Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:38:02 (1523056): wrapper (7.7.26015): starting
20:38:02 (1523056): wrapper: running run_atlas (--nthreads 9)
[2026-01-11 20:38:02] Arguments: --nthreads 9
[2026-01-11 20:38:02] Threads: 9
[2026-01-11 20:38:02] Checking for CVMFS
[2026-01-11 20:38:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 20:38:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 20:38:02] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 20:38:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 20:38:02] 2.13.3.0 6658 24803 252348 155035 1 367 39566513 40960001 9596 16776704 0 24420628 99.719 20552927 45522 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-11 20:38:02] CVMFS is ok
[2026-01-11 20:38:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 20:38:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 20:38:02] Further information can be found at the LHC@home message board.
[2026-01-11 20:38:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 20:38:02] Checking for apptainer binary...
[2026-01-11 20:38:02] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 20:38:02] Running /usr/bin/apptainer --version
[2026-01-11 20:38:02] apptainer version 1.4.5-2.el9
[2026-01-11 20:38:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 20:38:02] c-206-38.aglt2.org
[2026-01-11 20:38:02] apptainer works
[2026-01-11 20:38:02] Set ATHENA_PROC_NUMBER=9
[2026-01-11 20:38:02] Set ATHENA_CORE_NUMBER=9
[2026-01-11 20:38:02] Starting ATLAS job with PandaID=6966580308
[2026-01-11 20:38:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 23:46:00]  *** The last 200 lines of the pilot log: ***
[2026-01-11 23:46:00] 2026-01-12 04:45:23,029 | INFO     | total number of processed events: 400 (read)
[2026-01-11 23:46:00] 2026-01-12 04:45:23,030 | INFO     | executing command: lscpu
[2026-01-11 23:46:00] 2026-01-12 04:45:23,080 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 23:46:00] 2026-01-12 04:45:24,522 | INFO     | time since job start (11231s) is within the limit (349056.0s)
[2026-01-11 23:46:00] 2026-01-12 04:45:24,630 | INFO     | monitor loop #764: job 0:6966580308 is in state 'finished'
[2026-01-11 23:46:00] 2026-01-12 04:45:24,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 23:46:00] 2026-01-12 04:45:26,527 | INFO     | time since job start (11233s) is within the limit (349056.0s)
[2026-01-11 23:46:00] 2026-01-12 04:45:26,819 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 23:46:00] 2026-01-12 04:45:26,823 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3285.5269687500004
[2026-01-11 23:46:00] 2026-01-12 04:45:26,833 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966580308/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 23:46:00] 2026-01-12 04:45:26,833 | INFO     | extracted standard info from prmon json
[2026-01-11 23:46:00] 2026-01-12 04:45:26,833 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 23:46:00] 2026-01-12 04:45:26,833 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 23:46:00] 2026-01-12 04:45:26,834 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 23:46:00] 2026-01-12 04:45:26,834 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 23:46:00] 2026-01-12 04:45:26,837 | INFO     | fitting pss+swap vs Time
[2026-01-11 23:46:00] 2026-01-12 04:45:26,837 | INFO     | sum of square deviations: 1931533564.1521647
[2026-01-11 23:46:00] 2026-01-12 04:45:26,838 | INFO     | sum of deviations: -37686221820.11956
[2026-01-11 23:46:00] 2026-01-12 04:45:26,838 | INFO     | mean x: 1768187501.7934783
[2026-01-11 23:46:00] 2026-01-12 04:45:26,838 | INFO     | mean y: 2659913.7336956523
[2026-01-11 23:46:00] 2026-01-12 04:45:26,838 | INFO     | intersect: 34501830753.357025
[2026-01-11 23:46:00] 2026-01-12 04:45:26,839 | INFO     | chi2: 1.4264763434854704
[2026-01-11 23:46:00] 2026-01-12 04:45:26,839 | INFO     | sum of square deviations: 1778319253.7094965
[2026-01-11 23:46:00] 2026-01-12 04:45:26,840 | INFO     | sum of deviations: -36592720994.279335
[2026-01-11 23:46:00] 2026-01-12 04:45:26,840 | INFO     | mean x: 1768187349.301676
[2026-01-11 23:46:00] 2026-01-12 04:45:26,840 | INFO     | mean y: 2661006.5977653633
[2026-01-11 23:46:00] 2026-01-12 04:45:26,840 | INFO     | intersect: 36386896403.95028
[2026-01-11 23:46:00] 2026-01-12 04:45:26,840 | INFO     | chi2: 1.4191882511675105
[2026-01-11 23:46:00] 2026-01-12 04:45:26,840 | INFO     | current chi2=1.4191882511675105 (change=0.5109157506357299 %)
[2026-01-11 23:46:00] 2026-01-12 04:45:26,840 | INFO     | right removable region: 178
[2026-01-11 23:46:00] 2026-01-12 04:45:26,841 | INFO     | sum of square deviations: 1778286313.7094965
[2026-01-11 23:46:00] 2026-01-12 04:45:26,842 | INFO     | sum of deviations: -56848740328.46923
[2026-01-11 23:46:00] 2026-01-12 04:45:26,842 | INFO     | mean x: 1768187654.301676
[2026-01-11 23:46:00] 2026-01-12 04:45:26,842 | INFO     | mean y: 2678611.5642458103
[2026-01-11 23:46:00] 2026-01-12 04:45:26,842 | INFO     | intersect: 56528582250.62362
[2026-01-11 23:46:00] 2026-01-12 04:45:26,842 | INFO     | chi2: 0.30698057580585475
[2026-01-11 23:46:00] 2026-01-12 04:45:26,842 | INFO     | current chi2=0.30698057580585475 (change=78.47979903713127 %)
[2026-01-11 23:46:00] 2026-01-12 04:45:26,842 | INFO     | sum of square deviations: 1633397678.5517194
[2026-01-11 23:46:00] 2026-01-12 04:45:26,843 | INFO     | sum of deviations: -50043237620.3104
[2026-01-11 23:46:00] 2026-01-12 04:45:26,843 | INFO     | mean x: 1768187806.7931035
[2026-01-11 23:46:00] 2026-01-12 04:45:26,844 | INFO     | mean y: 2671441.7413793104
[2026-01-11 23:46:00] 2026-01-12 04:45:26,844 | INFO     | intersect: 54175542956.49723
[2026-01-11 23:46:00] 2026-01-12 04:45:26,844 | INFO     | chi2: 0.30255815698170374
[2026-01-11 23:46:00] 2026-01-12 04:45:26,844 | INFO     | current chi2=0.30255815698170374 (change=1.4406184536405005 %)
[2026-01-11 23:46:00] 2026-01-12 04:45:26,844 | INFO     | left removable region: 20
[2026-01-11 23:46:00] 2026-01-12 04:45:26,844 | INFO     | sum of square deviations: 1222968813.5189912
[2026-01-11 23:46:00] 2026-01-12 04:45:26,845 | INFO     | sum of deviations: -33073684894.91141
[2026-01-11 23:46:00] 2026-01-12 04:45:26,845 | INFO     | mean x: 1768187928.7974684
[2026-01-11 23:46:00] 2026-01-12 04:45:26,845 | INFO     | mean y: 2654345.7215189873
[2026-01-11 23:46:00] 2026-01-12 04:45:26,845 | INFO     | intersect: 47821118517.15102
[2026-01-11 23:46:00] 2026-01-12 04:45:26,846 | INFO     | chi2: 0.2609825610497288
[2026-01-11 23:46:00] 2026-01-12 04:45:26,846 | INFO     | current memory leak: -27.04 B/s (using 158 data points, chi2=0.26)
[2026-01-11 23:46:00] 2026-01-12 04:45:26,846 | INFO     | could have reported an average CPU frequency of 3287 MHz (10 samples)
[2026-01-11 23:46:00] 2026-01-12 04:45:26,846 | INFO     | ..............................
[2026-01-11 23:46:00] 2026-01-12 04:45:26,846 | INFO     | . Timing measurements:
[2026-01-11 23:46:00] 2026-01-12 04:45:26,846 | INFO     | . get job = 0 s
[2026-01-11 23:46:00] 2026-01-12 04:45:26,846 | INFO     | . initial setup = 2 s
[2026-01-11 23:46:00] 2026-01-12 04:45:26,847 | INFO     | . payload setup = 5 s
[2026-01-11 23:46:00] 2026-01-12 04:45:26,847 | INFO     | . stage-in = 0 s
[2026-01-11 23:46:00] 2026-01-12 04:45:26,847 | INFO     | . payload execution = 11197 s
[2026-01-11 23:46:00] 2026-01-12 04:45:26,847 | INFO     | . stage-out = 2 s
[2026-01-11 23:46:00] 2026-01-12 04:45:26,847 | INFO     | . log creation = 0 s
[2026-01-11 23:46:00] 2026-01-12 04:45:26,847 | INFO     | ..............................
[2026-01-11 23:46:00] 2026-01-12 04:45:26,930 | INFO     | 
[2026-01-11 23:46:00] 2026-01-12 04:45:26,930 | INFO     | job summary report
[2026-01-11 23:46:00] 2026-01-12 04:45:26,930 | INFO     | --------------------------------------------------
[2026-01-11 23:46:00] 2026-01-12 04:45:26,930 | INFO     | PanDA job id: 6966580308
[2026-01-11 23:46:00] 2026-01-12 04:45:26,930 | INFO     | task id: 47898826
[2026-01-11 23:46:00] 2026-01-12 04:45:26,930 | INFO     | errors: (none)
[2026-01-11 23:46:00] 2026-01-12 04:45:26,930 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 23:46:00] 2026-01-12 04:45:26,931 | INFO     | pilot state: finished 
[2026-01-11 23:46:00] 2026-01-12 04:45:26,931 | INFO     | transexitcode: 0
[2026-01-11 23:46:00] 2026-01-12 04:45:26,931 | INFO     | exeerrorcode: 0
[2026-01-11 23:46:00] 2026-01-12 04:45:26,931 | INFO     | exeerrordiag: 
[2026-01-11 23:46:00] 2026-01-12 04:45:26,931 | INFO     | exitcode: 0
[2026-01-11 23:46:00] 2026-01-12 04:45:26,931 | INFO     | exitmsg: OK
[2026-01-11 23:46:00] 2026-01-12 04:45:26,931 | INFO     | cpuconsumptiontime: 45574 s
[2026-01-11 23:46:00] 2026-01-12 04:45:26,931 | INFO     | nevents: 400
[2026-01-11 23:46:00] 2026-01-12 04:45:26,931 | INFO     | neventsw: 0
[2026-01-11 23:46:00] 2026-01-12 04:45:26,931 | INFO     | pid: 1533444
[2026-01-11 23:46:00] 2026-01-12 04:45:26,931 | INFO     | pgrp: 1533444
[2026-01-11 23:46:00] 2026-01-12 04:45:26,931 | INFO     | corecount: 9
[2026-01-11 23:46:00] 2026-01-12 04:45:26,931 | INFO     | event service: False
[2026-01-11 23:46:00] 2026-01-12 04:45:26,931 | INFO     | sizes: {0: 2283747, 1: 2283946, 5: 2284208, 11: 2284264, 11207: 2313746, 11210: 2322744, 11212: 2322928, 11217: 2323150}
[2026-01-11 23:46:00] 2026-01-12 04:45:26,932 | INFO     | --------------------------------------------------
[2026-01-11 23:46:00] 2026-01-12 04:45:26,932 | INFO     | 
[2026-01-11 23:46:00] 2026-01-12 04:45:26,932 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 23:46:00] 2026-01-12 04:45:26,951 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 23:46:00] 2026-01-12 04:45:26,951 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 23:46:00] 2026-01-12 04:45:26,951 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 23:46:00] 2026-01-12 04:45:26,951 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 23:46:00] 2026-01-12 04:45:26,951 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 23:46:00] 2026-01-12 04:45:26,952 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 23:46:00] 2026-01-12 04:45:26,952 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 23:46:00] 2026-01-12 04:45:26,952 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 23:46:00] 2026-01-12 04:45:26,952 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 23:46:00] 2026-01-12 04:45:26,952 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 23:46:00] 2026-01-12 04:45:26,952 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 23:46:00] 2026-01-12 04:45:26,952 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 23:46:00] 2026-01-12 04:45:26,952 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 23:46:00] 2026-01-12 04:45:26,952 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 23:46:00] 2026-01-12 04:45:26,952 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 23:46:00] 2026-01-12 04:45:26,952 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 23:46:00] 2026-01-12 04:45:26,952 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 23:46:00] 2026-01-12 04:45:26,952 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 23:46:00] 2026-01-12 04:45:26,953 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 23:46:00] 2026-01-12 04:45:26,953 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 23:46:00] 2026-01-12 04:45:26,953 | INFO     | job 6966580308 has completed (purged errors)
[2026-01-11 23:46:00] 2026-01-12 04:45:26,953 | INFO     | overall cleanup function is called
[2026-01-11 23:46:00] 2026-01-12 04:45:27,860 | INFO     | PID=1526736 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-11 23:46:00] 2026-01-12 04:45:27,860 | INFO     | .. there are 9 such processes running
[2026-01-11 23:46:00] 2026-01-12 04:45:27,962 | INFO     | --- collectZombieJob: --- 10, [1533444]
[2026-01-11 23:46:00] 2026-01-12 04:45:27,962 | INFO     | zombie collector waiting for pid 1533444
[2026-01-11 23:46:00] 2026-01-12 04:45:27,962 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 23:46:00] 2026-01-12 04:45:27,962 | INFO     | collected zombie processes
[2026-01-11 23:46:00] 2026-01-12 04:45:27,962 | INFO     | will attempt to kill all subprocesses of pid=1533444
[2026-01-11 23:46:00] 2026-01-12 04:45:28,219 | INFO     | process IDs to be killed: [1533444] (in reverse order)
[2026-01-11 23:46:00] 2026-01-12 04:45:28,328 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 23:46:00] 2026-01-12 04:45:28,329 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 23:46:00] 2026-01-12 04:45:28,339 | INFO     | did not find any defunct processes belonging to 1533444
[2026-01-11 23:46:00] 2026-01-12 04:45:28,348 | INFO     | did not find any defunct processes belonging to 1533444
[2026-01-11 23:46:00] 2026-01-12 04:45:28,348 | INFO     | ready for new job
[2026-01-11 23:46:00] 2026-01-12 04:45:28,348 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 23:46:00] 2026-01-12 04:45:28,351 | INFO     | ***************************************
[2026-01-11 23:46:00] 2026-01-12 04:45:28,351 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 23:46:00] 2026-01-12 04:45:28,351 | INFO     | ***************************************
[2026-01-11 23:46:00] 2026-01-12 04:45:28,351 | INFO     | 
[2026-01-11 23:46:00] 2026-01-12 04:45:28,355 | INFO     | architecture information:
[2026-01-11 23:46:00] 2026-01-12 04:45:28,355 | INFO     | executing command: cat /etc/os-release
[2026-01-11 23:46:00] 2026-01-12 04:45:28,376 | INFO     | cat /etc/os-release:
[2026-01-11 23:46:00] NAME="CentOS Linux"
[2026-01-11 23:46:00] VERSION="7 (Core)"
[2026-01-11 23:46:00] ID="centos"
[2026-01-11 23:46:00] ID_LIKE="rhel fedora"
[2026-01-11 23:46:00] VERSION_ID="7"
[2026-01-11 23:46:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 23:46:00] ANSI_COLOR="0;31"
[2026-01-11 23:46:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 23:46:00] HOME_URL="https://www.centos.org/"
[2026-01-11 23:46:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 23:46:00] 
[2026-01-11 23:46:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 23:46:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 23:46:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 23:46:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 23:46:00] 
[2026-01-11 23:46:00] 2026-01-12 04:45:28,376 | INFO     | ***************************************
[2026-01-11 23:46:00] 2026-01-12 04:45:28,880 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 23:46:00] 2026-01-12 04:45:28,905 | INFO     | sufficient remaining disk space (86426779648 B)
[2026-01-11 23:46:00] 2026-01-12 04:45:28,906 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 23:46:00] 2026-01-12 04:45:28,906 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 23:46:00] 2026-01-12 04:45:28,906 | INFO     | update_server=False
[2026-01-11 23:46:00] 2026-01-12 04:45:28,906 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 23:46:00] 2026-01-12 04:45:28,906 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 23:46:00] 2026-01-12 04:45:28,906 | INFO     | aborting loop
[2026-01-11 23:46:00] 2026-01-12 04:45:28,906 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 23:46:00] 2026-01-12 04:45:29,311 | INFO     | all payload control threads have been joined
[2026-01-11 23:46:00] 2026-01-12 04:45:29,683 | INFO     | all data control threads have been joined
[2026-01-11 23:46:00] 2026-01-12 04:45:29,912 | INFO     | [job] retrieve thread has finished
[2026-01-11 23:46:00] 2026-01-12 04:45:29,912 | INFO     | [job] job monitor thread has finished
[2026-01-11 23:46:00] 2026-01-12 04:45:29,913 | INFO     | [job] queue monitor thread has finished
[2026-01-11 23:46:00] 2026-01-12 04:45:29,968 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 23:46:00] 2026-01-12 04:45:30,159 | INFO     | [payload] validate_post thread has finished
[2026-01-11 23:46:00] 2026-01-12 04:45:30,281 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 23:46:00] 2026-01-12 04:45:30,314 | INFO     | [payload] control thread has finished
[2026-01-11 23:46:00] 2026-01-12 04:45:30,367 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 23:46:00] 2026-01-12 04:45:30,368 | INFO     | [data] copytool_in thread has finished
[2026-01-11 23:46:00] 2026-01-12 04:45:30,395 | INFO     | all job control threads have been joined
[2026-01-11 23:46:00] 2026-01-12 04:45:30,689 | INFO     | [data] control thread has finished
[2026-01-11 23:46:00] 2026-01-12 04:45:30,773 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 23:46:00] 2026-01-12 04:45:31,018 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 23:46:00] 2026-01-12 04:45:31,254 | INFO     | [job] validate thread has finished
[2026-01-11 23:46:00] 2026-01-12 04:45:31,278 | INFO     | [payload] failed_post thread has finished
[2026-01-11 23:46:00] 2026-01-12 04:45:31,396 | INFO     | [job] control thread has finished
[2026-01-11 23:46:00] 2026-01-12 04:45:31,882 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 23:46:00] 2026-01-12 04:45:31,974 | INFO     | [data] copytool_out thread has finished
[2026-01-11 23:46:00] 2026-01-12 04:45:32,413 | INFO     | [monitor] cgroup control has ended
[2026-01-11 23:46:00] 2026-01-12 04:45:35,889 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 23:46:00] 2026-01-12 04:45:37,961 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140326651213632)>', '<ExcThread(monitor, started 140326287165184)>']
[2026-01-11 23:46:00] 2026-01-12 04:45:42,986 | INFO     | all workflow threads have been joined
[2026-01-11 23:46:00] 2026-01-12 04:45:42,987 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 23:46:00] 2026-01-12 04:45:42,991 | INFO     | traces error code: 0
[2026-01-11 23:46:00] 2026-01-12 04:45:42,991 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 23:46:00] 2026-01-12 04:46:00,226 | INFO     | PID=1526736 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 23:46:00] 2026-01-12 04:46:00,226 | INFO     | .. there are 9 such processes running
[2026-01-11 23:46:00] 2026-01-12 04:46:00,227 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 23:46:00] 2026-01-12 04:46:00,227 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 23:46:00] 2026-01-12 04:46:00,227 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 23:46:00] 2026-01-12 04:46:00,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 23:46:00] 2026-01-12 04:46:00,227 | INFO     | [monitor] control thread has ended
[2026-01-11 23:46:00] 2026-01-12 04:46:00,358 [wrapper] ==== pilot stdout END ====
[2026-01-11 23:46:00] 2026-01-12 04:46:00,361 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 23:46:00] 2026-01-12 04:46:00,364 [wrapper] pilotpid: 1526736
[2026-01-11 23:46:00] 2026-01-12 04:46:00,368 [wrapper] Pilot exit status: 0
[2026-01-11 23:46:00] 2026-01-12 04:46:00,380 [wrapper] pandaids: 6966580308
[2026-01-11 23:46:00] 2026-01-12 04:46:00,451 [wrapper] cleanup supervisor_pilot 1806154 1526737
[2026-01-11 23:46:00] 2026-01-12 04:46:00,456 [wrapper] Test setup, not cleaning
[2026-01-11 23:46:00] 2026-01-12 04:46:00,460 [wrapper] apfmon messages muted
[2026-01-11 23:46:00] 2026-01-12 04:46:00,462 [wrapper] ==== wrapper stdout END ====
[2026-01-11 23:46:00] 2026-01-12 04:46:00,466 [wrapper] ==== wrapper stderr END ====
[2026-01-11 23:46:00]  *** Error codes and diagnostics ***
[2026-01-11 23:46:00]     "exeErrorCode": 0,
[2026-01-11 23:46:00]     "exeErrorDiag": "",
[2026-01-11 23:46:00]     "pilotErrorCode": 0,
[2026-01-11 23:46:00]     "pilotErrorDiag": "",
[2026-01-11 23:46:00]  *** Listing of results directory ***
[2026-01-11 23:46:00] total 440436
[2026-01-11 23:46:00] -rwx------. 1 boincer umatlas     36322 Jan 11 20:37 runpilot2-wrapper.sh
[2026-01-11 23:46:00] -rw-r--r--. 1 boincer umatlas      5112 Jan 11 20:37 queuedata.json
[2026-01-11 23:46:00] -rw-r--r--. 1 boincer umatlas    579449 Jan 11 20:37 pilot3.tar.gz
[2026-01-11 23:46:00] -rw-r--r--. 1 boincer umatlas       100 Jan 11 20:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 23:46:00] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 20:38 run_atlas
[2026-01-11 23:46:00] -rw-r--r--. 1 boincer umatlas       105 Jan 11 20:38 job.xml
[2026-01-11 23:46:00] -rw-r--r--. 2 boincer umatlas 223632102 Jan 11 20:38 EVNT.47898824._001325.pool.root.1
[2026-01-11 23:46:00] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 20:38 start_atlas.sh
[2026-01-11 23:46:00] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 20:38 shared
[2026-01-11 23:46:00] -rw-r--r--. 2 boincer umatlas    592402 Jan 11 20:38 input.tar.gz
[2026-01-11 23:46:00] -rw-r--r--. 1 boincer umatlas         0 Jan 11 20:38 boinc_lockfile
[2026-01-11 23:46:00] -rw-r--r--. 1 boincer umatlas      2517 Jan 11 20:38 pandaJob.out
[2026-01-11 23:46:00] -rw-------. 1 boincer umatlas        57 Jan 11 20:38 setup.sh.local
[2026-01-11 23:46:00] -rw-------. 1 boincer umatlas    990074 Jan 11 20:38 agis_schedconf.cvmfs.json
[2026-01-11 23:46:00] drwx------. 5 boincer umatlas      4096 Jan 11 20:38 pilot3
[2026-01-11 23:46:00] -rw-r--r--. 1 boincer umatlas      6906 Jan 11 23:38 init_data.xml
[2026-01-11 23:46:00] -rw-------. 1 boincer umatlas 219509804 Jan 11 23:44 HITS.47898826._040848.pool.root.1
[2026-01-11 23:46:00] -rw-r--r--. 1 boincer umatlas       530 Jan 11 23:44 boinc_task_state.xml
[2026-01-11 23:46:00] -rw-------. 1 boincer umatlas      1029 Jan 11 23:45 memory_monitor_summary.json
[2026-01-11 23:46:00] -rw-------. 1 boincer umatlas   1516240 Jan 11 23:45 agis_ddmendpoints.agis.ALL.json
[2026-01-11 23:46:00] -rw-------. 1 boincer umatlas    436918 Jan 11 23:45 log.47898826._040848.job.log.tgz.1
[2026-01-11 23:46:00] -rw-------. 1 boincer umatlas      7778 Jan 11 23:45 heartbeat.json
[2026-01-11 23:46:00] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 23:45 boinc_mmap_file
[2026-01-11 23:46:00] -rw-r--r--. 1 boincer umatlas        28 Jan 11 23:45 wrapper_checkpoint.txt
[2026-01-11 23:46:00] -rw-------. 1 boincer umatlas       822 Jan 11 23:46 pilotlog.txt
[2026-01-11 23:46:00] -rw-------. 1 boincer umatlas        95 Jan 11 23:46 pilot_heartbeat.json
[2026-01-11 23:46:00] -rw-------. 1 boincer umatlas   1537038 Jan 11 23:46 log.47898826._040848.job.log.1
[2026-01-11 23:46:00] -rw-------. 1 boincer umatlas       357 Jan 11 23:46 output.list
[2026-01-11 23:46:00] -rw-r--r--. 1 boincer umatlas       620 Jan 11 23:46 runtime_log
[2026-01-11 23:46:00] -rw-------. 1 boincer umatlas   1996800 Jan 11 23:46 result.tar.gz
[2026-01-11 23:46:00] -rw-r--r--. 1 boincer umatlas      9343 Jan 11 23:46 runtime_log.err
[2026-01-11 23:46:00] -rw-------. 1 boincer umatlas       656 Jan 11 23:46 MgONDmM3Lz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmn4mKDmpAkKTo.diag
[2026-01-11 23:46:00] -rw-r--r--. 1 boincer umatlas     21514 Jan 11 23:46 stderr.txt
[2026-01-11 23:46:00] HITS file was successfully produced:
[2026-01-11 23:46:00] -rw-------. 1 boincer umatlas 219509804 Jan 11 23:44 shared/HITS.pool.root.1
[2026-01-11 23:46:00]  *** Contents of shared directory: ***
[2026-01-11 23:46:00] total 435312
[2026-01-11 23:46:00] -rw-r--r--. 2 boincer umatlas 223632102 Jan 11 20:38 ATLAS.root_0
[2026-01-11 23:46:00] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 20:38 start_atlas.sh
[2026-01-11 23:46:00] -rw-r--r--. 2 boincer umatlas    592402 Jan 11 20:38 input.tar.gz
[2026-01-11 23:46:00] -rw-------. 1 boincer umatlas 219509804 Jan 11 23:44 HITS.pool.root.1
[2026-01-11 23:46:00] -rw-------. 1 boincer umatlas   1996800 Jan 11 23:46 result.tar.gz
23:46:02 (1523056): run_atlas exited; CPU time 45663.503720
23:46:02 (1523056): called boinc_finish(0)

</stderr_txt>
]]>

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