Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:02:15 (319632): wrapper (7.7.26015): starting
21:02:15 (319632): wrapper: running run_atlas (--nthreads 9)
[2026-01-11 21:02:15] Arguments: --nthreads 9
[2026-01-11 21:02:15] Threads: 9
[2026-01-11 21:02:15] Checking for CVMFS
[2026-01-11 21:02:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 21:02:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 21:02:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 21:02:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 21:02:16] 2.13.3.0 388524 20593 83580 155035 1 1 18104134 32515072 0 16776704 0 3696470 99.978 641247 81604 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-11 21:02:16] CVMFS is ok
[2026-01-11 21:02:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 21:02:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 21:02:16] Further information can be found at the LHC@home message board.
[2026-01-11 21:02:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 21:02:16] Checking for apptainer binary...
[2026-01-11 21:02:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 21:02:16] Running /usr/bin/apptainer --version
[2026-01-11 21:02:16] apptainer version 1.4.5-2.el9
[2026-01-11 21:02:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 21:02:16] c-205-38.aglt2.org
[2026-01-11 21:02:16] apptainer works
[2026-01-11 21:02:16] Set ATHENA_PROC_NUMBER=9
[2026-01-11 21:02:16] Set ATHENA_CORE_NUMBER=9
[2026-01-11 21:02:16] Starting ATLAS job with PandaID=6966591940
[2026-01-11 21:02:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 21:23:29]  *** The last 200 lines of the pilot log: ***
[2026-01-11 21:23:29]  is_altstaged=None
[2026-01-11 21:23:29]  is_tar=False
[2026-01-11 21:23:29]  lfn=log.47962010._003155.job.log.tgz.1
[2026-01-11 21:23:29]  mtime=0
[2026-01-11 21:23:29]  protocol_id=None
[2026-01-11 21:23:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-11 21:23:29]  replicas=None
[2026-01-11 21:23:29]  scope=mc16_13TeV
[2026-01-11 21:23:29]  status=None
[2026-01-11 21:23:29]  status_code=0
[2026-01-11 21:23:29]  storage_token=
[2026-01-11 21:23:29]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6966591940/log.47962010._003155.job.log.tgz.1
[2026-01-11 21:23:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/8c/2a/log.47962010._003155.job.log.tgz.1
[2026-01-11 21:23:29]  workdir=None
[2026-01-11 21:23:29] ]
[2026-01-11 21:23:29] 2026-01-12 02:22:28,423 | INFO     | transferring file log.47962010._003155.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6966591940/log.47962010._003155.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-11 21:23:29] 2026-01-12 02:22:28,423 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6966591940/log.47962010._003155.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._003155.job
[2026-01-11 21:23:29] 2026-01-12 02:22:28,431 | INFO     | adding to output.list: log.47962010._003155.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/8c/2a/log.47962010._003155.job.log.tgz.
[2026-01-11 21:23:29] 2026-01-12 02:22:28,432 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 21:23:29] 2026-01-12 02:22:28,432 | INFO     | summary of transferred files:
[2026-01-11 21:23:29] 2026-01-12 02:22:28,432 | INFO     |  -- lfn=log.47962010._003155.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 21:23:29] 2026-01-12 02:22:28,432 | INFO     | stage-out finished correctly
[2026-01-11 21:23:29] 2026-01-12 02:22:28,536 | INFO     | time since job start (1206s) is within the limit (349056.0s)
[2026-01-11 21:23:29] 2026-01-12 02:22:30,541 | INFO     | time since job start (1208s) is within the limit (349056.0s)
[2026-01-11 21:23:29] 2026-01-12 02:22:30,541 | INFO     | 1210s have passed since pilot start - server update state is 'RUNNING'
[2026-01-11 21:23:29] 2026-01-12 02:22:31,272 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 21:23:29] 2026-01-12 02:22:31,309 | INFO     | job 6966591940 has state=finished
[2026-01-11 21:23:29] 2026-01-12 02:22:31,309 | INFO     | preparing for final server update for job 6966591940 in state='finished'
[2026-01-11 21:23:29] 2026-01-12 02:22:31,309 | INFO     | this job has now completed (state=finished)
[2026-01-11 21:23:29] 2026-01-12 02:22:31,310 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 21:23:29] 2026-01-12 02:22:31,310 | INFO     | log transfer has been attempted: DONE
[2026-01-11 21:23:29] 2026-01-12 02:22:31,310 | INFO     | job 6966591940 has finished - writing final server update
[2026-01-11 21:23:29] 2026-01-12 02:22:31,310 | INFO     | total number of processed events: 50 (read)
[2026-01-11 21:23:29] 2026-01-12 02:22:31,310 | INFO     | executing command: lscpu
[2026-01-11 21:23:29] 2026-01-12 02:22:31,323 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 21:23:29] 2026-01-12 02:22:32,025 | WARNING  | process 329694 can no longer be monitored (due to stat problems) - aborting
[2026-01-11 21:23:29] 2026-01-12 02:22:32,026 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966591940/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 21:23:29] 2026-01-12 02:22:32,083 | INFO     | number of running child processes to parent process 329694: 1
[2026-01-11 21:23:29] 2026-01-12 02:22:32,083 | INFO     | maximum number of monitored processes: 14
[2026-01-11 21:23:29] 2026-01-12 02:22:32,546 | INFO     | time since job start (1210s) is within the limit (349056.0s)
[2026-01-11 21:23:29] 2026-01-12 02:22:33,227 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 21:23:29] 2026-01-12 02:22:33,229 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2663.1297500000005
[2026-01-11 21:23:29] 2026-01-12 02:22:33,230 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966591940/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 21:23:29] 2026-01-12 02:22:33,230 | INFO     | extracted standard info from prmon json
[2026-01-11 21:23:29] 2026-01-12 02:22:33,231 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 21:23:29] 2026-01-12 02:22:33,231 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 21:23:29] 2026-01-12 02:22:33,231 | INFO     | fitting pss+swap vs Time
[2026-01-11 21:23:29] 2026-01-12 02:22:33,231 | INFO     | sum of square deviations: 677222.0
[2026-01-11 21:23:29] 2026-01-12 02:22:33,232 | INFO     | sum of deviations: -690982441.0
[2026-01-11 21:23:29] 2026-01-12 02:22:33,232 | INFO     | mean x: 1768184031.0
[2026-01-11 21:23:29] 2026-01-12 02:22:33,232 | INFO     | mean y: 2777904.846153846
[2026-01-11 21:23:29] 2026-01-12 02:22:33,232 | INFO     | intersect: 1804114454545.0022
[2026-01-11 21:23:29] 2026-01-12 02:22:33,232 | INFO     | chi2: 0.10563688941854849
[2026-01-11 21:23:29] 2026-01-12 02:22:33,232 | INFO     | current memory leak: -1020.32 B/s (using 13 data points, chi2=0.11)
[2026-01-11 21:23:29] 2026-01-12 02:22:33,232 | INFO     | could have reported an average CPU frequency of 2770 MHz (4 samples)
[2026-01-11 21:23:29] 2026-01-12 02:22:33,232 | INFO     | ..............................
[2026-01-11 21:23:29] 2026-01-12 02:22:33,232 | INFO     | . Timing measurements:
[2026-01-11 21:23:29] 2026-01-12 02:22:33,233 | INFO     | . get job = 0 s
[2026-01-11 21:23:29] 2026-01-12 02:22:33,233 | INFO     | . initial setup = 2 s
[2026-01-11 21:23:29] 2026-01-12 02:22:33,233 | INFO     | . payload setup = 2 s
[2026-01-11 21:23:29] 2026-01-12 02:22:33,233 | INFO     | . stage-in = 0 s
[2026-01-11 21:23:29] 2026-01-12 02:22:33,233 | INFO     | . payload execution = 1186 s
[2026-01-11 21:23:29] 2026-01-12 02:22:33,233 | INFO     | . stage-out = 0 s
[2026-01-11 21:23:29] 2026-01-12 02:22:33,233 | INFO     | . log creation = 0 s
[2026-01-11 21:23:29] 2026-01-12 02:22:33,233 | INFO     | ..............................
[2026-01-11 21:23:29] 2026-01-12 02:22:33,667 | INFO     | 
[2026-01-11 21:23:29] 2026-01-12 02:22:33,668 | INFO     | job summary report
[2026-01-11 21:23:29] 2026-01-12 02:22:33,668 | INFO     | --------------------------------------------------
[2026-01-11 21:23:29] 2026-01-12 02:22:33,668 | INFO     | PanDA job id: 6966591940
[2026-01-11 21:23:29] 2026-01-12 02:22:33,668 | INFO     | task id: 47962010
[2026-01-11 21:23:29] 2026-01-12 02:22:33,668 | INFO     | errors: (none)
[2026-01-11 21:23:29] 2026-01-12 02:22:33,668 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 21:23:29] 2026-01-12 02:22:33,668 | INFO     | pilot state: finished 
[2026-01-11 21:23:29] 2026-01-12 02:22:33,668 | INFO     | transexitcode: 0
[2026-01-11 21:23:29] 2026-01-12 02:22:33,668 | INFO     | exeerrorcode: 0
[2026-01-11 21:23:29] 2026-01-12 02:22:33,668 | INFO     | exeerrordiag: 
[2026-01-11 21:23:29] 2026-01-12 02:22:33,668 | INFO     | exitcode: 0
[2026-01-11 21:23:29] 2026-01-12 02:22:33,668 | INFO     | exitmsg: OK
[2026-01-11 21:23:29] 2026-01-12 02:22:33,668 | INFO     | cpuconsumptiontime: 8131 s
[2026-01-11 21:23:29] 2026-01-12 02:22:33,668 | INFO     | nevents: 50
[2026-01-11 21:23:29] 2026-01-12 02:22:33,668 | INFO     | neventsw: 0
[2026-01-11 21:23:29] 2026-01-12 02:22:33,668 | INFO     | pid: 329694
[2026-01-11 21:23:29] 2026-01-12 02:22:33,668 | INFO     | pgrp: 329694
[2026-01-11 21:23:29] 2026-01-12 02:22:33,669 | INFO     | corecount: 9
[2026-01-11 21:23:29] 2026-01-12 02:22:33,669 | INFO     | event service: False
[2026-01-11 21:23:29] 2026-01-12 02:22:33,669 | INFO     | sizes: {0: 2284397, 1: 2284596, 3: 2284858, 11: 2284886, 1192: 2310298, 1193: 2319475, 1196: 2319475, 1198: 2319721}
[2026-01-11 21:23:29] 2026-01-12 02:22:33,669 | INFO     | --------------------------------------------------
[2026-01-11 21:23:29] 2026-01-12 02:22:33,669 | INFO     | 
[2026-01-11 21:23:29] 2026-01-12 02:22:33,669 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 21:23:29] 2026-01-12 02:22:33,677 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 21:23:29] 2026-01-12 02:22:33,677 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 21:23:29] 2026-01-12 02:22:33,677 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 21:23:29] 2026-01-12 02:22:33,678 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 21:23:29] 2026-01-12 02:22:33,678 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 21:23:29] 2026-01-12 02:22:33,678 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 21:23:29] 2026-01-12 02:22:33,678 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 21:23:29] 2026-01-12 02:22:33,678 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 21:23:29] 2026-01-12 02:22:33,678 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 21:23:29] 2026-01-12 02:22:33,678 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 21:23:29] 2026-01-12 02:22:33,678 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 21:23:29] 2026-01-12 02:22:33,678 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 21:23:29] 2026-01-12 02:22:33,678 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 21:23:29] 2026-01-12 02:22:33,678 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 21:23:29] 2026-01-12 02:22:33,678 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 21:23:29] 2026-01-12 02:22:33,678 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 21:23:29] 2026-01-12 02:22:33,678 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 21:23:29] 2026-01-12 02:22:33,678 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 21:23:29] 2026-01-12 02:22:33,678 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 21:23:29] 2026-01-12 02:22:33,678 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 21:23:29] 2026-01-12 02:22:33,678 | INFO     | job 6966591940 has completed (purged errors)
[2026-01-11 21:23:29] 2026-01-12 02:22:33,679 | INFO     | overall cleanup function is called
[2026-01-11 21:23:29] 2026-01-12 02:22:34,688 | INFO     | --- collectZombieJob: --- 10, [329694]
[2026-01-11 21:23:29] 2026-01-12 02:22:34,689 | INFO     | zombie collector waiting for pid 329694
[2026-01-11 21:23:29] 2026-01-12 02:22:34,689 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 21:23:29] 2026-01-12 02:22:34,689 | INFO     | collected zombie processes
[2026-01-11 21:23:29] 2026-01-12 02:22:34,689 | INFO     | will attempt to kill all subprocesses of pid=329694
[2026-01-11 21:23:29] 2026-01-12 02:22:34,749 | INFO     | process IDs to be killed: [329694] (in reverse order)
[2026-01-11 21:23:29] 2026-01-12 02:22:34,768 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 21:23:29] 2026-01-12 02:22:34,768 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 21:23:29] 2026-01-12 02:22:34,770 | INFO     | did not find any defunct processes belonging to 329694
[2026-01-11 21:23:29] 2026-01-12 02:22:34,771 | INFO     | did not find any defunct processes belonging to 329694
[2026-01-11 21:23:29] 2026-01-12 02:22:34,771 | INFO     | ready for new job
[2026-01-11 21:23:29] 2026-01-12 02:22:34,771 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 21:23:29] 2026-01-12 02:22:34,772 | INFO     | ***************************************
[2026-01-11 21:23:29] 2026-01-12 02:22:34,772 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 21:23:29] 2026-01-12 02:22:34,772 | INFO     | ***************************************
[2026-01-11 21:23:29] 2026-01-12 02:22:34,772 | INFO     | 
[2026-01-11 21:23:29] 2026-01-12 02:22:34,773 | INFO     | architecture information:
[2026-01-11 21:23:29] 2026-01-12 02:22:34,773 | INFO     | executing command: cat /etc/os-release
[2026-01-11 21:23:29] 2026-01-12 02:22:34,778 | INFO     | cat /etc/os-release:
[2026-01-11 21:23:29] NAME="CentOS Linux"
[2026-01-11 21:23:29] VERSION="7 (Core)"
[2026-01-11 21:23:29] ID="centos"
[2026-01-11 21:23:29] ID_LIKE="rhel fedora"
[2026-01-11 21:23:29] VERSION_ID="7"
[2026-01-11 21:23:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 21:23:29] ANSI_COLOR="0;31"
[2026-01-11 21:23:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 21:23:29] HOME_URL="https://www.centos.org/"
[2026-01-11 21:23:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 21:23:29] 
[2026-01-11 21:23:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 21:23:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 21:23:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 21:23:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 21:23:29] 
[2026-01-11 21:23:29] 2026-01-12 02:22:34,779 | INFO     | ***************************************
[2026-01-11 21:23:29] 2026-01-12 02:22:35,281 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 21:23:29] 2026-01-12 02:22:35,287 | INFO     | sufficient remaining disk space (20869808128 B)
[2026-01-11 21:23:29] 2026-01-12 02:22:35,288 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 21:23:29] 2026-01-12 02:22:35,288 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 21:23:29] 2026-01-12 02:22:35,288 | INFO     | update_server=False
[2026-01-11 21:23:29] 2026-01-12 02:22:35,288 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 21:23:29] 2026-01-12 02:22:35,407 | INFO     | all payload control threads have been joined
[2026-01-11 21:23:29] 2026-01-12 02:22:35,508 | INFO     | all data control threads have been joined
[2026-01-11 21:23:29] 2026-01-12 02:22:35,591 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 21:23:29] 2026-01-12 02:22:35,591 | INFO     | aborting loop
[2026-01-11 21:23:29] 2026-01-12 02:22:36,293 | INFO     | [job] retrieve thread has finished
[2026-01-11 21:23:29] 2026-01-12 02:22:36,302 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 21:23:29] 2026-01-12 02:22:36,371 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 21:23:29] 2026-01-12 02:22:36,412 | INFO     | [payload] control thread has finished
[2026-01-11 21:23:29] 2026-01-12 02:22:36,480 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 21:23:29] 2026-01-12 02:22:36,513 | INFO     | [data] control thread has finished
[2026-01-11 21:23:29] 2026-01-12 02:22:36,516 | INFO     | [payload] failed_post thread has finished
[2026-01-11 21:23:29] 2026-01-12 02:22:36,597 | INFO     | [job] job monitor thread has finished
[2026-01-11 21:23:29] 2026-01-12 02:22:36,853 | INFO     | [data] copytool_in thread has finished
[2026-01-11 21:23:29] 2026-01-12 02:22:36,978 | INFO     | all job control threads have been joined
[2026-01-11 21:23:29] 2026-01-12 02:22:37,077 | INFO     | [payload] validate_post thread has finished
[2026-01-11 21:23:29] 2026-01-12 02:22:37,314 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 21:23:29] 2026-01-12 02:22:37,652 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 21:23:29] 2026-01-12 02:22:37,690 | INFO     | [job] validate thread has finished
[2026-01-11 21:23:29] 2026-01-12 02:22:37,983 | INFO     | [job] control thread has finished
[2026-01-11 21:23:29] 2026-01-12 02:22:38,286 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 21:23:29] 2026-01-12 02:22:38,486 | INFO     | [data] copytool_out thread has finished
[2026-01-11 21:23:29] 2026-01-12 02:22:39,292 | INFO     | [job] queue monitor thread has finished
[2026-01-11 21:23:29] 2026-01-12 02:22:41,319 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 21:23:29] 2026-01-12 02:22:45,891 | INFO     | job.realtimelogging is not enabled
[2026-01-11 21:23:29] 2026-01-12 02:22:46,896 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 21:23:29] 2026-01-12 02:23:05,694 | INFO     | PID=323333 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 21:23:29] 2026-01-12 02:23:05,694 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 21:23:29] 2026-01-12 02:23:05,694 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 21:23:29] 2026-01-12 02:23:05,694 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 21:23:29] 2026-01-12 02:23:23,533 | INFO     | [monitor] cgroup control has ended
[2026-01-11 21:23:29] 2026-01-12 02:23:24,538 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140378976163648)>', '<ExcThread(monitor, started 140378606900992)>']
[2026-01-11 21:23:29] 2026-01-12 02:23:24,788 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 21:23:29] 2026-01-12 02:23:24,788 | INFO     | [monitor] control thread has ended
[2026-01-11 21:23:29] 2026-01-12 02:23:29,564 | INFO     | all workflow threads have been joined
[2026-01-11 21:23:29] 2026-01-12 02:23:29,564 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 21:23:29] 2026-01-12 02:23:29,564 | INFO     | traces error code: 0
[2026-01-11 21:23:29] 2026-01-12 02:23:29,564 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 21:23:29] 2026-01-12 02:23:29,617 [wrapper] ==== pilot stdout END ====
[2026-01-11 21:23:29] 2026-01-12 02:23:29,619 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 21:23:29] 2026-01-12 02:23:29,620 [wrapper] pilotpid: 323333
[2026-01-11 21:23:29] 2026-01-12 02:23:29,621 [wrapper] Pilot exit status: 0
[2026-01-11 21:23:29] 2026-01-12 02:23:29,626 [wrapper] pandaids: 6966591940
[2026-01-11 21:23:29] 2026-01-12 02:23:29,639 [wrapper] cleanup supervisor_pilot  342465 323334
[2026-01-11 21:23:29] 2026-01-12 02:23:29,641 [wrapper] Test setup, not cleaning
[2026-01-11 21:23:29] 2026-01-12 02:23:29,642 [wrapper] apfmon messages muted
[2026-01-11 21:23:29] 2026-01-12 02:23:29,644 [wrapper] ==== wrapper stdout END ====
[2026-01-11 21:23:29] 2026-01-12 02:23:29,645 [wrapper] ==== wrapper stderr END ====
[2026-01-11 21:23:29]  *** Error codes and diagnostics ***
[2026-01-11 21:23:29]     "exeErrorCode": 0,
[2026-01-11 21:23:29]     "exeErrorDiag": "",
[2026-01-11 21:23:29]     "pilotErrorCode": 0,
[2026-01-11 21:23:29]     "pilotErrorDiag": "",
[2026-01-11 21:23:29]  *** Listing of results directory ***
[2026-01-11 21:23:29] total 434760
[2026-01-11 21:23:29] -rw-r--r--. 1 boincer umatlas    579449 Jan 11 20:37 pilot3.tar.gz
[2026-01-11 21:23:29] -rwx------. 1 boincer umatlas     36322 Jan 11 21:01 runpilot2-wrapper.sh
[2026-01-11 21:23:29] -rw-r--r--. 1 boincer umatlas      5112 Jan 11 21:01 queuedata.json
[2026-01-11 21:23:29] -rw-r--r--. 1 boincer umatlas       100 Jan 11 21:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 21:23:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 21:02 run_atlas
[2026-01-11 21:23:29] -rw-r--r--. 1 boincer umatlas       105 Jan 11 21:02 job.xml
[2026-01-11 21:23:29] -rw-r--r--. 2 boincer umatlas 391872885 Jan 11 21:02 EVNT.47962006._000119.pool.root.1
[2026-01-11 21:23:29] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 21:02 start_atlas.sh
[2026-01-11 21:23:29] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 21:02 shared
[2026-01-11 21:23:29] -rw-r--r--. 2 boincer umatlas    592611 Jan 11 21:02 input.tar.gz
[2026-01-11 21:23:29] -rw-r--r--. 1 boincer umatlas         0 Jan 11 21:02 boinc_lockfile
[2026-01-11 21:23:29] -rw-r--r--. 1 boincer umatlas      2889 Jan 11 21:02 pandaJob.out
[2026-01-11 21:23:29] -rw-------. 1 boincer umatlas    990074 Jan 11 21:02 agis_schedconf.cvmfs.json
[2026-01-11 21:23:29] -rw-------. 1 boincer umatlas   1516240 Jan 11 21:02 agis_ddmendpoints.agis.ALL.json
[2026-01-11 21:23:29] drwx------. 5 boincer umatlas      4096 Jan 11 21:02 pilot3
[2026-01-11 21:23:29] -rw-r--r--. 1 boincer umatlas       527 Jan 11 21:17 boinc_task_state.xml
[2026-01-11 21:23:29] -rw-r--r--. 1 boincer umatlas      6527 Jan 11 21:18 init_data.xml
[2026-01-11 21:23:29] -rw-------. 1 boincer umatlas  46472229 Jan 11 21:22 HITS.47962010._003155.pool.root.1
[2026-01-11 21:23:29] -rw-------. 1 boincer umatlas      1021 Jan 11 21:22 memory_monitor_summary.json
[2026-01-11 21:23:29] -rw-------. 1 boincer umatlas        95 Jan 11 21:22 pilot_heartbeat.json
[2026-01-11 21:23:29] -rw-------. 1 boincer umatlas   1241724 Jan 11 21:22 log.47962010._003155.job.log.tgz.1
[2026-01-11 21:23:29] -rw-------. 1 boincer umatlas      8569 Jan 11 21:22 heartbeat.json
[2026-01-11 21:23:29] -rw-r--r--. 1 boincer umatlas        26 Jan 11 21:23 wrapper_checkpoint.txt
[2026-01-11 21:23:29] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 21:23 boinc_mmap_file
[2026-01-11 21:23:29] -rw-------. 1 boincer umatlas      4819 Jan 11 21:23 pilotlog.txt
[2026-01-11 21:23:29] -rw-------. 1 boincer umatlas    223659 Jan 11 21:23 log.47962010._003155.job.log.1
[2026-01-11 21:23:29] -rw-------. 1 boincer umatlas       353 Jan 11 21:23 output.list
[2026-01-11 21:23:29] -rw-r--r--. 1 boincer umatlas       620 Jan 11 21:23 runtime_log
[2026-01-11 21:23:29] -rw-------. 1 boincer umatlas   1484800 Jan 11 21:23 result.tar.gz
[2026-01-11 21:23:29] -rw-r--r--. 1 boincer umatlas      8817 Jan 11 21:23 runtime_log.err
[2026-01-11 21:23:29] -rw-------. 1 boincer umatlas       649 Jan 11 21:23 qc0MDmjQMz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmr4mKDmSYyaWo.diag
[2026-01-11 21:23:29] -rw-r--r--. 1 boincer umatlas     21559 Jan 11 21:23 stderr.txt
[2026-01-11 21:23:29] HITS file was successfully produced:
[2026-01-11 21:23:29] -rw-------. 1 boincer umatlas 46472229 Jan 11 21:22 shared/HITS.pool.root.1
[2026-01-11 21:23:29]  *** Contents of shared directory: ***
[2026-01-11 21:23:29] total 430128
[2026-01-11 21:23:29] -rw-r--r--. 2 boincer umatlas 391872885 Jan 11 21:02 ATLAS.root_0
[2026-01-11 21:23:29] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 21:02 start_atlas.sh
[2026-01-11 21:23:29] -rw-r--r--. 2 boincer umatlas    592611 Jan 11 21:02 input.tar.gz
[2026-01-11 21:23:29] -rw-------. 1 boincer umatlas  46472229 Jan 11 21:22 HITS.pool.root.1
[2026-01-11 21:23:29] -rw-------. 1 boincer umatlas   1484800 Jan 11 21:23 result.tar.gz
21:23:31 (319632): run_atlas exited; CPU time 8117.219014
21:23:31 (319632): called boinc_finish(0)

</stderr_txt>
]]>

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