Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:46:07 (2490237): wrapper (7.7.26015): starting
03:46:07 (2490237): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 03:46:07] Arguments: --nthreads 8
[2026-01-12 03:46:07] Threads: 8
[2026-01-12 03:46:07] Checking for CVMFS
[2026-01-12 03:46:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 03:46:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 03:46:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 03:46:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 03:46:08] 2.13.3.0 12210 26376 169772 155045 0 361 25992206 40960000 25861 16776704 0 89102564 99.768 52315165 47291 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-12 03:46:08] CVMFS is ok
[2026-01-12 03:46:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 03:46:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 03:46:08] Further information can be found at the LHC@home message board.
[2026-01-12 03:46:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 03:46:08] Checking for apptainer binary...
[2026-01-12 03:46:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 03:46:08] Running /usr/bin/apptainer --version
[2026-01-12 03:46:08] apptainer version 1.4.5-2.el9
[2026-01-12 03:46:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 03:46:08] c-208-37.aglt2.org
[2026-01-12 03:46:08] apptainer works
[2026-01-12 03:46:08] Set ATHENA_PROC_NUMBER=8
[2026-01-12 03:46:08] Set ATHENA_CORE_NUMBER=8
[2026-01-12 03:46:08] Starting ATLAS job with PandaID=6966839749
[2026-01-12 03:46:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 13:13:25]  *** The last 200 lines of the pilot log: ***
[2026-01-12 13:13:25] 2026-01-12 18:12:46,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 13:13:25] 2026-01-12 18:12:47,978 | INFO     | time since job start (33988s) is within the limit (349056.0s)
[2026-01-12 13:13:25] 2026-01-12 18:12:48,417 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-12 13:13:25] 2026-01-12 18:12:48,422 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3796.2959296875024
[2026-01-12 13:13:25] 2026-01-12 18:12:48,434 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966839749/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 13:13:25] 2026-01-12 18:12:48,434 | INFO     | extracted standard info from prmon json
[2026-01-12 13:13:25] 2026-01-12 18:12:48,434 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 13:13:25] 2026-01-12 18:12:48,434 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 13:13:25] 2026-01-12 18:12:48,439 | INFO     | fitting pss+swap vs Time
[2026-01-12 13:13:25] 2026-01-12 18:12:48,440 | INFO     | sum of square deviations: 53592464155.45777
[2026-01-12 13:13:25] 2026-01-12 18:12:48,443 | INFO     | sum of deviations: 765944781417.1921
[2026-01-12 13:13:25] 2026-01-12 18:12:48,443 | INFO     | mean x: 1768224577.1615798
[2026-01-12 13:13:25] 2026-01-12 18:12:48,443 | INFO     | mean y: 3400805.0089766607
[2026-01-12 13:13:25] 2026-01-12 18:12:48,443 | INFO     | intersect: -25268107206.301735
[2026-01-12 13:13:25] 2026-01-12 18:12:48,444 | INFO     | chi2: 5.613352962883849
[2026-01-12 13:13:25] 2026-01-12 18:12:48,444 | INFO     | sum of square deviations: 52162804612.78071
[2026-01-12 13:13:25] 2026-01-12 18:12:48,448 | INFO     | sum of deviations: 962171414403.5206
[2026-01-12 13:13:25] 2026-01-12 18:12:48,448 | INFO     | mean x: 1768224424.6865942
[2026-01-12 13:13:25] 2026-01-12 18:12:48,448 | INFO     | mean y: 3421700.1648550723
[2026-01-12 13:13:25] 2026-01-12 18:12:48,448 | INFO     | intersect: -32612443346.069603
[2026-01-12 13:13:25] 2026-01-12 18:12:48,448 | INFO     | chi2: 2.764403798820139
[2026-01-12 13:13:25] 2026-01-12 18:12:48,448 | INFO     | current chi2=2.764403798820139 (change=50.753073660275724 %)
[2026-01-12 13:13:25] 2026-01-12 18:12:48,448 | INFO     | sum of square deviations: 50758583687.279465
[2026-01-12 13:13:25] 2026-01-12 18:12:48,452 | INFO     | sum of deviations: 945218502919.8914
[2026-01-12 13:13:25] 2026-01-12 18:12:48,452 | INFO     | mean x: 1768224272.1992688
[2026-01-12 13:13:25] 2026-01-12 18:12:48,452 | INFO     | mean y: 3419859.2303473493
[2026-01-12 13:13:25] 2026-01-12 18:12:48,452 | INFO     | intersect: -32924179336.443504
[2026-01-12 13:13:25] 2026-01-12 18:12:48,452 | INFO     | chi2: 2.762170170715501
[2026-01-12 13:13:25] 2026-01-12 18:12:48,452 | INFO     | current chi2=2.762170170715501 (change=0.08079963229653103 %)
[2026-01-12 13:13:25] 2026-01-12 18:12:48,452 | INFO     | right removable region: 546
[2026-01-12 13:13:25] 2026-01-12 18:12:48,453 | INFO     | sum of square deviations: 52161831598.40577
[2026-01-12 13:13:25] 2026-01-12 18:12:48,456 | INFO     | sum of deviations: 572034597034.5588
[2026-01-12 13:13:25] 2026-01-12 18:12:48,456 | INFO     | mean x: 1768224729.6884058
[2026-01-12 13:13:25] 2026-01-12 18:12:48,456 | INFO     | mean y: 3421432.259057971
[2026-01-12 13:13:25] 2026-01-12 18:12:48,457 | INFO     | intersect: -19387878484.148846
[2026-01-12 13:13:25] 2026-01-12 18:12:48,457 | INFO     | chi2: 2.986497505694494
[2026-01-12 13:13:25] 2026-01-12 18:12:48,457 | INFO     | current chi2=2.986497505694494 (change=46.796548775009036 %)
[2026-01-12 13:13:25] 2026-01-12 18:12:48,457 | INFO     | sum of square deviations: 50757176533.27954
[2026-01-12 13:13:25] 2026-01-12 18:12:48,461 | INFO     | sum of deviations: 535591087569.4061
[2026-01-12 13:13:25] 2026-01-12 18:12:48,461 | INFO     | mean x: 1768224882.1992688
[2026-01-12 13:13:25] 2026-01-12 18:12:48,461 | INFO     | mean y: 3425386.0146252285
[2026-01-12 13:13:25] 2026-01-12 18:12:48,461 | INFO     | intersect: -18654930976.72454
[2026-01-12 13:13:25] 2026-01-12 18:12:48,461 | INFO     | chi2: 2.962075077552062
[2026-01-12 13:13:25] 2026-01-12 18:12:48,461 | INFO     | current chi2=2.962075077552062 (change=0.8177615449490345 %)
[2026-01-12 13:13:25] 2026-01-12 18:12:48,461 | INFO     | left removable region: 20
[2026-01-12 13:13:25] 2026-01-12 18:12:48,462 | INFO     | sum of square deviations: 45133960587.29467
[2026-01-12 13:13:25] 2026-01-12 18:12:48,465 | INFO     | sum of deviations: 662024814859.3785
[2026-01-12 13:13:25] 2026-01-12 18:12:48,465 | INFO     | mean x: 1768224851.7623575
[2026-01-12 13:13:25] 2026-01-12 18:12:48,465 | INFO     | mean y: 3450837.211026616
[2026-01-12 13:13:25] 2026-01-12 18:12:48,465 | INFO     | intersect: -25932866624.9719
[2026-01-12 13:13:25] 2026-01-12 18:12:48,465 | INFO     | chi2: 0.06367699407428729
[2026-01-12 13:13:25] 2026-01-12 18:12:48,465 | INFO     | current memory leak: 14.67 B/s (using 526 data points, chi2=0.06)
[2026-01-12 13:13:25] 2026-01-12 18:12:48,466 | INFO     | could have reported an average CPU frequency of 3791 MHz (22 samples)
[2026-01-12 13:13:25] 2026-01-12 18:12:48,466 | INFO     | ..............................
[2026-01-12 13:13:25] 2026-01-12 18:12:48,466 | INFO     | . Timing measurements:
[2026-01-12 13:13:25] 2026-01-12 18:12:48,466 | INFO     | . get job = 0 s
[2026-01-12 13:13:25] 2026-01-12 18:12:48,466 | INFO     | . initial setup = 2 s
[2026-01-12 13:13:25] 2026-01-12 18:12:48,466 | INFO     | . payload setup = 12 s
[2026-01-12 13:13:25] 2026-01-12 18:12:48,466 | INFO     | . stage-in = 0 s
[2026-01-12 13:13:25] 2026-01-12 18:12:48,466 | INFO     | . payload execution = 33925 s
[2026-01-12 13:13:25] 2026-01-12 18:12:48,466 | INFO     | . stage-out = 5 s
[2026-01-12 13:13:25] 2026-01-12 18:12:48,466 | INFO     | . log creation = 1 s
[2026-01-12 13:13:25] 2026-01-12 18:12:48,466 | INFO     | ..............................
[2026-01-12 13:13:25] 2026-01-12 18:12:48,812 | INFO     | 
[2026-01-12 13:13:25] 2026-01-12 18:12:48,812 | INFO     | job summary report
[2026-01-12 13:13:25] 2026-01-12 18:12:48,812 | INFO     | --------------------------------------------------
[2026-01-12 13:13:25] 2026-01-12 18:12:48,812 | INFO     | PanDA job id: 6966839749
[2026-01-12 13:13:25] 2026-01-12 18:12:48,812 | INFO     | task id: 48187943
[2026-01-12 13:13:25] 2026-01-12 18:12:48,812 | INFO     | errors: (none)
[2026-01-12 13:13:25] 2026-01-12 18:12:48,812 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 13:13:25] 2026-01-12 18:12:48,812 | INFO     | pilot state: finished 
[2026-01-12 13:13:25] 2026-01-12 18:12:48,812 | INFO     | transexitcode: 0
[2026-01-12 13:13:25] 2026-01-12 18:12:48,812 | INFO     | exeerrorcode: 0
[2026-01-12 13:13:25] 2026-01-12 18:12:48,813 | INFO     | exeerrordiag: 
[2026-01-12 13:13:25] 2026-01-12 18:12:48,813 | INFO     | exitcode: 0
[2026-01-12 13:13:25] 2026-01-12 18:12:48,813 | INFO     | exitmsg: OK
[2026-01-12 13:13:25] 2026-01-12 18:12:48,813 | INFO     | cpuconsumptiontime: 168172 s
[2026-01-12 13:13:25] 2026-01-12 18:12:48,813 | INFO     | nevents: 2050
[2026-01-12 13:13:25] 2026-01-12 18:12:48,813 | INFO     | neventsw: 0
[2026-01-12 13:13:25] 2026-01-12 18:12:48,813 | INFO     | pid: 2513569
[2026-01-12 13:13:25] 2026-01-12 18:12:48,813 | INFO     | pgrp: 2513569
[2026-01-12 13:13:25] 2026-01-12 18:12:48,813 | INFO     | corecount: 8
[2026-01-12 13:13:25] 2026-01-12 18:12:48,813 | INFO     | event service: False
[2026-01-12 13:13:25] 2026-01-12 18:12:48,813 | INFO     | sizes: {0: 2284444, 1: 2284643, 5: 2284905, 11: 2284961, 33942: 2344859, 33948: 2353857, 33950: 2354041, 33973: 2354287}
[2026-01-12 13:13:25] 2026-01-12 18:12:48,813 | INFO     | --------------------------------------------------
[2026-01-12 13:13:25] 2026-01-12 18:12:48,813 | INFO     | 
[2026-01-12 13:13:25] 2026-01-12 18:12:48,813 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-12 13:13:25] 2026-01-12 18:12:48,872 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 13:13:25] 2026-01-12 18:12:48,872 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 13:13:25] 2026-01-12 18:12:48,872 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 13:13:25] 2026-01-12 18:12:48,872 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 13:13:25] 2026-01-12 18:12:48,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 13:13:25] 2026-01-12 18:12:48,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 13:13:25] 2026-01-12 18:12:48,873 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 13:13:25] 2026-01-12 18:12:48,873 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 13:13:25] 2026-01-12 18:12:48,873 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 13:13:25] 2026-01-12 18:12:48,873 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 13:13:25] 2026-01-12 18:12:48,873 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 13:13:25] 2026-01-12 18:12:48,873 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 13:13:25] 2026-01-12 18:12:48,873 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 13:13:25] 2026-01-12 18:12:48,873 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 13:13:25] 2026-01-12 18:12:48,873 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 13:13:25] 2026-01-12 18:12:48,873 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 13:13:25] 2026-01-12 18:12:48,873 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 13:13:25] 2026-01-12 18:12:48,873 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 13:13:25] 2026-01-12 18:12:48,873 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 13:13:25] 2026-01-12 18:12:48,873 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 13:13:25] 2026-01-12 18:12:48,873 | INFO     | job 6966839749 has completed (purged errors)
[2026-01-12 13:13:25] 2026-01-12 18:12:48,873 | INFO     | overall cleanup function is called
[2026-01-12 13:13:25] 2026-01-12 18:12:49,889 | INFO     | --- collectZombieJob: --- 10, [2513569]
[2026-01-12 13:13:25] 2026-01-12 18:12:49,889 | INFO     | zombie collector waiting for pid 2513569
[2026-01-12 13:13:25] 2026-01-12 18:12:49,889 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 13:13:25] 2026-01-12 18:12:49,889 | INFO     | collected zombie processes
[2026-01-12 13:13:25] 2026-01-12 18:12:49,889 | INFO     | will attempt to kill all subprocesses of pid=2513569
[2026-01-12 13:13:25] 2026-01-12 18:12:50,185 | INFO     | PID=2494405 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 13:13:25] 2026-01-12 18:12:50,190 | INFO     | .. there are 25 such processes running
[2026-01-12 13:13:25] 2026-01-12 18:12:51,412 | INFO     | process IDs to be killed: [2513569] (in reverse order)
[2026-01-12 13:13:25] 2026-01-12 18:12:51,911 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 13:13:25] 2026-01-12 18:12:51,911 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 13:13:25] 2026-01-12 18:12:51,949 | INFO     | did not find any defunct processes belonging to 2513569
[2026-01-12 13:13:25] 2026-01-12 18:12:51,974 | INFO     | did not find any defunct processes belonging to 2513569
[2026-01-12 13:13:25] 2026-01-12 18:12:51,974 | INFO     | ready for new job
[2026-01-12 13:13:25] 2026-01-12 18:12:51,974 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 13:13:25] 2026-01-12 18:12:51,977 | INFO     | ***************************************
[2026-01-12 13:13:25] 2026-01-12 18:12:51,977 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 13:13:25] 2026-01-12 18:12:51,977 | INFO     | ***************************************
[2026-01-12 13:13:25] 2026-01-12 18:12:51,977 | INFO     | 
[2026-01-12 13:13:25] 2026-01-12 18:12:51,982 | INFO     | architecture information:
[2026-01-12 13:13:25] 2026-01-12 18:12:51,989 | INFO     | executing command: cat /etc/os-release
[2026-01-12 13:13:25] 2026-01-12 18:12:52,007 | INFO     | cat /etc/os-release:
[2026-01-12 13:13:25] NAME="CentOS Linux"
[2026-01-12 13:13:25] VERSION="7 (Core)"
[2026-01-12 13:13:25] ID="centos"
[2026-01-12 13:13:25] ID_LIKE="rhel fedora"
[2026-01-12 13:13:25] VERSION_ID="7"
[2026-01-12 13:13:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 13:13:25] ANSI_COLOR="0;31"
[2026-01-12 13:13:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 13:13:25] HOME_URL="https://www.centos.org/"
[2026-01-12 13:13:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 13:13:25] 
[2026-01-12 13:13:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 13:13:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 13:13:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 13:13:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 13:13:25] 
[2026-01-12 13:13:25] 2026-01-12 18:12:52,007 | INFO     | ***************************************
[2026-01-12 13:13:25] 2026-01-12 18:12:52,511 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-12 13:13:25] 2026-01-12 18:12:52,541 | INFO     | sufficient remaining disk space (165930860544 B)
[2026-01-12 13:13:25] 2026-01-12 18:12:52,541 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 13:13:25] 2026-01-12 18:12:52,542 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 13:13:25] 2026-01-12 18:12:52,542 | INFO     | update_server=False
[2026-01-12 13:13:25] 2026-01-12 18:12:52,542 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 13:13:25] 2026-01-12 18:12:52,542 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 13:13:25] 2026-01-12 18:12:52,549 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 13:13:25] 2026-01-12 18:12:52,549 | INFO     | aborting loop
[2026-01-12 13:13:25] 2026-01-12 18:12:52,817 | INFO     | all data control threads have been joined
[2026-01-12 13:13:25] 2026-01-12 18:12:53,548 | INFO     | [job] retrieve thread has finished
[2026-01-12 13:13:25] 2026-01-12 18:12:53,549 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 13:13:25] 2026-01-12 18:12:53,555 | INFO     | [job] job monitor thread has finished
[2026-01-12 13:13:25] 2026-01-12 18:12:53,685 | INFO     | [payload] failed_post thread has finished
[2026-01-12 13:13:25] 2026-01-12 18:12:53,812 | INFO     | [data] copytool_in thread has finished
[2026-01-12 13:13:25] 2026-01-12 18:12:53,823 | INFO     | [data] control thread has finished
[2026-01-12 13:13:25] 2026-01-12 18:12:53,877 | INFO     | all job control threads have been joined
[2026-01-12 13:13:25] 2026-01-12 18:12:53,955 | INFO     | all payload control threads have been joined
[2026-01-12 13:13:25] 2026-01-12 18:12:54,163 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 13:13:25] 2026-01-12 18:12:54,253 | INFO     | [job] validate thread has finished
[2026-01-12 13:13:25] 2026-01-12 18:12:54,348 | INFO     | [payload] validate_post thread has finished
[2026-01-12 13:13:25] 2026-01-12 18:12:54,430 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 13:13:25] 2026-01-12 18:12:54,549 | INFO     | [data] copytool_out thread has finished
[2026-01-12 13:13:25] 2026-01-12 18:12:54,555 | INFO     | [job] queue monitor thread has finished
[2026-01-12 13:13:25] 2026-01-12 18:12:54,566 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 13:13:25] 2026-01-12 18:12:54,667 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 13:13:25] 2026-01-12 18:12:54,858 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 13:13:25] 2026-01-12 18:12:54,883 | INFO     | [job] control thread has finished
[2026-01-12 13:13:25] 2026-01-12 18:12:54,961 | INFO     | [payload] control thread has finished
[2026-01-12 13:13:25] 2026-01-12 18:12:58,575 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 13:13:25] 2026-01-12 18:13:18,623 | INFO     | [monitor] cgroup control has ended
[2026-01-12 13:13:25] 2026-01-12 18:13:19,439 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139928790128448)>', '<ExcThread(monitor, started 139928331601664)>']
[2026-01-12 13:13:25] 2026-01-12 18:13:23,739 | INFO     | PID=2494405 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 13:13:25] 2026-01-12 18:13:23,749 | INFO     | .. there are 25 such processes running
[2026-01-12 13:13:25] 2026-01-12 18:13:23,749 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 13:13:25] 2026-01-12 18:13:23,750 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 13:13:25] 2026-01-12 18:13:23,750 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 13:13:25] 2026-01-12 18:13:23,750 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 13:13:25] 2026-01-12 18:13:23,750 | INFO     | [monitor] control thread has ended
[2026-01-12 13:13:25] 2026-01-12 18:13:24,465 | INFO     | all workflow threads have been joined
[2026-01-12 13:13:25] 2026-01-12 18:13:24,465 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 13:13:25] 2026-01-12 18:13:24,465 | INFO     | traces error code: 0
[2026-01-12 13:13:25] 2026-01-12 18:13:24,465 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 13:13:25] 2026-01-12 18:13:24,573 [wrapper] ==== pilot stdout END ====
[2026-01-12 13:13:25] 2026-01-12 18:13:24,574 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 13:13:25] 2026-01-12 18:13:24,576 [wrapper] pilotpid: 2494405
[2026-01-12 13:13:25] 2026-01-12 18:13:24,578 [wrapper] Pilot exit status: 0
[2026-01-12 13:13:25] 2026-01-12 18:13:24,601 [wrapper] pandaids: 6966839749
[2026-01-12 13:13:25] 2026-01-12 18:13:24,731 [wrapper] cleanup supervisor_pilot 1323408 2494406
[2026-01-12 13:13:25] 2026-01-12 18:13:24,741 [wrapper] Test setup, not cleaning
[2026-01-12 13:13:25] 2026-01-12 18:13:24,744 [wrapper] apfmon messages muted
[2026-01-12 13:13:25] 2026-01-12 18:13:24,750 [wrapper] ==== wrapper stdout END ====
[2026-01-12 13:13:25] 2026-01-12 18:13:24,756 [wrapper] ==== wrapper stderr END ====
[2026-01-12 13:13:25]  *** Error codes and diagnostics ***
[2026-01-12 13:13:25]     "exeErrorCode": 0,
[2026-01-12 13:13:25]     "exeErrorDiag": "",
[2026-01-12 13:13:25]     "pilotErrorCode": 0,
[2026-01-12 13:13:25]     "pilotErrorDiag": "",
[2026-01-12 13:13:25]  *** Listing of results directory ***
[2026-01-12 13:13:25] total 1505860
[2026-01-12 13:13:25] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 03:42 pilot3.tar.gz
[2026-01-12 13:13:25] -rwx------. 1 boincer umatlas      36322 Jan 12 03:45 runpilot2-wrapper.sh
[2026-01-12 13:13:25] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 03:45 queuedata.json
[2026-01-12 13:13:25] -rw-r--r--. 1 boincer umatlas        100 Jan 12 03:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 13:13:25] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 03:46 run_atlas
[2026-01-12 13:13:25] -rw-r--r--. 1 boincer umatlas        105 Jan 12 03:46 job.xml
[2026-01-12 13:13:25] -rw-r--r--. 2 boincer umatlas  321967006 Jan 12 03:46 EVNT.48118027._000010.pool.root.1
[2026-01-12 13:13:25] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 03:46 start_atlas.sh
[2026-01-12 13:13:25] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 03:46 shared
[2026-01-12 13:13:25] -rw-r--r--. 2 boincer umatlas     592603 Jan 12 03:46 input.tar.gz
[2026-01-12 13:13:25] -rw-r--r--. 1 boincer umatlas          0 Jan 12 03:46 boinc_lockfile
[2026-01-12 13:13:25] -rw-r--r--. 1 boincer umatlas       2893 Jan 12 03:46 pandaJob.out
[2026-01-12 13:13:25] -rw-------. 1 boincer umatlas         57 Jan 12 03:46 setup.sh.local
[2026-01-12 13:13:25] -rw-------. 1 boincer umatlas     987688 Jan 12 03:46 agis_schedconf.cvmfs.json
[2026-01-12 13:13:25] drwx------. 5 boincer umatlas       4096 Jan 12 03:46 pilot3
[2026-01-12 13:13:25] -rw-r--r--. 1 boincer umatlas        532 Jan 12 13:07 boinc_task_state.xml
[2026-01-12 13:13:25] -rw-r--r--. 1 boincer umatlas       7185 Jan 12 13:10 init_data.xml
[2026-01-12 13:13:25] -rw-------. 1 boincer umatlas 1202854367 Jan 12 13:11 HITS.48187943._000047.pool.root.1
[2026-01-12 13:13:25] -rw-------. 1 boincer umatlas       1062 Jan 12 13:12 memory_monitor_summary.json
[2026-01-12 13:13:25] -rw-------. 1 boincer umatlas    1516240 Jan 12 13:12 agis_ddmendpoints.agis.ALL.json
[2026-01-12 13:13:25] -rw-------. 1 boincer umatlas    2165395 Jan 12 13:12 log.48187943._000047.job.log.tgz.1
[2026-01-12 13:13:25] -rw-------. 1 boincer umatlas      27501 Jan 12 13:12 heartbeat.json
[2026-01-12 13:13:25] -rw-r--r--. 1 boincer umatlas       8192 Jan 12 13:13 boinc_mmap_file
[2026-01-12 13:13:25] -rw-r--r--. 1 boincer umatlas         29 Jan 12 13:13 wrapper_checkpoint.txt
[2026-01-12 13:13:25] -rw-------. 1 boincer umatlas         95 Jan 12 13:13 pilot_heartbeat.json
[2026-01-12 13:13:25] -rw-------. 1 boincer umatlas       4825 Jan 12 13:13 pilotlog.txt
[2026-01-12 13:13:25] -rw-------. 1 boincer umatlas    4444305 Jan 12 13:13 log.48187943._000047.job.log.1
[2026-01-12 13:13:25] -rw-------. 1 boincer umatlas        353 Jan 12 13:13 output.list
[2026-01-12 13:13:25] -rw-r--r--. 1 boincer umatlas        620 Jan 12 13:13 runtime_log
[2026-01-12 13:13:25] -rw-------. 1 boincer umatlas    6645760 Jan 12 13:13 result.tar.gz
[2026-01-12 13:13:25] -rw-r--r--. 1 boincer umatlas       9343 Jan 12 13:13 runtime_log.err
[2026-01-12 13:13:25] -rw-------. 1 boincer umatlas        665 Jan 12 13:13 enxKDmFjSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmM7mKDmOBYXMm.diag
[2026-01-12 13:13:25] -rw-r--r--. 1 boincer umatlas      21322 Jan 12 13:13 stderr.txt
[2026-01-12 13:13:25] HITS file was successfully produced:
[2026-01-12 13:13:25] -rw-------. 1 boincer umatlas 1202854367 Jan 12 13:11 shared/HITS.pool.root.1
[2026-01-12 13:13:25]  *** Contents of shared directory: ***
[2026-01-12 13:13:25] total 1496184
[2026-01-12 13:13:25] -rw-r--r--. 2 boincer umatlas  321967006 Jan 12 03:46 ATLAS.root_0
[2026-01-12 13:13:25] -rw-r--r--. 2 boincer umatlas      15847 Jan 12 03:46 start_atlas.sh
[2026-01-12 13:13:25] -rw-r--r--. 2 boincer umatlas     592603 Jan 12 03:46 input.tar.gz
[2026-01-12 13:13:25] -rw-------. 1 boincer umatlas 1202854367 Jan 12 13:11 HITS.pool.root.1
[2026-01-12 13:13:25] -rw-------. 1 boincer umatlas    6645760 Jan 12 13:13 result.tar.gz
13:13:27 (2490237): run_atlas exited; CPU time 168738.623025
13:13:27 (2490237): called boinc_finish(0)

</stderr_txt>
]]>

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