,815 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 22:40:06] 2026-01-13 03:39:00,313 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 22:40:06] 2026-01-13 03:39:00,390 | INFO     | all data control threads have been joined
[2026-01-12 22:40:06] 2026-01-13 03:39:00,425 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 22:40:06] 2026-01-13 03:39:00,426 | INFO     | aborting loop
[2026-01-12 22:40:06] 2026-01-13 03:39:00,813 | INFO     | [job] retrieve thread has finished
[2026-01-12 22:40:06] 2026-01-13 03:39:01,238 | INFO     | all payload control threads have been joined
[2026-01-12 22:40:06] 2026-01-13 03:39:01,349 | INFO     | [job] queue monitor thread has finished
[2026-01-12 22:40:06] 2026-01-13 03:39:01,408 | INFO     | all job control threads have been joined
[2026-01-12 22:40:06] 2026-01-13 03:39:01,440 | INFO     | [data] copytool_in thread has finished
[2026-01-12 22:40:06] 2026-01-13 03:39:01,440 | INFO     | [job] job monitor thread has finished
[2026-01-12 22:40:06] 2026-01-13 03:39:01,489 | INFO     | [job] validate thread has finished
[2026-01-12 22:40:06] 2026-01-13 03:39:01,518 | INFO     | [data] control thread has finished
[2026-01-12 22:40:06] 2026-01-13 03:39:01,581 | INFO     | [payload] validate_post thread has finished
[2026-01-12 22:40:06] 2026-01-13 03:39:01,628 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 22:40:06] 2026-01-13 03:39:01,825 | INFO     | [data] copytool_out thread has finished
[2026-01-12 22:40:06] 2026-01-13 03:39:01,830 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 22:40:06] 2026-01-13 03:39:01,985 | INFO     | [payload] failed_post thread has finished
[2026-01-12 22:40:06] 2026-01-13 03:39:02,160 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 22:40:06] 2026-01-13 03:39:02,226 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 22:40:06] 2026-01-13 03:39:02,245 | INFO     | [payload] control thread has finished
[2026-01-12 22:40:06] 2026-01-13 03:39:02,445 | INFO     | [job] control thread has finished
[2026-01-12 22:40:06] 2026-01-13 03:39:03,818 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 22:40:06] 2026-01-13 03:39:25,547 | INFO     | 67795s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-12 22:40:06] 2026-01-13 03:39:28,789 | INFO     | PID=3909431 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 22:40:06] 2026-01-13 03:39:28,790 | INFO     | .. there are 12 such processes running
[2026-01-12 22:40:06] 2026-01-13 03:39:28,790 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 22:40:06] 2026-01-13 03:39:28,790 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 22:40:06] 2026-01-13 03:39:28,790 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 22:40:06] 2026-01-13 03:39:59,160 | INFO     | [monitor] cgroup control has ended
[2026-01-12 22:40:06] 2026-01-13 03:39:59,791 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140216799123264)>', '<ExcThread(monitor, started 140216429954816)>']
[2026-01-12 22:40:06] 2026-01-13 03:39:59,985 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 22:40:06] 2026-01-13 03:39:59,986 | INFO     | [monitor] control thread has ended
[2026-01-12 22:40:06] 2026-01-13 03:40:04,817 | INFO     | all workflow threads have been joined
[2026-01-12 22:40:06] 2026-01-13 03:40:04,818 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 22:40:06] 2026-01-13 03:40:04,818 | INFO     | traces error code: 0
[2026-01-12 22:40:06] 2026-01-13 03:40:04,818 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 22:40:06] 2026-01-13 03:40:05,693 [wrapper] ==== pilot stdout END ====
[2026-01-12 22:40:06] 2026-01-13 03:40:05,699 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 22:40:06] 2026-01-13 03:40:05,708 [wrapper] pilotpid: 3909431
[2026-01-12 22:40:06] 2026-01-13 03:40:05,717 [wrapper] Pilot exit status: 0
[2026-01-12 22:40:06] 2026-01-13 03:40:05,753 [wrapper] pandaids: 6966840796
[2026-01-12 22:40:06] 2026-01-13 03:40:05,851 [wrapper] cleanup supervisor_pilot 1804265 3909432
[2026-01-12 22:40:06] 2026-01-13 03:40:05,871 [wrapper] Test setup, not cleaning
[2026-01-12 22:40:06] 2026-01-13 03:40:05,895 [wrapper] apfmon messages muted
[2026-01-12 22:40:06] 2026-01-13 03:40:05,922 [wrapper] ==== wrapper stdout END ====
[2026-01-12 22:40:06] 2026-01-13 03:40:05,959 [wrapper] ==== wrapper stderr END ====
[2026-01-12 22:40:06]  *** Error codes and diagnostics ***
[2026-01-12 22:40:06]     "exeErrorCode": 0,
[2026-01-12 22:40:06]     "exeErrorDiag": "",
[2026-01-12 22:40:06]     "pilotErrorCode": 0,
[2026-01-12 22:40:06]     "pilotErrorDiag": "",
[2026-01-12 22:40:06]  *** Listing of results directory ***
[2026-01-12 22:40:06] total 1499148
[2026-01-12 22:40:06] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 03:42 pilot3.tar.gz
[2026-01-12 22:40:06] -rwx------. 1 boincer umatlas      36322 Jan 12 03:47 runpilot2-wrapper.sh
[2026-01-12 22:40:06] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 03:47 queuedata.json
[2026-01-12 22:40:06] -rw-r--r--. 1 boincer umatlas        100 Jan 12 03:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 22:40:06] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 03:48 run_atlas
[2026-01-12 22:40:06] -rw-r--r--. 1 boincer umatlas        105 Jan 12 03:48 job.xml
[2026-01-12 22:40:06] -rw-r--r--. 2 boincer umatlas  323293525 Jan 12 03:48 EVNT.48118027._000037.pool.root.1
[2026-01-12 22:40:06] -rw-r--r--. 2 boincer umatlas     592609 Jan 12 03:48 input.tar.gz
[2026-01-12 22:40:06] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 03:48 start_atlas.sh
[2026-01-12 22:40:06] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 03:48 shared
[2026-01-12 22:40:06] -rw-r--r--. 1 boincer umatlas          0 Jan 12 03:48 boinc_lockfile
[2026-01-12 22:40:06] -rw-r--r--. 1 boincer umatlas       2894 Jan 12 03:48 pandaJob.out
[2026-01-12 22:40:06] -rw-------. 1 boincer umatlas         57 Jan 12 03:48 setup.sh.local
[2026-01-12 22:40:06] -rw-------. 1 boincer umatlas     987688 Jan 12 03:48 agis_schedconf.cvmfs.json
[2026-01-12 22:40:06] drwx------. 5 boincer umatlas       4096 Jan 12 03:49 pilot3
[2026-01-12 22:40:06] -rw-r--r--. 1 boincer umatlas        533 Jan 12 21:02 boinc_task_state.xml
[2026-01-12 22:40:06] -rw-------. 1 boincer umatlas 1184235083 Jan 12 22:33 HITS.48187943._000177.pool.root.1
[2026-01-12 22:40:06] -rw-------. 1 boincer umatlas       1046 Jan 12 22:38 memory_monitor_summary.json
[2026-01-12 22:40:06] -rw-------. 1 boincer umatlas    1516240 Jan 12 22:38 agis_ddmendpoints.agis.ALL.json
[2026-01-12 22:40:06] -rw-------. 1 boincer umatlas    2720894 Jan 12 22:38 log.48187943._000177.job.log.tgz.1
[2026-01-12 22:40:06] -rw-------. 1 boincer umatlas         95 Jan 12 22:38 pilot_heartbeat.json
[2026-01-12 22:40:06] -rw-------. 1 boincer umatlas      27990 Jan 12 22:38 heartbeat.json
[2026-01-12 22:40:06] -rw-r--r--. 1 boincer umatlas       6908 Jan 12 22:39 init_data.xml
[2026-01-12 22:40:06] -rw-------. 1 boincer umatlas       4940 Jan 12 22:40 pilotlog.txt
[2026-01-12 22:40:06] -rw-r--r--. 1 boincer umatlas       8192 Jan 12 22:40 boinc_mmap_file
[2026-01-12 22:40:06] -rw-------. 1 boincer umatlas    9102578 Jan 12 22:40 log.48187943._000177.job.log.1
[2026-01-12 22:40:06] -rw-------. 1 boincer umatlas        353 Jan 12 22:40 output.list
[2026-01-12 22:40:06] -rw-r--r--. 1 boincer umatlas         29 Jan 12 22:40 wrapper_checkpoint.txt
[2026-01-12 22:40:06] -rw-r--r--. 1 boincer umatlas        620 Jan 12 22:40 runtime_log
[2026-01-12 22:40:06] -rw-------. 1 boincer umatlas   11857920 Jan 12 22:40 result.tar.gz
[2026-01-12 22:40:06] -rw-r--r--. 1 boincer umatlas       9343 Jan 12 22:40 runtime_log.err
[2026-01-12 22:40:06] -rw-------. 1 boincer umatlas        661 Jan 12 22:40 robKDm2kSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmb9mKDmXP83mn.diag
[2026-01-12 22:40:06] -rw-r--r--. 1 boincer umatlas      16440 Jan 12 22:40 stderr.txt
[2026-01-12 22:40:06] HITS file was successfully produced:
[2026-01-12 22:40:06] -rw-------. 1 boincer umatlas 1184235083 Jan 12 22:33 shared/HITS.pool.root.1
[2026-01-12 22:40:06]  *** Contents of shared directory: ***
[2026-01-12 22:40:06] total 1484384
[2026-01-12 22:40:06] -rw-r--r--. 2 boincer umatlas  323293525 Jan 12 03:48 ATLAS.root_0
[2026-01-12 22:40:06] -rw-r--r--. 2 boincer umatlas     592609 Jan 12 03:48 input.tar.gz
[2026-01-12 22:40:06] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 03:48 start_atlas.sh
[2026-01-12 22:40:06] -rw-------. 1 boincer umatlas 1184235083 Jan 12 22:33 HITS.pool.root.1
[2026-01-12 22:40:06] -rw-------. 1 boincer umatlas   11857920 Jan 12 22:40 result.tar.gz
22:40:08 (3905470): run_atlas exited; CPU time 239990.175860
22:40:08 (3905470): called boinc_finish(0)

</stderr_txt>
]]>

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