Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:20:58 (304033): wrapper (7.7.26015): starting
17:20:58 (304033): wrapper: running run_atlas (--nthreads 9)
[2026-01-11 17:20:58] Arguments: --nthreads 9
[2026-01-11 17:20:58] Threads: 9
[2026-01-11 17:20:58] Checking for CVMFS
[2026-01-11 17:20:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 17:20:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 17:20:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 17:20:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 17:20:59] 2.13.3.0 12755 96876 384428 155031 0 65 37803311 40960000 11535 16776704 0 128897951 99.599 149179037 11800 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-11 17:20:59] CVMFS is ok
[2026-01-11 17:20:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 17:20:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 17:20:59] Further information can be found at the LHC@home message board.
[2026-01-11 17:20:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 17:20:59] Checking for apptainer binary...
[2026-01-11 17:20:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 17:20:59] Running /usr/bin/apptainer --version
[2026-01-11 17:20:59] apptainer version 1.4.5-2.el9
[2026-01-11 17:20:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 17:21:00] c7-10-13.aglt2.org
[2026-01-11 17:21:00] apptainer works
[2026-01-11 17:21:00] Set ATHENA_PROC_NUMBER=9
[2026-01-11 17:21:00] Set ATHENA_CORE_NUMBER=9
[2026-01-11 17:21:00] Starting ATLAS job with PandaID=6966508622
[2026-01-11 17:21:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 00:46:16]  *** The last 200 lines of the pilot log: ***
[2026-01-12 00:46:16] 2026-01-12 05:45:20,345 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6966508622/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 00:46:16] 2026-01-12 05:45:20,902 | INFO     | number of running child processes to parent process 315541: 1
[2026-01-12 00:46:16] 2026-01-12 05:45:20,902 | INFO     | maximum number of monitored processes: 17
[2026-01-12 00:46:16] 2026-01-12 05:45:21,502 | INFO     | time since job start (26638s) is within the limit (349056.0s)
[2026-01-12 00:46:16] 2026-01-12 05:45:23,406 | INFO     | monitor loop #1627: job 0:6966508622 is in state 'finished'
[2026-01-12 00:46:16] 2026-01-12 05:45:23,406 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 00:46:16] 2026-01-12 05:45:23,508 | INFO     | time since job start (26640s) is within the limit (349056.0s)
[2026-01-12 00:46:16] 2026-01-12 05:45:25,515 | INFO     | time since job start (26642s) is within the limit (349056.0s)
[2026-01-12 00:46:16] 2026-01-12 05:45:25,516 | INFO     | 26645s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-12 00:46:16] 2026-01-12 05:45:25,910 | INFO     | monitor loop #1628: job 0:6966508622 is in state 'finished'
[2026-01-12 00:46:16] 2026-01-12 05:45:25,911 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-12 00:46:16] 2026-01-12 05:45:26,505 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 00:46:16] 2026-01-12 05:45:26,521 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3276.5870156250016
[2026-01-12 00:46:16] 2026-01-12 05:45:26,555 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6966508622/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 00:46:16] 2026-01-12 05:45:26,556 | INFO     | extracted standard info from prmon json
[2026-01-12 00:46:16] 2026-01-12 05:45:26,556 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 00:46:16] 2026-01-12 05:45:26,556 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 00:46:16] 2026-01-12 05:45:26,577 | INFO     | fitting pss+swap vs Time
[2026-01-12 00:46:16] 2026-01-12 05:45:26,578 | INFO     | sum of square deviations: 25700378322.559643
[2026-01-12 00:46:16] 2026-01-12 05:45:26,596 | INFO     | sum of deviations: 63618514708.95408
[2026-01-12 00:46:16] 2026-01-12 05:45:26,596 | INFO     | mean x: 1768183400.6009173
[2026-01-12 00:46:16] 2026-01-12 05:45:26,597 | INFO     | mean y: 2616512.1146788993
[2026-01-12 00:46:16] 2026-01-12 05:45:26,597 | INFO     | intersect: -4374330794.552613
[2026-01-12 00:46:16] 2026-01-12 05:45:26,598 | INFO     | chi2: 12.462250945543769
[2026-01-12 00:46:16] 2026-01-12 05:45:26,600 | INFO     | sum of square deviations: 24826709128.923462
[2026-01-12 00:46:16] 2026-01-12 05:45:26,617 | INFO     | sum of deviations: 195549307693.41467
[2026-01-12 00:46:16] 2026-01-12 05:45:26,617 | INFO     | mean x: 1768183248.136891
[2026-01-12 00:46:16] 2026-01-12 05:45:26,618 | INFO     | mean y: 2639536.77262181
[2026-01-12 00:46:16] 2026-01-12 05:45:26,618 | INFO     | intersect: -13924579260.23817
[2026-01-12 00:46:16] 2026-01-12 05:45:26,619 | INFO     | chi2: 9.349962486731721
[2026-01-12 00:46:16] 2026-01-12 05:45:26,620 | INFO     | current chi2=9.349962486731721 (change=24.973726435230663 %)
[2026-01-12 00:46:16] 2026-01-12 05:45:26,620 | INFO     | right removable region: 430
[2026-01-12 00:46:16] 2026-01-12 05:45:26,621 | INFO     | sum of square deviations: 24825884408.923454
[2026-01-12 00:46:16] 2026-01-12 05:45:26,639 | INFO     | sum of deviations: -78639032866.16252
[2026-01-12 00:46:16] 2026-01-12 05:45:26,639 | INFO     | mean x: 1768183553.136891
[2026-01-12 00:46:16] 2026-01-12 05:45:26,639 | INFO     | mean y: 2641318.7146171695
[2026-01-12 00:46:16] 2026-01-12 05:45:26,639 | INFO     | intersect: 5603579527.327248
[2026-01-12 00:46:16] 2026-01-12 05:45:26,641 | INFO     | chi2: 8.955527055039276
[2026-01-12 00:46:16] 2026-01-12 05:45:26,641 | INFO     | current chi2=8.955527055039276 (change=28.138768075107816 %)
[2026-01-12 00:46:16] 2026-01-12 05:45:26,642 | INFO     | sum of square deviations: 23971437381.645668
[2026-01-12 00:46:16] 2026-01-12 05:45:26,659 | INFO     | sum of deviations: -181257978901.92972
[2026-01-12 00:46:16] 2026-01-12 05:45:26,660 | INFO     | mean x: 1768183705.673709
[2026-01-12 00:46:16] 2026-01-12 05:45:26,660 | INFO     | mean y: 2659617.3098591547
[2026-01-12 00:46:16] 2026-01-12 05:45:26,660 | INFO     | intersect: 13372629874.626925
[2026-01-12 00:46:16] 2026-01-12 05:45:26,662 | INFO     | chi2: 7.1350456841178485
[2026-01-12 00:46:16] 2026-01-12 05:45:26,662 | INFO     | current chi2=7.1350456841178485 (change=20.328020447406754 %)
[2026-01-12 00:46:16] 2026-01-12 05:45:26,662 | INFO     | left removable region: 20
[2026-01-12 00:46:16] 2026-01-12 05:45:26,663 | INFO     | sum of square deviations: 21370584000.575546
[2026-01-12 00:46:16] 2026-01-12 05:45:26,679 | INFO     | sum of deviations: -78933208554.77066
[2026-01-12 00:46:16] 2026-01-12 05:45:26,679 | INFO     | mean x: 1768183827.7609756
[2026-01-12 00:46:16] 2026-01-12 05:45:26,680 | INFO     | mean y: 2700236.7268292685
[2026-01-12 00:46:16] 2026-01-12 05:45:26,680 | INFO     | intersect: 6533566348.578099
[2026-01-12 00:46:16] 2026-01-12 05:45:26,681 | INFO     | chi2: 2.6201806554482405
[2026-01-12 00:46:16] 2026-01-12 05:45:26,682 | INFO     | current memory leak: -3.69 B/s (using 410 data points, chi2=2.62)
[2026-01-12 00:46:16] 2026-01-12 05:45:26,682 | INFO     | could have reported an average CPU frequency of 3289 MHz (18 samples)
[2026-01-12 00:46:16] 2026-01-12 05:45:26,683 | INFO     | ..............................
[2026-01-12 00:46:16] 2026-01-12 05:45:26,683 | INFO     | . Timing measurements:
[2026-01-12 00:46:16] 2026-01-12 05:45:26,683 | INFO     | . get job = 0 s
[2026-01-12 00:46:16] 2026-01-12 05:45:26,683 | INFO     | . initial setup = 3 s
[2026-01-12 00:46:16] 2026-01-12 05:45:26,683 | INFO     | . payload setup = 14 s
[2026-01-12 00:46:16] 2026-01-12 05:45:26,683 | INFO     | . stage-in = 0 s
[2026-01-12 00:46:16] 2026-01-12 05:45:26,684 | INFO     | . payload execution = 26591 s
[2026-01-12 00:46:16] 2026-01-12 05:45:26,684 | INFO     | . stage-out = 3 s
[2026-01-12 00:46:16] 2026-01-12 05:45:26,684 | INFO     | . log creation = 0 s
[2026-01-12 00:46:16] 2026-01-12 05:45:26,684 | INFO     | ..............................
[2026-01-12 00:46:16] 2026-01-12 05:45:26,918 | INFO     | 
[2026-01-12 00:46:16] 2026-01-12 05:45:26,919 | INFO     | job summary report
[2026-01-12 00:46:16] 2026-01-12 05:45:26,919 | INFO     | --------------------------------------------------
[2026-01-12 00:46:16] 2026-01-12 05:45:26,919 | INFO     | PanDA job id: 6966508622
[2026-01-12 00:46:16] 2026-01-12 05:45:26,919 | INFO     | task id: 47962010
[2026-01-12 00:46:16] 2026-01-12 05:45:26,920 | INFO     | errors: (none)
[2026-01-12 00:46:16] 2026-01-12 05:45:26,920 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 00:46:16] 2026-01-12 05:45:26,920 | INFO     | pilot state: finished 
[2026-01-12 00:46:16] 2026-01-12 05:45:26,920 | INFO     | transexitcode: 0
[2026-01-12 00:46:16] 2026-01-12 05:45:26,920 | INFO     | exeerrorcode: 0
[2026-01-12 00:46:16] 2026-01-12 05:45:26,920 | INFO     | exeerrordiag: 
[2026-01-12 00:46:16] 2026-01-12 05:45:26,920 | INFO     | exitcode: 0
[2026-01-12 00:46:16] 2026-01-12 05:45:26,921 | INFO     | exitmsg: OK
[2026-01-12 00:46:16] 2026-01-12 05:45:26,921 | INFO     | cpuconsumptiontime: 40160 s
[2026-01-12 00:46:16] 2026-01-12 05:45:26,921 | INFO     | nevents: 50
[2026-01-12 00:46:16] 2026-01-12 05:45:26,921 | INFO     | neventsw: 0
[2026-01-12 00:46:16] 2026-01-12 05:45:26,921 | INFO     | pid: 315541
[2026-01-12 00:46:16] 2026-01-12 05:45:26,921 | INFO     | pgrp: 315541
[2026-01-12 00:46:16] 2026-01-12 05:45:26,922 | INFO     | corecount: 9
[2026-01-12 00:46:16] 2026-01-12 05:45:26,922 | INFO     | event service: False
[2026-01-12 00:46:16] 2026-01-12 05:45:26,922 | INFO     | sizes: {0: 2283687, 1: 2284372, 2: 2284571, 12: 2284833, 13: 2284861, 26607: 2322081, 26608: 2322208, 26612: 2331314, 26621: 2331504}
[2026-01-12 00:46:16] 2026-01-12 05:45:26,922 | INFO     | --------------------------------------------------
[2026-01-12 00:46:16] 2026-01-12 05:45:26,922 | INFO     | 
[2026-01-12 00:46:16] 2026-01-12 05:45:26,922 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-12 00:46:16] 2026-01-12 05:45:26,966 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 00:46:16] 2026-01-12 05:45:26,967 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 00:46:16] 2026-01-12 05:45:26,967 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 00:46:16] 2026-01-12 05:45:26,967 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 00:46:16] 2026-01-12 05:45:26,967 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 00:46:16] 2026-01-12 05:45:26,967 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 00:46:16] 2026-01-12 05:45:26,968 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 00:46:16] 2026-01-12 05:45:26,968 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 00:46:16] 2026-01-12 05:45:26,968 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 00:46:16] 2026-01-12 05:45:26,968 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 00:46:16] 2026-01-12 05:45:26,968 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 00:46:16] 2026-01-12 05:45:26,969 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 00:46:16] 2026-01-12 05:45:26,969 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 00:46:16] 2026-01-12 05:45:26,969 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 00:46:16] 2026-01-12 05:45:26,969 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 00:46:16] 2026-01-12 05:45:26,969 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 00:46:16] 2026-01-12 05:45:26,969 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 00:46:16] 2026-01-12 05:45:26,969 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 00:46:16] 2026-01-12 05:45:26,970 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 00:46:16] 2026-01-12 05:45:26,970 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 00:46:16] 2026-01-12 05:45:26,970 | INFO     | job 6966508622 has completed (purged errors)
[2026-01-12 00:46:16] 2026-01-12 05:45:26,970 | INFO     | overall cleanup function is called
[2026-01-12 00:46:16] 2026-01-12 05:45:28,000 | INFO     | --- collectZombieJob: --- 10, [315541]
[2026-01-12 00:46:16] 2026-01-12 05:45:28,000 | INFO     | zombie collector waiting for pid 315541
[2026-01-12 00:46:16] 2026-01-12 05:45:28,001 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 00:46:16] 2026-01-12 05:45:28,001 | INFO     | collected zombie processes
[2026-01-12 00:46:16] 2026-01-12 05:45:28,001 | INFO     | will attempt to kill all subprocesses of pid=315541
[2026-01-12 00:46:16] 2026-01-12 05:45:28,570 | INFO     | process IDs to be killed: [315541] (in reverse order)
[2026-01-12 00:46:16] 2026-01-12 05:45:28,712 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 00:46:16] 2026-01-12 05:45:28,712 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 00:46:16] 2026-01-12 05:45:28,725 | INFO     | did not find any defunct processes belonging to 315541
[2026-01-12 00:46:16] 2026-01-12 05:45:28,736 | INFO     | did not find any defunct processes belonging to 315541
[2026-01-12 00:46:16] 2026-01-12 05:45:28,737 | INFO     | ready for new job
[2026-01-12 00:46:16] 2026-01-12 05:45:28,737 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 00:46:16] 2026-01-12 05:45:28,740 | INFO     | ***************************************
[2026-01-12 00:46:16] 2026-01-12 05:45:28,740 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 00:46:16] 2026-01-12 05:45:28,740 | INFO     | ***************************************
[2026-01-12 00:46:16] 2026-01-12 05:45:28,740 | INFO     | 
[2026-01-12 00:46:16] 2026-01-12 05:45:28,746 | INFO     | architecture information:
[2026-01-12 00:46:16] 2026-01-12 05:45:28,747 | INFO     | executing command: cat /etc/os-release
[2026-01-12 00:46:16] 2026-01-12 05:45:28,764 | INFO     | cat /etc/os-release:
[2026-01-12 00:46:16] NAME="CentOS Linux"
[2026-01-12 00:46:16] VERSION="7 (Core)"
[2026-01-12 00:46:16] ID="centos"
[2026-01-12 00:46:16] ID_LIKE="rhel fedora"
[2026-01-12 00:46:16] VERSION_ID="7"
[2026-01-12 00:46:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 00:46:16] ANSI_COLOR="0;31"
[2026-01-12 00:46:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 00:46:16] HOME_URL="https://www.centos.org/"
[2026-01-12 00:46:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 00:46:16] 
[2026-01-12 00:46:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 00:46:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 00:46:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 00:46:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 00:46:16] 
[2026-01-12 00:46:16] 2026-01-12 05:45:28,765 | INFO     | ***************************************
[2026-01-12 00:46:16] 2026-01-12 05:45:29,268 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-12 00:46:16] 2026-01-12 05:45:29,309 | INFO     | sufficient remaining disk space (86250618880 B)
[2026-01-12 00:46:16] 2026-01-12 05:45:29,310 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 00:46:16] 2026-01-12 05:45:29,311 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 00:46:16] 2026-01-12 05:45:29,311 | INFO     | update_server=False
[2026-01-12 00:46:16] 2026-01-12 05:45:29,311 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 00:46:16] 2026-01-12 05:45:29,330 | INFO     | all job control threads have been joined
[2026-01-12 00:46:16] 2026-01-12 05:45:29,427 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 00:46:16] 2026-01-12 05:45:29,427 | INFO     | aborting loop
[2026-01-12 00:46:16] 2026-01-12 05:45:29,990 | INFO     | all payload control threads have been joined
[2026-01-12 00:46:16] 2026-01-12 05:45:30,231 | INFO     | all data control threads have been joined
[2026-01-12 00:46:16] 2026-01-12 05:45:30,316 | INFO     | [job] retrieve thread has finished
[2026-01-12 00:46:16] 2026-01-12 05:45:30,335 | INFO     | [job] control thread has finished
[2026-01-12 00:46:16] 2026-01-12 05:45:30,433 | INFO     | [job] job monitor thread has finished
[2026-01-12 00:46:16] 2026-01-12 05:45:30,482 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 00:46:16] 2026-01-12 05:45:30,485 | INFO     | [data] copytool_in thread has finished
[2026-01-12 00:46:16] 2026-01-12 05:45:30,486 | INFO     | [payload] validate_post thread has finished
[2026-01-12 00:46:16] 2026-01-12 05:45:30,527 | INFO     | [job] validate thread has finished
[2026-01-12 00:46:16] 2026-01-12 05:45:30,584 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 00:46:16] 2026-01-12 05:45:30,996 | INFO     | [payload] control thread has finished
[2026-01-12 00:46:16] 2026-01-12 05:45:31,109 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 00:46:16] 2026-01-12 05:45:31,236 | INFO     | [data] control thread has finished
[2026-01-12 00:46:16] 2026-01-12 05:45:31,650 | INFO     | [payload] failed_post thread has finished
[2026-01-12 00:46:16] 2026-01-12 05:45:31,751 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 00:46:16] 2026-01-12 05:45:31,797 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 00:46:16] 2026-01-12 05:45:31,927 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 00:46:16] 2026-01-12 05:45:32,591 | INFO     | [data] copytool_out thread has finished
[2026-01-12 00:46:16] 2026-01-12 05:45:32,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 00:46:16] 2026-01-12 05:45:32,933 | INFO     | [job] queue monitor thread has finished
[2026-01-12 00:46:16] 2026-01-12 05:45:36,810 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 00:46:16] 2026-01-12 05:45:59,319 | INFO     | PID=307961 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-12 00:46:16] 2026-01-12 05:45:59,320 | INFO     | .. there are 9 such processes running
[2026-01-12 00:46:16] 2026-01-12 05:45:59,321 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 00:46:16] 2026-01-12 05:45:59,321 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 00:46:16] 2026-01-12 05:45:59,322 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 00:46:16] 2026-01-12 05:46:08,652 | INFO     | [monitor] cgroup control has ended
[2026-01-12 00:46:16] 2026-01-12 05:46:10,697 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140119510792000)>', '<ExcThread(monitor, started 140119229040384)>']
[2026-01-12 00:46:16] 2026-01-12 05:46:11,388 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 00:46:16] 2026-01-12 05:46:11,388 | INFO     | [monitor] control thread has ended
[2026-01-12 00:46:16] 2026-01-12 05:46:15,722 | INFO     | all workflow threads have been joined
[2026-01-12 00:46:16] 2026-01-12 05:46:15,723 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 00:46:16] 2026-01-12 05:46:15,723 | INFO     | traces error code: 0
[2026-01-12 00:46:16] 2026-01-12 05:46:15,724 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 00:46:16] 2026-01-12 05:46:15,950 [wrapper] ==== pilot stdout END ====
[2026-01-12 00:46:16] 2026-01-12 05:46:15,957 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 00:46:16] 2026-01-12 05:46:15,963 [wrapper] pilotpid: 307961
[2026-01-12 00:46:16] 2026-01-12 05:46:15,969 [wrapper] Pilot exit status: 0
[2026-01-12 00:46:16] 2026-01-12 05:46:16,004 [wrapper] pandaids: 6966508622
[2026-01-12 00:46:16] 2026-01-12 05:46:16,178 [wrapper] cleanup supervisor_pilot  803539 307962
[2026-01-12 00:46:16] 2026-01-12 05:46:16,184 [wrapper] Test setup, not cleaning
[2026-01-12 00:46:16] 2026-01-12 05:46:16,190 [wrapper] apfmon messages muted
[2026-01-12 00:46:16] 2026-01-12 05:46:16,198 [wrapper] ==== wrapper stdout END ====
[2026-01-12 00:46:16] 2026-01-12 05:46:16,203 [wrapper] ==== wrapper stderr END ====
[2026-01-12 00:46:16]  *** Error codes and diagnostics ***
[2026-01-12 00:46:16]     "exeErrorCode": 0,
[2026-01-12 00:46:16]     "exeErrorDiag": "",
[2026-01-12 00:46:16]     "pilotErrorCode": 0,
[2026-01-12 00:46:16]     "pilotErrorDiag": "",
[2026-01-12 00:46:16]  *** Listing of results directory ***
[2026-01-12 00:46:16] total 439112
[2026-01-12 00:46:16] -rw-r--r--. 1 boincer umatlas      5112 Jan 11 17:16 queuedata.json
[2026-01-12 00:46:16] -rw-r--r--. 1 boincer umatlas    579449 Jan 11 17:16 pilot3.tar.gz
[2026-01-12 00:46:16] -rwx------. 1 boincer umatlas     36322 Jan 11 17:20 runpilot2-wrapper.sh
[2026-01-12 00:46:16] -rw-r--r--. 1 boincer umatlas       100 Jan 11 17:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 00:46:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 17:20 run_atlas
[2026-01-12 00:46:16] -rw-r--r--. 1 boincer umatlas       105 Jan 11 17:20 job.xml
[2026-01-12 00:46:16] -rw-r--r--. 2 boincer umatlas 393484406 Jan 11 17:20 EVNT.47962006._000060.pool.root.1
[2026-01-12 00:46:16] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 17:20 start_atlas.sh
[2026-01-12 00:46:16] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 17:20 shared
[2026-01-12 00:46:16] -rw-r--r--. 2 boincer umatlas    592617 Jan 11 17:20 input.tar.gz
[2026-01-12 00:46:16] -rw-r--r--. 1 boincer umatlas         0 Jan 11 17:20 boinc_lockfile
[2026-01-12 00:46:16] -rw-r--r--. 1 boincer umatlas      2887 Jan 11 17:21 pandaJob.out
[2026-01-12 00:46:16] -rw-------. 1 boincer umatlas        57 Jan 11 17:21 setup.sh.local
[2026-01-12 00:46:16] -rw-------. 1 boincer umatlas    989946 Jan 11 17:21 agis_schedconf.cvmfs.json
[2026-01-12 00:46:16] drwx------. 5 boincer umatlas      4096 Jan 11 17:21 pilot3
[2026-01-12 00:46:16] -rw-r--r--. 1 boincer umatlas       531 Jan 12 00:10 boinc_task_state.xml
[2026-01-12 00:46:16] -rw-r--r--. 1 boincer umatlas      6902 Jan 12 00:37 init_data.xml
[2026-01-12 00:46:16] -rw-------. 1 boincer umatlas  42216803 Jan 12 00:44 HITS.47962010._003101.pool.root.1
[2026-01-12 00:46:16] -rw-------. 1 boincer umatlas      1029 Jan 12 00:45 memory_monitor_summary.json
[2026-01-12 00:46:16] -rw-------. 1 boincer umatlas   1516240 Jan 12 00:45 agis_ddmendpoints.agis.ALL.json
[2026-01-12 00:46:16] -rw-------. 1 boincer umatlas   1580638 Jan 12 00:45 log.47962010._003101.job.log.tgz.1
[2026-01-12 00:46:16] -rw-------. 1 boincer umatlas      8539 Jan 12 00:45 heartbeat.json
[2026-01-12 00:46:16] -rw-------. 1 boincer umatlas        95 Jan 12 00:45 pilot_heartbeat.json
[2026-01-12 00:46:16] -rw-------. 1 boincer umatlas      4822 Jan 12 00:46 pilotlog.txt
[2026-01-12 00:46:16] -rw-r--r--. 1 boincer umatlas      8192 Jan 12 00:46 boinc_mmap_file
[2026-01-12 00:46:16] -rw-r--r--. 1 boincer umatlas        28 Jan 12 00:46 wrapper_checkpoint.txt
[2026-01-12 00:46:16] -rw-------. 1 boincer umatlas   3435747 Jan 12 00:46 log.47962010._003101.job.log.1
[2026-01-12 00:46:16] -rw-------. 1 boincer umatlas       353 Jan 12 00:46 output.list
[2026-01-12 00:46:16] -rw-r--r--. 1 boincer umatlas       620 Jan 12 00:46 runtime_log
[2026-01-12 00:46:16] -rw-------. 1 boincer umatlas   5038080 Jan 12 00:46 result.tar.gz
[2026-01-12 00:46:16] -rw-------. 1 boincer umatlas       657 Jan 12 00:46 xskMDmSyIz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmt3mKDm5AhpLm.diag
[2026-01-12 00:46:16] -rw-r--r--. 1 boincer umatlas      9343 Jan 12 00:46 runtime_log.err
[2026-01-12 00:46:16] -rw-r--r--. 1 boincer umatlas     21478 Jan 12 00:46 stderr.txt
[2026-01-12 00:46:16] HITS file was successfully produced:
[2026-01-12 00:46:16] -rw-------. 1 boincer umatlas 42216803 Jan 12 00:44 shared/HITS.pool.root.1
[2026-01-12 00:46:16]  *** Contents of shared directory: ***
[2026-01-12 00:46:16] total 431012
[2026-01-12 00:46:16] -rw-r--r--. 2 boincer umatlas 393484406 Jan 11 17:20 ATLAS.root_0
[2026-01-12 00:46:16] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 17:20 start_atlas.sh
[2026-01-12 00:46:16] -rw-r--r--. 2 boincer umatlas    592617 Jan 11 17:20 input.tar.gz
[2026-01-12 00:46:16] -rw-------. 1 boincer umatlas  42216803 Jan 12 00:44 HITS.pool.root.1
[2026-01-12 00:46:16] -rw-------. 1 boincer umatlas   5038080 Jan 12 00:46 result.tar.gz
00:46:18 (304033): run_atlas exited; CPU time 40501.839124
00:46:18 (304033): called boinc_finish(0)

</stderr_txt>
]]>

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