Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:04:39 (152179): wrapper (7.7.26015): starting
18:04:39 (152179): wrapper: running run_atlas (--nthreads 11)
[2026-01-11 18:04:39] Arguments: --nthreads 11
[2026-01-11 18:04:39] Threads: 11
[2026-01-11 18:04:39] Checking for CVMFS
[2026-01-11 18:04:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 18:04:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 18:04:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 18:04:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 18:04:39] 2.13.3.0 12525 96791 173300 155031 2 32 23602740 40960001 11607 16776704 0 532746277 99.654 496530646 35659 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-11 18:04:39] CVMFS is ok
[2026-01-11 18:04:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 18:04:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 18:04:40] Further information can be found at the LHC@home message board.
[2026-01-11 18:04:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 18:04:40] Checking for apptainer binary...
[2026-01-11 18:04:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 18:04:40] Running /usr/bin/apptainer --version
[2026-01-11 18:04:40] apptainer version 1.4.5-2.el9
[2026-01-11 18:04:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 18:04:40] c7-4-30.aglt2.org
[2026-01-11 18:04:40] apptainer works
[2026-01-11 18:04:40] Set ATHENA_PROC_NUMBER=11
[2026-01-11 18:04:40] Set ATHENA_CORE_NUMBER=11
[2026-01-11 18:04:40] Starting ATLAS job with PandaID=6966526300
[2026-01-11 18:04:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 19:03:20]  *** The last 200 lines of the pilot log: ***
[2026-01-11 19:03:20] 2026-01-12 00:02:23,108 | INFO     | maximum number of monitored processes: 17
[2026-01-11 19:03:20] 2026-01-12 00:02:24,268 | INFO     | time since job start (3452s) is within the limit (349056.0s)
[2026-01-11 19:03:20] 2026-01-12 00:02:24,528 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 19:03:20] 2026-01-12 00:02:24,938 | INFO     | job 6966526300 has state=finished
[2026-01-11 19:03:20] 2026-01-12 00:02:24,938 | INFO     | preparing for final server update for job 6966526300 in state='finished'
[2026-01-11 19:03:20] 2026-01-12 00:02:24,939 | INFO     | this job has now completed (state=finished)
[2026-01-11 19:03:20] 2026-01-12 00:02:24,939 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 19:03:20] 2026-01-12 00:02:24,939 | INFO     | log transfer has been attempted: DONE
[2026-01-11 19:03:20] 2026-01-12 00:02:24,939 | INFO     | job 6966526300 has finished - writing final server update
[2026-01-11 19:03:20] 2026-01-12 00:02:24,939 | INFO     | total number of processed events: 50 (read)
[2026-01-11 19:03:20] 2026-01-12 00:02:24,944 | INFO     | executing command: lscpu
[2026-01-11 19:03:20] 2026-01-12 00:02:25,190 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 19:03:20] 2026-01-12 00:02:25,617 | INFO     | monitor loop #227: job 0:6966526300 is in state 'finished'
[2026-01-11 19:03:20] 2026-01-12 00:02:25,618 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 19:03:20] 2026-01-12 00:02:26,281 | INFO     | time since job start (3454s) is within the limit (349056.0s)
[2026-01-11 19:03:20] 2026-01-12 00:02:27,833 | INFO     | PID=159297 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 19:03:20] 2026-01-12 00:02:27,833 | INFO     | .. there are 14 such processes running
[2026-01-11 19:03:20] 2026-01-12 00:02:28,141 | INFO     | monitor loop #228: job 0:6966526300 is in state 'finished'
[2026-01-11 19:03:20] 2026-01-12 00:02:28,141 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 19:03:20] 2026-01-12 00:02:28,834 | INFO     | time since job start (3456s) is within the limit (349056.0s)
[2026-01-11 19:03:20] 2026-01-12 00:02:30,647 | INFO     | monitor loop #229: job 0:6966526300 is in state 'finished'
[2026-01-11 19:03:20] 2026-01-12 00:02:30,647 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 19:03:20] 2026-01-12 00:02:30,840 | INFO     | time since job start (3458s) is within the limit (349056.0s)
[2026-01-11 19:03:20] 2026-01-12 00:02:32,846 | INFO     | time since job start (3460s) is within the limit (349056.0s)
[2026-01-11 19:03:20] 2026-01-12 00:02:33,161 | INFO     | monitor loop #230: job 0:6966526300 is in state 'finished'
[2026-01-11 19:03:20] 2026-01-12 00:02:33,161 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 19:03:20] 2026-01-12 00:02:34,853 | INFO     | time since job start (3462s) is within the limit (349056.0s)
[2026-01-11 19:03:20] 2026-01-12 00:02:35,666 | INFO     | monitor loop #231: job 0:6966526300 is in state 'finished'
[2026-01-11 19:03:20] 2026-01-12 00:02:35,666 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 19:03:20] 2026-01-12 00:02:36,868 | INFO     | time since job start (3464s) is within the limit (349056.0s)
[2026-01-11 19:03:20] 2026-01-12 00:02:38,174 | INFO     | monitor loop #232: job 0:6966526300 is in state 'finished'
[2026-01-11 19:03:20] 2026-01-12 00:02:38,174 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 19:03:20] 2026-01-12 00:02:38,904 | INFO     | time since job start (3466s) is within the limit (349056.0s)
[2026-01-11 19:03:20] 2026-01-12 00:02:40,679 | INFO     | monitor loop #233: job 0:6966526300 is in state 'finished'
[2026-01-11 19:03:20] 2026-01-12 00:02:40,679 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 19:03:20] 2026-01-12 00:02:40,911 | INFO     | time since job start (3468s) is within the limit (349056.0s)
[2026-01-11 19:03:20] 2026-01-12 00:02:42,919 | INFO     | time since job start (3470s) is within the limit (349056.0s)
[2026-01-11 19:03:20] 2026-01-12 00:02:43,184 | INFO     | monitor loop #234: job 0:6966526300 is in state 'finished'
[2026-01-11 19:03:20] 2026-01-12 00:02:43,184 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 19:03:20] 2026-01-12 00:02:44,300 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 19:03:20] 2026-01-12 00:02:44,305 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3191.289666666666
[2026-01-11 19:03:20] 2026-01-12 00:02:44,319 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966526300/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 19:03:20] 2026-01-12 00:02:44,320 | INFO     | extracted standard info from prmon json
[2026-01-11 19:03:20] 2026-01-12 00:02:44,320 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 19:03:20] 2026-01-12 00:02:44,320 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 19:03:20] 2026-01-12 00:02:44,322 | INFO     | fitting pss+swap vs Time
[2026-01-11 19:03:20] 2026-01-12 00:02:44,322 | INFO     | sum of square deviations: 36508753.10204086
[2026-01-11 19:03:20] 2026-01-12 00:02:44,322 | INFO     | sum of deviations: -3801985216.102041
[2026-01-11 19:03:20] 2026-01-12 00:02:44,322 | INFO     | mean x: 1768174492.6530612
[2026-01-11 19:03:20] 2026-01-12 00:02:44,322 | INFO     | mean y: 2877483.3469387754
[2026-01-11 19:03:20] 2026-01-12 00:02:44,322 | INFO     | intersect: 184138809536.85413
[2026-01-11 19:03:20] 2026-01-12 00:02:44,322 | INFO     | chi2: 0.487580471925055
[2026-01-11 19:03:20] 2026-01-12 00:02:44,323 | INFO     | current memory leak: -104.14 B/s (using 49 data points, chi2=0.49)
[2026-01-11 19:03:20] 2026-01-12 00:02:44,323 | INFO     | could have reported an average CPU frequency of 3218 MHz (5 samples)
[2026-01-11 19:03:20] 2026-01-12 00:02:44,323 | INFO     | ..............................
[2026-01-11 19:03:20] 2026-01-12 00:02:44,323 | INFO     | . Timing measurements:
[2026-01-11 19:03:20] 2026-01-12 00:02:44,323 | INFO     | . get job = 0 s
[2026-01-11 19:03:20] 2026-01-12 00:02:44,323 | INFO     | . initial setup = 2 s
[2026-01-11 19:03:20] 2026-01-12 00:02:44,323 | INFO     | . payload setup = 6 s
[2026-01-11 19:03:20] 2026-01-12 00:02:44,323 | INFO     | . stage-in = 0 s
[2026-01-11 19:03:20] 2026-01-12 00:02:44,323 | INFO     | . payload execution = 3420 s
[2026-01-11 19:03:20] 2026-01-12 00:02:44,323 | INFO     | . stage-out = 2 s
[2026-01-11 19:03:20] 2026-01-12 00:02:44,323 | INFO     | . log creation = 0 s
[2026-01-11 19:03:20] 2026-01-12 00:02:44,324 | INFO     | ..............................
[2026-01-11 19:03:20] 2026-01-12 00:02:44,500 | INFO     | 
[2026-01-11 19:03:20] 2026-01-12 00:02:44,500 | INFO     | job summary report
[2026-01-11 19:03:20] 2026-01-12 00:02:44,500 | INFO     | --------------------------------------------------
[2026-01-11 19:03:20] 2026-01-12 00:02:44,500 | INFO     | PanDA job id: 6966526300
[2026-01-11 19:03:20] 2026-01-12 00:02:44,500 | INFO     | task id: 47962010
[2026-01-11 19:03:20] 2026-01-12 00:02:44,500 | INFO     | errors: (none)
[2026-01-11 19:03:20] 2026-01-12 00:02:44,500 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 19:03:20] 2026-01-12 00:02:44,500 | INFO     | pilot state: finished 
[2026-01-11 19:03:20] 2026-01-12 00:02:44,500 | INFO     | transexitcode: 0
[2026-01-11 19:03:20] 2026-01-12 00:02:44,500 | INFO     | exeerrorcode: 0
[2026-01-11 19:03:20] 2026-01-12 00:02:44,500 | INFO     | exeerrordiag: 
[2026-01-11 19:03:20] 2026-01-12 00:02:44,501 | INFO     | exitcode: 0
[2026-01-11 19:03:20] 2026-01-12 00:02:44,501 | INFO     | exitmsg: OK
[2026-01-11 19:03:20] 2026-01-12 00:02:44,501 | INFO     | cpuconsumptiontime: 10046 s
[2026-01-11 19:03:20] 2026-01-12 00:02:44,501 | INFO     | nevents: 50
[2026-01-11 19:03:20] 2026-01-12 00:02:44,501 | INFO     | neventsw: 0
[2026-01-11 19:03:20] 2026-01-12 00:02:44,501 | INFO     | pid: 173291
[2026-01-11 19:03:20] 2026-01-12 00:02:44,501 | INFO     | pgrp: 173291
[2026-01-11 19:03:20] 2026-01-12 00:02:44,501 | INFO     | corecount: 11
[2026-01-11 19:03:20] 2026-01-12 00:02:44,501 | INFO     | event service: False
[2026-01-11 19:03:20] 2026-01-12 00:02:44,501 | INFO     | sizes: {0: 2283740, 1: 2284596, 5: 2284858, 12: 2284914, 3431: 2311310, 3434: 2320304, 3437: 2320488, 3456: 2320766}
[2026-01-11 19:03:20] 2026-01-12 00:02:44,501 | INFO     | --------------------------------------------------
[2026-01-11 19:03:20] 2026-01-12 00:02:44,501 | INFO     | 
[2026-01-11 19:03:20] 2026-01-12 00:02:44,501 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 19:03:20] 2026-01-12 00:02:44,641 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 19:03:20] 2026-01-12 00:02:44,642 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 19:03:20] 2026-01-12 00:02:44,642 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 19:03:20] 2026-01-12 00:02:44,642 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 19:03:20] 2026-01-12 00:02:44,642 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 19:03:20] 2026-01-12 00:02:44,642 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 19:03:20] 2026-01-12 00:02:44,642 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 19:03:20] 2026-01-12 00:02:44,642 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 19:03:20] 2026-01-12 00:02:44,642 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 19:03:20] 2026-01-12 00:02:44,642 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 19:03:20] 2026-01-12 00:02:44,642 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 19:03:20] 2026-01-12 00:02:44,642 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 19:03:20] 2026-01-12 00:02:44,642 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 19:03:20] 2026-01-12 00:02:44,642 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 19:03:20] 2026-01-12 00:02:44,642 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 19:03:20] 2026-01-12 00:02:44,642 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 19:03:20] 2026-01-12 00:02:44,642 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 19:03:20] 2026-01-12 00:02:44,643 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 19:03:20] 2026-01-12 00:02:44,643 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 19:03:20] 2026-01-12 00:02:44,643 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 19:03:20] 2026-01-12 00:02:44,643 | INFO     | job 6966526300 has completed (purged errors)
[2026-01-11 19:03:20] 2026-01-12 00:02:44,643 | INFO     | overall cleanup function is called
[2026-01-11 19:03:20] 2026-01-12 00:02:45,690 | INFO     | --- collectZombieJob: --- 10, [173291]
[2026-01-11 19:03:20] 2026-01-12 00:02:45,690 | INFO     | zombie collector waiting for pid 173291
[2026-01-11 19:03:20] 2026-01-12 00:02:45,690 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 19:03:20] 2026-01-12 00:02:45,690 | INFO     | collected zombie processes
[2026-01-11 19:03:20] 2026-01-12 00:02:45,690 | INFO     | will attempt to kill all subprocesses of pid=173291
[2026-01-11 19:03:20] 2026-01-12 00:02:46,468 | INFO     | process IDs to be killed: [173291] (in reverse order)
[2026-01-11 19:03:20] 2026-01-12 00:02:46,608 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 19:03:20] 2026-01-12 00:02:46,608 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 19:03:20] 2026-01-12 00:02:46,671 | INFO     | did not find any defunct processes belonging to 173291
[2026-01-11 19:03:20] 2026-01-12 00:02:46,683 | INFO     | did not find any defunct processes belonging to 173291
[2026-01-11 19:03:20] 2026-01-12 00:02:46,683 | INFO     | ready for new job
[2026-01-11 19:03:20] 2026-01-12 00:02:46,683 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 19:03:20] 2026-01-12 00:02:46,684 | INFO     | ***************************************
[2026-01-11 19:03:20] 2026-01-12 00:02:46,684 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 19:03:20] 2026-01-12 00:02:46,684 | INFO     | ***************************************
[2026-01-11 19:03:20] 2026-01-12 00:02:46,684 | INFO     | 
[2026-01-11 19:03:20] 2026-01-12 00:02:46,688 | INFO     | architecture information:
[2026-01-11 19:03:20] 2026-01-12 00:02:46,689 | INFO     | executing command: cat /etc/os-release
[2026-01-11 19:03:20] 2026-01-12 00:02:46,701 | INFO     | cat /etc/os-release:
[2026-01-11 19:03:20] NAME="CentOS Linux"
[2026-01-11 19:03:20] VERSION="7 (Core)"
[2026-01-11 19:03:20] ID="centos"
[2026-01-11 19:03:20] ID_LIKE="rhel fedora"
[2026-01-11 19:03:20] VERSION_ID="7"
[2026-01-11 19:03:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 19:03:20] ANSI_COLOR="0;31"
[2026-01-11 19:03:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 19:03:20] HOME_URL="https://www.centos.org/"
[2026-01-11 19:03:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 19:03:20] 
[2026-01-11 19:03:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 19:03:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 19:03:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 19:03:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 19:03:20] 
[2026-01-11 19:03:20] 2026-01-12 00:02:46,701 | INFO     | ***************************************
[2026-01-11 19:03:20] 2026-01-12 00:02:47,204 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 19:03:20] 2026-01-12 00:02:47,248 | INFO     | sufficient remaining disk space (129074462720 B)
[2026-01-11 19:03:20] 2026-01-12 00:02:47,248 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 19:03:20] 2026-01-12 00:02:47,248 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 19:03:20] 2026-01-12 00:02:47,248 | INFO     | update_server=False
[2026-01-11 19:03:20] 2026-01-12 00:02:47,248 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 19:03:20] 2026-01-12 00:02:47,249 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 19:03:20] 2026-01-12 00:02:47,249 | INFO     | aborting loop
[2026-01-11 19:03:20] 2026-01-12 00:02:47,481 | INFO     | all job control threads have been joined
[2026-01-11 19:03:20] 2026-01-12 00:02:47,742 | INFO     | all data control threads have been joined
[2026-01-11 19:03:20] 2026-01-12 00:02:47,995 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 19:03:20] 2026-01-12 00:02:48,254 | INFO     | [job] retrieve thread has finished
[2026-01-11 19:03:20] 2026-01-12 00:02:48,255 | INFO     | [job] job monitor thread has finished
[2026-01-11 19:03:20] 2026-01-12 00:02:48,330 | INFO     | all payload control threads have been joined
[2026-01-11 19:03:20] 2026-01-12 00:02:48,487 | INFO     | [job] control thread has finished
[2026-01-11 19:03:20] 2026-01-12 00:02:48,518 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 19:03:20] 2026-01-12 00:02:48,519 | INFO     | [data] copytool_in thread has finished
[2026-01-11 19:03:20] 2026-01-12 00:02:48,748 | INFO     | [data] control thread has finished
[2026-01-11 19:03:20] 2026-01-12 00:02:48,853 | INFO     | [payload] failed_post thread has finished
[2026-01-11 19:03:20] 2026-01-12 00:02:48,997 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 19:03:20] 2026-01-12 00:02:49,246 | INFO     | [job] validate thread has finished
[2026-01-11 19:03:20] 2026-01-12 00:02:49,336 | INFO     | [payload] control thread has finished
[2026-01-11 19:03:20] 2026-01-12 00:02:49,488 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 19:03:20] 2026-01-12 00:02:49,514 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 19:03:20] 2026-01-12 00:02:49,563 | INFO     | [payload] validate_post thread has finished
[2026-01-11 19:03:20] 2026-01-12 00:02:49,676 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 19:03:20] 2026-01-12 00:02:50,002 | INFO     | [data] copytool_out thread has finished
[2026-01-11 19:03:20] 2026-01-12 00:02:50,520 | INFO     | [job] queue monitor thread has finished
[2026-01-11 19:03:20] 2026-01-12 00:02:53,006 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 19:03:20] 2026-01-12 00:02:57,858 | INFO     | [monitor] cgroup control has ended
[2026-01-11 19:03:20] 2026-01-12 00:02:58,262 | INFO     | job.realtimelogging is not enabled
[2026-01-11 19:03:20] 2026-01-12 00:02:59,302 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 19:03:20] 2026-01-12 00:02:59,323 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140229305681728)>', '<ExcThread(monitor, started 140228601837312)>']
[2026-01-11 19:03:20] 2026-01-12 00:03:04,349 | INFO     | all workflow threads have been joined
[2026-01-11 19:03:20] 2026-01-12 00:03:04,352 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 19:03:20] 2026-01-12 00:03:04,352 | INFO     | traces error code: 0
[2026-01-11 19:03:20] 2026-01-12 00:03:04,352 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 19:03:20] 2026-01-12 00:03:18,288 | INFO     | PID=159297 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 19:03:20] 2026-01-12 00:03:18,291 | INFO     | .. there are 14 such processes running
[2026-01-11 19:03:20] 2026-01-12 00:03:18,291 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 19:03:20] 2026-01-12 00:03:18,291 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 19:03:20] 2026-01-12 00:03:18,291 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 19:03:20] 2026-01-12 00:03:18,292 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 19:03:20] 2026-01-12 00:03:18,292 | INFO     | [monitor] control thread has ended
[2026-01-11 19:03:20] 2026-01-12 00:03:19,013 [wrapper] ==== pilot stdout END ====
[2026-01-11 19:03:20] 2026-01-12 00:03:19,059 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 19:03:20] 2026-01-12 00:03:19,103 [wrapper] pilotpid: 159297
[2026-01-11 19:03:20] 2026-01-12 00:03:19,193 [wrapper] Pilot exit status: 0
[2026-01-11 19:03:20] 2026-01-12 00:03:19,330 [wrapper] pandaids: 6966526300
[2026-01-11 19:03:20] 2026-01-12 00:03:20,104 [wrapper] cleanup supervisor_pilot  299813 159299
[2026-01-11 19:03:20] 2026-01-12 00:03:20,143 [wrapper] Test setup, not cleaning
[2026-01-11 19:03:20] 2026-01-12 00:03:20,185 [wrapper] apfmon messages muted
[2026-01-11 19:03:20] 2026-01-12 00:03:20,223 [wrapper] ==== wrapper stdout END ====
[2026-01-11 19:03:20] 2026-01-12 00:03:20,262 [wrapper] ==== wrapper stderr END ====
[2026-01-11 19:03:20]  *** Error codes and diagnostics ***
[2026-01-11 19:03:20]     "exeErrorCode": 0,
[2026-01-11 19:03:20]     "exeErrorDiag": "",
[2026-01-11 19:03:20]     "pilotErrorCode": 0,
[2026-01-11 19:03:20]     "pilotErrorDiag": "",
[2026-01-11 19:03:20]  *** Listing of results directory ***
[2026-01-11 19:03:20] total 432444
[2026-01-11 19:03:20] -rw-r--r--. 1 boincer umatlas    579449 Jan 11 17:16 pilot3.tar.gz
[2026-01-11 19:03:20] -rwx------. 1 boincer umatlas     36322 Jan 11 18:03 runpilot2-wrapper.sh
[2026-01-11 19:03:20] -rw-r--r--. 1 boincer umatlas      5112 Jan 11 18:03 queuedata.json
[2026-01-11 19:03:20] -rw-r--r--. 1 boincer umatlas       100 Jan 11 18:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 19:03:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 18:04 run_atlas
[2026-01-11 19:03:20] -rw-r--r--. 1 boincer umatlas       105 Jan 11 18:04 job.xml
[2026-01-11 19:03:20] -rw-r--r--. 2 boincer umatlas 394439521 Jan 11 18:04 EVNT.47962006._000094.pool.root.1
[2026-01-11 19:03:20] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 18:04 start_atlas.sh
[2026-01-11 19:03:20] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 18:04 shared
[2026-01-11 19:03:20] -rw-r--r--. 2 boincer umatlas    592611 Jan 11 18:04 input.tar.gz
[2026-01-11 19:03:20] -rw-r--r--. 1 boincer umatlas         0 Jan 11 18:04 boinc_lockfile
[2026-01-11 19:03:20] -rw-r--r--. 1 boincer umatlas      2889 Jan 11 18:04 pandaJob.out
[2026-01-11 19:03:20] -rw-------. 1 boincer umatlas        57 Jan 11 18:04 setup.sh.local
[2026-01-11 19:03:20] -rw-------. 1 boincer umatlas    989946 Jan 11 18:04 agis_schedconf.cvmfs.json
[2026-01-11 19:03:20] -rw-------. 1 boincer umatlas   1516240 Jan 11 18:04 agis_ddmendpoints.agis.ALL.json
[2026-01-11 19:03:20] drwx------. 5 boincer umatlas      4096 Jan 11 18:04 pilot3
[2026-01-11 19:03:20] -rw-r--r--. 1 boincer umatlas       528 Jan 11 18:52 boinc_task_state.xml
[2026-01-11 19:03:20] -rw-r--r--. 1 boincer umatlas      6944 Jan 11 19:00 init_data.xml
[2026-01-11 19:03:20] -rw-------. 1 boincer umatlas  40486400 Jan 11 19:02 HITS.47962010._003109.pool.root.1
[2026-01-11 19:03:20] -rw-------. 1 boincer umatlas      1025 Jan 11 19:02 memory_monitor_summary.json
[2026-01-11 19:03:20] -rw-------. 1 boincer umatlas   1492309 Jan 11 19:02 log.47962010._003109.job.log.tgz.1
[2026-01-11 19:03:20] -rw-------. 1 boincer umatlas      8537 Jan 11 19:02 heartbeat.json
[2026-01-11 19:03:20] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 19:03 boinc_mmap_file
[2026-01-11 19:03:20] -rw-------. 1 boincer umatlas       822 Jan 11 19:03 pilotlog.txt
[2026-01-11 19:03:20] -rw-------. 1 boincer umatlas        95 Jan 11 19:03 pilot_heartbeat.json
[2026-01-11 19:03:20] -rw-r--r--. 1 boincer umatlas        26 Jan 11 19:03 wrapper_checkpoint.txt
[2026-01-11 19:03:20] -rw-------. 1 boincer umatlas    502234 Jan 11 19:03 log.47962010._003109.job.log.1
[2026-01-11 19:03:20] -rw-------. 1 boincer umatlas       353 Jan 11 19:03 output.list
[2026-01-11 19:03:20] -rw-r--r--. 1 boincer umatlas       620 Jan 11 19:03 runtime_log
[2026-01-11 19:03:20] -rw-------. 1 boincer umatlas   2017280 Jan 11 19:03 result.tar.gz
[2026-01-11 19:03:20] -rw-------. 1 boincer umatlas       653 Jan 11 19:03 U1NODmeeJz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm03mKDmJwfMqn.diag
[2026-01-11 19:03:20] -rw-r--r--. 1 boincer umatlas      9339 Jan 11 19:03 runtime_log.err
[2026-01-11 19:03:20] -rw-r--r--. 1 boincer umatlas      8718 Jan 11 19:03 stderr.txt
[2026-01-11 19:03:20] HITS file was successfully produced:
[2026-01-11 19:03:20] -rw-------. 1 boincer umatlas 40486400 Jan 11 19:02 shared/HITS.pool.root.1
[2026-01-11 19:03:20]  *** Contents of shared directory: ***
[2026-01-11 19:03:20] total 427308
[2026-01-11 19:03:20] -rw-r--r--. 2 boincer umatlas 394439521 Jan 11 18:04 ATLAS.root_0
[2026-01-11 19:03:20] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 18:04 start_atlas.sh
[2026-01-11 19:03:20] -rw-r--r--. 2 boincer umatlas    592611 Jan 11 18:04 input.tar.gz
[2026-01-11 19:03:20] -rw-------. 1 boincer umatlas  40486400 Jan 11 19:02 HITS.pool.root.1
[2026-01-11 19:03:20] -rw-------. 1 boincer umatlas   2017280 Jan 11 19:03 result.tar.gz
19:03:22 (152179): run_atlas exited; CPU time 10048.927599
19:03:22 (152179): called boinc_finish(0)

</stderr_txt>
]]>

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