Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:47:52 (3340526): wrapper (7.7.26015): starting
03:47:52 (3340526): wrapper: running run_atlas (--nthreads 10)
[2026-01-12 03:47:52] Arguments: --nthreads 10
[2026-01-12 03:47:52] Threads: 10
[2026-01-12 03:47:52] Checking for CVMFS
[2026-01-12 03:47:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 03:47:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 03:47:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 03:47:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 03:47:53] 2.13.3.0 13071 34176 253740 155045 1 340 29783868 32935937 17063 16776704 0 30340404 99.748 26301736 14353 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 03:47:53] CVMFS is ok
[2026-01-12 03:47:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 03:47:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 03:47:53] Further information can be found at the LHC@home message board.
[2026-01-12 03:47:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 03:47:53] Checking for apptainer binary...
[2026-01-12 03:47:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 03:47:53] Running /usr/bin/apptainer --version
[2026-01-12 03:47:53] apptainer version 1.4.5-2.el9
[2026-01-12 03:47:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 03:47:53] c6-12-25-1.aglt2.org
[2026-01-12 03:47:53] apptainer works
[2026-01-12 03:47:53] Set ATHENA_PROC_NUMBER=10
[2026-01-12 03:47:53] Set ATHENA_CORE_NUMBER=10
[2026-01-12 03:47:53] Starting ATLAS job with PandaID=6966839975
[2026-01-12 03:47:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:00:08 (3340526): BOINC client no longer exists - exiting
18:00:08 (3340526): timer handler: client dead, exiting
18:13:24 (1102246): wrapper (7.7.26015): starting
18:13:24 (1102246): wrapper: running run_atlas (--nthreads 8)
[2026-01-13 18:13:24] Arguments: --nthreads 8
[2026-01-13 18:13:24] Threads: 8
[2026-01-13 18:13:24] This job has been restarted, cleaning up previous attempt
[2026-01-13 18:13:25] Checking for CVMFS
[2026-01-13 18:13:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-13 18:13:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-13 18:13:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-13 18:13:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-13 18:13:26] 2.13.3.0 13071 36482 323872 155107 1 557 25726621 32935937 18243 16776704 0 35177927 99.739 30379800 14066 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-13 18:13:26] CVMFS is ok
[2026-01-13 18:13:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-13 18:13:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-13 18:13:26] Further information can be found at the LHC@home message board.
[2026-01-13 18:13:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-13 18:13:26] Checking for apptainer binary...
[2026-01-13 18:13:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-13 18:13:26] Running /usr/bin/apptainer --version
[2026-01-13 18:13:26] apptainer version 1.4.5-2.el9
[2026-01-13 18:13:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-13 18:13:26] c6-12-25-1.aglt2.org
[2026-01-13 18:13:26] apptainer works
[2026-01-13 18:13:26] Set ATHENA_PROC_NUMBER=8
[2026-01-13 18:13:26] Set ATHENA_CORE_NUMBER=8
[2026-01-13 18:13:26] Starting ATLAS job with PandaID=6966839975
[2026-01-13 18:13:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-16 13:48:30]  *** The last 200 lines of the pilot log: ***
[2026-01-16 13:48:30] 2026-01-16 18:47:17,639 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 13:48:30] 2026-01-16 18:47:18,966 | INFO     | time since job start (243205s) is within the limit (349056.0s)
[2026-01-16 13:48:30] 2026-01-16 18:47:20,176 | INFO     | monitor loop #7179: job 0:6966839975 is in state 'finished'
[2026-01-16 13:48:30] 2026-01-16 18:47:20,176 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 13:48:30] 2026-01-16 18:47:20,985 | INFO     | time since job start (243207s) is within the limit (349056.0s)
[2026-01-16 13:48:30] 2026-01-16 18:47:21,793 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-16 13:48:30] 2026-01-16 18:47:21,962 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 999.9978958333335
[2026-01-16 13:48:30] 2026-01-16 18:47:22,305 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966839975/memory_monitor_summary.json (trf name=prmon)
[2026-01-16 13:48:30] 2026-01-16 18:47:22,306 | INFO     | extracted standard info from prmon json
[2026-01-16 13:48:30] 2026-01-16 18:47:22,327 | INFO     | extracted standard memory fields from prmon json
[2026-01-16 13:48:30] 2026-01-16 18:47:22,327 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-16 13:48:30] 2026-01-16 18:47:22,717 | INFO     | monitor loop #7180: job 0:6966839975 is in state 'finished'
[2026-01-16 13:48:30] 2026-01-16 18:47:22,717 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 13:48:30] 2026-01-16 18:47:23,018 | INFO     | time since job start (243210s) is within the limit (349056.0s)
[2026-01-16 13:48:30] 2026-01-16 18:47:23,355 | INFO     | fitting pss+swap vs Time
[2026-01-16 13:48:30] 2026-01-16 18:47:23,420 | INFO     | sum of square deviations: 19622427220105.184
[2026-01-16 13:48:30] 2026-01-16 18:47:25,061 | INFO     | time since job start (243212s) is within the limit (349056.0s)
[2026-01-16 13:48:30] 2026-01-16 18:47:25,264 | INFO     | monitor loop #7181: job 0:6966839975 is in state 'finished'
[2026-01-16 13:48:30] 2026-01-16 18:47:25,264 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 13:48:30] 2026-01-16 18:47:26,991 | INFO     | sum of deviations: 35199537425124.74
[2026-01-16 13:48:30] 2026-01-16 18:47:26,993 | INFO     | mean x: 1768467611.8401506
[2026-01-16 13:48:30] 2026-01-16 18:47:26,993 | INFO     | mean y: 3515421.662233375
[2026-01-16 13:48:30] 2026-01-16 18:47:26,994 | INFO     | intersect: -3168836356.73079
[2026-01-16 13:48:30] 2026-01-16 18:47:27,006 | INFO     | chi2: 32.94700379553564
[2026-01-16 13:48:30] 2026-01-16 18:47:27,020 | INFO     | sum of square deviations: 19548662602410.61
[2026-01-16 13:48:30] 2026-01-16 18:47:27,081 | INFO     | time since job start (243214s) is within the limit (349056.0s)
[2026-01-16 13:48:30] 2026-01-16 18:47:27,792 | INFO     | monitor loop #7182: job 0:6966839975 is in state 'finished'
[2026-01-16 13:48:30] 2026-01-16 18:47:27,792 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 13:48:30] 2026-01-16 18:47:27,902 | INFO     | sum of deviations: 37037333969927.36
[2026-01-16 13:48:30] 2026-01-16 18:47:27,902 | INFO     | mean x: 1768467459.34598
[2026-01-16 13:48:30] 2026-01-16 18:47:27,903 | INFO     | mean y: 3519220.706281407
[2026-01-16 13:48:30] 2026-01-16 18:47:27,903 | INFO     | intersect: -3347058833.6036367
[2026-01-16 13:48:30] 2026-01-16 18:47:27,915 | INFO     | chi2: 28.923217219430533
[2026-01-16 13:48:30] 2026-01-16 18:47:27,916 | INFO     | current chi2=28.923217219430533 (change=12.21290591726079 %)
[2026-01-16 13:48:30] 2026-01-16 18:47:27,916 | INFO     | right removable region: 3979
[2026-01-16 13:48:30] 2026-01-16 18:47:27,929 | INFO     | sum of square deviations: 19548651079562.883
[2026-01-16 13:48:30] 2026-01-16 18:47:29,097 | INFO     | sum of deviations: 33341974458177.973
[2026-01-16 13:48:30] 2026-01-16 18:47:29,098 | INFO     | mean x: 1768467764.3462312
[2026-01-16 13:48:30] 2026-01-16 18:47:29,098 | INFO     | mean y: 3519261.313567839
[2026-01-16 13:48:30] 2026-01-16 18:47:29,098 | INFO     | intersect: -3012760828.2414203
[2026-01-16 13:48:30] 2026-01-16 18:47:29,109 | INFO     | time since job start (243216s) is within the limit (349056.0s)
[2026-01-16 13:48:30] 2026-01-16 18:47:29,123 | INFO     | chi2: 29.295354381291787
[2026-01-16 13:48:30] 2026-01-16 18:47:29,124 | INFO     | current chi2=29.295354381291787 (change=11.083403628765351 %)
[2026-01-16 13:48:30] 2026-01-16 18:47:29,124 | INFO     | left removable region: 10
[2026-01-16 13:48:30] 2026-01-16 18:47:29,138 | INFO     | sum of square deviations: 19387008740973.547
[2026-01-16 13:48:30] 2026-01-16 18:47:30,326 | INFO     | monitor loop #7183: job 0:6966839975 is in state 'finished'
[2026-01-16 13:48:30] 2026-01-16 18:47:30,326 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-16 13:48:30] 2026-01-16 18:47:31,147 | INFO     | time since job start (243218s) is within the limit (349056.0s)
[2026-01-16 13:48:30] 2026-01-16 18:47:31,319 | INFO     | sum of deviations: 34266937207974.89
[2026-01-16 13:48:30] 2026-01-16 18:47:31,319 | INFO     | mean x: 1768467733.8594105
[2026-01-16 13:48:30] 2026-01-16 18:47:31,320 | INFO     | mean y: 3526294.379692618
[2026-01-16 13:48:30] 2026-01-16 18:47:31,320 | INFO     | intersect: -3122276845.2462173
[2026-01-16 13:48:30] 2026-01-16 18:47:31,347 | INFO     | chi2: 23.165362129145866
[2026-01-16 13:48:30] 2026-01-16 18:47:31,352 | INFO     | current memory leak: 1.77 B/s (using 3969 data points, chi2=23.17)
[2026-01-16 13:48:30] 2026-01-16 18:47:31,363 | INFO     | could have reported an average CPU frequency of 999 MHz (133 samples)
[2026-01-16 13:48:30] 2026-01-16 18:47:31,368 | INFO     | ..............................
[2026-01-16 13:48:30] 2026-01-16 18:47:31,368 | INFO     | . Timing measurements:
[2026-01-16 13:48:30] 2026-01-16 18:47:31,368 | INFO     | . get job = 0 s
[2026-01-16 13:48:30] 2026-01-16 18:47:31,369 | INFO     | . initial setup = 3 s
[2026-01-16 13:48:30] 2026-01-16 18:47:31,369 | INFO     | . payload setup = 25 s
[2026-01-16 13:48:30] 2026-01-16 18:47:31,369 | INFO     | . stage-in = 0 s
[2026-01-16 13:48:30] 2026-01-16 18:47:31,369 | INFO     | . payload execution = 243046 s
[2026-01-16 13:48:30] 2026-01-16 18:47:31,369 | INFO     | . stage-out = 48 s
[2026-01-16 13:48:30] 2026-01-16 18:47:31,370 | INFO     | . log creation = 15 s
[2026-01-16 13:48:30] 2026-01-16 18:47:31,370 | INFO     | ..............................
[2026-01-16 13:48:30] 2026-01-16 18:47:32,574 | INFO     | 
[2026-01-16 13:48:30] 2026-01-16 18:47:32,574 | INFO     | job summary report
[2026-01-16 13:48:30] 2026-01-16 18:47:32,575 | INFO     | --------------------------------------------------
[2026-01-16 13:48:30] 2026-01-16 18:47:32,575 | INFO     | PanDA job id: 6966839975
[2026-01-16 13:48:30] 2026-01-16 18:47:32,575 | INFO     | task id: 48187943
[2026-01-16 13:48:30] 2026-01-16 18:47:32,575 | INFO     | errors: (none)
[2026-01-16 13:48:30] 2026-01-16 18:47:32,575 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-16 13:48:30] 2026-01-16 18:47:32,576 | INFO     | pilot state: finished 
[2026-01-16 13:48:30] 2026-01-16 18:47:32,576 | INFO     | transexitcode: 0
[2026-01-16 13:48:30] 2026-01-16 18:47:32,576 | INFO     | exeerrorcode: 0
[2026-01-16 13:48:30] 2026-01-16 18:47:32,576 | INFO     | exeerrordiag: 
[2026-01-16 13:48:30] 2026-01-16 18:47:32,576 | INFO     | exitcode: 0
[2026-01-16 13:48:30] 2026-01-16 18:47:32,577 | INFO     | exitmsg: OK
[2026-01-16 13:48:30] 2026-01-16 18:47:32,577 | INFO     | cpuconsumptiontime: 806696 s
[2026-01-16 13:48:30] 2026-01-16 18:47:32,577 | INFO     | nevents: 2050
[2026-01-16 13:48:30] 2026-01-16 18:47:32,577 | INFO     | neventsw: 0
[2026-01-16 13:48:30] 2026-01-16 18:47:32,577 | INFO     | pid: 1160720
[2026-01-16 13:48:30] 2026-01-16 18:47:32,636 | INFO     | pgrp: 1160720
[2026-01-16 13:48:30] 2026-01-16 18:47:32,636 | INFO     | corecount: 8
[2026-01-16 13:48:30] 2026-01-16 18:47:32,637 | INFO     | event service: False
[2026-01-16 13:48:30] 2026-01-16 18:47:32,637 | INFO     | sizes: {0: 2284392, 1: 2284476, 2: 2284647, 12: 2284937, 13: 2284965, 243083: 2421377, 243086: 2421504, 243136: 2430558, 243140: 2430614, 243195: 2430860}
[2026-01-16 13:48:30] 2026-01-16 18:47:32,637 | INFO     | --------------------------------------------------
[2026-01-16 13:48:30] 2026-01-16 18:47:32,637 | INFO     | 
[2026-01-16 13:48:30] 2026-01-16 18:47:32,637 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-16 13:48:30] 2026-01-16 18:47:32,916 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-16 13:48:30] 2026-01-16 18:47:32,917 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-16 13:48:30] 2026-01-16 18:47:32,917 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-16 13:48:30] 2026-01-16 18:47:32,918 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-16 13:48:30] 2026-01-16 18:47:32,918 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-16 13:48:30] 2026-01-16 18:47:32,918 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-16 13:48:30] 2026-01-16 18:47:32,918 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-16 13:48:30] 2026-01-16 18:47:32,918 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-16 13:48:30] 2026-01-16 18:47:32,919 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-16 13:48:30] 2026-01-16 18:47:32,919 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-16 13:48:30] 2026-01-16 18:47:32,919 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-16 13:48:30] 2026-01-16 18:47:32,919 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-16 13:48:30] 2026-01-16 18:47:32,932 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-16 13:48:30] 2026-01-16 18:47:32,932 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-16 13:48:30] 2026-01-16 18:47:32,932 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-16 13:48:30] 2026-01-16 18:47:32,933 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-16 13:48:30] 2026-01-16 18:47:32,933 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-16 13:48:30] 2026-01-16 18:47:32,933 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-16 13:48:30] 2026-01-16 18:47:32,933 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-16 13:48:30] 2026-01-16 18:47:32,934 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-16 13:48:30] 2026-01-16 18:47:32,934 | INFO     | job 6966839975 has completed (purged errors)
[2026-01-16 13:48:30] 2026-01-16 18:47:32,935 | INFO     | overall cleanup function is called
[2026-01-16 13:48:30] 2026-01-16 18:47:34,108 | INFO     | --- collectZombieJob: --- 10, [1160720]
[2026-01-16 13:48:30] 2026-01-16 18:47:34,108 | INFO     | zombie collector waiting for pid 1160720
[2026-01-16 13:48:30] 2026-01-16 18:47:34,109 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-16 13:48:30] 2026-01-16 18:47:34,109 | INFO     | collected zombie processes
[2026-01-16 13:48:30] 2026-01-16 18:47:34,109 | INFO     | will attempt to kill all subprocesses of pid=1160720
[2026-01-16 13:48:30] 2026-01-16 18:47:40,942 | INFO     | process IDs to be killed: [1160720] (in reverse order)
[2026-01-16 13:48:30] 2026-01-16 18:47:42,724 | WARNING  | found no corresponding commands to process id(s)
[2026-01-16 13:48:30] 2026-01-16 18:47:42,736 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-16 13:48:30] 2026-01-16 18:47:43,241 | INFO     | did not find any defunct processes belonging to 1160720
[2026-01-16 13:48:30] 2026-01-16 18:47:43,874 | INFO     | did not find any defunct processes belonging to 1160720
[2026-01-16 13:48:30] 2026-01-16 18:47:43,874 | INFO     | ready for new job
[2026-01-16 13:48:30] 2026-01-16 18:47:43,882 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-16 13:48:30] 2026-01-16 18:47:44,051 | INFO     | ***************************************
[2026-01-16 13:48:30] 2026-01-16 18:47:44,051 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-16 13:48:30] 2026-01-16 18:47:44,051 | INFO     | ***************************************
[2026-01-16 13:48:30] 2026-01-16 18:47:44,075 | INFO     | 
[2026-01-16 13:48:30] 2026-01-16 18:47:44,133 | INFO     | architecture information:
[2026-01-16 13:48:30] 2026-01-16 18:47:44,144 | INFO     | executing command: cat /etc/os-release
[2026-01-16 13:48:30] 2026-01-16 18:47:44,347 | INFO     | cat /etc/os-release:
[2026-01-16 13:48:30] NAME="CentOS Linux"
[2026-01-16 13:48:30] VERSION="7 (Core)"
[2026-01-16 13:48:30] ID="centos"
[2026-01-16 13:48:30] ID_LIKE="rhel fedora"
[2026-01-16 13:48:30] VERSION_ID="7"
[2026-01-16 13:48:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-16 13:48:30] ANSI_COLOR="0;31"
[2026-01-16 13:48:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-16 13:48:30] HOME_URL="https://www.centos.org/"
[2026-01-16 13:48:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-16 13:48:30] 
[2026-01-16 13:48:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-16 13:48:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-16 13:48:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-16 13:48:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-16 13:48:30] 
[2026-01-16 13:48:30] 2026-01-16 18:47:44,347 | INFO     | ***************************************
[2026-01-16 13:48:30] 2026-01-16 18:47:44,851 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-16 13:48:30] 2026-01-16 18:47:44,995 | INFO     | sufficient remaining disk space (70851231744 B)
[2026-01-16 13:48:30] 2026-01-16 18:47:44,995 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-16 13:48:30] 2026-01-16 18:47:44,996 | INFO     | current server update state: UPDATING_FINAL
[2026-01-16 13:48:30] 2026-01-16 18:47:44,996 | INFO     | update_server=False
[2026-01-16 13:48:30] 2026-01-16 18:47:44,996 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-16 13:48:30] 2026-01-16 18:47:44,998 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-16 13:48:30] 2026-01-16 18:47:44,998 | INFO     | aborting loop
[2026-01-16 13:48:30] 2026-01-16 18:47:45,215 | INFO     | all payload control threads have been joined
[2026-01-16 13:48:30] 2026-01-16 18:47:45,408 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-16 13:48:30] 2026-01-16 18:47:45,518 | INFO     | all job control threads have been joined
[2026-01-16 13:48:30] 2026-01-16 18:47:45,714 | INFO     | all data control threads have been joined
[2026-01-16 13:48:30] 2026-01-16 18:47:45,960 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-16 13:48:30] 2026-01-16 18:47:46,003 | INFO     | [job] retrieve thread has finished
[2026-01-16 13:48:30] 2026-01-16 18:47:46,005 | INFO     | [job] job monitor thread has finished
[2026-01-16 13:48:30] 2026-01-16 18:47:46,213 | INFO     | [job] create_data_payload thread has finished
[2026-01-16 13:48:30] 2026-01-16 18:47:46,220 | INFO     | [payload] control thread has finished
[2026-01-16 13:48:30] 2026-01-16 18:47:46,356 | INFO     | [payload] failed_post thread has finished
[2026-01-16 13:48:30] 2026-01-16 18:47:46,363 | INFO     | [payload] validate_post thread has finished
[2026-01-16 13:48:30] 2026-01-16 18:47:46,443 | INFO     | [payload] execute_payloads thread has finished
[2026-01-16 13:48:30] 2026-01-16 18:47:46,450 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-16 13:48:30] 2026-01-16 18:47:46,463 | INFO     | [job] validate thread has finished
[2026-01-16 13:48:30] 2026-01-16 18:47:46,470 | INFO     | [payload] validate_pre thread has finished
[2026-01-16 13:48:30] 2026-01-16 18:47:46,476 | INFO     | [data] copytool_in thread has finished
[2026-01-16 13:48:30] 2026-01-16 18:47:46,524 | INFO     | [job] control thread has finished
[2026-01-16 13:48:30] 2026-01-16 18:47:46,720 | INFO     | [data] control thread has finished
[2026-01-16 13:48:30] 2026-01-16 18:47:46,969 | INFO     | [job] queue monitor thread has finished
[2026-01-16 13:48:30] 2026-01-16 18:47:47,418 | INFO     | [data] copytool_out thread has finished
[2026-01-16 13:48:30] 2026-01-16 18:47:47,590 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-16 13:48:30] 2026-01-16 18:47:51,608 | INFO     | [data] queue_monitor thread has finished
[2026-01-16 13:48:30] 2026-01-16 18:48:12,208 | INFO     | PID=1121346 has CPU usage=13.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-16 13:48:30] 2026-01-16 18:48:12,209 | INFO     | .. there are 35 such processes running
[2026-01-16 13:48:30] 2026-01-16 18:48:12,232 | INFO     | found 0 job(s) in 20 queues
[2026-01-16 13:48:30] 2026-01-16 18:48:12,232 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-16 13:48:30] 2026-01-16 18:48:12,232 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-16 13:48:30] 2026-01-16 18:48:21,611 | INFO     | [monitor] cgroup control has ended
[2026-01-16 13:48:30] 2026-01-16 18:48:22,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140483713845056)>', '<ExcThread(monitor, started 140483433039616)>']
[2026-01-16 13:48:30] 2026-01-16 18:48:23,310 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-16 13:48:30] 2026-01-16 18:48:23,310 | INFO     | [monitor] control thread has ended
[2026-01-16 13:48:30] 2026-01-16 18:48:27,438 | INFO     | all workflow threads have been joined
[2026-01-16 13:48:30] 2026-01-16 18:48:27,438 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-16 13:48:30] 2026-01-16 18:48:27,439 | INFO     | traces error code: 0
[2026-01-16 13:48:30] 2026-01-16 18:48:27,440 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-16 13:48:30] 2026-01-16 18:48:28,925 [wrapper] ==== pilot stdout END ====
[2026-01-16 13:48:30] 2026-01-16 18:48:28,952 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-16 13:48:30] 2026-01-16 18:48:28,983 [wrapper] pilotpid: 1121346
[2026-01-16 13:48:30] 2026-01-16 18:48:29,033 [wrapper] Pilot exit status: 0
[2026-01-16 13:48:30] 2026-01-16 18:48:29,183 [wrapper] pandaids: 6966839975 6966839975
[2026-01-16 13:48:30] 2026-01-16 18:48:29,787 [wrapper] cleanup supervisor_pilot 1782087 1121347
[2026-01-16 13:48:30] 2026-01-16 18:48:29,820 [wrapper] Test setup, not cleaning
[2026-01-16 13:48:30] 2026-01-16 18:48:29,865 [wrapper] apfmon messages muted
[2026-01-16 13:48:30] 2026-01-16 18:48:29,902 [wrapper] ==== wrapper stdout END ====
[2026-01-16 13:48:30] 2026-01-16 18:48:29,947 [wrapper] ==== wrapper stderr END ====
[2026-01-16 13:48:30]  *** Error codes and diagnostics ***
[2026-01-16 13:48:30]     "exeErrorCode": 0,
[2026-01-16 13:48:30]     "exeErrorDiag": "",
[2026-01-16 13:48:30]     "pilotErrorCode": 0,
[2026-01-16 13:48:30]     "pilotErrorDiag": "",
[2026-01-16 13:48:30]  *** Listing of results directory ***
[2026-01-16 13:48:31] total 1806828
[2026-01-16 13:48:31] drwx------. 5 boincer umatlas       4096 Dec  3 09:30 pilot3
[2026-01-16 13:48:31] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 03:42 pilot3.tar.gz
[2026-01-16 13:48:31] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 03:45 queuedata.json
[2026-01-16 13:48:31] -rwx------. 1 boincer umatlas      36322 Jan 12 03:46 runpilot2-wrapper.sh
[2026-01-16 13:48:31] -rw-r--r--. 1 boincer umatlas        100 Jan 12 03:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-16 13:48:31] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 03:47 run_atlas
[2026-01-16 13:48:31] -rw-r--r--. 1 boincer umatlas        105 Jan 12 03:47 job.xml
[2026-01-16 13:48:31] -rw-r--r--. 3 boincer umatlas  320005187 Jan 12 03:47 EVNT.48118027._000023.pool.root.1
[2026-01-16 13:48:31] -rw-r--r--. 3 boincer umatlas  320005187 Jan 12 03:47 ATLAS.root_0
[2026-01-16 13:48:31] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 03:47 start_atlas.sh
[2026-01-16 13:48:31] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 03:47 shared
[2026-01-16 13:48:31] -rw-r--r--. 2 boincer umatlas     592609 Jan 12 03:47 input.tar.gz
[2026-01-16 13:48:31] -rw-r--r--. 1 boincer umatlas          0 Jan 12 03:47 boinc_lockfile
[2026-01-16 13:48:31] -rw-r--r--. 1 boincer umatlas       2895 Jan 13 18:13 pandaJob.out
[2026-01-16 13:48:31] -rw-------. 1 boincer umatlas         57 Jan 13 18:13 setup.sh.local
[2026-01-16 13:48:31] -rw-------. 1 boincer umatlas     997226 Jan 13 18:13 agis_schedconf.cvmfs.json
[2026-01-16 13:48:31] -rw-r--r--. 1 boincer umatlas        535 Jan 16 12:57 boinc_task_state.xml
[2026-01-16 13:48:31] -rw-------. 1 boincer umatlas 1158948002 Jan 16 13:42 HITS.48187943._000110.pool.root.1
[2026-01-16 13:48:31] -rw-------. 1 boincer umatlas       1071 Jan 16 13:45 memory_monitor_summary.json
[2026-01-16 13:48:31] -rw-r--r--. 1 boincer umatlas       6861 Jan 16 13:45 init_data.xml
[2026-01-16 13:48:31] -rw-------. 1 boincer umatlas    1516246 Jan 16 13:46 agis_ddmendpoints.agis.ALL.json
[2026-01-16 13:48:31] -rw-------. 1 boincer umatlas    3917084 Jan 16 13:46 log.48187943._000110.job.log.tgz.1
[2026-01-16 13:48:31] -rw-------. 1 boincer umatlas         96 Jan 16 13:47 pilot_heartbeat.json
[2026-01-16 13:48:31] -rw-------. 1 boincer umatlas      28061 Jan 16 13:47 heartbeat.json
[2026-01-16 13:48:31] -rw-------. 1 boincer umatlas       4825 Jan 16 13:48 pilotlog.txt
[2026-01-16 13:48:31] -rw-r--r--. 1 boincer umatlas       8192 Jan 16 13:48 boinc_mmap_file
[2026-01-16 13:48:31] -rw-r--r--. 1 boincer umatlas         31 Jan 16 13:48 wrapper_checkpoint.txt
[2026-01-16 13:48:31] -rw-------. 1 boincer umatlas   19713298 Jan 16 13:48 log.48187943._000110.job.log.1
[2026-01-16 13:48:31] -rw-------. 1 boincer umatlas        353 Jan 16 13:48 output.list
[2026-01-16 13:48:31] -rw-r--r--. 1 boincer umatlas        620 Jan 16 13:48 runtime_log
[2026-01-16 13:48:31] -rw-------. 1 boincer umatlas   23664640 Jan 16 13:48 result.tar.gz
[2026-01-16 13:48:31] -rw-r--r--. 1 boincer umatlas       9439 Jan 16 13:48 runtime_log.err
[2026-01-16 13:48:31] -rw-------. 1 boincer umatlas        798 Jan 16 13:48 j3NKDmEkSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmo8mKDmKUfp2m.diag
[2026-01-16 13:48:31] -rw-r--r--. 1 boincer umatlas      24024 Jan 16 13:48 stderr.txt
[2026-01-16 13:48:31] HITS file was successfully produced:
[2026-01-16 13:48:31] -rw-------. 1 boincer umatlas 1158948002 Jan 16 13:42 shared/HITS.pool.root.1
[2026-01-16 13:48:31]  *** Contents of shared directory: ***
[2026-01-16 13:48:31] total 1468012
[2026-01-16 13:48:31] -rw-r--r--. 3 boincer umatlas  320005187 Jan 12 03:47 ATLAS.root_0
[2026-01-16 13:48:31] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 03:47 start_atlas.sh
[2026-01-16 13:48:31] -rw-r--r--. 2 boincer umatlas     592609 Jan 12 03:47 input.tar.gz
[2026-01-16 13:48:31] -rw-------. 1 boincer umatlas 1158948002 Jan 16 13:42 HITS.pool.root.1
[2026-01-16 13:48:31] -rw-------. 1 boincer umatlas   23664640 Jan 16 13:48 result.tar.gz
13:48:32 (1102246): run_atlas exited; CPU time 820548.072191
13:48:32 (1102246): called boinc_finish(0)

</stderr_txt>
]]>

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