Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:53:30 (3435772): wrapper (7.7.26015): starting
20:53:30 (3435772): wrapper: running run_atlas (--nthreads 9)
[2026-01-11 20:53:30] Arguments: --nthreads 9
[2026-01-11 20:53:30] Threads: 9
[2026-01-11 20:53:30] Checking for CVMFS
[2026-01-11 20:53:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 20:53:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 20:53:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 20:53:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 20:53:31] 2.13.3.0 7347 26560 158608 155035 3 124 30195290 40960000 10511 16776704 0 42352472 99.799 18859952 40325 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-11 20:53:31] CVMFS is ok
[2026-01-11 20:53:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 20:53:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 20:53:31] Further information can be found at the LHC@home message board.
[2026-01-11 20:53:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 20:53:31] Checking for apptainer binary...
[2026-01-11 20:53:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 20:53:31] Running /usr/bin/apptainer --version
[2026-01-11 20:53:31] apptainer version 1.4.5-2.el9
[2026-01-11 20:53:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 20:53:31] c-212-2.aglt2.org
[2026-01-11 20:53:31] apptainer works
[2026-01-11 20:53:31] Set ATHENA_PROC_NUMBER=9
[2026-01-11 20:53:31] Set ATHENA_CORE_NUMBER=9
[2026-01-11 20:53:31] Starting ATLAS job with PandaID=6966588200
[2026-01-11 20:53:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 23:41:07]  *** The last 200 lines of the pilot log: ***
[2026-01-11 23:41:07] 2026-01-12 04:40:30,035 | INFO     | executing command: lscpu
[2026-01-11 23:41:07] 2026-01-12 04:40:30,100 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 23:41:07] 2026-01-12 04:40:30,346 | INFO     | monitor loop #680: job 0:6966588200 is in state 'finished'
[2026-01-11 23:41:07] 2026-01-12 04:40:30,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 23:41:07] 2026-01-12 04:40:31,496 | INFO     | time since job start (10008s) is within the limit (349056.0s)
[2026-01-11 23:41:07] 2026-01-12 04:40:32,849 | INFO     | monitor loop #681: job 0:6966588200 is in state 'finished'
[2026-01-11 23:41:07] 2026-01-12 04:40:32,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 23:41:07] 2026-01-12 04:40:33,497 | INFO     | time since job start (10010s) is within the limit (349056.0s)
[2026-01-11 23:41:07] 2026-01-12 04:40:33,749 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 23:41:07] 2026-01-12 04:40:33,754 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3231.9628020833334
[2026-01-11 23:41:07] 2026-01-12 04:40:33,766 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966588200/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 23:41:07] 2026-01-12 04:40:33,767 | INFO     | extracted standard info from prmon json
[2026-01-11 23:41:07] 2026-01-12 04:40:33,767 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 23:41:07] 2026-01-12 04:40:33,767 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 23:41:07] 2026-01-12 04:40:33,768 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 23:41:07] 2026-01-12 04:40:33,768 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 23:41:07] 2026-01-12 04:40:33,770 | INFO     | fitting pss+swap vs Time
[2026-01-11 23:41:07] 2026-01-12 04:40:33,771 | INFO     | sum of square deviations: 1367705226.3902426
[2026-01-11 23:41:07] 2026-01-12 04:40:33,771 | INFO     | sum of deviations: -9525203003.487806
[2026-01-11 23:41:07] 2026-01-12 04:40:33,771 | INFO     | mean x: 1768187822.5609756
[2026-01-11 23:41:07] 2026-01-12 04:40:33,771 | INFO     | mean y: 2613744.548780488
[2026-01-11 23:41:07] 2026-01-12 04:40:33,771 | INFO     | intersect: 12316925069.248508
[2026-01-11 23:41:07] 2026-01-12 04:40:33,772 | INFO     | chi2: 1.3325913002880612
[2026-01-11 23:41:07] 2026-01-12 04:40:33,772 | INFO     | sum of square deviations: 1246385071.3710754
[2026-01-11 23:41:07] 2026-01-12 04:40:33,772 | INFO     | sum of deviations: -9131244277.062895
[2026-01-11 23:41:07] 2026-01-12 04:40:33,772 | INFO     | mean x: 1768187670.0628932
[2026-01-11 23:41:07] 2026-01-12 04:40:33,772 | INFO     | mean y: 2614240.006289308
[2026-01-11 23:41:07] 2026-01-12 04:40:33,773 | INFO     | intersect: 12956679491.505144
[2026-01-11 23:41:07] 2026-01-12 04:40:33,773 | INFO     | chi2: 1.3312119213714677
[2026-01-11 23:41:07] 2026-01-12 04:40:33,773 | INFO     | current chi2=1.3312119213714677 (change=0.10351102519544286 %)
[2026-01-11 23:41:07] 2026-01-12 04:40:33,773 | INFO     | right removable region: 158
[2026-01-11 23:41:07] 2026-01-12 04:40:33,773 | INFO     | sum of square deviations: 1246378971.3710754
[2026-01-11 23:41:07] 2026-01-12 04:40:33,774 | INFO     | sum of deviations: -26561661680.471687
[2026-01-11 23:41:07] 2026-01-12 04:40:33,774 | INFO     | mean x: 1768187975.0628932
[2026-01-11 23:41:07] 2026-01-12 04:40:33,774 | INFO     | mean y: 2634733.547169811
[2026-01-11 23:41:07] 2026-01-12 04:40:33,774 | INFO     | intersect: 37684601342.333954
[2026-01-11 23:41:07] 2026-01-12 04:40:33,774 | INFO     | chi2: 0.2290797356548737
[2026-01-11 23:41:07] 2026-01-12 04:40:33,774 | INFO     | current chi2=0.2290797356548737 (change=82.80945286035153 %)
[2026-01-11 23:41:07] 2026-01-12 04:40:33,774 | INFO     | sum of square deviations: 1132448203.8506494
[2026-01-11 23:41:07] 2026-01-12 04:40:33,775 | INFO     | sum of deviations: -21059101646.40909
[2026-01-11 23:41:07] 2026-01-12 04:40:33,775 | INFO     | mean x: 1768188127.564935
[2026-01-11 23:41:07] 2026-01-12 04:40:33,775 | INFO     | mean y: 2627305.590909091
[2026-01-11 23:41:07] 2026-01-12 04:40:33,775 | INFO     | intersect: 32884001819.45307
[2026-01-11 23:41:07] 2026-01-12 04:40:33,775 | INFO     | chi2: 0.20567740111158336
[2026-01-11 23:41:07] 2026-01-12 04:40:33,775 | INFO     | current chi2=0.20567740111158336 (change=10.215803015657286 %)
[2026-01-11 23:41:07] 2026-01-12 04:40:33,775 | INFO     | left removable region: 20
[2026-01-11 23:41:07] 2026-01-12 04:40:33,775 | INFO     | sum of square deviations: 814874699.913043
[2026-01-11 23:41:07] 2026-01-12 04:40:33,776 | INFO     | sum of deviations: -3997867525.3478246
[2026-01-11 23:41:07] 2026-01-12 04:40:33,776 | INFO     | mean x: 1768188249.5652175
[2026-01-11 23:41:07] 2026-01-12 04:40:33,776 | INFO     | mean y: 2602408.927536232
[2026-01-11 23:41:07] 2026-01-12 04:40:33,776 | INFO     | intersect: 8677534128.359669
[2026-01-11 23:41:07] 2026-01-12 04:40:33,776 | INFO     | chi2: 0.06793100860319931
[2026-01-11 23:41:07] 2026-01-12 04:40:33,776 | INFO     | current memory leak: -4.91 B/s (using 138 data points, chi2=0.07)
[2026-01-11 23:41:07] 2026-01-12 04:40:33,777 | INFO     | could have reported an average CPU frequency of 3234 MHz (9 samples)
[2026-01-11 23:41:07] 2026-01-12 04:40:33,777 | INFO     | ..............................
[2026-01-11 23:41:07] 2026-01-12 04:40:33,777 | INFO     | . Timing measurements:
[2026-01-11 23:41:07] 2026-01-12 04:40:33,777 | INFO     | . get job = 0 s
[2026-01-11 23:41:07] 2026-01-12 04:40:33,777 | INFO     | . initial setup = 2 s
[2026-01-11 23:41:07] 2026-01-12 04:40:33,777 | INFO     | . payload setup = 6 s
[2026-01-11 23:41:07] 2026-01-12 04:40:33,777 | INFO     | . stage-in = 0 s
[2026-01-11 23:41:07] 2026-01-12 04:40:33,777 | INFO     | . payload execution = 9979 s
[2026-01-11 23:41:07] 2026-01-12 04:40:33,777 | INFO     | . stage-out = 0 s
[2026-01-11 23:41:07] 2026-01-12 04:40:33,777 | INFO     | . log creation = 0 s
[2026-01-11 23:41:07] 2026-01-12 04:40:33,777 | INFO     | ..............................
[2026-01-11 23:41:07] 2026-01-12 04:40:33,848 | INFO     | 
[2026-01-11 23:41:07] 2026-01-12 04:40:33,848 | INFO     | job summary report
[2026-01-11 23:41:07] 2026-01-12 04:40:33,848 | INFO     | --------------------------------------------------
[2026-01-11 23:41:07] 2026-01-12 04:40:33,848 | INFO     | PanDA job id: 6966588200
[2026-01-11 23:41:07] 2026-01-12 04:40:33,849 | INFO     | task id: 47898826
[2026-01-11 23:41:07] 2026-01-12 04:40:33,849 | INFO     | errors: (none)
[2026-01-11 23:41:07] 2026-01-12 04:40:33,849 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 23:41:07] 2026-01-12 04:40:33,849 | INFO     | pilot state: finished 
[2026-01-11 23:41:07] 2026-01-12 04:40:33,849 | INFO     | transexitcode: 0
[2026-01-11 23:41:07] 2026-01-12 04:40:33,849 | INFO     | exeerrorcode: 0
[2026-01-11 23:41:07] 2026-01-12 04:40:33,849 | INFO     | exeerrordiag: 
[2026-01-11 23:41:07] 2026-01-12 04:40:33,849 | INFO     | exitcode: 0
[2026-01-11 23:41:07] 2026-01-12 04:40:33,849 | INFO     | exitmsg: OK
[2026-01-11 23:41:07] 2026-01-12 04:40:33,849 | INFO     | cpuconsumptiontime: 47312 s
[2026-01-11 23:41:07] 2026-01-12 04:40:33,849 | INFO     | nevents: 400
[2026-01-11 23:41:07] 2026-01-12 04:40:33,849 | INFO     | neventsw: 0
[2026-01-11 23:41:07] 2026-01-12 04:40:33,849 | INFO     | pid: 3446208
[2026-01-11 23:41:07] 2026-01-12 04:40:33,849 | INFO     | pgrp: 3446208
[2026-01-11 23:41:07] 2026-01-12 04:40:33,849 | INFO     | corecount: 9
[2026-01-11 23:41:07] 2026-01-12 04:40:33,849 | INFO     | event service: False
[2026-01-11 23:41:07] 2026-01-12 04:40:33,849 | INFO     | sizes: {0: 2283918, 5: 2284180, 11: 2284236, 9989: 2313098, 9990: 2322152, 9994: 2322354}
[2026-01-11 23:41:07] 2026-01-12 04:40:33,850 | INFO     | --------------------------------------------------
[2026-01-11 23:41:07] 2026-01-12 04:40:33,850 | INFO     | 
[2026-01-11 23:41:07] 2026-01-12 04:40:33,850 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 23:41:07] 2026-01-12 04:40:33,873 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 23:41:07] 2026-01-12 04:40:33,873 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 23:41:07] 2026-01-12 04:40:33,873 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 23:41:07] 2026-01-12 04:40:33,873 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 23:41:07] 2026-01-12 04:40:33,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 23:41:07] 2026-01-12 04:40:33,874 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 23:41:07] 2026-01-12 04:40:33,874 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 23:41:07] 2026-01-12 04:40:33,874 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 23:41:07] 2026-01-12 04:40:33,874 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 23:41:07] 2026-01-12 04:40:33,874 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 23:41:07] 2026-01-12 04:40:33,874 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 23:41:07] 2026-01-12 04:40:33,874 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 23:41:07] 2026-01-12 04:40:33,874 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 23:41:07] 2026-01-12 04:40:33,874 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 23:41:07] 2026-01-12 04:40:33,874 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 23:41:07] 2026-01-12 04:40:33,874 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 23:41:07] 2026-01-12 04:40:33,874 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 23:41:07] 2026-01-12 04:40:33,874 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 23:41:07] 2026-01-12 04:40:33,875 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 23:41:07] 2026-01-12 04:40:33,875 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 23:41:07] 2026-01-12 04:40:33,875 | INFO     | job 6966588200 has completed (purged errors)
[2026-01-11 23:41:07] 2026-01-12 04:40:33,875 | INFO     | overall cleanup function is called
[2026-01-11 23:41:07] 2026-01-12 04:40:34,884 | INFO     | --- collectZombieJob: --- 10, [3446208]
[2026-01-11 23:41:07] 2026-01-12 04:40:34,884 | INFO     | zombie collector waiting for pid 3446208
[2026-01-11 23:41:07] 2026-01-12 04:40:34,884 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 23:41:07] 2026-01-12 04:40:34,884 | INFO     | collected zombie processes
[2026-01-11 23:41:07] 2026-01-12 04:40:34,884 | INFO     | will attempt to kill all subprocesses of pid=3446208
[2026-01-11 23:41:07] 2026-01-12 04:40:35,246 | INFO     | process IDs to be killed: [3446208] (in reverse order)
[2026-01-11 23:41:07] 2026-01-12 04:40:35,353 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 23:41:07] 2026-01-12 04:40:35,353 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 23:41:07] 2026-01-12 04:40:35,364 | INFO     | did not find any defunct processes belonging to 3446208
[2026-01-11 23:41:07] 2026-01-12 04:40:35,373 | INFO     | did not find any defunct processes belonging to 3446208
[2026-01-11 23:41:07] 2026-01-12 04:40:35,373 | INFO     | ready for new job
[2026-01-11 23:41:07] 2026-01-12 04:40:35,373 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 23:41:07] 2026-01-12 04:40:35,375 | INFO     | ***************************************
[2026-01-11 23:41:07] 2026-01-12 04:40:35,376 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 23:41:07] 2026-01-12 04:40:35,376 | INFO     | ***************************************
[2026-01-11 23:41:07] 2026-01-12 04:40:35,376 | INFO     | 
[2026-01-11 23:41:07] 2026-01-12 04:40:35,381 | INFO     | architecture information:
[2026-01-11 23:41:07] 2026-01-12 04:40:35,381 | INFO     | executing command: cat /etc/os-release
[2026-01-11 23:41:07] 2026-01-12 04:40:35,394 | INFO     | cat /etc/os-release:
[2026-01-11 23:41:07] NAME="CentOS Linux"
[2026-01-11 23:41:07] VERSION="7 (Core)"
[2026-01-11 23:41:07] ID="centos"
[2026-01-11 23:41:07] ID_LIKE="rhel fedora"
[2026-01-11 23:41:07] VERSION_ID="7"
[2026-01-11 23:41:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 23:41:07] ANSI_COLOR="0;31"
[2026-01-11 23:41:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 23:41:07] HOME_URL="https://www.centos.org/"
[2026-01-11 23:41:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 23:41:07] 
[2026-01-11 23:41:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 23:41:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 23:41:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 23:41:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 23:41:07] 
[2026-01-11 23:41:07] 2026-01-12 04:40:35,395 | INFO     | ***************************************
[2026-01-11 23:41:07] 2026-01-12 04:40:35,898 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 23:41:07] 2026-01-12 04:40:35,919 | INFO     | sufficient remaining disk space (129779105792 B)
[2026-01-11 23:41:07] 2026-01-12 04:40:35,919 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 23:41:07] 2026-01-12 04:40:35,919 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 23:41:07] 2026-01-12 04:40:35,919 | INFO     | update_server=False
[2026-01-11 23:41:07] 2026-01-12 04:40:35,919 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 23:41:07] 2026-01-12 04:40:35,920 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 23:41:07] 2026-01-12 04:40:35,947 | INFO     | all data control threads have been joined
[2026-01-11 23:41:07] 2026-01-12 04:40:36,038 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 23:41:07] 2026-01-12 04:40:36,359 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 23:41:07] 2026-01-12 04:40:36,359 | INFO     | aborting loop
[2026-01-11 23:41:07] 2026-01-12 04:40:36,925 | INFO     | [job] retrieve thread has finished
[2026-01-11 23:41:07] 2026-01-12 04:40:36,952 | INFO     | [data] control thread has finished
[2026-01-11 23:41:07] 2026-01-12 04:40:36,990 | INFO     | all job control threads have been joined
[2026-01-11 23:41:07] 2026-01-12 04:40:37,183 | INFO     | all payload control threads have been joined
[2026-01-11 23:41:07] 2026-01-12 04:40:37,235 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 23:41:07] 2026-01-12 04:40:37,364 | INFO     | [job] job monitor thread has finished
[2026-01-11 23:41:07] 2026-01-12 04:40:37,369 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 23:41:07] 2026-01-12 04:40:37,513 | INFO     | [data] copytool_in thread has finished
[2026-01-11 23:41:07] 2026-01-12 04:40:37,513 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 23:41:07] 2026-01-12 04:40:37,927 | INFO     | [data] copytool_out thread has finished
[2026-01-11 23:41:07] 2026-01-12 04:40:37,958 | INFO     | [payload] validate_post thread has finished
[2026-01-11 23:41:07] 2026-01-12 04:40:37,996 | INFO     | [job] control thread has finished
[2026-01-11 23:41:07] 2026-01-12 04:40:38,016 | INFO     | [payload] failed_post thread has finished
[2026-01-11 23:41:07] 2026-01-12 04:40:38,190 | INFO     | [payload] control thread has finished
[2026-01-11 23:41:07] 2026-01-12 04:40:38,200 | INFO     | [job] validate thread has finished
[2026-01-11 23:41:07] 2026-01-12 04:40:38,860 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 23:41:07] 2026-01-12 04:40:39,865 | INFO     | [job] queue monitor thread has finished
[2026-01-11 23:41:07] 2026-01-12 04:40:40,047 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 23:41:07] 2026-01-12 04:40:46,839 | INFO     | job.realtimelogging is not enabled
[2026-01-11 23:41:07] 2026-01-12 04:40:47,844 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 23:41:07] 2026-01-12 04:40:59,818 | INFO     | [monitor] cgroup control has ended
[2026-01-11 23:41:07] 2026-01-12 04:41:01,355 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140473574356800)>', '<ExcThread(monitor, started 140473293309696)>']
[2026-01-11 23:41:07] 2026-01-12 04:41:06,380 | INFO     | all workflow threads have been joined
[2026-01-11 23:41:07] 2026-01-12 04:41:06,380 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 23:41:07] 2026-01-12 04:41:06,380 | INFO     | traces error code: 0
[2026-01-11 23:41:07] 2026-01-12 04:41:06,381 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 23:41:07] 2026-01-12 04:41:07,078 | INFO     | PID=3439506 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 23:41:07] 2026-01-12 04:41:07,079 | INFO     | .. there are 13 such processes running
[2026-01-11 23:41:07] 2026-01-12 04:41:07,079 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 23:41:07] 2026-01-12 04:41:07,079 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 23:41:07] 2026-01-12 04:41:07,079 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 23:41:07] 2026-01-12 04:41:07,079 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 23:41:07] 2026-01-12 04:41:07,079 | INFO     | [monitor] control thread has ended
[2026-01-11 23:41:07] 2026-01-12 04:41:07,180 [wrapper] ==== pilot stdout END ====
[2026-01-11 23:41:07] 2026-01-12 04:41:07,184 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 23:41:07] 2026-01-12 04:41:07,187 [wrapper] pilotpid: 3439506
[2026-01-11 23:41:07] 2026-01-12 04:41:07,189 [wrapper] Pilot exit status: 0
[2026-01-11 23:41:07] 2026-01-12 04:41:07,201 [wrapper] pandaids: 6966588200
[2026-01-11 23:41:07] 2026-01-12 04:41:07,282 [wrapper] cleanup supervisor_pilot 3720895 3439507
[2026-01-11 23:41:07] 2026-01-12 04:41:07,286 [wrapper] Test setup, not cleaning
[2026-01-11 23:41:07] 2026-01-12 04:41:07,289 [wrapper] apfmon messages muted
[2026-01-11 23:41:07] 2026-01-12 04:41:07,292 [wrapper] ==== wrapper stdout END ====
[2026-01-11 23:41:07] 2026-01-12 04:41:07,295 [wrapper] ==== wrapper stderr END ====
[2026-01-11 23:41:07]  *** Error codes and diagnostics ***
[2026-01-11 23:41:07]     "exeErrorCode": 0,
[2026-01-11 23:41:07]     "exeErrorDiag": "",
[2026-01-11 23:41:07]     "pilotErrorCode": 0,
[2026-01-11 23:41:07]     "pilotErrorDiag": "",
[2026-01-11 23:41:07]  *** Listing of results directory ***
[2026-01-11 23:41:07] total 440196
[2026-01-11 23:41:07] -rw-r--r--. 1 boincer umatlas    579449 Jan 11 20:37 pilot3.tar.gz
[2026-01-11 23:41:07] -rwx------. 1 boincer umatlas     36322 Jan 11 20:53 runpilot2-wrapper.sh
[2026-01-11 23:41:07] -rw-r--r--. 1 boincer umatlas      5112 Jan 11 20:53 queuedata.json
[2026-01-11 23:41:07] -rw-r--r--. 1 boincer umatlas       100 Jan 11 20:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 23:41:07] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 20:53 run_atlas
[2026-01-11 23:41:07] -rw-r--r--. 1 boincer umatlas       105 Jan 11 20:53 job.xml
[2026-01-11 23:41:07] -rw-r--r--. 2 boincer umatlas 224930050 Jan 11 20:53 EVNT.47898824._001170.pool.root.1
[2026-01-11 23:41:07] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 20:53 shared
[2026-01-11 23:41:07] -rw-r--r--. 2 boincer umatlas    592390 Jan 11 20:53 input.tar.gz
[2026-01-11 23:41:07] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 20:53 start_atlas.sh
[2026-01-11 23:41:07] -rw-r--r--. 1 boincer umatlas         0 Jan 11 20:53 boinc_lockfile
[2026-01-11 23:41:07] -rw-r--r--. 1 boincer umatlas      2517 Jan 11 20:53 pandaJob.out
[2026-01-11 23:41:07] -rw-------. 1 boincer umatlas        57 Jan 11 20:53 setup.sh.local
[2026-01-11 23:41:07] -rw-------. 1 boincer umatlas    990074 Jan 11 20:53 agis_schedconf.cvmfs.json
[2026-01-11 23:41:07] -rw-------. 1 boincer umatlas   1516240 Jan 11 20:53 agis_ddmendpoints.agis.ALL.json
[2026-01-11 23:41:07] drwx------. 5 boincer umatlas      4096 Jan 11 20:53 pilot3
[2026-01-11 23:41:07] -rw-r--r--. 1 boincer umatlas      6956 Jan 11 23:38 init_data.xml
[2026-01-11 23:41:07] -rw-------. 1 boincer umatlas 218333152 Jan 11 23:39 HITS.47898826._040849.pool.root.1
[2026-01-11 23:41:07] -rw-r--r--. 1 boincer umatlas       530 Jan 11 23:40 boinc_task_state.xml
[2026-01-11 23:41:07] -rw-------. 1 boincer umatlas      1033 Jan 11 23:40 memory_monitor_summary.json
[2026-01-11 23:41:07] -rw-------. 1 boincer umatlas    420078 Jan 11 23:40 log.47898826._040849.job.log.tgz.1
[2026-01-11 23:41:07] -rw-------. 1 boincer umatlas      7765 Jan 11 23:40 heartbeat.json
[2026-01-11 23:41:07] -rw-------. 1 boincer umatlas        95 Jan 11 23:40 pilot_heartbeat.json
[2026-01-11 23:41:07] -rw-------. 1 boincer umatlas       823 Jan 11 23:41 pilotlog.txt
[2026-01-11 23:41:07] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 23:41 boinc_mmap_file
[2026-01-11 23:41:07] -rw-------. 1 boincer umatlas   1375043 Jan 11 23:41 log.47898826._040849.job.log.1
[2026-01-11 23:41:07] -rw-------. 1 boincer umatlas       357 Jan 11 23:41 output.list
[2026-01-11 23:41:07] -rw-r--r--. 1 boincer umatlas       620 Jan 11 23:41 runtime_log
[2026-01-11 23:41:07] -rw-------. 1 boincer umatlas   1812480 Jan 11 23:41 result.tar.gz
[2026-01-11 23:41:07] -rw-r--r--. 1 boincer umatlas        28 Jan 11 23:41 wrapper_checkpoint.txt
[2026-01-11 23:41:07] -rw-r--r--. 1 boincer umatlas      9338 Jan 11 23:41 runtime_log.err
[2026-01-11 23:41:07] -rw-------. 1 boincer umatlas       654 Jan 11 23:41 gp4LDmIIMz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmo4mKDmUbZ9on.diag
[2026-01-11 23:41:07] -rw-r--r--. 1 boincer umatlas     21407 Jan 11 23:41 stderr.txt
[2026-01-11 23:41:07] HITS file was successfully produced:
[2026-01-11 23:41:07] -rw-------. 1 boincer umatlas 218333152 Jan 11 23:39 shared/HITS.pool.root.1
[2026-01-11 23:41:07]  *** Contents of shared directory: ***
[2026-01-11 23:41:07] total 435248
[2026-01-11 23:41:07] -rw-r--r--. 2 boincer umatlas 224930050 Jan 11 20:53 ATLAS.root_0
[2026-01-11 23:41:07] -rw-r--r--. 2 boincer umatlas    592390 Jan 11 20:53 input.tar.gz
[2026-01-11 23:41:07] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 20:53 start_atlas.sh
[2026-01-11 23:41:07] -rw-------. 1 boincer umatlas 218333152 Jan 11 23:39 HITS.pool.root.1
[2026-01-11 23:41:07] -rw-------. 1 boincer umatlas   1812480 Jan 11 23:41 result.tar.gz
23:41:09 (3435772): run_atlas exited; CPU time 47605.686657
23:41:09 (3435772): called boinc_finish(0)

</stderr_txt>
]]>

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