Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:20:58 (3198459): wrapper (7.7.26015): starting
02:20:58 (3198459): wrapper: running run_atlas (--nthreads 12)
[2026-01-12 02:20:58] Arguments: --nthreads 12
[2026-01-12 02:20:58] Threads: 12
[2026-01-12 02:20:58] Checking for CVMFS
[2026-01-12 02:20:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 02:20:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 02:20:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 02:20:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 02:20:59] 2.13.3.0 4306 94345 335288 155044 1 13 31406534 32935937 17423 16776704 0 441733612 99.702 333804692 32488 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-12 02:20:59] CVMFS is ok
[2026-01-12 02:20:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 02:20:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 02:20:59] Further information can be found at the LHC@home message board.
[2026-01-12 02:20:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 02:20:59] Checking for apptainer binary...
[2026-01-12 02:20:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 02:20:59] Running /usr/bin/apptainer --version
[2026-01-12 02:20:59] apptainer version 1.4.5-2.el9
[2026-01-12 02:20:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 02:20:59] c-6-4.aglt2.org
[2026-01-12 02:20:59] apptainer works
[2026-01-12 02:20:59] Set ATHENA_PROC_NUMBER=12
[2026-01-12 02:20:59] Set ATHENA_CORE_NUMBER=12
[2026-01-12 02:20:59] Starting ATLAS job with PandaID=6966779212
[2026-01-12 02:20:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 05:11:13]  *** The last 200 lines of the pilot log: ***
[2026-01-12 05:11:13] 2026-01-12 10:10:07,290 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 05:11:13] 2026-01-12 10:10:08,640 | INFO     | time since job start (10126s) is within the limit (349056.0s)
[2026-01-12 05:11:13] 2026-01-12 10:10:09,828 | INFO     | monitor loop #663: job 0:6966779212 is in state 'finished'
[2026-01-12 05:11:13] 2026-01-12 10:10:09,828 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 05:11:13] 2026-01-12 10:10:10,653 | INFO     | time since job start (10128s) is within the limit (349056.0s)
[2026-01-12 05:11:13] 2026-01-12 10:10:12,333 | INFO     | monitor loop #664: job 0:6966779212 is in state 'finished'
[2026-01-12 05:11:13] 2026-01-12 10:10:12,338 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 05:11:13] 2026-01-12 10:10:12,701 | INFO     | time since job start (10130s) is within the limit (349056.0s)
[2026-01-12 05:11:13] 2026-01-12 10:10:14,720 | INFO     | time since job start (10132s) is within the limit (349056.0s)
[2026-01-12 05:11:13] 2026-01-12 10:10:14,844 | INFO     | monitor loop #665: job 0:6966779212 is in state 'finished'
[2026-01-12 05:11:13] 2026-01-12 10:10:14,844 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 05:11:13] 2026-01-12 10:10:15,847 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 05:11:13] 2026-01-12 10:10:15,869 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8054
[2026-01-12 05:11:13] 2026-01-12 10:10:15,931 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966779212/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 05:11:13] 2026-01-12 10:10:15,932 | INFO     | extracted standard info from prmon json
[2026-01-12 05:11:13] 2026-01-12 10:10:15,932 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 05:11:13] 2026-01-12 10:10:15,933 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 05:11:13] 2026-01-12 10:10:15,955 | INFO     | fitting pss+swap vs Time
[2026-01-12 05:11:13] 2026-01-12 10:10:15,980 | INFO     | sum of square deviations: 1394421856.4484837
[2026-01-12 05:11:13] 2026-01-12 10:10:15,981 | INFO     | sum of deviations: -146017032764.73938
[2026-01-12 05:11:13] 2026-01-12 10:10:15,981 | INFO     | mean x: 1768207531.9030304
[2026-01-12 05:11:13] 2026-01-12 10:10:15,981 | INFO     | mean y: 2506567.0787878786
[2026-01-12 05:11:13] 2026-01-12 10:10:15,981 | INFO     | intersect: 185160546027.4868
[2026-01-12 05:11:13] 2026-01-12 10:10:15,982 | INFO     | chi2: 13.96485280872439
[2026-01-12 05:11:13] 2026-01-12 10:10:15,982 | INFO     | sum of square deviations: 1271777807.9437492
[2026-01-12 05:11:13] 2026-01-12 10:10:15,983 | INFO     | sum of deviations: -96809143280.125
[2026-01-12 05:11:13] 2026-01-12 10:10:15,983 | INFO     | mean x: 1768207379.51875
[2026-01-12 05:11:13] 2026-01-12 10:10:15,983 | INFO     | mean y: 2567737.375
[2026-01-12 05:11:13] 2026-01-12 10:10:15,983 | INFO     | intersect: 134600482942.05379
[2026-01-12 05:11:13] 2026-01-12 10:10:15,983 | INFO     | chi2: 10.888739943951167
[2026-01-12 05:11:13] 2026-01-12 10:10:16,001 | INFO     | current chi2=10.888739943951167 (change=22.02753517639265 %)
[2026-01-12 05:11:13] 2026-01-12 10:10:16,002 | INFO     | right removable region: 159
[2026-01-12 05:11:13] 2026-01-12 10:10:16,002 | INFO     | sum of square deviations: 1271395147.9000003
[2026-01-12 05:11:13] 2026-01-12 10:10:16,003 | INFO     | sum of deviations: -195338463314.29996
[2026-01-12 05:11:13] 2026-01-12 10:10:16,003 | INFO     | mean x: 1768207684.525
[2026-01-12 05:11:13] 2026-01-12 10:10:16,003 | INFO     | mean y: 2567614.325
[2026-01-12 05:11:13] 2026-01-12 10:10:16,003 | INFO     | intersect: 271671822044.1184
[2026-01-12 05:11:13] 2026-01-12 10:10:16,004 | INFO     | chi2: 9.784968434847864
[2026-01-12 05:11:13] 2026-01-12 10:10:16,004 | INFO     | current chi2=9.784968434847864 (change=29.931460296274576 %)
[2026-01-12 05:11:13] 2026-01-12 10:10:16,004 | INFO     | sum of square deviations: 1155829602.8774133
[2026-01-12 05:11:13] 2026-01-12 10:10:16,005 | INFO     | sum of deviations: -211354919241.4
[2026-01-12 05:11:13] 2026-01-12 10:10:16,005 | INFO     | mean x: 1768207837.1419356
[2026-01-12 05:11:13] 2026-01-12 10:10:16,005 | INFO     | mean y: 2588419.2
[2026-01-12 05:11:13] 2026-01-12 10:10:16,005 | INFO     | intersect: 323336948164.59656
[2026-01-12 05:11:13] 2026-01-12 10:10:16,005 | INFO     | chi2: 8.475266916883863
[2026-01-12 05:11:13] 2026-01-12 10:10:16,006 | INFO     | current chi2=8.475266916883863 (change=13.384831302057892 %)
[2026-01-12 05:11:13] 2026-01-12 10:10:16,006 | INFO     | left removable region: 20
[2026-01-12 05:11:13] 2026-01-12 10:10:16,006 | INFO     | sum of square deviations: 833911698.5323726
[2026-01-12 05:11:13] 2026-01-12 10:10:16,007 | INFO     | sum of deviations: -145909262112.28784
[2026-01-12 05:11:13] 2026-01-12 10:10:16,007 | INFO     | mean x: 1768207959.4604316
[2026-01-12 05:11:13] 2026-01-12 10:10:16,007 | INFO     | mean y: 2663713.129496403
[2026-01-12 05:11:13] 2026-01-12 10:10:16,007 | INFO     | intersect: 309385442585.2864
[2026-01-12 05:11:13] 2026-01-12 10:10:16,008 | INFO     | chi2: 4.328759553813254
[2026-01-12 05:11:13] 2026-01-12 10:10:16,008 | INFO     | current memory leak: -174.97 B/s (using 139 data points, chi2=4.33)
[2026-01-12 05:11:13] 2026-01-12 10:10:16,008 | INFO     | could have reported an average CPU frequency of 2599 MHz (9 samples)
[2026-01-12 05:11:13] 2026-01-12 10:10:16,008 | INFO     | ..............................
[2026-01-12 05:11:13] 2026-01-12 10:10:16,009 | INFO     | . Timing measurements:
[2026-01-12 05:11:13] 2026-01-12 10:10:16,009 | INFO     | . get job = 0 s
[2026-01-12 05:11:13] 2026-01-12 10:10:16,009 | INFO     | . initial setup = 3 s
[2026-01-12 05:11:13] 2026-01-12 10:10:16,009 | INFO     | . payload setup = 12 s
[2026-01-12 05:11:13] 2026-01-12 10:10:16,009 | INFO     | . stage-in = 0 s
[2026-01-12 05:11:13] 2026-01-12 10:10:16,009 | INFO     | . payload execution = 10030 s
[2026-01-12 05:11:13] 2026-01-12 10:10:16,009 | INFO     | . stage-out = 7 s
[2026-01-12 05:11:13] 2026-01-12 10:10:16,009 | INFO     | . log creation = 3 s
[2026-01-12 05:11:13] 2026-01-12 10:10:16,009 | INFO     | ..............................
[2026-01-12 05:11:13] 2026-01-12 10:10:16,172 | INFO     | 
[2026-01-12 05:11:13] 2026-01-12 10:10:16,172 | INFO     | job summary report
[2026-01-12 05:11:13] 2026-01-12 10:10:16,172 | INFO     | --------------------------------------------------
[2026-01-12 05:11:13] 2026-01-12 10:10:16,172 | INFO     | PanDA job id: 6966779212
[2026-01-12 05:11:13] 2026-01-12 10:10:16,172 | INFO     | task id: 47962010
[2026-01-12 05:11:13] 2026-01-12 10:10:16,173 | INFO     | errors: (none)
[2026-01-12 05:11:13] 2026-01-12 10:10:16,173 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 05:11:13] 2026-01-12 10:10:16,173 | INFO     | pilot state: finished 
[2026-01-12 05:11:13] 2026-01-12 10:10:16,173 | INFO     | transexitcode: 0
[2026-01-12 05:11:13] 2026-01-12 10:10:16,173 | INFO     | exeerrorcode: 0
[2026-01-12 05:11:13] 2026-01-12 10:10:16,173 | INFO     | exeerrordiag: 
[2026-01-12 05:11:13] 2026-01-12 10:10:16,173 | INFO     | exitcode: 0
[2026-01-12 05:11:13] 2026-01-12 10:10:16,173 | INFO     | exitmsg: OK
[2026-01-12 05:11:13] 2026-01-12 10:10:16,173 | INFO     | cpuconsumptiontime: 18249 s
[2026-01-12 05:11:13] 2026-01-12 10:10:16,173 | INFO     | nevents: 50
[2026-01-12 05:11:13] 2026-01-12 10:10:16,173 | INFO     | neventsw: 0
[2026-01-12 05:11:13] 2026-01-12 10:10:16,174 | INFO     | pid: 3209438
[2026-01-12 05:11:13] 2026-01-12 10:10:16,174 | INFO     | pgrp: 3209438
[2026-01-12 05:11:13] 2026-01-12 10:10:16,174 | INFO     | corecount: 12
[2026-01-12 05:11:13] 2026-01-12 10:10:16,174 | INFO     | event service: False
[2026-01-12 05:11:13] 2026-01-12 10:10:16,174 | INFO     | sizes: {0: 2284567, 1: 2284595, 11: 2284857, 12: 2284885, 10047: 2314244, 10055: 2323238, 10060: 2323422, 10111: 2323732}
[2026-01-12 05:11:13] 2026-01-12 10:10:16,174 | INFO     | --------------------------------------------------
[2026-01-12 05:11:13] 2026-01-12 10:10:16,174 | INFO     | 
[2026-01-12 05:11:13] 2026-01-12 10:10:16,174 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-12 05:11:13] 2026-01-12 10:10:16,275 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 05:11:13] 2026-01-12 10:10:16,275 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 05:11:13] 2026-01-12 10:10:16,275 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 05:11:13] 2026-01-12 10:10:16,276 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 05:11:13] 2026-01-12 10:10:16,276 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 05:11:13] 2026-01-12 10:10:16,276 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 05:11:13] 2026-01-12 10:10:16,276 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 05:11:13] 2026-01-12 10:10:16,276 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 05:11:13] 2026-01-12 10:10:16,276 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 05:11:13] 2026-01-12 10:10:16,276 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 05:11:13] 2026-01-12 10:10:16,276 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 05:11:13] 2026-01-12 10:10:16,276 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 05:11:13] 2026-01-12 10:10:16,277 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 05:11:13] 2026-01-12 10:10:16,277 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 05:11:13] 2026-01-12 10:10:16,277 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 05:11:13] 2026-01-12 10:10:16,277 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 05:11:13] 2026-01-12 10:10:16,277 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 05:11:13] 2026-01-12 10:10:16,277 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 05:11:13] 2026-01-12 10:10:16,277 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 05:11:13] 2026-01-12 10:10:16,277 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 05:11:13] 2026-01-12 10:10:16,278 | INFO     | job 6966779212 has completed (purged errors)
[2026-01-12 05:11:13] 2026-01-12 10:10:16,278 | INFO     | overall cleanup function is called
[2026-01-12 05:11:13] 2026-01-12 10:10:17,371 | INFO     | --- collectZombieJob: --- 10, [3209438]
[2026-01-12 05:11:13] 2026-01-12 10:10:17,371 | INFO     | zombie collector waiting for pid 3209438
[2026-01-12 05:11:13] 2026-01-12 10:10:17,371 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 05:11:13] 2026-01-12 10:10:17,371 | INFO     | collected zombie processes
[2026-01-12 05:11:13] 2026-01-12 10:10:17,371 | INFO     | will attempt to kill all subprocesses of pid=3209438
[2026-01-12 05:11:13] 2026-01-12 10:10:19,627 | INFO     | process IDs to be killed: [3209438] (in reverse order)
[2026-01-12 05:11:13] 2026-01-12 10:10:19,882 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 05:11:13] 2026-01-12 10:10:19,882 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 05:11:13] 2026-01-12 10:10:19,907 | INFO     | did not find any defunct processes belonging to 3209438
[2026-01-12 05:11:13] 2026-01-12 10:10:19,935 | INFO     | did not find any defunct processes belonging to 3209438
[2026-01-12 05:11:13] 2026-01-12 10:10:19,940 | INFO     | ready for new job
[2026-01-12 05:11:13] 2026-01-12 10:10:19,940 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 05:11:13] 2026-01-12 10:10:19,942 | INFO     | ***************************************
[2026-01-12 05:11:13] 2026-01-12 10:10:19,942 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 05:11:13] 2026-01-12 10:10:19,942 | INFO     | ***************************************
[2026-01-12 05:11:13] 2026-01-12 10:10:19,942 | INFO     | 
[2026-01-12 05:11:13] 2026-01-12 10:10:19,947 | INFO     | architecture information:
[2026-01-12 05:11:13] 2026-01-12 10:10:19,956 | INFO     | executing command: cat /etc/os-release
[2026-01-12 05:11:13] 2026-01-12 10:10:20,141 | INFO     | cat /etc/os-release:
[2026-01-12 05:11:13] NAME="CentOS Linux"
[2026-01-12 05:11:13] VERSION="7 (Core)"
[2026-01-12 05:11:13] ID="centos"
[2026-01-12 05:11:13] ID_LIKE="rhel fedora"
[2026-01-12 05:11:13] VERSION_ID="7"
[2026-01-12 05:11:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 05:11:13] ANSI_COLOR="0;31"
[2026-01-12 05:11:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 05:11:13] HOME_URL="https://www.centos.org/"
[2026-01-12 05:11:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 05:11:13] 
[2026-01-12 05:11:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 05:11:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 05:11:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 05:11:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 05:11:13] 
[2026-01-12 05:11:13] 2026-01-12 10:10:20,141 | INFO     | ***************************************
[2026-01-12 05:11:13] 2026-01-12 10:10:20,645 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-12 05:11:13] 2026-01-12 10:10:20,693 | INFO     | sufficient remaining disk space (75633786880 B)
[2026-01-12 05:11:13] 2026-01-12 10:10:20,693 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 05:11:13] 2026-01-12 10:10:20,694 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 05:11:13] 2026-01-12 10:10:20,694 | INFO     | update_server=False
[2026-01-12 05:11:13] 2026-01-12 10:10:20,694 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 05:11:13] 2026-01-12 10:10:20,920 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 05:11:13] 2026-01-12 10:10:20,960 | INFO     | all payload control threads have been joined
[2026-01-12 05:11:13] 2026-01-12 10:10:21,013 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 05:11:13] 2026-01-12 10:10:21,013 | INFO     | aborting loop
[2026-01-12 05:11:13] 2026-01-12 10:10:21,198 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 05:11:13] 2026-01-12 10:10:21,277 | INFO     | all job control threads have been joined
[2026-01-12 05:11:13] 2026-01-12 10:10:21,471 | INFO     | all data control threads have been joined
[2026-01-12 05:11:13] 2026-01-12 10:10:21,702 | INFO     | [job] retrieve thread has finished
[2026-01-12 05:11:13] 2026-01-12 10:10:21,944 | INFO     | [job] validate thread has finished
[2026-01-12 05:11:13] 2026-01-12 10:10:22,004 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 05:11:13] 2026-01-12 10:10:22,013 | INFO     | [payload] control thread has finished
[2026-01-12 05:11:13] 2026-01-12 10:10:22,023 | INFO     | [data] copytool_in thread has finished
[2026-01-12 05:11:13] 2026-01-12 10:10:22,026 | INFO     | [job] job monitor thread has finished
[2026-01-12 05:11:13] 2026-01-12 10:10:22,068 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 05:11:13] 2026-01-12 10:10:22,148 | INFO     | [payload] failed_post thread has finished
[2026-01-12 05:11:13] 2026-01-12 10:10:22,173 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 05:11:13] 2026-01-12 10:10:22,180 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 05:11:13] 2026-01-12 10:10:22,196 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 05:11:13] 2026-01-12 10:10:22,208 | INFO     | [job] queue monitor thread has finished
[2026-01-12 05:11:13] 2026-01-12 10:10:22,282 | INFO     | [job] control thread has finished
[2026-01-12 05:11:13] 2026-01-12 10:10:22,301 | INFO     | [payload] validate_post thread has finished
[2026-01-12 05:11:13] 2026-01-12 10:10:22,487 | INFO     | [data] control thread has finished
[2026-01-12 05:11:13] 2026-01-12 10:10:24,076 | INFO     | [data] copytool_out thread has finished
[2026-01-12 05:11:13] 2026-01-12 10:10:24,951 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 05:11:13] 2026-01-12 10:10:40,731 | INFO     | [monitor] cgroup control has ended
[2026-01-12 05:11:13] 2026-01-12 10:10:41,361 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139843584309056)>', '<ExcThread(monitor, started 139843212384000)>']
[2026-01-12 05:11:13] 2026-01-12 10:10:46,387 | INFO     | all workflow threads have been joined
[2026-01-12 05:11:13] 2026-01-12 10:10:46,387 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 05:11:13] 2026-01-12 10:10:46,387 | INFO     | traces error code: 0
[2026-01-12 05:11:13] 2026-01-12 10:10:46,387 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 05:11:13] 2026-01-12 10:10:50,763 | INFO     | PID=3202224 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 05:11:13] 2026-01-12 10:10:50,764 | INFO     | .. there are 21 such processes running
[2026-01-12 05:11:13] 2026-01-12 10:10:50,764 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 05:11:13] 2026-01-12 10:10:50,764 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 05:11:13] 2026-01-12 10:10:50,764 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 05:11:13] 2026-01-12 10:10:50,764 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 05:11:13] 2026-01-12 10:10:50,764 | INFO     | [monitor] control thread has ended
[2026-01-12 05:11:13] 2026-01-12 10:10:51,252 [wrapper] ==== pilot stdout END ====
[2026-01-12 05:11:13] 2026-01-12 10:10:51,274 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 05:11:13] 2026-01-12 10:10:51,372 [wrapper] pilotpid: 3202224
[2026-01-12 05:11:13] 2026-01-12 10:10:51,453 [wrapper] Pilot exit status: 0
[2026-01-12 05:11:13] 2026-01-12 10:10:51,667 [wrapper] pandaids: 6966779212
[2026-01-12 05:11:13] 2026-01-12 10:10:52,836 [wrapper] cleanup supervisor_pilot 3856871 3202225
[2026-01-12 05:11:13] 2026-01-12 10:10:52,894 [wrapper] Test setup, not cleaning
[2026-01-12 05:11:13] 2026-01-12 10:10:52,930 [wrapper] apfmon messages muted
[2026-01-12 05:11:13] 2026-01-12 10:10:52,980 [wrapper] ==== wrapper stdout END ====
[2026-01-12 05:11:13] 2026-01-12 10:10:53,027 [wrapper] ==== wrapper stderr END ====
[2026-01-12 05:11:13]  *** Error codes and diagnostics ***
[2026-01-12 05:11:13]     "exeErrorCode": 0,
[2026-01-12 05:11:13]     "exeErrorDiag": "",
[2026-01-12 05:11:13]     "pilotErrorCode": 0,
[2026-01-12 05:11:13]     "pilotErrorDiag": "",
[2026-01-12 05:11:13]  *** Listing of results directory ***
[2026-01-12 05:11:13] total 440164
[2026-01-12 05:11:13] -rwx------. 1 boincer umatlas     36322 Jan 12 02:20 runpilot2-wrapper.sh
[2026-01-12 05:11:13] -rw-r--r--. 1 boincer umatlas      5112 Jan 12 02:20 queuedata.json
[2026-01-12 05:11:13] -rw-r--r--. 1 boincer umatlas    579449 Jan 12 02:20 pilot3.tar.gz
[2026-01-12 05:11:13] -rw-r--r--. 1 boincer umatlas       100 Jan 12 02:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 05:11:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 12 02:20 run_atlas
[2026-01-12 05:11:13] -rw-r--r--. 1 boincer umatlas       105 Jan 12 02:20 job.xml
[2026-01-12 05:11:13] -rw-r--r--. 2 boincer umatlas 395458336 Jan 12 02:20 EVNT.47962006._000056.pool.root.1
[2026-01-12 05:11:13] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 02:20 start_atlas.sh
[2026-01-12 05:11:13] drwxrwx--x. 2 boincer umatlas      4096 Jan 12 02:20 shared
[2026-01-12 05:11:13] -rw-r--r--. 2 boincer umatlas    592600 Jan 12 02:20 input.tar.gz
[2026-01-12 05:11:13] -rw-r--r--. 1 boincer umatlas         0 Jan 12 02:20 boinc_lockfile
[2026-01-12 05:11:13] -rw-r--r--. 1 boincer umatlas      2888 Jan 12 02:20 pandaJob.out
[2026-01-12 05:11:13] -rw-------. 1 boincer umatlas        57 Jan 12 02:21 setup.sh.local
[2026-01-12 05:11:13] -rw-------. 1 boincer umatlas    987688 Jan 12 02:21 agis_schedconf.cvmfs.json
[2026-01-12 05:11:13] -rw-------. 1 boincer umatlas   1516240 Jan 12 02:21 agis_ddmendpoints.agis.ALL.json
[2026-01-12 05:11:13] drwx------. 5 boincer umatlas      4096 Jan 12 02:21 pilot3
[2026-01-12 05:11:13] -rw-r--r--. 1 boincer umatlas       530 Jan 12 03:45 boinc_task_state.xml
[2026-01-12 05:11:13] -rw-r--r--. 1 boincer umatlas      6658 Jan 12 05:02 init_data.xml
[2026-01-12 05:11:13] -rw-------. 1 boincer umatlas  45250101 Jan 12 05:08 HITS.47962010._003213.pool.root.1
[2026-01-12 05:11:13] -rw-------. 1 boincer umatlas      1046 Jan 12 05:09 memory_monitor_summary.json
[2026-01-12 05:11:13] -rw-------. 1 boincer umatlas   1694895 Jan 12 05:09 log.47962010._003213.job.log.tgz.1
[2026-01-12 05:11:13] -rw-------. 1 boincer umatlas        95 Jan 12 05:09 pilot_heartbeat.json
[2026-01-12 05:11:13] -rw-------. 1 boincer umatlas      8580 Jan 12 05:10 heartbeat.json
[2026-01-12 05:11:13] -rw-------. 1 boincer umatlas       823 Jan 12 05:10 pilotlog.txt
[2026-01-12 05:11:13] -rw-------. 1 boincer umatlas   1358284 Jan 12 05:10 log.47962010._003213.job.log.1
[2026-01-12 05:11:13] -rw-------. 1 boincer umatlas       353 Jan 12 05:10 output.list
[2026-01-12 05:11:13] -rw-r--r--. 1 boincer umatlas       620 Jan 12 05:10 runtime_log
[2026-01-12 05:11:13] -rw-------. 1 boincer umatlas   3072000 Jan 12 05:10 result.tar.gz
[2026-01-12 05:11:13] -rw-r--r--. 1 boincer umatlas      9330 Jan 12 05:10 runtime_log.err
[2026-01-12 05:11:13] -rw-------. 1 boincer umatlas       653 Jan 12 05:10 JaWKDmvORz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmo5mKDmfn8wQm.diag
[2026-01-12 05:11:13] -rw-r--r--. 1 boincer umatlas        27 Jan 12 05:11 wrapper_checkpoint.txt
[2026-01-12 05:11:13] -rw-r--r--. 1 boincer umatlas      8192 Jan 12 05:11 boinc_mmap_file
[2026-01-12 05:11:13] -rw-r--r--. 1 boincer umatlas     21129 Jan 12 05:11 stderr.txt
[2026-01-12 05:11:13] HITS file was successfully produced:
[2026-01-12 05:11:13] -rw-------. 1 boincer umatlas 45250101 Jan 12 05:08 shared/HITS.pool.root.1
[2026-01-12 05:11:13]  *** Contents of shared directory: ***
[2026-01-12 05:11:13] total 433984
[2026-01-12 05:11:13] -rw-r--r--. 2 boincer umatlas 395458336 Jan 12 02:20 ATLAS.root_0
[2026-01-12 05:11:13] -rw-r--r--. 2 boincer umatlas     15847 Jan 12 02:20 start_atlas.sh
[2026-01-12 05:11:13] -rw-r--r--. 2 boincer umatlas    592600 Jan 12 02:20 input.tar.gz
[2026-01-12 05:11:13] -rw-------. 1 boincer umatlas  45250101 Jan 12 05:08 HITS.pool.root.1
[2026-01-12 05:11:13] -rw-------. 1 boincer umatlas   3072000 Jan 12 05:10 result.tar.gz
05:11:15 (3198459): run_atlas exited; CPU time 18418.300093
05:11:15 (3198459): called boinc_finish(0)

</stderr_txt>
]]>

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