Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:47:20 (2216388): wrapper (7.7.26015): starting
03:47:20 (2216388): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 03:47:20] Arguments: --nthreads 8
[2026-01-12 03:47:20] Threads: 8
[2026-01-12 03:47:20] Checking for CVMFS
[2026-01-12 03:47:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 03:47:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 03:47:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 03:47:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 03:47:21] 2.13.3.0 6825 27008 186028 155045 2 124 38842092 40960000 9242 16776704 0 18968956 99.669 17614922 43616 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 03:47:21] CVMFS is ok
[2026-01-12 03:47:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 03:47:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 03:47:21] Further information can be found at the LHC@home message board.
[2026-01-12 03:47:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 03:47:21] Checking for apptainer binary...
[2026-01-12 03:47:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 03:47:21] Running /usr/bin/apptainer --version
[2026-01-12 03:47:21] apptainer version 1.4.5-2.el9
[2026-01-12 03:47:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 03:47:21] c-210-31-2.aglt2.org
[2026-01-12 03:47:21] apptainer works
[2026-01-12 03:47:21] Set ATHENA_PROC_NUMBER=8
[2026-01-12 03:47:21] Set ATHENA_CORE_NUMBER=8
[2026-01-12 03:47:21] Starting ATLAS job with PandaID=6966845553
[2026-01-12 03:47:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-13 10:21:59]  *** The last 200 lines of the pilot log: ***
[2026-01-13 10:21:59] 2026-01-13 15:21:08,390 | INFO     | extracted standard memory fields from prmon json
[2026-01-13 10:21:59] 2026-01-13 15:21:08,390 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-13 10:21:59] 2026-01-13 15:21:08,418 | INFO     | fitting pss+swap vs Time
[2026-01-13 10:21:59] 2026-01-13 15:21:08,421 | INFO     | sum of square deviations: 1817547947589.78
[2026-01-13 10:21:59] 2026-01-13 15:21:08,476 | INFO     | sum of deviations: 7693924133116.405
[2026-01-13 10:21:59] 2026-01-13 15:21:08,476 | INFO     | mean x: 1768262649.6128674
[2026-01-13 10:21:59] 2026-01-13 15:21:08,476 | INFO     | mean y: 3519690.413200222
[2026-01-13 10:21:59] 2026-01-13 15:21:08,476 | INFO     | intersect: -7481773168.895409
[2026-01-13 10:21:59] 2026-01-13 15:21:08,479 | INFO     | chi2: 12.844158822887271
[2026-01-13 10:21:59] 2026-01-13 15:21:08,481 | INFO     | sum of square deviations: 1802471942884.844
[2026-01-13 10:21:59] 2026-01-13 15:21:08,536 | INFO     | sum of deviations: 8458408480130.837
[2026-01-13 10:21:59] 2026-01-13 15:21:08,536 | INFO     | mean x: 1768262497.125139
[2026-01-13 10:21:59] 2026-01-13 15:21:08,536 | INFO     | mean y: 3527422.7964404896
[2026-01-13 10:21:59] 2026-01-13 15:21:08,536 | INFO     | intersect: -8294347370.662221
[2026-01-13 10:21:59] 2026-01-13 15:21:08,538 | INFO     | chi2: 9.464055563537848
[2026-01-13 10:21:59] 2026-01-13 15:21:08,538 | INFO     | current chi2=9.464055563537848 (change=26.316268009130724 %)
[2026-01-13 10:21:59] 2026-01-13 15:21:08,540 | INFO     | sum of square deviations: 1787479677080.09
[2026-01-13 10:21:59] 2026-01-13 15:21:08,597 | INFO     | sum of deviations: 9315663840785.094
[2026-01-13 10:21:59] 2026-01-13 15:21:08,597 | INFO     | mean x: 1768262344.6380367
[2026-01-13 10:21:59] 2026-01-13 15:21:08,597 | INFO     | mean y: 3536141.7612939207
[2026-01-13 10:21:59] 2026-01-13 15:21:08,597 | INFO     | intersect: -9211974275.607416
[2026-01-13 10:21:59] 2026-01-13 15:21:08,599 | INFO     | chi2: 5.351539998324405
[2026-01-13 10:21:59] 2026-01-13 15:21:08,600 | INFO     | current chi2=5.351539998324405 (change=43.454051358888094 %)
[2026-01-13 10:21:59] 2026-01-13 15:21:08,601 | INFO     | sum of square deviations: 1772570699066.531
[2026-01-13 10:21:59] 2026-01-13 15:21:08,668 | INFO     | sum of deviations: 9809178079231.7
[2026-01-13 10:21:59] 2026-01-13 15:21:08,668 | INFO     | mean x: 1768262192.1504474
[2026-01-13 10:21:59] 2026-01-13 15:21:08,668 | INFO     | mean y: 3541186.9491051454
[2026-01-13 10:21:59] 2026-01-13 15:21:08,668 | INFO     | intersect: -9781794169.609968
[2026-01-13 10:21:59] 2026-01-13 15:21:08,670 | INFO     | chi2: 3.6201940585771837
[2026-01-13 10:21:59] 2026-01-13 15:21:08,670 | INFO     | current chi2=3.6201940585771837 (change=32.352293737677655 %)
[2026-01-13 10:21:59] 2026-01-13 15:21:08,672 | INFO     | sum of square deviations: 1757744449161.7126
[2026-01-13 10:21:59] 2026-01-13 15:21:08,726 | INFO     | sum of deviations: 10006855972934.396
[2026-01-13 10:21:59] 2026-01-13 15:21:08,726 | INFO     | mean x: 1768262039.6606843
[2026-01-13 10:21:59] 2026-01-13 15:21:08,726 | INFO     | mean y: 3543217.5064498037
[2026-01-13 10:21:59] 2026-01-13 15:21:08,726 | INFO     | intersect: -10063189498.805351
[2026-01-13 10:21:59] 2026-01-13 15:21:08,729 | INFO     | chi2: 3.1368238174564698
[2026-01-13 10:21:59] 2026-01-13 15:21:08,729 | INFO     | current chi2=3.1368238174564698 (change=13.352053323646665 %)
[2026-01-13 10:21:59] 2026-01-13 15:21:08,729 | INFO     | right removable region: 1782
[2026-01-13 10:21:59] 2026-01-13 15:21:08,731 | INFO     | sum of square deviations: 1802467088992.8445
[2026-01-13 10:21:59] 2026-01-13 15:21:08,787 | INFO     | sum of deviations: 7048957689636.987
[2026-01-13 10:21:59] 2026-01-13 15:21:08,787 | INFO     | mean x: 1768262802.125139
[2026-01-13 10:21:59] 2026-01-13 15:21:08,787 | INFO     | mean y: 3526208.5378198
[2026-01-13 10:21:59] 2026-01-13 15:21:08,787 | INFO     | intersect: -6911667834.369072
[2026-01-13 10:21:59] 2026-01-13 15:21:08,789 | INFO     | chi2: 10.343111029045371
[2026-01-13 10:21:59] 2026-01-13 15:21:08,789 | INFO     | current chi2=10.343111029045371 (change=19.472258388655487 %)
[2026-01-13 10:21:59] 2026-01-13 15:21:08,790 | INFO     | left removable region: 10
[2026-01-13 10:21:59] 2026-01-13 15:21:08,791 | INFO     | sum of square deviations: 1725410434508.7585
[2026-01-13 10:21:59] 2026-01-13 15:21:08,800 | INFO     | time since job start (110015s) is within the limit (349056.0s)
[2026-01-13 10:21:59] 2026-01-13 15:21:08,860 | INFO     | sum of deviations: 9200541546489.947
[2026-01-13 10:21:59] 2026-01-13 15:21:08,861 | INFO     | mean x: 1768262314.1828442
[2026-01-13 10:21:59] 2026-01-13 15:21:08,861 | INFO     | mean y: 3551357.4909706544
[2026-01-13 10:21:59] 2026-01-13 15:21:08,861 | INFO     | intersect: -9425492631.896782
[2026-01-13 10:21:59] 2026-01-13 15:21:08,864 | INFO     | chi2: 0.5608519819070883
[2026-01-13 10:21:59] 2026-01-13 15:21:08,864 | INFO     | current memory leak: 5.33 B/s (using 1772 data points, chi2=0.56)
[2026-01-13 10:21:59] 2026-01-13 15:21:08,866 | INFO     | could have reported an average CPU frequency of 3000 MHz (63 samples)
[2026-01-13 10:21:59] 2026-01-13 15:21:08,866 | INFO     | ..............................
[2026-01-13 10:21:59] 2026-01-13 15:21:08,866 | INFO     | . Timing measurements:
[2026-01-13 10:21:59] 2026-01-13 15:21:08,866 | INFO     | . get job = 0 s
[2026-01-13 10:21:59] 2026-01-13 15:21:08,866 | INFO     | . initial setup = 2 s
[2026-01-13 10:21:59] 2026-01-13 15:21:08,866 | INFO     | . payload setup = 10 s
[2026-01-13 10:21:59] 2026-01-13 15:21:08,867 | INFO     | . stage-in = 0 s
[2026-01-13 10:21:59] 2026-01-13 15:21:08,867 | INFO     | . payload execution = 109970 s
[2026-01-13 10:21:59] 2026-01-13 15:21:08,867 | INFO     | . stage-out = 4 s
[2026-01-13 10:21:59] 2026-01-13 15:21:08,867 | INFO     | . log creation = 1 s
[2026-01-13 10:21:59] 2026-01-13 15:21:08,867 | INFO     | ..............................
[2026-01-13 10:21:59] 2026-01-13 15:21:08,985 | INFO     | 
[2026-01-13 10:21:59] 2026-01-13 15:21:08,985 | INFO     | job summary report
[2026-01-13 10:21:59] 2026-01-13 15:21:08,986 | INFO     | --------------------------------------------------
[2026-01-13 10:21:59] 2026-01-13 15:21:08,986 | INFO     | PanDA job id: 6966845553
[2026-01-13 10:21:59] 2026-01-13 15:21:08,986 | INFO     | task id: 48187943
[2026-01-13 10:21:59] 2026-01-13 15:21:08,986 | INFO     | errors: (none)
[2026-01-13 10:21:59] 2026-01-13 15:21:08,986 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-13 10:21:59] 2026-01-13 15:21:08,986 | INFO     | pilot state: finished 
[2026-01-13 10:21:59] 2026-01-13 15:21:08,986 | INFO     | transexitcode: 0
[2026-01-13 10:21:59] 2026-01-13 15:21:08,986 | INFO     | exeerrorcode: 0
[2026-01-13 10:21:59] 2026-01-13 15:21:08,986 | INFO     | exeerrordiag: 
[2026-01-13 10:21:59] 2026-01-13 15:21:08,986 | INFO     | exitcode: 0
[2026-01-13 10:21:59] 2026-01-13 15:21:08,986 | INFO     | exitmsg: OK
[2026-01-13 10:21:59] 2026-01-13 15:21:08,986 | INFO     | cpuconsumptiontime: 294202 s
[2026-01-13 10:21:59] 2026-01-13 15:21:08,986 | INFO     | nevents: 2050
[2026-01-13 10:21:59] 2026-01-13 15:21:08,987 | INFO     | neventsw: 0
[2026-01-13 10:21:59] 2026-01-13 15:21:08,987 | INFO     | pid: 2234506
[2026-01-13 10:21:59] 2026-01-13 15:21:08,987 | INFO     | pgrp: 2234506
[2026-01-13 10:21:59] 2026-01-13 15:21:08,987 | INFO     | corecount: 8
[2026-01-13 10:21:59] 2026-01-13 15:21:08,987 | INFO     | event service: False
[2026-01-13 10:21:59] 2026-01-13 15:21:08,987 | INFO     | sizes: {0: 2286981, 4: 2287275, 11: 2287303, 109985: 2382610, 109990: 2390496, 109992: 2390552, 110000: 2390926}
[2026-01-13 10:21:59] 2026-01-13 15:21:08,987 | INFO     | --------------------------------------------------
[2026-01-13 10:21:59] 2026-01-13 15:21:08,987 | INFO     | 
[2026-01-13 10:21:59] 2026-01-13 15:21:08,987 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-13 10:21:59] 2026-01-13 15:21:09,010 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-13 10:21:59] 2026-01-13 15:21:09,010 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-13 10:21:59] 2026-01-13 15:21:09,010 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-13 10:21:59] 2026-01-13 15:21:09,010 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-13 10:21:59] 2026-01-13 15:21:09,010 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-13 10:21:59] 2026-01-13 15:21:09,010 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-13 10:21:59] 2026-01-13 15:21:09,010 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-13 10:21:59] 2026-01-13 15:21:09,011 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-13 10:21:59] 2026-01-13 15:21:09,011 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-13 10:21:59] 2026-01-13 15:21:09,011 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-13 10:21:59] 2026-01-13 15:21:09,011 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-13 10:21:59] 2026-01-13 15:21:09,011 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-13 10:21:59] 2026-01-13 15:21:09,011 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-13 10:21:59] 2026-01-13 15:21:09,011 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-13 10:21:59] 2026-01-13 15:21:09,011 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-13 10:21:59] 2026-01-13 15:21:09,011 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-13 10:21:59] 2026-01-13 15:21:09,011 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-13 10:21:59] 2026-01-13 15:21:09,011 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-13 10:21:59] 2026-01-13 15:21:09,011 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-13 10:21:59] 2026-01-13 15:21:09,012 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-13 10:21:59] 2026-01-13 15:21:09,012 | INFO     | job 6966845553 has completed (purged errors)
[2026-01-13 10:21:59] 2026-01-13 15:21:09,012 | INFO     | overall cleanup function is called
[2026-01-13 10:21:59] 2026-01-13 15:21:10,048 | INFO     | --- collectZombieJob: --- 10, [2234506]
[2026-01-13 10:21:59] 2026-01-13 15:21:10,048 | INFO     | zombie collector waiting for pid 2234506
[2026-01-13 10:21:59] 2026-01-13 15:21:10,049 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-13 10:21:59] 2026-01-13 15:21:10,049 | INFO     | collected zombie processes
[2026-01-13 10:21:59] 2026-01-13 15:21:10,049 | INFO     | will attempt to kill all subprocesses of pid=2234506
[2026-01-13 10:21:59] 2026-01-13 15:21:10,316 | INFO     | process IDs to be killed: [2234506] (in reverse order)
[2026-01-13 10:21:59] 2026-01-13 15:21:10,462 | WARNING  | found no corresponding commands to process id(s)
[2026-01-13 10:21:59] 2026-01-13 15:21:10,462 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-13 10:21:59] 2026-01-13 15:21:10,476 | INFO     | did not find any defunct processes belonging to 2234506
[2026-01-13 10:21:59] 2026-01-13 15:21:10,497 | INFO     | did not find any defunct processes belonging to 2234506
[2026-01-13 10:21:59] 2026-01-13 15:21:10,497 | INFO     | ready for new job
[2026-01-13 10:21:59] 2026-01-13 15:21:10,497 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-13 10:21:59] 2026-01-13 15:21:10,504 | INFO     | ***************************************
[2026-01-13 10:21:59] 2026-01-13 15:21:10,505 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-13 10:21:59] 2026-01-13 15:21:10,505 | INFO     | ***************************************
[2026-01-13 10:21:59] 2026-01-13 15:21:10,505 | INFO     | 
[2026-01-13 10:21:59] 2026-01-13 15:21:10,508 | INFO     | architecture information:
[2026-01-13 10:21:59] 2026-01-13 15:21:10,509 | INFO     | executing command: cat /etc/os-release
[2026-01-13 10:21:59] 2026-01-13 15:21:10,540 | INFO     | cat /etc/os-release:
[2026-01-13 10:21:59] NAME="CentOS Linux"
[2026-01-13 10:21:59] VERSION="7 (Core)"
[2026-01-13 10:21:59] ID="centos"
[2026-01-13 10:21:59] ID_LIKE="rhel fedora"
[2026-01-13 10:21:59] VERSION_ID="7"
[2026-01-13 10:21:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-13 10:21:59] ANSI_COLOR="0;31"
[2026-01-13 10:21:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-13 10:21:59] HOME_URL="https://www.centos.org/"
[2026-01-13 10:21:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-13 10:21:59] 
[2026-01-13 10:21:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-13 10:21:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-13 10:21:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-13 10:21:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-13 10:21:59] 
[2026-01-13 10:21:59] 2026-01-13 15:21:10,540 | INFO     | ***************************************
[2026-01-13 10:21:59] 2026-01-13 15:21:11,043 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-13 10:21:59] 2026-01-13 15:21:11,065 | INFO     | sufficient remaining disk space (69666340864 B)
[2026-01-13 10:21:59] 2026-01-13 15:21:11,065 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-13 10:21:59] 2026-01-13 15:21:11,066 | INFO     | current server update state: UPDATING_FINAL
[2026-01-13 10:21:59] 2026-01-13 15:21:11,066 | INFO     | update_server=False
[2026-01-13 10:21:59] 2026-01-13 15:21:11,066 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-13 10:21:59] 2026-01-13 15:21:11,071 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-13 10:21:59] 2026-01-13 15:21:11,072 | INFO     | aborting loop
[2026-01-13 10:21:59] 2026-01-13 15:21:11,220 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-13 10:21:59] 2026-01-13 15:21:11,243 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-13 10:21:59] 2026-01-13 15:21:11,638 | INFO     | all data control threads have been joined
[2026-01-13 10:21:59] 2026-01-13 15:21:11,828 | INFO     | all payload control threads have been joined
[2026-01-13 10:21:59] 2026-01-13 15:21:12,071 | INFO     | [job] retrieve thread has finished
[2026-01-13 10:21:59] 2026-01-13 15:21:12,077 | INFO     | [job] job monitor thread has finished
[2026-01-13 10:21:59] 2026-01-13 15:21:12,086 | INFO     | all job control threads have been joined
[2026-01-13 10:21:59] 2026-01-13 15:21:12,162 | INFO     | [payload] validate_pre thread has finished
[2026-01-13 10:21:59] 2026-01-13 15:21:12,165 | INFO     | [job] create_data_payload thread has finished
[2026-01-13 10:21:59] 2026-01-13 15:21:12,170 | INFO     | [job] validate thread has finished
[2026-01-13 10:21:59] 2026-01-13 15:21:12,189 | INFO     | [data] copytool_in thread has finished
[2026-01-13 10:21:59] 2026-01-13 15:21:12,235 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-13 10:21:59] 2026-01-13 15:21:12,325 | INFO     | [payload] failed_post thread has finished
[2026-01-13 10:21:59] 2026-01-13 15:21:12,515 | INFO     | [payload] validate_post thread has finished
[2026-01-13 10:21:59] 2026-01-13 15:21:12,644 | INFO     | [data] control thread has finished
[2026-01-13 10:21:59] 2026-01-13 15:21:12,717 | INFO     | [payload] execute_payloads thread has finished
[2026-01-13 10:21:59] 2026-01-13 15:21:12,836 | INFO     | [payload] control thread has finished
[2026-01-13 10:21:59] 2026-01-13 15:21:13,092 | INFO     | [job] control thread has finished
[2026-01-13 10:21:59] 2026-01-13 15:21:13,250 | INFO     | [data] copytool_out thread has finished
[2026-01-13 10:21:59] 2026-01-13 15:21:14,000 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-13 10:21:59] 2026-01-13 15:21:15,006 | INFO     | [job] queue monitor thread has finished
[2026-01-13 10:21:59] 2026-01-13 15:21:15,228 | INFO     | [data] queue_monitor thread has finished
[2026-01-13 10:21:59] 2026-01-13 15:21:42,312 | INFO     | PID=2220296 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-13 10:21:59] 2026-01-13 15:21:42,312 | INFO     | .. there are 11 such processes running
[2026-01-13 10:21:59] 2026-01-13 15:21:42,313 | INFO     | found 0 job(s) in 20 queues
[2026-01-13 10:21:59] 2026-01-13 15:21:42,313 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-13 10:21:59] 2026-01-13 15:21:42,313 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-13 10:21:59] 2026-01-13 15:21:52,096 | INFO     | [monitor] cgroup control has ended
[2026-01-13 10:21:59] 2026-01-13 15:21:53,798 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139963022743360)>', '<ExcThread(monitor, started 139962548729600)>']
[2026-01-13 10:21:59] 2026-01-13 15:21:54,381 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-13 10:21:59] 2026-01-13 15:21:54,382 | INFO     | [monitor] control thread has ended
[2026-01-13 10:21:59] 2026-01-13 15:21:58,824 | INFO     | all workflow threads have been joined
[2026-01-13 10:21:59] 2026-01-13 15:21:58,826 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-13 10:21:59] 2026-01-13 15:21:58,826 | INFO     | traces error code: 0
[2026-01-13 10:21:59] 2026-01-13 15:21:58,826 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-13 10:21:59] 2026-01-13 15:21:59,003 [wrapper] ==== pilot stdout END ====
[2026-01-13 10:21:59] 2026-01-13 15:21:59,006 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-13 10:21:59] 2026-01-13 15:21:59,012 [wrapper] pilotpid: 2220296
[2026-01-13 10:21:59] 2026-01-13 15:21:59,018 [wrapper] Pilot exit status: 0
[2026-01-13 10:21:59] 2026-01-13 15:21:59,034 [wrapper] pandaids: 6966845553
[2026-01-13 10:21:59] 2026-01-13 15:21:59,093 [wrapper] cleanup supervisor_pilot 1165441 2220297
[2026-01-13 10:21:59] 2026-01-13 15:21:59,097 [wrapper] Test setup, not cleaning
[2026-01-13 10:21:59] 2026-01-13 15:21:59,100 [wrapper] apfmon messages muted
[2026-01-13 10:21:59] 2026-01-13 15:21:59,103 [wrapper] ==== wrapper stdout END ====
[2026-01-13 10:21:59] 2026-01-13 15:21:59,106 [wrapper] ==== wrapper stderr END ====
[2026-01-13 10:21:59]  *** Error codes and diagnostics ***
[2026-01-13 10:21:59]     "exeErrorCode": 0,
[2026-01-13 10:21:59]     "exeErrorDiag": "",
[2026-01-13 10:21:59]     "pilotErrorCode": 0,
[2026-01-13 10:21:59]     "pilotErrorDiag": "",
[2026-01-13 10:21:59]  *** Listing of results directory ***
[2026-01-13 10:21:59] total 1837244
[2026-01-13 10:21:59] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 03:42 pilot3.tar.gz
[2026-01-13 10:21:59] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 03:45 queuedata.json
[2026-01-13 10:21:59] -rwx------. 1 boincer umatlas      36322 Jan 12 03:45 runpilot2-wrapper.sh
[2026-01-13 10:21:59] -rw-r--r--. 1 boincer umatlas        100 Jan 12 03:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-13 10:21:59] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 03:47 run_atlas
[2026-01-13 10:21:59] -rw-r--r--. 1 boincer umatlas        105 Jan 12 03:47 job.xml
[2026-01-13 10:21:59] -rw-r--r--. 2 boincer umatlas  321979370 Jan 12 03:47 EVNT.48118027._000072.pool.root.1
[2026-01-13 10:21:59] -rw-r--r--. 2 boincer umatlas  320916856 Jan 12 03:47 EVNT.48118027._000073.pool.root.1
[2026-01-13 10:21:59] -rw-r--r--. 2 boincer umatlas      15897 Jan 12 03:47 start_atlas.sh
[2026-01-13 10:21:59] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 03:47 shared
[2026-01-13 10:21:59] -rw-r--r--. 2 boincer umatlas     592709 Jan 12 03:47 input.tar.gz
[2026-01-13 10:21:59] -rw-r--r--. 1 boincer umatlas          0 Jan 12 03:47 boinc_lockfile
[2026-01-13 10:21:59] -rw-r--r--. 1 boincer umatlas       3434 Jan 12 03:47 pandaJob.out
[2026-01-13 10:21:59] -rw-------. 1 boincer umatlas         57 Jan 12 03:47 setup.sh.local
[2026-01-13 10:21:59] -rw-------. 1 boincer umatlas     987688 Jan 12 03:47 agis_schedconf.cvmfs.json
[2026-01-13 10:21:59] drwx------. 5 boincer umatlas       4096 Jan 12 03:47 pilot3
[2026-01-13 10:21:59] -rw-r--r--. 1 boincer umatlas        534 Jan 13 10:01 boinc_task_state.xml
[2026-01-13 10:21:59] -rw-r--r--. 1 boincer umatlas       6845 Jan 13 10:12 init_data.xml
[2026-01-13 10:21:59] -rw-------. 1 boincer umatlas 1200659706 Jan 13 10:20 HITS.48187943._000352.pool.root.1
[2026-01-13 10:21:59] -rw-------. 1 boincer umatlas       1055 Jan 13 10:20 memory_monitor_summary.json
[2026-01-13 10:21:59] -rw-------. 1 boincer umatlas    1516246 Jan 13 10:20 agis_ddmendpoints.agis.ALL.json
[2026-01-13 10:21:59] -rw-------. 1 boincer umatlas    3067257 Jan 13 10:20 log.48187943._000352.job.log.tgz.1
[2026-01-13 10:21:59] -rw-------. 1 boincer umatlas      27924 Jan 13 10:21 heartbeat.json
[2026-01-13 10:21:59] -rw-------. 1 boincer umatlas         95 Jan 13 10:21 pilot_heartbeat.json
[2026-01-13 10:21:59] -rw-r--r--. 1 boincer umatlas       8192 Jan 13 10:21 boinc_mmap_file
[2026-01-13 10:21:59] -rw-r--r--. 1 boincer umatlas         30 Jan 13 10:21 wrapper_checkpoint.txt
[2026-01-13 10:21:59] -rw-------. 1 boincer umatlas       4824 Jan 13 10:21 pilotlog.txt
[2026-01-13 10:21:59] -rw-------. 1 boincer umatlas   13842971 Jan 13 10:21 log.48187943._000352.job.log.1
[2026-01-13 10:21:59] -rw-------. 1 boincer umatlas        353 Jan 13 10:21 output.list
[2026-01-13 10:21:59] -rw-r--r--. 1 boincer umatlas        620 Jan 13 10:21 runtime_log
[2026-01-13 10:21:59] -rw-------. 1 boincer umatlas   16947200 Jan 13 10:21 result.tar.gz
[2026-01-13 10:21:59] -rw-r--r--. 1 boincer umatlas       9406 Jan 13 10:21 runtime_log.err
[2026-01-13 10:21:59] -rw-------. 1 boincer umatlas        666 Jan 13 10:21 i2pMDmtjSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm27mKDm6fRB6m.diag
[2026-01-13 10:21:59] -rw-r--r--. 1 boincer umatlas      21022 Jan 13 10:21 stderr.txt
[2026-01-13 10:21:59] HITS file was successfully produced:
[2026-01-13 10:21:59] -rw-------. 1 boincer umatlas 1200659706 Jan 13 10:20 shared/HITS.pool.root.1
[2026-01-13 10:21:59]  *** Contents of shared directory: ***
[2026-01-13 10:21:59] total 1817512
[2026-01-13 10:21:59] -rw-r--r--. 2 boincer umatlas  321979370 Jan 12 03:47 ATLAS.root_0
[2026-01-13 10:21:59] -rw-r--r--. 2 boincer umatlas  320916856 Jan 12 03:47 ATLAS.root_1
[2026-01-13 10:21:59] -rw-r--r--. 2 boincer umatlas      15897 Jan 12 03:47 start_atlas.sh
[2026-01-13 10:21:59] -rw-r--r--. 2 boincer umatlas     592709 Jan 12 03:47 input.tar.gz
[2026-01-13 10:21:59] -rw-------. 1 boincer umatlas 1200659706 Jan 13 10:20 HITS.pool.root.1
[2026-01-13 10:21:59] -rw-------. 1 boincer umatlas   16947200 Jan 13 10:21 result.tar.gz
10:22:00 (2216388): run_atlas exited; CPU time 295785.432486
10:22:00 (2216388): called boinc_finish(0)

</stderr_txt>
]]>

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