Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:21:12 (1014954): wrapper (7.7.26015): starting
02:21:12 (1014954): wrapper: running run_atlas (--nthreads 11)
[2026-01-12 02:21:12] Arguments: --nthreads 11
[2026-01-12 02:21:12] Threads: 11
[2026-01-12 02:21:12] Checking for CVMFS
[2026-01-12 02:21:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 02:21:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 02:21:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 02:21:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 02:21:13] 2.13.3.0 9582 97401 177976 155044 2 59 38570375 40960001 19204 16776704 0 1133058328 99.717 846570114 48795 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 02:21:13] CVMFS is ok
[2026-01-12 02:21:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 02:21:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 02:21:13] Further information can be found at the LHC@home message board.
[2026-01-12 02:21:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 02:21:13] Checking for apptainer binary...
[2026-01-12 02:21:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 02:21:13] Running /usr/bin/apptainer --version
[2026-01-12 02:21:13] apptainer version 1.4.5-2.el9
[2026-01-12 02:21:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 02:21:13] c8-7-4.aglt2.org
[2026-01-12 02:21:13] apptainer works
[2026-01-12 02:21:13] Set ATHENA_PROC_NUMBER=11
[2026-01-12 02:21:13] Set ATHENA_CORE_NUMBER=11
[2026-01-12 02:21:13] Starting ATLAS job with PandaID=6966779213
[2026-01-12 02:21:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 02:58:41]  *** The last 200 lines of the pilot log: ***
[2026-01-12 02:58:42] 2026-01-12 07:57:44,881 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 02:58:42] 2026-01-12 07:57:45,371 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-12 02:58:42] 2026-01-12 07:57:45,797 | INFO     | time since job start (2175s) is within the limit (349056.0s)
[2026-01-12 02:58:42] 2026-01-12 07:57:46,479 | INFO     | job 6966779213 has state=finished
[2026-01-12 02:58:42] 2026-01-12 07:57:46,479 | INFO     | preparing for final server update for job 6966779213 in state='finished'
[2026-01-12 02:58:42] 2026-01-12 07:57:46,479 | INFO     | this job has now completed (state=finished)
[2026-01-12 02:58:42] 2026-01-12 07:57:46,479 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-12 02:58:42] 2026-01-12 07:57:46,479 | INFO     | log transfer has been attempted: DONE
[2026-01-12 02:58:42] 2026-01-12 07:57:46,479 | INFO     | job 6966779213 has finished - writing final server update
[2026-01-12 02:58:42] 2026-01-12 07:57:46,480 | INFO     | total number of processed events: 50 (read)
[2026-01-12 02:58:42] 2026-01-12 07:57:46,491 | INFO     | executing command: lscpu
[2026-01-12 02:58:42] 2026-01-12 07:57:46,652 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-12 02:58:42] 2026-01-12 07:57:47,385 | INFO     | monitor loop #146: job 0:6966779213 is in state 'finished'
[2026-01-12 02:58:42] 2026-01-12 07:57:47,386 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 02:58:42] 2026-01-12 07:57:47,803 | INFO     | time since job start (2177s) is within the limit (349056.0s)
[2026-01-12 02:58:42] 2026-01-12 07:57:49,810 | INFO     | time since job start (2179s) is within the limit (349056.0s)
[2026-01-12 02:58:42] 2026-01-12 07:57:49,890 | INFO     | monitor loop #147: job 0:6966779213 is in state 'finished'
[2026-01-12 02:58:42] 2026-01-12 07:57:49,891 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 02:58:42] 2026-01-12 07:57:51,821 | INFO     | PID=1020868 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 02:58:42] 2026-01-12 07:57:51,821 | INFO     | .. there are 22 such processes running
[2026-01-12 02:58:42] 2026-01-12 07:57:52,395 | INFO     | monitor loop #148: job 0:6966779213 is in state 'finished'
[2026-01-12 02:58:42] 2026-01-12 07:57:52,396 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 02:58:42] 2026-01-12 07:57:52,822 | INFO     | time since job start (2182s) is within the limit (349056.0s)
[2026-01-12 02:58:42] 2026-01-12 07:57:54,835 | INFO     | time since job start (2184s) is within the limit (349056.0s)
[2026-01-12 02:58:42] 2026-01-12 07:57:54,913 | INFO     | monitor loop #149: job 0:6966779213 is in state 'finished'
[2026-01-12 02:58:42] 2026-01-12 07:57:54,914 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 02:58:42] 2026-01-12 07:57:56,842 | INFO     | time since job start (2186s) is within the limit (349056.0s)
[2026-01-12 02:58:42] 2026-01-12 07:57:57,418 | INFO     | monitor loop #150: job 0:6966779213 is in state 'finished'
[2026-01-12 02:58:42] 2026-01-12 07:57:57,419 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 02:58:42] 2026-01-12 07:57:58,849 | INFO     | time since job start (2188s) is within the limit (349056.0s)
[2026-01-12 02:58:42] 2026-01-12 07:57:59,931 | INFO     | monitor loop #151: job 0:6966779213 is in state 'finished'
[2026-01-12 02:58:42] 2026-01-12 07:57:59,931 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 02:58:42] 2026-01-12 07:58:00,856 | INFO     | time since job start (2190s) is within the limit (349056.0s)
[2026-01-12 02:58:42] 2026-01-12 07:58:02,435 | INFO     | monitor loop #152: job 0:6966779213 is in state 'finished'
[2026-01-12 02:58:42] 2026-01-12 07:58:02,436 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 02:58:42] 2026-01-12 07:58:02,863 | INFO     | time since job start (2192s) is within the limit (349056.0s)
[2026-01-12 02:58:42] 2026-01-12 07:58:04,330 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-12 02:58:42] 2026-01-12 07:58:04,337 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9959453124993
[2026-01-12 02:58:42] 2026-01-12 07:58:04,356 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6966779213/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 02:58:42] 2026-01-12 07:58:04,357 | INFO     | extracted standard info from prmon json
[2026-01-12 02:58:42] 2026-01-12 07:58:04,357 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 02:58:42] 2026-01-12 07:58:04,357 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 02:58:42] 2026-01-12 07:58:04,358 | INFO     | fitting pss+swap vs Time
[2026-01-12 02:58:42] 2026-01-12 07:58:04,358 | INFO     | sum of square deviations: 6787146.107142857
[2026-01-12 02:58:42] 2026-01-12 07:58:04,358 | INFO     | sum of deviations: -10388521478.000002
[2026-01-12 02:58:42] 2026-01-12 07:58:04,358 | INFO     | mean x: 1768203665.8214285
[2026-01-12 02:58:42] 2026-01-12 07:58:04,358 | INFO     | mean y: 2349059.0
[2026-01-12 02:58:42] 2026-01-12 07:58:04,358 | INFO     | intersect: 2706445008446.06
[2026-01-12 02:58:42] 2026-01-12 07:58:04,358 | INFO     | chi2: 5.6779412133204055
[2026-01-12 02:58:42] 2026-01-12 07:58:04,359 | INFO     | current memory leak: -1530.62 B/s (using 28 data points, chi2=5.68)
[2026-01-12 02:58:42] 2026-01-12 07:58:04,359 | INFO     | could have reported an average CPU frequency of 3795 MHz (5 samples)
[2026-01-12 02:58:42] 2026-01-12 07:58:04,359 | INFO     | ..............................
[2026-01-12 02:58:42] 2026-01-12 07:58:04,359 | INFO     | . Timing measurements:
[2026-01-12 02:58:42] 2026-01-12 07:58:04,359 | INFO     | . get job = 0 s
[2026-01-12 02:58:42] 2026-01-12 07:58:04,359 | INFO     | . initial setup = 2 s
[2026-01-12 02:58:42] 2026-01-12 07:58:04,359 | INFO     | . payload setup = 11 s
[2026-01-12 02:58:42] 2026-01-12 07:58:04,359 | INFO     | . stage-in = 0 s
[2026-01-12 02:58:42] 2026-01-12 07:58:04,359 | INFO     | . payload execution = 2133 s
[2026-01-12 02:58:42] 2026-01-12 07:58:04,359 | INFO     | . stage-out = 1 s
[2026-01-12 02:58:42] 2026-01-12 07:58:04,359 | INFO     | . log creation = 0 s
[2026-01-12 02:58:42] 2026-01-12 07:58:04,359 | INFO     | ..............................
[2026-01-12 02:58:42] 2026-01-12 07:58:04,847 | INFO     | 
[2026-01-12 02:58:42] 2026-01-12 07:58:04,847 | INFO     | job summary report
[2026-01-12 02:58:42] 2026-01-12 07:58:04,847 | INFO     | --------------------------------------------------
[2026-01-12 02:58:42] 2026-01-12 07:58:04,847 | INFO     | PanDA job id: 6966779213
[2026-01-12 02:58:42] 2026-01-12 07:58:04,847 | INFO     | task id: 47962010
[2026-01-12 02:58:42] 2026-01-12 07:58:04,847 | INFO     | errors: (none)
[2026-01-12 02:58:42] 2026-01-12 07:58:04,847 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 02:58:42] 2026-01-12 07:58:04,847 | INFO     | pilot state: finished 
[2026-01-12 02:58:42] 2026-01-12 07:58:04,848 | INFO     | transexitcode: 0
[2026-01-12 02:58:42] 2026-01-12 07:58:04,848 | INFO     | exeerrorcode: 0
[2026-01-12 02:58:42] 2026-01-12 07:58:04,848 | INFO     | exeerrordiag: 
[2026-01-12 02:58:42] 2026-01-12 07:58:04,848 | INFO     | exitcode: 0
[2026-01-12 02:58:42] 2026-01-12 07:58:04,848 | INFO     | exitmsg: OK
[2026-01-12 02:58:42] 2026-01-12 07:58:04,848 | INFO     | cpuconsumptiontime: 8238 s
[2026-01-12 02:58:42] 2026-01-12 07:58:04,848 | INFO     | nevents: 50
[2026-01-12 02:58:42] 2026-01-12 07:58:04,848 | INFO     | neventsw: 0
[2026-01-12 02:58:42] 2026-01-12 07:58:04,848 | INFO     | pid: 1039108
[2026-01-12 02:58:42] 2026-01-12 07:58:04,848 | INFO     | pgrp: 1039108
[2026-01-12 02:58:42] 2026-01-12 07:58:04,848 | INFO     | corecount: 11
[2026-01-12 02:58:42] 2026-01-12 07:58:04,848 | INFO     | event service: False
[2026-01-12 02:58:42] 2026-01-12 07:58:04,848 | INFO     | sizes: {0: 2284567, 9: 2284829, 11: 2284857, 2149: 2310646, 2151: 2319640, 2154: 2319696, 2173: 2320102}
[2026-01-12 02:58:42] 2026-01-12 07:58:04,848 | INFO     | --------------------------------------------------
[2026-01-12 02:58:42] 2026-01-12 07:58:04,848 | INFO     | 
[2026-01-12 02:58:42] 2026-01-12 07:58:04,848 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-12 02:58:42] 2026-01-12 07:58:04,873 | INFO     | time since job start (2194s) is within the limit (349056.0s)
[2026-01-12 02:58:42] 2026-01-12 07:58:04,986 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 02:58:42] 2026-01-12 07:58:04,987 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 02:58:42] 2026-01-12 07:58:04,987 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 02:58:42] 2026-01-12 07:58:04,987 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 02:58:42] 2026-01-12 07:58:04,987 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 02:58:42] 2026-01-12 07:58:04,987 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 02:58:42] 2026-01-12 07:58:04,987 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 02:58:42] 2026-01-12 07:58:04,987 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 02:58:42] 2026-01-12 07:58:04,987 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 02:58:42] 2026-01-12 07:58:04,987 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 02:58:42] 2026-01-12 07:58:04,987 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 02:58:42] 2026-01-12 07:58:04,987 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 02:58:42] 2026-01-12 07:58:04,987 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 02:58:42] 2026-01-12 07:58:04,987 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 02:58:42] 2026-01-12 07:58:04,987 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 02:58:42] 2026-01-12 07:58:04,987 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 02:58:42] 2026-01-12 07:58:04,987 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 02:58:42] 2026-01-12 07:58:04,987 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 02:58:42] 2026-01-12 07:58:04,987 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 02:58:42] 2026-01-12 07:58:04,987 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 02:58:42] 2026-01-12 07:58:04,987 | INFO     | job 6966779213 has completed (purged errors)
[2026-01-12 02:58:42] 2026-01-12 07:58:04,988 | INFO     | overall cleanup function is called
[2026-01-12 02:58:42] 2026-01-12 07:58:06,008 | INFO     | --- collectZombieJob: --- 10, [1039108]
[2026-01-12 02:58:42] 2026-01-12 07:58:06,009 | INFO     | zombie collector waiting for pid 1039108
[2026-01-12 02:58:42] 2026-01-12 07:58:06,009 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 02:58:42] 2026-01-12 07:58:06,009 | INFO     | collected zombie processes
[2026-01-12 02:58:42] 2026-01-12 07:58:06,009 | INFO     | will attempt to kill all subprocesses of pid=1039108
[2026-01-12 02:58:42] 2026-01-12 07:58:06,482 | INFO     | process IDs to be killed: [1039108] (in reverse order)
[2026-01-12 02:58:42] 2026-01-12 07:58:06,629 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 02:58:42] 2026-01-12 07:58:06,630 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 02:58:42] 2026-01-12 07:58:06,651 | INFO     | did not find any defunct processes belonging to 1039108
[2026-01-12 02:58:42] 2026-01-12 07:58:06,670 | INFO     | did not find any defunct processes belonging to 1039108
[2026-01-12 02:58:42] 2026-01-12 07:58:06,670 | INFO     | ready for new job
[2026-01-12 02:58:42] 2026-01-12 07:58:06,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 02:58:42] 2026-01-12 07:58:06,672 | INFO     | ***************************************
[2026-01-12 02:58:42] 2026-01-12 07:58:06,672 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 02:58:42] 2026-01-12 07:58:06,672 | INFO     | ***************************************
[2026-01-12 02:58:42] 2026-01-12 07:58:06,672 | INFO     | 
[2026-01-12 02:58:42] 2026-01-12 07:58:06,676 | INFO     | architecture information:
[2026-01-12 02:58:42] 2026-01-12 07:58:06,677 | INFO     | executing command: cat /etc/os-release
[2026-01-12 02:58:42] 2026-01-12 07:58:06,719 | INFO     | cat /etc/os-release:
[2026-01-12 02:58:42] NAME="CentOS Linux"
[2026-01-12 02:58:42] VERSION="7 (Core)"
[2026-01-12 02:58:42] ID="centos"
[2026-01-12 02:58:42] ID_LIKE="rhel fedora"
[2026-01-12 02:58:42] VERSION_ID="7"
[2026-01-12 02:58:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 02:58:42] ANSI_COLOR="0;31"
[2026-01-12 02:58:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 02:58:42] HOME_URL="https://www.centos.org/"
[2026-01-12 02:58:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 02:58:42] 
[2026-01-12 02:58:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 02:58:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 02:58:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 02:58:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 02:58:42] 
[2026-01-12 02:58:42] 2026-01-12 07:58:06,720 | INFO     | ***************************************
[2026-01-12 02:58:42] 2026-01-12 07:58:07,223 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-12 02:58:42] 2026-01-12 07:58:07,288 | INFO     | sufficient remaining disk space (172592463872 B)
[2026-01-12 02:58:42] 2026-01-12 07:58:07,288 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 02:58:42] 2026-01-12 07:58:07,289 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 02:58:42] 2026-01-12 07:58:07,289 | INFO     | update_server=False
[2026-01-12 02:58:42] 2026-01-12 07:58:07,289 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 02:58:42] 2026-01-12 07:58:07,444 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-12 02:58:42] 2026-01-12 07:58:07,445 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-12 02:58:42] 2026-01-12 07:58:07,445 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 02:58:42] 2026-01-12 07:58:07,445 | INFO     | will abort loop
[2026-01-12 02:58:42] 2026-01-12 07:58:08,150 | INFO     | all data control threads have been joined
[2026-01-12 02:58:42] 2026-01-12 07:58:08,172 | INFO     | all payload control threads have been joined
[2026-01-12 02:58:42] 2026-01-12 07:58:08,262 | INFO     | all job control threads have been joined
[2026-01-12 02:58:42] 2026-01-12 07:58:08,295 | INFO     | [job] retrieve thread has finished
[2026-01-12 02:58:42] 2026-01-12 07:58:08,345 | INFO     | [data] copytool_in thread has finished
[2026-01-12 02:58:42] 2026-01-12 07:58:08,451 | INFO     | [job] job monitor thread has finished
[2026-01-12 02:58:42] 2026-01-12 07:58:08,464 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 02:58:42] 2026-01-12 07:58:08,593 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 02:58:42] 2026-01-12 07:58:08,894 | INFO     | [payload] validate_post thread has finished
[2026-01-12 02:58:42] 2026-01-12 07:58:09,157 | INFO     | [data] control thread has finished
[2026-01-12 02:58:42] 2026-01-12 07:58:09,178 | INFO     | [payload] control thread has finished
[2026-01-12 02:58:42] 2026-01-12 07:58:09,270 | INFO     | [job] control thread has finished
[2026-01-12 02:58:42] 2026-01-12 07:58:09,389 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 02:58:42] 2026-01-12 07:58:09,402 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 02:58:42] 2026-01-12 07:58:09,415 | INFO     | [job] validate thread has finished
[2026-01-12 02:58:42] 2026-01-12 07:58:09,448 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 02:58:42] 2026-01-12 07:58:09,501 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 02:58:42] 2026-01-12 07:58:09,792 | INFO     | [payload] failed_post thread has finished
[2026-01-12 02:58:42] 2026-01-12 07:58:10,454 | INFO     | [job] queue monitor thread has finished
[2026-01-12 02:58:42] 2026-01-12 07:58:10,471 | INFO     | [data] copytool_out thread has finished
[2026-01-12 02:58:42] 2026-01-12 07:58:13,514 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 02:58:42] 2026-01-12 07:58:17,679 | INFO     | job.realtimelogging is not enabled
[2026-01-12 02:58:42] 2026-01-12 07:58:18,685 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 02:58:42] 2026-01-12 07:58:33,850 | INFO     | [monitor] cgroup control has ended
[2026-01-12 02:58:42] 2026-01-12 07:58:35,764 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139701276600128)>', '<ExcThread(monitor, started 139700631226112)>']
[2026-01-12 02:58:42] 2026-01-12 07:58:38,605 | INFO     | PID=1020868 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 02:58:42] 2026-01-12 07:58:38,608 | INFO     | .. there are 22 such processes running
[2026-01-12 02:58:42] 2026-01-12 07:58:38,609 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 02:58:42] 2026-01-12 07:58:38,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 02:58:42] 2026-01-12 07:58:38,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 02:58:42] 2026-01-12 07:58:38,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 02:58:42] 2026-01-12 07:58:38,609 | INFO     | [monitor] control thread has ended
[2026-01-12 02:58:42] 2026-01-12 07:58:40,790 | INFO     | all workflow threads have been joined
[2026-01-12 02:58:42] 2026-01-12 07:58:40,791 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 02:58:42] 2026-01-12 07:58:40,791 | INFO     | traces error code: 0
[2026-01-12 02:58:42] 2026-01-12 07:58:40,791 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 02:58:42] 2026-01-12 07:58:41,005 [wrapper] ==== pilot stdout END ====
[2026-01-12 02:58:42] 2026-01-12 07:58:41,032 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 02:58:42] 2026-01-12 07:58:41,046 [wrapper] pilotpid: 1020868
[2026-01-12 02:58:42] 2026-01-12 07:58:41,049 [wrapper] Pilot exit status: 0
[2026-01-12 02:58:42] 2026-01-12 07:58:41,078 [wrapper] pandaids: 6966779213
[2026-01-12 02:58:42] 2026-01-12 07:58:41,378 [wrapper] cleanup supervisor_pilot 1161122 1020869
[2026-01-12 02:58:42] 2026-01-12 07:58:41,411 [wrapper] Test setup, not cleaning
[2026-01-12 02:58:42] 2026-01-12 07:58:41,433 [wrapper] apfmon messages muted
[2026-01-12 02:58:42] 2026-01-12 07:58:41,470 [wrapper] ==== wrapper stdout END ====
[2026-01-12 02:58:42] 2026-01-12 07:58:41,494 [wrapper] ==== wrapper stderr END ====
[2026-01-12 02:58:42]  *** Error codes and diagnostics ***
[2026-01-12 02:58:42]     "exeErrorCode": 0,
[2026-01-12 02:58:42]     "exeErrorDiag": "",
[2026-01-12 02:58:42]     "pilotErrorCode": 0,
[2026-01-12 02:58:42]     "pilotErrorDiag": "",
[2026-01-12 02:58:42]  *** Listing of results directory ***
[2026-01-12 02:58:42] total 437448
[2026-01-12 02:58:42] -rwx------. 1 boincer umatlas     36322 Jan 12 02:20 runpilot2-wrapper.sh
[2026-01-12 02:58:42] -rw-r--r--. 1 boincer umatlas      5112 Jan 12 02:20 queuedata.json
[2026-01-12 02:58:42] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 02:20 pilot3.tar.gz
[2026-01-12 02:58:42] -rw-r--r--. 1 boincer umatlas       100 Jan 12 02:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 02:58:42] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 12 02:21 run_atlas
[2026-01-12 02:58:42] -rw-r--r--. 1 boincer umatlas       105 Jan 12 02:21 job.xml
[2026-01-12 02:58:42] -rw-r--r--. 2 boincer umatlas 395458336 Jan 12 02:21 EVNT.47962006._000056.pool.root.1
[2026-01-12 02:58:42] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 02:21 start_atlas.sh
[2026-01-12 02:58:42] drwxrwx--x. 2 boincer umatlas      4096 Jan 12 02:21 shared
[2026-01-12 02:58:42] -rw-r--r--. 2 boincer umatlas    592601 Jan 12 02:21 input.tar.gz
[2026-01-12 02:58:42] -rw-r--r--. 1 boincer umatlas         0 Jan 12 02:21 boinc_lockfile
[2026-01-12 02:58:42] -rw-r--r--. 1 boincer umatlas      2888 Jan 12 02:21 pandaJob.out
[2026-01-12 02:58:42] -rw-------. 1 boincer umatlas        57 Jan 12 02:21 setup.sh.local
[2026-01-12 02:58:42] -rw-------. 1 boincer umatlas    987688 Jan 12 02:21 agis_schedconf.cvmfs.json
[2026-01-12 02:58:42] -rw-------. 1 boincer umatlas   1516240 Jan 12 02:21 agis_ddmendpoints.agis.ALL.json
[2026-01-12 02:58:42] drwx------. 5 boincer umatlas      4096 Jan 12 02:21 pilot3
[2026-01-12 02:58:42] -rw-r--r--. 1 boincer umatlas       528 Jan 12 02:45 boinc_task_state.xml
[2026-01-12 02:58:42] -rw-------. 1 boincer umatlas  44938999 Jan 12 02:57 HITS.47962010._003214.pool.root.1
[2026-01-12 02:58:42] -rw-------. 1 boincer umatlas      1030 Jan 12 02:57 memory_monitor_summary.json
[2026-01-12 02:58:42] -rw-------. 1 boincer umatlas   1469459 Jan 12 02:57 log.47962010._003214.job.log.tgz.1
[2026-01-12 02:58:42] -rw-r--r--. 1 boincer umatlas      7170 Jan 12 02:57 init_data.xml
[2026-01-12 02:58:42] -rw-------. 1 boincer umatlas      8524 Jan 12 02:58 heartbeat.json
[2026-01-12 02:58:42] -rw-r--r--. 1 boincer umatlas      8192 Jan 12 02:58 boinc_mmap_file
[2026-01-12 02:58:42] -rw-r--r--. 1 boincer umatlas        26 Jan 12 02:58 wrapper_checkpoint.txt
[2026-01-12 02:58:42] -rw-------. 1 boincer umatlas        95 Jan 12 02:58 pilot_heartbeat.json
[2026-01-12 02:58:42] -rw-------. 1 boincer umatlas      5083 Jan 12 02:58 pilotlog.txt
[2026-01-12 02:58:42] -rw-------. 1 boincer umatlas    344927 Jan 12 02:58 log.47962010._003214.job.log.1
[2026-01-12 02:58:42] -rw-------. 1 boincer umatlas       353 Jan 12 02:58 output.list
[2026-01-12 02:58:42] -rw-r--r--. 1 boincer umatlas       620 Jan 12 02:58 runtime_log
[2026-01-12 02:58:42] -rw-------. 1 boincer umatlas   1832960 Jan 12 02:58 result.tar.gz
[2026-01-12 02:58:42] -rw-r--r--. 1 boincer umatlas      9334 Jan 12 02:58 runtime_log.err
[2026-01-12 02:58:42] -rw-------. 1 boincer umatlas       650 Jan 12 02:58 3wXKDmvORz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmp5mKDmrf7Gnn.diag
[2026-01-12 02:58:42] -rw-r--r--. 1 boincer umatlas     22351 Jan 12 02:58 stderr.txt
[2026-01-12 02:58:42] HITS file was successfully produced:
[2026-01-12 02:58:42] -rw-------. 1 boincer umatlas 44938999 Jan 12 02:57 shared/HITS.pool.root.1
[2026-01-12 02:58:42]  *** Contents of shared directory: ***
[2026-01-12 02:58:42] total 432472
[2026-01-12 02:58:42] -rw-r--r--. 2 boincer umatlas 395458336 Jan 12 02:21 ATLAS.root_0
[2026-01-12 02:58:42] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 02:21 start_atlas.sh
[2026-01-12 02:58:42] -rw-r--r--. 2 boincer umatlas    592601 Jan 12 02:21 input.tar.gz
[2026-01-12 02:58:42] -rw-------. 1 boincer umatlas  44938999 Jan 12 02:57 HITS.pool.root.1
[2026-01-12 02:58:42] -rw-------. 1 boincer umatlas   1832960 Jan 12 02:58 result.tar.gz
02:58:43 (1014954): run_atlas exited; CPU time 8245.294807
02:58:43 (1014954): called boinc_finish(0)

</stderr_txt>
]]>

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