Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:15:27 (847070): wrapper (7.7.26015): starting
08:15:27 (847070): wrapper: running run_atlas (--nthreads 4)
[2026-01-12 08:15:27] Arguments: --nthreads 4
[2026-01-12 08:15:27] Threads: 4
[2026-01-12 08:15:27] Checking for CVMFS
[2026-01-12 08:15:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 08:15:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 08:15:29] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 08:15:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 08:15:29] 2.9.2.0 847266 0 30004 155044 3 1 21351785 36864001 0 130560 0 0 0.000 1335 2089 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-12 08:15:29] CVMFS is ok
[2026-01-12 08:15:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-12 08:15:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-12 08:15:29] Further information can be found at the LHC@home message board.
[2026-01-12 08:15:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 08:15:29] Checking for apptainer binary...
[2026-01-12 08:15:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 08:15:29] Running /usr/bin/apptainer --version
[2026-01-12 08:15:29] apptainer version 1.4.1-1.1
[2026-01-12 08:15:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 08:15:29] thA375a
[2026-01-12 08:15:29] apptainer works
[2026-01-12 08:15:29] Set ATHENA_PROC_NUMBER=4
[2026-01-12 08:15:29] Set ATHENA_CORE_NUMBER=4
[2026-01-12 08:15:29] Starting ATLAS job with PandaID=6966776220
[2026-01-12 08:15:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 09:55:52]  *** The last 200 lines of the pilot log: ***
[2026-01-12 09:55:52] 2026-01-12 08:55:11,951 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 09:55:52] 2026-01-12 08:55:12,215 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 09:55:52] 2026-01-12 08:55:12,216 | INFO     | aborting loop
[2026-01-12 09:55:52] 2026-01-12 08:55:12,565 | INFO     | all data control threads have been joined
[2026-01-12 09:55:52] 2026-01-12 08:55:12,937 | INFO     | all payload control threads have been joined
[2026-01-12 09:55:52] 2026-01-12 08:55:12,957 | INFO     | [job] retrieve thread has finished
[2026-01-12 09:55:52] 2026-01-12 08:55:12,966 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 09:55:52] 2026-01-12 08:55:13,092 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 09:55:52] 2026-01-12 08:55:13,193 | INFO     | [payload] validate_post thread has finished
[2026-01-12 09:55:52] 2026-01-12 08:55:13,222 | INFO     | [job] job monitor thread has finished
[2026-01-12 09:55:52] 2026-01-12 08:55:13,489 | INFO     | all job control threads have been joined
[2026-01-12 09:55:52] 2026-01-12 08:55:13,571 | INFO     | [data] control thread has finished
[2026-01-12 09:55:52] 2026-01-12 08:55:13,629 | INFO     | [data] copytool_in thread has finished
[2026-01-12 09:55:52] 2026-01-12 08:55:13,632 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 09:55:52] 2026-01-12 08:55:13,943 | INFO     | [payload] control thread has finished
[2026-01-12 09:55:52] 2026-01-12 08:55:13,957 | INFO     | [data] copytool_out thread has finished
[2026-01-12 09:55:52] 2026-01-12 08:55:14,242 | INFO     | [payload] failed_post thread has finished
[2026-01-12 09:55:52] 2026-01-12 08:55:14,302 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 09:55:52] 2026-01-12 08:55:14,360 | INFO     | [job] validate thread has finished
[2026-01-12 09:55:52] 2026-01-12 08:55:14,495 | INFO     | [job] control thread has finished
[2026-01-12 09:55:52] 2026-01-12 08:55:14,728 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 09:55:52] 2026-01-12 08:55:14,951 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 09:55:52] 2026-01-12 08:55:15,957 | INFO     | [job] queue monitor thread has finished
[2026-01-12 09:55:52] 2026-01-12 08:55:18,735 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 09:55:52] 2026-01-12 08:55:41,636 | INFO     | PID=851409 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-12 09:55:52] 2026-01-12 08:55:41,637 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 09:55:52] 2026-01-12 08:55:41,637 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 09:55:52] 2026-01-12 08:55:41,637 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 09:55:52] 2026-01-12 08:55:46,747 | INFO     | [monitor] cgroup control has ended
[2026-01-12 09:55:52] 2026-01-12 08:55:47,416 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140457275348800)>', '<ExcThread(monitor, started 140455899559680)>']
[2026-01-12 09:55:52] 2026-01-12 08:55:47,669 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 09:55:52] 2026-01-12 08:55:47,669 | INFO     | [monitor] control thread has ended
[2026-01-12 09:55:52] 2026-01-12 08:55:52,441 | INFO     | all workflow threads have been joined
[2026-01-12 09:55:52] 2026-01-12 08:55:52,441 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 09:55:52] 2026-01-12 08:55:52,442 | INFO     | traces error code: 0
[2026-01-12 09:55:52] 2026-01-12 08:55:52,442 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 09:55:52] 2026-01-12 08:55:52,524 [wrapper] ==== pilot stdout END ====
[2026-01-12 09:55:52] 2026-01-12 08:55:52,529 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 09:55:52] 2026-01-12 08:55:52,533 [wrapper] pilotpid: 851409
[2026-01-12 09:55:52] 2026-01-12 08:55:52,537 [wrapper] Pilot exit status: 0
[2026-01-12 09:55:52] 2026-01-12 08:55:52,548 [wrapper] pandaids: 6966776220
[2026-01-12 09:55:52] 2026-01-12 08:55:52,570 [wrapper] cleanup supervisor_pilot  870537 851410
[2026-01-12 09:55:52] 2026-01-12 08:55:52,574 [wrapper] Test setup, not cleaning
[2026-01-12 09:55:52] 2026-01-12 08:55:52,578 [wrapper] apfmon messages muted
[2026-01-12 09:55:52] 2026-01-12 08:55:52,582 [wrapper] ==== wrapper stdout END ====
[2026-01-12 09:55:52] 2026-01-12 08:55:52,585 [wrapper] ==== wrapper stderr END ====
[2026-01-12 09:55:52]  *** Error codes and diagnostics ***
[2026-01-12 09:55:52]     "exeErrorCode": 0,
[2026-01-12 09:55:52]     "exeErrorDiag": "",
[2026-01-12 09:55:52]     "pilotErrorCode": 0,
[2026-01-12 09:55:52]     "pilotErrorDiag": "",
[2026-01-12 09:55:52]  *** Listing of results directory ***
[2026-01-12 09:55:52] total 436196
[2026-01-12 09:55:52] -rw-r--r-- 1 boinc boinc    579449 Jan 12 07:35 pilot3.tar.gz
[2026-01-12 09:55:52] -rwx------ 1 boinc boinc     36322 Jan 12 08:14 runpilot2-wrapper.sh
[2026-01-12 09:55:52] -rw-r--r-- 1 boinc boinc      5112 Jan 12 08:14 queuedata.json
[2026-01-12 09:55:52] -rw-r--r-- 1 boinc boinc       100 Jan 12 08:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 09:55:52] -rwxr-xr-x 1 boinc boinc      7986 Jan 12 08:15 run_atlas
[2026-01-12 09:55:52] -rw-r--r-- 1 boinc boinc       105 Jan 12 08:15 job.xml
[2026-01-12 09:55:52] -rw-r--r-- 2 boinc boinc 225234685 Jan 12 08:15 EVNT.47898824._000987.pool.root.1
[2026-01-12 09:55:52] -rw-r--r-- 2 boinc boinc    592403 Jan 12 08:15 input.tar.gz
[2026-01-12 09:55:52] -rw-r--r-- 2 boinc boinc     15847 Jan 12 08:15 start_atlas.sh
[2026-01-12 09:55:52] drwxrwx--x 2 boinc boinc      4096 Jan 12 08:15 shared
[2026-01-12 09:55:52] -rw-r--r-- 1 boinc boinc         0 Jan 12 08:15 boinc_setup_complete
[2026-01-12 09:55:52] -rw-r--r-- 1 boinc boinc      6378 Jan 12 08:15 init_data.xml
[2026-01-12 09:55:52] -rw-r--r-- 1 boinc boinc         0 Jan 12 08:15 boinc_lockfile
[2026-01-12 09:55:52] -rw-r--r-- 1 boinc boinc      2517 Jan 12 08:15 pandaJob.out
[2026-01-12 09:55:52] -rw------- 1 boinc boinc    987688 Jan 12 08:15 agis_schedconf.cvmfs.json
[2026-01-12 09:55:52] -rw------- 1 boinc boinc   1516240 Jan 12 08:15 agis_ddmendpoints.agis.ALL.json
[2026-01-12 09:55:52] drwx------ 5 boinc boinc      4096 Jan 12 08:15 pilot3
[2026-01-12 09:55:52] -rw------- 1 boinc boinc 215238411 Jan 12 09:54 HITS.47898826._040867.pool.root.1
[2026-01-12 09:55:52] -rw-r--r-- 1 boinc boinc       529 Jan 12 09:54 boinc_task_state.xml
[2026-01-12 09:55:52] -rw------- 1 boinc boinc      1017 Jan 12 09:54 memory_monitor_summary.json
[2026-01-12 09:55:52] -rw------- 1 boinc boinc    286240 Jan 12 09:55 log.47898826._040867.job.log.tgz.1
[2026-01-12 09:55:52] -rw------- 1 boinc boinc      7764 Jan 12 09:55 heartbeat.json
[2026-01-12 09:55:52] -rw------- 1 boinc boinc        95 Jan 12 09:55 pilot_heartbeat.json
[2026-01-12 09:55:52] -rw-r--r-- 1 boinc boinc        27 Jan 12 09:55 wrapper_checkpoint.txt
[2026-01-12 09:55:52] -rw-r--r-- 1 boinc boinc      8192 Jan 12 09:55 boinc_mmap_file
[2026-01-12 09:55:52] -rw------- 1 boinc boinc      4751 Jan 12 09:55 pilotlog.txt
[2026-01-12 09:55:52] -rw------- 1 boinc boinc    863774 Jan 12 09:55 log.47898826._040867.job.log.1
[2026-01-12 09:55:52] -rw------- 1 boinc boinc       357 Jan 12 09:55 output.list
[2026-01-12 09:55:52] -rw-r--r-- 1 boinc boinc       620 Jan 12 09:55 runtime_log
[2026-01-12 09:55:52] -rw------- 1 boinc boinc   1167360 Jan 12 09:55 result.tar.gz
[2026-01-12 09:55:52] -rw-r--r-- 1 boinc boinc      8902 Jan 12 09:55 runtime_log.err
[2026-01-12 09:55:52] -rw------- 1 boinc boinc       660 Jan 12 09:55 9VdNDmOJRz8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmojhKDm2I19Eo.diag
[2026-01-12 09:55:52] -rw-r--r-- 1 boinc boinc      7178 Jan 12 09:55 stderr.txt
[2026-01-12 09:55:52] HITS file was successfully produced:
[2026-01-12 09:55:52] -rw------- 1 boinc boinc 215238411 Jan 12 09:54 shared/HITS.pool.root.1
[2026-01-12 09:55:52]  *** Contents of shared directory: ***
[2026-01-12 09:55:52] total 431896
[2026-01-12 09:55:52] -rw-r--r-- 2 boinc boinc 225234685 Jan 12 08:15 ATLAS.root_0
[2026-01-12 09:55:52] -rw-r--r-- 2 boinc boinc    592403 Jan 12 08:15 input.tar.gz
[2026-01-12 09:55:52] -rw-r--r-- 2 boinc boinc     15847 Jan 12 08:15 start_atlas.sh
[2026-01-12 09:55:52] -rw------- 1 boinc boinc 215238411 Jan 12 09:54 HITS.pool.root.1
[2026-01-12 09:55:52] -rw------- 1 boinc boinc   1167360 Jan 12 09:55 result.tar.gz
09:55:54 (847070): run_atlas exited; CPU time 22693.204626
09:55:54 (847070): called boinc_finish(0)

</stderr_txt>
]]>

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