Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:46:00 (3976259): wrapper (7.7.26015): starting
03:46:00 (3976259): wrapper: running run_atlas (--nthreads 9)
[2026-01-12 03:46:00] Arguments: --nthreads 9
[2026-01-12 03:46:00] Threads: 9
[2026-01-12 03:46:00] Checking for CVMFS
[2026-01-12 03:46:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 03:46:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 03:46:01] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 03:46:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 03:46:01] 2.13.3.0 10223 97485 179972 155045 3 169 37534297 40959947 26764 16776704 0 1022413635 99.688 847422350 51055 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 03:46:01] CVMFS is ok
[2026-01-12 03:46:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 03:46:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 03:46:01] Further information can be found at the LHC@home message board.
[2026-01-12 03:46:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 03:46:01] Checking for apptainer binary...
[2026-01-12 03:46:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 03:46:01] Running /usr/bin/apptainer --version
[2026-01-12 03:46:01] apptainer version 1.4.5-2.el9
[2026-01-12 03:46:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 03:46:01] c8-7-6.aglt2.org
[2026-01-12 03:46:01] apptainer works
[2026-01-12 03:46:01] Set ATHENA_PROC_NUMBER=9
[2026-01-12 03:46:01] Set ATHENA_CORE_NUMBER=9
[2026-01-12 03:46:01] Starting ATLAS job with PandaID=6966841401
[2026-01-12 03:46:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 14:19:26]  *** The last 200 lines of the pilot log: ***
[2026-01-12 14:19:27] 2026-01-12 19:18:42,639 | INFO     | extracted standard info from prmon json
[2026-01-12 14:19:27] 2026-01-12 19:18:42,639 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 14:19:27] 2026-01-12 19:18:42,639 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 14:19:27] 2026-01-12 19:18:42,652 | INFO     | fitting pss+swap vs Time
[2026-01-12 14:19:27] 2026-01-12 19:18:42,653 | INFO     | sum of square deviations: 74258379107.24669
[2026-01-12 14:19:27] 2026-01-12 19:18:42,660 | INFO     | sum of deviations: 43702163440.63307
[2026-01-12 14:19:27] 2026-01-12 19:18:42,660 | INFO     | mean x: 1768226518.9468598
[2026-01-12 14:19:27] 2026-01-12 19:18:42,661 | INFO     | mean y: 3564814.8373590983
[2026-01-12 14:19:27] 2026-01-12 19:18:42,661 | INFO     | intersect: -1037062859.239306
[2026-01-12 14:19:27] 2026-01-12 19:18:42,665 | INFO     | chi2: 16.545251082006896
[2026-01-12 14:19:27] 2026-01-12 19:18:42,666 | INFO     | sum of square deviations: 72479818803.72592
[2026-01-12 14:19:27] 2026-01-12 19:18:42,674 | INFO     | sum of deviations: 333687219370.07336
[2026-01-12 14:19:27] 2026-01-12 19:18:42,675 | INFO     | mean x: 1768226366.4788961
[2026-01-12 14:19:27] 2026-01-12 19:18:42,675 | INFO     | mean y: 3589683.813311688
[2026-01-12 14:19:27] 2026-01-12 19:18:42,675 | INFO     | intersect: -8137083805.520242
[2026-01-12 14:19:27] 2026-01-12 19:18:42,675 | INFO     | chi2: 12.27113812100685
[2026-01-12 14:19:27] 2026-01-12 19:18:42,675 | INFO     | current chi2=12.27113812100685 (change=25.83286853620603 %)
[2026-01-12 14:19:27] 2026-01-12 19:18:42,675 | INFO     | sum of square deviations: 70729910198.91989
[2026-01-12 14:19:27] 2026-01-12 19:18:42,685 | INFO     | sum of deviations: 632356980160.529
[2026-01-12 14:19:27] 2026-01-12 19:18:42,685 | INFO     | mean x: 1768226214.0114567
[2026-01-12 14:19:27] 2026-01-12 19:18:42,685 | INFO     | mean y: 3615712.06710311
[2026-01-12 14:19:27] 2026-01-12 19:18:42,686 | INFO     | intersect: -15805116206.131279
[2026-01-12 14:19:27] 2026-01-12 19:18:42,686 | INFO     | chi2: 7.964711503588331
[2026-01-12 14:19:27] 2026-01-12 19:18:42,687 | INFO     | current chi2=7.964711503588331 (change=35.093946257897514 %)
[2026-01-12 14:19:27] 2026-01-12 19:18:42,688 | INFO     | sum of square deviations: 69008420730.297
[2026-01-12 14:19:27] 2026-01-12 19:18:42,696 | INFO     | sum of deviations: 954727123410.4956
[2026-01-12 14:19:27] 2026-01-12 19:18:42,697 | INFO     | mean x: 1768226061.5445545
[2026-01-12 14:19:27] 2026-01-12 19:18:42,697 | INFO     | mean y: 3644265.574257426
[2026-01-12 14:19:27] 2026-01-12 19:18:42,697 | INFO     | intersect: -24459651132.47183
[2026-01-12 14:19:27] 2026-01-12 19:18:42,698 | INFO     | chi2: 3.2627613286829047
[2026-01-12 14:19:27] 2026-01-12 19:18:42,698 | INFO     | current chi2=3.2627613286829047 (change=59.034783278553945 %)
[2026-01-12 14:19:27] 2026-01-12 19:18:42,699 | INFO     | sum of square deviations: 67314674794.96181
[2026-01-12 14:19:27] 2026-01-12 19:18:42,715 | INFO     | sum of deviations: 990890680412.1725
[2026-01-12 14:19:27] 2026-01-12 19:18:42,715 | INFO     | mean x: 1768225909.0582364
[2026-01-12 14:19:27] 2026-01-12 19:18:42,715 | INFO     | mean y: 3647502.823627288
[2026-01-12 14:19:27] 2026-01-12 19:18:42,715 | INFO     | intersect: -26025128235.691654
[2026-01-12 14:19:27] 2026-01-12 19:18:42,715 | INFO     | chi2: 3.051796751549695
[2026-01-12 14:19:27] 2026-01-12 19:18:42,715 | INFO     | current chi2=3.051796751549695 (change=6.465829274075984 %)
[2026-01-12 14:19:27] 2026-01-12 19:18:42,715 | INFO     | right removable region: 600
[2026-01-12 14:19:27] 2026-01-12 19:18:42,716 | INFO     | sum of square deviations: 72478323693.72592
[2026-01-12 14:19:27] 2026-01-12 19:18:42,720 | INFO     | sum of deviations: -206691534547.77026
[2026-01-12 14:19:27] 2026-01-12 19:18:42,721 | INFO     | mean x: 1768226671.4788961
[2026-01-12 14:19:27] 2026-01-12 19:18:42,721 | INFO     | mean y: 3586249.633116883
[2026-01-12 14:19:27] 2026-01-12 19:18:42,737 | INFO     | intersect: 5046162643.93108
[2026-01-12 14:19:27] 2026-01-12 19:18:42,737 | INFO     | chi2: 13.85042992845617
[2026-01-12 14:19:27] 2026-01-12 19:18:42,738 | INFO     | current chi2=13.85042992845617 (change=16.287580890696585 %)
[2026-01-12 14:19:27] 2026-01-12 19:18:42,738 | INFO     | left removable region: 10
[2026-01-12 14:19:27] 2026-01-12 19:18:42,738 | INFO     | sum of square deviations: 63684496859.43044
[2026-01-12 14:19:27] 2026-01-12 19:18:42,751 | INFO     | sum of deviations: 688276417043.2344
[2026-01-12 14:19:27] 2026-01-12 19:18:42,751 | INFO     | mean x: 1768226183.616949
[2026-01-12 14:19:27] 2026-01-12 19:18:42,751 | INFO     | mean y: 3674805.9966101693
[2026-01-12 14:19:27] 2026-01-12 19:18:42,751 | INFO     | intersect: -19106602297.522465
[2026-01-12 14:19:27] 2026-01-12 19:18:42,752 | INFO     | chi2: 0.1204671387481995
[2026-01-12 14:19:27] 2026-01-12 19:18:42,752 | INFO     | current memory leak: 10.81 B/s (using 590 data points, chi2=0.12)
[2026-01-12 14:19:27] 2026-01-12 19:18:42,753 | INFO     | could have reported an average CPU frequency of 3797 MHz (24 samples)
[2026-01-12 14:19:27] 2026-01-12 19:18:42,753 | INFO     | ..............................
[2026-01-12 14:19:27] 2026-01-12 19:18:42,753 | INFO     | . Timing measurements:
[2026-01-12 14:19:27] 2026-01-12 19:18:42,753 | INFO     | . get job = 0 s
[2026-01-12 14:19:27] 2026-01-12 19:18:42,753 | INFO     | . initial setup = 2 s
[2026-01-12 14:19:27] 2026-01-12 19:18:42,753 | INFO     | . payload setup = 10 s
[2026-01-12 14:19:27] 2026-01-12 19:18:42,753 | INFO     | . stage-in = 0 s
[2026-01-12 14:19:27] 2026-01-12 19:18:42,753 | INFO     | . payload execution = 37880 s
[2026-01-12 14:19:27] 2026-01-12 19:18:42,753 | INFO     | . stage-out = 5 s
[2026-01-12 14:19:27] 2026-01-12 19:18:42,753 | INFO     | . log creation = 1 s
[2026-01-12 14:19:27] 2026-01-12 19:18:42,753 | INFO     | ..............................
[2026-01-12 14:19:27] 2026-01-12 19:18:42,862 | INFO     | 
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | job summary report
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | --------------------------------------------------
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | PanDA job id: 6966841401
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | task id: 48187943
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | errors: (none)
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | pilot state: finished 
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | transexitcode: 0
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | exeerrorcode: 0
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | exeerrordiag: 
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | exitcode: 0
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | exitmsg: OK
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | cpuconsumptiontime: 162337 s
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | nevents: 2050
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | neventsw: 0
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | pid: 4000903
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | pgrp: 4000903
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | corecount: 9
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | event service: False
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | sizes: {0: 2286981, 5: 2287275, 11: 2287331, 37893: 2349082, 37894: 2349081, 37900: 2357023, 37901: 2357207, 37933: 2357453}
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | --------------------------------------------------
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | 
[2026-01-12 14:19:27] 2026-01-12 19:18:42,863 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-12 14:19:27] 2026-01-12 19:18:42,910 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 14:19:27] 2026-01-12 19:18:42,911 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 14:19:27] 2026-01-12 19:18:42,911 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 14:19:27] 2026-01-12 19:18:42,911 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 14:19:27] 2026-01-12 19:18:42,912 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 14:19:27] 2026-01-12 19:18:42,912 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 14:19:27] 2026-01-12 19:18:42,912 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 14:19:27] 2026-01-12 19:18:42,912 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 14:19:27] 2026-01-12 19:18:42,912 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 14:19:27] 2026-01-12 19:18:42,912 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 14:19:27] 2026-01-12 19:18:42,913 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 14:19:27] 2026-01-12 19:18:42,913 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 14:19:27] 2026-01-12 19:18:42,913 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 14:19:27] 2026-01-12 19:18:42,913 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 14:19:27] 2026-01-12 19:18:42,913 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 14:19:27] 2026-01-12 19:18:42,913 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 14:19:27] 2026-01-12 19:18:42,913 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 14:19:27] 2026-01-12 19:18:42,913 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 14:19:27] 2026-01-12 19:18:42,913 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 14:19:27] 2026-01-12 19:18:42,914 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 14:19:27] 2026-01-12 19:18:42,914 | INFO     | job 6966841401 has completed (purged errors)
[2026-01-12 14:19:27] 2026-01-12 19:18:42,914 | INFO     | overall cleanup function is called
[2026-01-12 14:19:27] 2026-01-12 19:18:43,943 | INFO     | --- collectZombieJob: --- 10, [4000903]
[2026-01-12 14:19:27] 2026-01-12 19:18:43,944 | INFO     | zombie collector waiting for pid 4000903
[2026-01-12 14:19:27] 2026-01-12 19:18:43,944 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 14:19:27] 2026-01-12 19:18:43,944 | INFO     | collected zombie processes
[2026-01-12 14:19:27] 2026-01-12 19:18:43,954 | INFO     | will attempt to kill all subprocesses of pid=4000903
[2026-01-12 14:19:27] 2026-01-12 19:18:45,260 | INFO     | process IDs to be killed: [4000903] (in reverse order)
[2026-01-12 14:19:27] 2026-01-12 19:18:45,462 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 14:19:27] 2026-01-12 19:18:45,462 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 14:19:27] 2026-01-12 19:18:45,509 | INFO     | did not find any defunct processes belonging to 4000903
[2026-01-12 14:19:27] 2026-01-12 19:18:45,571 | INFO     | did not find any defunct processes belonging to 4000903
[2026-01-12 14:19:27] 2026-01-12 19:18:45,571 | INFO     | ready for new job
[2026-01-12 14:19:27] 2026-01-12 19:18:45,571 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 14:19:27] 2026-01-12 19:18:45,584 | INFO     | ***************************************
[2026-01-12 14:19:27] 2026-01-12 19:18:45,584 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 14:19:27] 2026-01-12 19:18:45,584 | INFO     | ***************************************
[2026-01-12 14:19:27] 2026-01-12 19:18:45,584 | INFO     | 
[2026-01-12 14:19:27] 2026-01-12 19:18:45,599 | INFO     | architecture information:
[2026-01-12 14:19:27] 2026-01-12 19:18:45,603 | INFO     | executing command: cat /etc/os-release
[2026-01-12 14:19:27] 2026-01-12 19:18:45,635 | INFO     | cat /etc/os-release:
[2026-01-12 14:19:27] NAME="CentOS Linux"
[2026-01-12 14:19:27] VERSION="7 (Core)"
[2026-01-12 14:19:27] ID="centos"
[2026-01-12 14:19:27] ID_LIKE="rhel fedora"
[2026-01-12 14:19:27] VERSION_ID="7"
[2026-01-12 14:19:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 14:19:27] ANSI_COLOR="0;31"
[2026-01-12 14:19:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 14:19:27] HOME_URL="https://www.centos.org/"
[2026-01-12 14:19:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 14:19:27] 
[2026-01-12 14:19:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 14:19:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 14:19:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 14:19:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 14:19:27] 
[2026-01-12 14:19:27] 2026-01-12 19:18:45,635 | INFO     | ***************************************
[2026-01-12 14:19:27] 2026-01-12 19:18:46,138 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-12 14:19:27] 2026-01-12 19:18:46,193 | INFO     | sufficient remaining disk space (156764209152 B)
[2026-01-12 14:19:27] 2026-01-12 19:18:46,193 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 14:19:27] 2026-01-12 19:18:46,195 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 14:19:27] 2026-01-12 19:18:46,195 | INFO     | update_server=False
[2026-01-12 14:19:27] 2026-01-12 19:18:46,195 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 14:19:27] 2026-01-12 19:18:46,195 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 14:19:27] 2026-01-12 19:18:46,321 | INFO     | all data control threads have been joined
[2026-01-12 14:19:27] 2026-01-12 19:18:46,629 | INFO     | all payload control threads have been joined
[2026-01-12 14:19:27] 2026-01-12 19:18:46,925 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 14:19:27] 2026-01-12 19:18:46,925 | INFO     | aborting loop
[2026-01-12 14:19:27] 2026-01-12 19:18:47,200 | INFO     | [job] retrieve thread has finished
[2026-01-12 14:19:27] 2026-01-12 19:18:47,228 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 14:19:27] 2026-01-12 19:18:47,272 | INFO     | [job] validate thread has finished
[2026-01-12 14:19:27] 2026-01-12 19:18:47,327 | INFO     | [data] control thread has finished
[2026-01-12 14:19:27] 2026-01-12 19:18:47,512 | INFO     | [data] copytool_in thread has finished
[2026-01-12 14:19:27] 2026-01-12 19:18:47,603 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 14:19:27] 2026-01-12 19:18:47,635 | INFO     | [payload] control thread has finished
[2026-01-12 14:19:27] 2026-01-12 19:18:47,784 | INFO     | all job control threads have been joined
[2026-01-12 14:19:27] 2026-01-12 19:18:47,849 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 14:19:27] 2026-01-12 19:18:47,894 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 14:19:27] 2026-01-12 19:18:47,931 | INFO     | [job] job monitor thread has finished
[2026-01-12 14:19:27] 2026-01-12 19:18:48,079 | INFO     | [payload] failed_post thread has finished
[2026-01-12 14:19:27] 2026-01-12 19:18:48,119 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 14:19:27] 2026-01-12 19:18:48,155 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 14:19:27] 2026-01-12 19:18:48,205 | INFO     | [data] copytool_out thread has finished
[2026-01-12 14:19:27] 2026-01-12 19:18:48,439 | INFO     | [payload] validate_post thread has finished
[2026-01-12 14:19:27] 2026-01-12 19:18:48,790 | INFO     | [job] control thread has finished
[2026-01-12 14:19:27] 2026-01-12 19:18:48,900 | INFO     | [job] queue monitor thread has finished
[2026-01-12 14:19:27] 2026-01-12 19:18:52,129 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 14:19:27] 2026-01-12 19:19:17,186 | INFO     | PID=3982512 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 14:19:27] 2026-01-12 19:19:17,186 | INFO     | .. there are 31 such processes running
[2026-01-12 14:19:27] 2026-01-12 19:19:17,187 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 14:19:27] 2026-01-12 19:19:17,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 14:19:27] 2026-01-12 19:19:17,187 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 14:19:27] 2026-01-12 19:19:19,404 | INFO     | [monitor] cgroup control has ended
[2026-01-12 14:19:27] 2026-01-12 19:19:20,533 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140300065146688)>', '<ExcThread(monitor, started 140299133253376)>']
[2026-01-12 14:19:27] 2026-01-12 19:19:21,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 14:19:27] 2026-01-12 19:19:21,211 | INFO     | [monitor] control thread has ended
[2026-01-12 14:19:27] 2026-01-12 19:19:25,559 | INFO     | all workflow threads have been joined
[2026-01-12 14:19:27] 2026-01-12 19:19:25,559 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 14:19:27] 2026-01-12 19:19:25,559 | INFO     | traces error code: 0
[2026-01-12 14:19:27] 2026-01-12 19:19:25,559 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 14:19:27] 2026-01-12 19:19:26,048 [wrapper] ==== pilot stdout END ====
[2026-01-12 14:19:27] 2026-01-12 19:19:26,084 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 14:19:27] 2026-01-12 19:19:26,139 [wrapper] pilotpid: 3982512
[2026-01-12 14:19:27] 2026-01-12 19:19:26,161 [wrapper] Pilot exit status: 0
[2026-01-12 14:19:27] 2026-01-12 19:19:26,236 [wrapper] pandaids: 6966841401
[2026-01-12 14:19:27] 2026-01-12 19:19:26,441 [wrapper] cleanup supervisor_pilot 2889894 3982513
[2026-01-12 14:19:27] 2026-01-12 19:19:26,456 [wrapper] Test setup, not cleaning
[2026-01-12 14:19:27] 2026-01-12 19:19:26,466 [wrapper] apfmon messages muted
[2026-01-12 14:19:27] 2026-01-12 19:19:26,484 [wrapper] ==== wrapper stdout END ====
[2026-01-12 14:19:27] 2026-01-12 19:19:26,496 [wrapper] ==== wrapper stderr END ====
[2026-01-12 14:19:27]  *** Error codes and diagnostics ***
[2026-01-12 14:19:27]     "exeErrorCode": 0,
[2026-01-12 14:19:27]     "exeErrorDiag": "",
[2026-01-12 14:19:27]     "pilotErrorCode": 0,
[2026-01-12 14:19:27]     "pilotErrorDiag": "",
[2026-01-12 14:19:27]  *** Listing of results directory ***
[2026-01-12 14:19:27] total 1787564
[2026-01-12 14:19:27] -rw-r--r--. 1 boincer umatlas     579449 Jan 12 03:42 pilot3.tar.gz
[2026-01-12 14:19:27] -rw-r--r--. 1 boincer umatlas       5112 Jan 12 03:43 queuedata.json
[2026-01-12 14:19:27] -rwx------. 1 boincer umatlas      36322 Jan 12 03:43 runpilot2-wrapper.sh
[2026-01-12 14:19:27] -rw-r--r--. 1 boincer umatlas        100 Jan 12 03:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 14:19:27] -rwxr-xr-x. 1 boincer umatlas       7986 Jan 12 03:45 run_atlas
[2026-01-12 14:19:27] -rw-r--r--. 1 boincer umatlas        105 Jan 12 03:45 job.xml
[2026-01-12 14:19:27] -rw-r--r--. 2 boincer umatlas  319514278 Jan 12 03:46 EVNT.48118027._000042.pool.root.1
[2026-01-12 14:19:27] -rw-r--r--. 2 boincer umatlas  321290871 Jan 12 03:46 EVNT.48118027._000043.pool.root.1
[2026-01-12 14:19:27] -rw-r--r--. 2 boincer umatlas      15897 Jan 12 03:46 start_atlas.sh
[2026-01-12 14:19:27] drwxrwx--x. 2 boincer umatlas       4096 Jan 12 03:46 shared
[2026-01-12 14:19:27] -rw-r--r--. 2 boincer umatlas     592699 Jan 12 03:46 input.tar.gz
[2026-01-12 14:19:27] -rw-r--r--. 1 boincer umatlas          0 Jan 12 03:46 boinc_lockfile
[2026-01-12 14:19:27] -rw-r--r--. 1 boincer umatlas       3434 Jan 12 03:46 pandaJob.out
[2026-01-12 14:19:27] -rw-------. 1 boincer umatlas         57 Jan 12 03:46 setup.sh.local
[2026-01-12 14:19:27] -rw-------. 1 boincer umatlas     987688 Jan 12 03:46 agis_schedconf.cvmfs.json
[2026-01-12 14:19:27] drwx------. 5 boincer umatlas       4096 Jan 12 03:46 pilot3
[2026-01-12 14:19:27] -rw-r--r--. 1 boincer umatlas        533 Jan 12 13:59 boinc_task_state.xml
[2026-01-12 14:19:27] -rw-------. 1 boincer umatlas 1171371245 Jan 12 14:17 HITS.48187943._000205.pool.root.1
[2026-01-12 14:19:27] -rw-------. 1 boincer umatlas       1055 Jan 12 14:17 memory_monitor_summary.json
[2026-01-12 14:19:27] -rw-------. 1 boincer umatlas    1516240 Jan 12 14:18 agis_ddmendpoints.agis.ALL.json
[2026-01-12 14:19:27] -rw-------. 1 boincer umatlas    2298676 Jan 12 14:18 log.48187943._000205.job.log.tgz.1
[2026-01-12 14:19:27] -rw-------. 1 boincer umatlas      27441 Jan 12 14:18 heartbeat.json
[2026-01-12 14:19:27] -rw-r--r--. 1 boincer umatlas       7174 Jan 12 14:19 init_data.xml
[2026-01-12 14:19:27] -rw-------. 1 boincer umatlas         95 Jan 12 14:19 pilot_heartbeat.json
[2026-01-12 14:19:27] -rw-r--r--. 1 boincer umatlas       8192 Jan 12 14:19 boinc_mmap_file
[2026-01-12 14:19:27] -rw-r--r--. 1 boincer umatlas         29 Jan 12 14:19 wrapper_checkpoint.txt
[2026-01-12 14:19:27] -rw-------. 1 boincer umatlas       4825 Jan 12 14:19 pilotlog.txt
[2026-01-12 14:19:27] -rw-------. 1 boincer umatlas    4859296 Jan 12 14:19 log.48187943._000205.job.log.1
[2026-01-12 14:19:27] -rw-------. 1 boincer umatlas        353 Jan 12 14:19 output.list
[2026-01-12 14:19:27] -rw-r--r--. 1 boincer umatlas        620 Jan 12 14:19 runtime_log
[2026-01-12 14:19:27] -rw-------. 1 boincer umatlas    7198720 Jan 12 14:19 result.tar.gz
[2026-01-12 14:19:27] -rw-r--r--. 1 boincer umatlas       9385 Jan 12 14:19 runtime_log.err
[2026-01-12 14:19:27] -rw-------. 1 boincer umatlas        660 Jan 12 14:19 BSNNDmwhSz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDme6mKDmyY8b2m.diag
[2026-01-12 14:19:27] -rw-r--r--. 1 boincer umatlas      21004 Jan 12 14:19 stderr.txt
[2026-01-12 14:19:27] HITS file was successfully produced:
[2026-01-12 14:19:27] -rw-------. 1 boincer umatlas 1171371245 Jan 12 14:17 shared/HITS.pool.root.1
[2026-01-12 14:19:27]  *** Contents of shared directory: ***
[2026-01-12 14:19:27] total 1777352
[2026-01-12 14:19:27] -rw-r--r--. 2 boincer umatlas  319514278 Jan 12 03:46 ATLAS.root_0
[2026-01-12 14:19:27] -rw-r--r--. 2 boincer umatlas  321290871 Jan 12 03:46 ATLAS.root_1
[2026-01-12 14:19:27] -rw-r--r--. 2 boincer umatlas      15897 Jan 12 03:46 start_atlas.sh
[2026-01-12 14:19:27] -rw-r--r--. 2 boincer umatlas     592699 Jan 12 03:46 input.tar.gz
[2026-01-12 14:19:27] -rw-------. 1 boincer umatlas 1171371245 Jan 12 14:17 HITS.pool.root.1
[2026-01-12 14:19:27] -rw-------. 1 boincer umatlas    7198720 Jan 12 14:19 result.tar.gz
14:19:29 (3976259): run_atlas exited; CPU time 163100.235866
14:19:29 (3976259): called boinc_finish(0)

</stderr_txt>
]]>

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