Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:12:21 (25777): wrapper (7.7.26015): starting
05:12:21 (25777): wrapper: running run_atlas (--nthreads 8)
[2026-01-12 05:12:21] Arguments: --nthreads 8
[2026-01-12 05:12:21] Threads: 8
[2026-01-12 05:12:21] Checking for CVMFS
[2026-01-12 05:12:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-12 05:12:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-12 05:12:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-12 05:12:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-12 05:12:24] 2.11.2.0 3018 39216 128548 155038 0 60 18928240 25165825 96 130560 0 16562642 99.827 10507037 3321 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-12 05:12:24] CVMFS is ok
[2026-01-12 05:12:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-12 05:12:24] Checking for apptainer binary...
[2026-01-12 05:12:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-12 05:12:24] Running /usr/bin/apptainer --version
[2026-01-12 05:12:24] apptainer version 1.3.2-1.el7
[2026-01-12 05:12:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-12 05:12:45] cg-vwn451.simple-grid.lan
[2026-01-12 05:12:45] apptainer works
[2026-01-12 05:12:45] Set ATHENA_PROC_NUMBER=8
[2026-01-12 05:12:45] Set ATHENA_CORE_NUMBER=8
[2026-01-12 05:12:45] Starting ATLAS job with PandaID=6963162310
[2026-01-12 05:12:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/26 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 11:08:55]  *** The last 200 lines of the pilot log: ***
[2026-01-12 11:08:55] 2026-01-12 10:08:01,364 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-12 11:08:55] 2026-01-12 10:08:01,366 | INFO     | using path: /var/lib/boinc/slots/26/PanDA_Pilot-6963162310/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 11:08:55] 2026-01-12 10:08:01,367 | INFO     | extracted standard info from prmon json
[2026-01-12 11:08:55] 2026-01-12 10:08:01,367 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 11:08:55] 2026-01-12 10:08:01,367 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 11:08:55] 2026-01-12 10:08:01,367 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 11:08:55] 2026-01-12 10:08:01,367 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 11:08:55] 2026-01-12 10:08:01,375 | INFO     | fitting pss+swap vs Time
[2026-01-12 11:08:55] 2026-01-12 10:08:01,376 | INFO     | sum of square deviations: 11657595320.0
[2026-01-12 11:08:55] 2026-01-12 10:08:01,379 | INFO     | sum of deviations: 104032262241.99997
[2026-01-12 11:08:55] 2026-01-12 10:08:01,380 | INFO     | mean x: 1768202144.0
[2026-01-12 11:08:55] 2026-01-12 10:08:01,380 | INFO     | mean y: 2468018.32238806
[2026-01-12 11:08:55] 2026-01-12 10:08:01,380 | INFO     | intersect: -15776949957.002783
[2026-01-12 11:08:55] 2026-01-12 10:08:01,380 | INFO     | chi2: 7.489667365329087
[2026-01-12 11:08:55] 2026-01-12 10:08:01,381 | INFO     | sum of square deviations: 11143362422.5
[2026-01-12 11:08:55] 2026-01-12 10:08:01,385 | INFO     | sum of deviations: 124437560183.00005
[2026-01-12 11:08:55] 2026-01-12 10:08:01,385 | INFO     | mean x: 1768201991.5
[2026-01-12 11:08:55] 2026-01-12 10:08:01,385 | INFO     | mean y: 2473990.090909091
[2026-01-12 11:08:55] 2026-01-12 10:08:01,385 | INFO     | intersect: -19742979257.36958
[2026-01-12 11:08:55] 2026-01-12 10:08:01,386 | INFO     | chi2: 6.771411023053857
[2026-01-12 11:08:55] 2026-01-12 10:08:01,386 | INFO     | current chi2=6.771411023053857 (change=9.589963175135887 %)
[2026-01-12 11:08:55] 2026-01-12 10:08:01,386 | INFO     | right removable region: 329
[2026-01-12 11:08:55] 2026-01-12 10:08:01,387 | INFO     | sum of square deviations: 11143362422.5
[2026-01-12 11:08:55] 2026-01-12 10:08:01,390 | INFO     | sum of deviations: -14350292578.000008
[2026-01-12 11:08:55] 2026-01-12 10:08:01,391 | INFO     | mean x: 1768202296.5
[2026-01-12 11:08:55] 2026-01-12 10:08:01,391 | INFO     | mean y: 2503107.6666666665
[2026-01-12 11:08:55] 2026-01-12 10:08:01,391 | INFO     | intersect: 2279573468.461218
[2026-01-12 11:08:55] 2026-01-12 10:08:01,391 | INFO     | chi2: 2.654576629843447
[2026-01-12 11:08:55] 2026-01-12 10:08:01,392 | INFO     | current chi2=2.654576629843447 (change=64.55681540502155 %)
[2026-01-12 11:08:55] 2026-01-12 10:08:01,392 | INFO     | sum of square deviations: 10644478650.0
[2026-01-12 11:08:55] 2026-01-12 10:08:01,396 | INFO     | sum of deviations: -77956850271.99995
[2026-01-12 11:08:55] 2026-01-12 10:08:01,396 | INFO     | mean x: 1768202449.0
[2026-01-12 11:08:55] 2026-01-12 10:08:01,396 | INFO     | mean y: 2522479.6492307694
[2026-01-12 11:08:55] 2026-01-12 10:08:01,396 | INFO     | intersect: 12952287151.052525
[2026-01-12 11:08:55] 2026-01-12 10:08:01,397 | INFO     | chi2: 1.053198731481587
[2026-01-12 11:08:55] 2026-01-12 10:08:01,397 | INFO     | current chi2=1.053198731481587 (change=60.32517126681331 %)
[2026-01-12 11:08:55] 2026-01-12 10:08:01,398 | INFO     | sum of square deviations: 10160711440.0
[2026-01-12 11:08:55] 2026-01-12 10:08:01,401 | INFO     | sum of deviations: -84997389202.99998
[2026-01-12 11:08:55] 2026-01-12 10:08:01,401 | INFO     | mean x: 1768202601.5
[2026-01-12 11:08:55] 2026-01-12 10:08:01,401 | INFO     | mean y: 2524691.61875
[2026-01-12 11:08:55] 2026-01-12 10:08:01,402 | INFO     | intersect: 14794068137.857252
[2026-01-12 11:08:55] 2026-01-12 10:08:01,402 | INFO     | chi2: 1.015737232174069
[2026-01-12 11:08:55] 2026-01-12 10:08:01,402 | INFO     | current chi2=1.015737232174069 (change=3.5569259806094733 %)
[2026-01-12 11:08:55] 2026-01-12 10:08:01,402 | INFO     | left removable region: 30
[2026-01-12 11:08:55] 2026-01-12 10:08:01,403 | INFO     | sum of square deviations: 8288713550.0
[2026-01-12 11:08:55] 2026-01-12 10:08:01,406 | INFO     | sum of deviations: -39718475245.0
[2026-01-12 11:08:55] 2026-01-12 10:08:01,406 | INFO     | mean x: 1768202876.0
[2026-01-12 11:08:55] 2026-01-12 10:08:01,406 | INFO     | mean y: 2523814.4682274247
[2026-01-12 11:08:55] 2026-01-12 10:08:01,407 | INFO     | intersect: 8475530118.147741
[2026-01-12 11:08:55] 2026-01-12 10:08:01,407 | INFO     | chi2: 0.18219193774037273
[2026-01-12 11:08:55] 2026-01-12 10:08:01,407 | INFO     | current memory leak: -4.79 B/s (using 299 data points, chi2=0.18)
[2026-01-12 11:08:55] 2026-01-12 10:08:01,408 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-12 11:08:55] 2026-01-12 10:08:01,408 | INFO     | ..............................
[2026-01-12 11:08:55] 2026-01-12 10:08:01,408 | INFO     | . Timing measurements:
[2026-01-12 11:08:55] 2026-01-12 10:08:01,408 | INFO     | . get job = 0 s
[2026-01-12 11:08:55] 2026-01-12 10:08:01,409 | INFO     | . initial setup = 7 s
[2026-01-12 11:08:55] 2026-01-12 10:08:01,409 | INFO     | . payload setup = 147 s
[2026-01-12 11:08:55] 2026-01-12 10:08:01,409 | INFO     | . stage-in = 0 s
[2026-01-12 11:08:55] 2026-01-12 10:08:01,409 | INFO     | . payload execution = 20561 s
[2026-01-12 11:08:55] 2026-01-12 10:08:01,409 | INFO     | . stage-out = 4 s
[2026-01-12 11:08:55] 2026-01-12 10:08:01,409 | INFO     | . log creation = 1 s
[2026-01-12 11:08:55] 2026-01-12 10:08:01,409 | INFO     | ..............................
[2026-01-12 11:08:55] 2026-01-12 10:08:01,542 | INFO     | 
[2026-01-12 11:08:55] 2026-01-12 10:08:01,542 | INFO     | job summary report
[2026-01-12 11:08:55] 2026-01-12 10:08:01,542 | INFO     | --------------------------------------------------
[2026-01-12 11:08:55] 2026-01-12 10:08:01,542 | INFO     | PanDA job id: 6963162310
[2026-01-12 11:08:55] 2026-01-12 10:08:01,542 | INFO     | task id: 47898826
[2026-01-12 11:08:55] 2026-01-12 10:08:01,542 | INFO     | errors: (none)
[2026-01-12 11:08:55] 2026-01-12 10:08:01,543 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 11:08:55] 2026-01-12 10:08:01,543 | INFO     | pilot state: finished 
[2026-01-12 11:08:55] 2026-01-12 10:08:01,543 | INFO     | transexitcode: 0
[2026-01-12 11:08:55] 2026-01-12 10:08:01,543 | INFO     | exeerrorcode: 0
[2026-01-12 11:08:55] 2026-01-12 10:08:01,543 | INFO     | exeerrordiag: 
[2026-01-12 11:08:55] 2026-01-12 10:08:01,543 | INFO     | exitcode: 0
[2026-01-12 11:08:55] 2026-01-12 10:08:01,543 | INFO     | exitmsg: OK
[2026-01-12 11:08:55] 2026-01-12 10:08:01,543 | INFO     | cpuconsumptiontime: 77133 s
[2026-01-12 11:08:55] 2026-01-12 10:08:01,543 | INFO     | nevents: 400
[2026-01-12 11:08:55] 2026-01-12 10:08:01,544 | INFO     | neventsw: 0
[2026-01-12 11:08:55] 2026-01-12 10:08:01,544 | INFO     | pid: 3606
[2026-01-12 11:08:55] 2026-01-12 10:08:01,544 | INFO     | pgrp: 3606
[2026-01-12 11:08:55] 2026-01-12 10:08:01,544 | INFO     | corecount: 8
[2026-01-12 11:08:55] 2026-01-12 10:08:01,544 | INFO     | event service: False
[2026-01-12 11:08:55] 2026-01-12 10:08:01,544 | INFO     | sizes: {0: 2283142, 1: 2283828, 2: 2284027, 13: 2284027, 23: 2284083, 34: 2284111, 45: 2284267, 56: 2284295, 66: 2284323, 77: 2284351, 88: 2284407, 98: 2284715, 10
[2026-01-12 11:08:55] 2026-01-12 10:08:01,544 | INFO     | --------------------------------------------------
[2026-01-12 11:08:55] 2026-01-12 10:08:01,544 | INFO     | 
[2026-01-12 11:08:55] 2026-01-12 10:08:01,545 | INFO     | executing command: ls -lF /var/lib/boinc/slots/26
[2026-01-12 11:08:55] 2026-01-12 10:08:02,103 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 11:08:55] 2026-01-12 10:08:02,104 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 11:08:55] 2026-01-12 10:08:02,104 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 11:08:55] 2026-01-12 10:08:02,104 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 11:08:55] 2026-01-12 10:08:02,104 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 11:08:55] 2026-01-12 10:08:02,104 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 11:08:55] 2026-01-12 10:08:02,104 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 11:08:55] 2026-01-12 10:08:02,105 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 11:08:55] 2026-01-12 10:08:02,105 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 11:08:55] 2026-01-12 10:08:02,105 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 11:08:55] 2026-01-12 10:08:02,105 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 11:08:55] 2026-01-12 10:08:02,105 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 11:08:55] 2026-01-12 10:08:02,105 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 11:08:55] 2026-01-12 10:08:02,105 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 11:08:55] 2026-01-12 10:08:02,105 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 11:08:55] 2026-01-12 10:08:02,105 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 11:08:55] 2026-01-12 10:08:02,106 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 11:08:55] 2026-01-12 10:08:02,106 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 11:08:55] 2026-01-12 10:08:02,106 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 11:08:55] 2026-01-12 10:08:02,106 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 11:08:55] 2026-01-12 10:08:02,106 | INFO     | job 6963162310 has completed (purged errors)
[2026-01-12 11:08:55] 2026-01-12 10:08:02,106 | INFO     | overall cleanup function is called
[2026-01-12 11:08:55] 2026-01-12 10:08:03,116 | INFO     | --- collectZombieJob: --- 10, [3606]
[2026-01-12 11:08:55] 2026-01-12 10:08:03,116 | INFO     | zombie collector waiting for pid 3606
[2026-01-12 11:08:55] 2026-01-12 10:08:03,116 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 11:08:55] 2026-01-12 10:08:03,116 | INFO     | collected zombie processes
[2026-01-12 11:08:55] 2026-01-12 10:08:03,117 | INFO     | will attempt to kill all subprocesses of pid=3606
[2026-01-12 11:08:55] 2026-01-12 10:08:03,201 | INFO     | process IDs to be killed: [3606] (in reverse order)
[2026-01-12 11:08:55] 2026-01-12 10:08:04,202 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 11:08:55] 2026-01-12 10:08:04,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 11:08:55] 2026-01-12 10:08:04,204 | INFO     | did not find any defunct processes belonging to 3606
[2026-01-12 11:08:55] 2026-01-12 10:08:04,205 | INFO     | did not find any defunct processes belonging to 3606
[2026-01-12 11:08:55] 2026-01-12 10:08:04,206 | INFO     | ready for new job
[2026-01-12 11:08:55] 2026-01-12 10:08:04,206 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 11:08:55] 2026-01-12 10:08:04,207 | INFO     | ***************************************
[2026-01-12 11:08:55] 2026-01-12 10:08:04,207 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 11:08:55] 2026-01-12 10:08:04,207 | INFO     | ***************************************
[2026-01-12 11:08:55] 2026-01-12 10:08:04,208 | INFO     | 
[2026-01-12 11:08:55] 2026-01-12 10:08:04,208 | INFO     | pilot is running in a VM
[2026-01-12 11:08:55] 2026-01-12 10:08:04,208 | INFO     | architecture information:
[2026-01-12 11:08:55] 2026-01-12 10:08:04,222 | INFO     | executing command: cat /etc/os-release
[2026-01-12 11:08:55] 2026-01-12 10:08:04,471 | INFO     | cat /etc/os-release:
[2026-01-12 11:08:55] NAME="CentOS Linux"
[2026-01-12 11:08:55] VERSION="7 (Core)"
[2026-01-12 11:08:55] ID="centos"
[2026-01-12 11:08:55] ID_LIKE="rhel fedora"
[2026-01-12 11:08:55] VERSION_ID="7"
[2026-01-12 11:08:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 11:08:55] ANSI_COLOR="0;31"
[2026-01-12 11:08:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 11:08:55] HOME_URL="https://www.centos.org/"
[2026-01-12 11:08:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 11:08:55] 
[2026-01-12 11:08:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 11:08:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 11:08:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 11:08:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 11:08:55] 
[2026-01-12 11:08:55] 2026-01-12 10:08:04,472 | INFO     | ***************************************
[2026-01-12 11:08:55] 2026-01-12 10:08:04,978 | INFO     | executing command: df -mP /var/lib/boinc/slots/26
[2026-01-12 11:08:55] 2026-01-12 10:08:05,283 | INFO     | sufficient remaining disk space (496977838080 B)
[2026-01-12 11:08:55] 2026-01-12 10:08:05,283 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 11:08:55] 2026-01-12 10:08:05,283 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 11:08:55] 2026-01-12 10:08:05,284 | INFO     | update_server=False
[2026-01-12 11:08:55] 2026-01-12 10:08:05,284 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 11:08:55] 2026-01-12 10:08:05,296 | INFO     | all payload control threads have been joined
[2026-01-12 11:08:55] 2026-01-12 10:08:05,455 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 11:08:55] 2026-01-12 10:08:05,676 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-12 11:08:55] 2026-01-12 10:08:05,676 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-12 11:08:55] 2026-01-12 10:08:05,676 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 11:08:55] 2026-01-12 10:08:05,677 | INFO     | will abort loop
[2026-01-12 11:08:55] 2026-01-12 10:08:05,730 | INFO     | all data control threads have been joined
[2026-01-12 11:08:55] 2026-01-12 10:08:05,910 | INFO     | all job control threads have been joined
[2026-01-12 11:08:55] 2026-01-12 10:08:06,290 | INFO     | [job] retrieve thread has finished
[2026-01-12 11:08:55] 2026-01-12 10:08:06,302 | INFO     | [payload] control thread has finished
[2026-01-12 11:08:55] 2026-01-12 10:08:06,444 | INFO     | [payload] failed_post thread has finished
[2026-01-12 11:08:55] 2026-01-12 10:08:06,557 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 11:08:55] 2026-01-12 10:08:06,602 | INFO     | [job] validate thread has finished
[2026-01-12 11:08:55] 2026-01-12 10:08:06,633 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 11:08:55] 2026-01-12 10:08:06,682 | INFO     | [job] job monitor thread has finished
[2026-01-12 11:08:55] 2026-01-12 10:08:06,736 | INFO     | [data] control thread has finished
[2026-01-12 11:08:55] 2026-01-12 10:08:06,916 | INFO     | [job] control thread has finished
[2026-01-12 11:08:55] 2026-01-12 10:08:06,995 | INFO     | [data] copytool_in thread has finished
[2026-01-12 11:08:55] 2026-01-12 10:08:07,115 | INFO     | [payload] validate_post thread has finished
[2026-01-12 11:08:55] 2026-01-12 10:08:07,353 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 11:08:55] 2026-01-12 10:08:07,389 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 11:08:55] 2026-01-12 10:08:07,462 | INFO     | [data] copytool_out thread has finished
[2026-01-12 11:08:55] 2026-01-12 10:08:07,563 | INFO     | [job] queue monitor thread has finished
[2026-01-12 11:08:55] 2026-01-12 10:08:07,687 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 11:08:55] 2026-01-12 10:08:08,622 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 11:08:55] 2026-01-12 10:08:12,631 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 11:08:55] 2026-01-12 10:08:33,764 | INFO     | PID=29507 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-12 11:08:55] 2026-01-12 10:08:33,764 | INFO     | .. there are 2 such processes running
[2026-01-12 11:08:55] 2026-01-12 10:08:33,765 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 11:08:55] 2026-01-12 10:08:33,765 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 11:08:55] 2026-01-12 10:08:33,765 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 11:08:55] 2026-01-12 10:08:45,227 | INFO     | [monitor] cgroup control has ended
[2026-01-12 11:08:55] 2026-01-12 10:08:46,128 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140205320415040)>', '<ExcThread(monitor, started 140204870444800)>']
[2026-01-12 11:08:55] 2026-01-12 10:08:46,843 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 11:08:55] 2026-01-12 10:08:46,843 | INFO     | [monitor] control thread has ended
[2026-01-12 11:08:55] 2026-01-12 10:08:51,154 | INFO     | all workflow threads have been joined
[2026-01-12 11:08:55] 2026-01-12 10:08:51,154 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 11:08:55] 2026-01-12 10:08:51,154 | INFO     | traces error code: 0
[2026-01-12 11:08:55] 2026-01-12 10:08:51,155 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 11:08:55] 2026-01-12 10:08:51,492 [wrapper] ==== pilot stdout END ====
[2026-01-12 11:08:55] 2026-01-12 10:08:51,539 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 11:08:55] 2026-01-12 10:08:51,645 [wrapper] pilotpid: 29507
[2026-01-12 11:08:55] 2026-01-12 10:08:51,774 [wrapper] Pilot exit status: 0
[2026-01-12 11:08:55] 2026-01-12 10:08:51,933 [wrapper] pandaids: 6963162310
[2026-01-12 11:08:55] 2026-01-12 10:08:52,048 [wrapper] cleanup supervisor_pilot  2775 29508
[2026-01-12 11:08:55] 2026-01-12 10:08:52,157 [wrapper] Test setup, not cleaning
[2026-01-12 11:08:55] 2026-01-12 10:08:52,268 [wrapper] apfmon messages muted
[2026-01-12 11:08:55] 2026-01-12 10:08:52,382 [wrapper] ==== wrapper stdout END ====
[2026-01-12 11:08:55] 2026-01-12 10:08:52,520 [wrapper] ==== wrapper stderr END ====
[2026-01-12 11:08:55]  *** Error codes and diagnostics ***
[2026-01-12 11:08:55]     "exeErrorCode": 0,
[2026-01-12 11:08:55]     "exeErrorDiag": "",
[2026-01-12 11:08:55]     "pilotErrorCode": 0,
[2026-01-12 11:08:55]     "pilotErrorDiag": "",
[2026-01-12 11:08:55]  *** Listing of results directory ***
[2026-01-12 11:08:55] total 447832
[2026-01-12 11:08:55] -rw-r--r--. 1 boinc boinc    579449 Jan  8 22:44 pilot3.tar.gz
[2026-01-12 11:08:55] -rwx------. 1 boinc boinc     36322 Jan  8 22:49 runpilot2-wrapper.sh
[2026-01-12 11:08:55] -rw-r--r--. 1 boinc boinc      5112 Jan  8 22:51 queuedata.json
[2026-01-12 11:08:55] -rw-r--r--. 1 boinc boinc       100 Jan 12 05:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 11:08:55] -rwxr-xr-x. 1 boinc boinc      7986 Jan 12 05:12 run_atlas
[2026-01-12 11:08:55] -rw-r--r--. 1 boinc boinc       105 Jan 12 05:12 job.xml
[2026-01-12 11:08:55] -rw-r--r--. 2 boinc boinc 226772031 Jan 12 05:12 EVNT.47898824._001293.pool.root.1
[2026-01-12 11:08:55] -rw-r--r--. 2 boinc boinc     15847 Jan 12 05:12 start_atlas.sh
[2026-01-12 11:08:55] drwxrwx--x. 2 boinc boinc        68 Jan 12 05:12 shared
[2026-01-12 11:08:55] -rw-r--r--. 2 boinc boinc    592398 Jan 12 05:12 input.tar.gz
[2026-01-12 11:08:55] -rw-r--r--. 1 boinc boinc      6392 Jan 12 05:12 init_data.xml
[2026-01-12 11:08:55] -rw-r--r--. 1 boinc boinc         0 Jan 12 05:12 boinc_lockfile
[2026-01-12 11:08:55] -rw-r--r--. 1 boinc boinc      2519 Jan 12 05:12 pandaJob.out
[2026-01-12 11:08:55] -rw-------. 1 boinc boinc    990050 Jan 12 05:17 agis_schedconf.cvmfs.json
[2026-01-12 11:08:55] drwx------. 5 boinc boinc      4096 Jan 12 05:17 pilot3
[2026-01-12 11:08:55] -rw-------. 1 boinc boinc 221249328 Jan 12 11:04 HITS.47898826._033931.pool.root.1
[2026-01-12 11:08:55] -rw-r--r--. 1 boinc boinc       531 Jan 12 11:05 boinc_task_state.xml
[2026-01-12 11:08:55] -rw-------. 1 boinc boinc      1016 Jan 12 11:05 memory_monitor_summary.json
[2026-01-12 11:08:55] -rw-------. 1 boinc boinc   1516240 Jan 12 11:05 agis_ddmendpoints.agis.ALL.json
[2026-01-12 11:08:55] -rw-------. 1 boinc boinc    537355 Jan 12 11:06 log.47898826._033931.job.log.tgz.1
[2026-01-12 11:08:55] -rw-------. 1 boinc boinc      7777 Jan 12 11:08 heartbeat.json
[2026-01-12 11:08:55] -rw-------. 1 boinc boinc        95 Jan 12 11:08 pilot_heartbeat.json
[2026-01-12 11:08:55] -rw-r--r--. 1 boinc boinc      8192 Jan 12 11:08 boinc_mmap_file
[2026-01-12 11:08:55] -rw-r--r--. 1 boinc boinc        28 Jan 12 11:08 wrapper_checkpoint.txt
[2026-01-12 11:08:55] -rw-------. 1 boinc boinc      5071 Jan 12 11:08 pilotlog.txt
[2026-01-12 11:08:55] -rw-------. 1 boinc boinc   2792930 Jan 12 11:08 log.47898826._033931.job.log.1
[2026-01-12 11:08:55] -rw-------. 1 boinc boinc       357 Jan 12 11:08 output.list
[2026-01-12 11:08:55] -rw-r--r--. 1 boinc boinc       620 Jan 12 11:08 runtime_log
[2026-01-12 11:08:55] -rw-------. 1 boinc boinc   3348480 Jan 12 11:08 result.tar.gz
[2026-01-12 11:08:55] -rw-r--r--. 1 boinc boinc      8833 Jan 12 11:08 runtime_log.err
[2026-01-12 11:08:55] -rw-------. 1 boinc boinc       657 Jan 12 11:08 akkKDmz3Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHflKDmS3Guqm.diag
[2026-01-12 11:08:55] -rw-r--r--. 1 boinc boinc     20782 Jan 12 11:08 stderr.txt
[2026-01-12 11:08:55] HITS file was successfully produced:
[2026-01-12 11:08:55] -rw-------. 1 boinc boinc 221249328 Jan 12 11:04 shared/HITS.pool.root.1
[2026-01-12 11:08:55]  *** Contents of shared directory: ***
[2026-01-12 11:08:55] total 441392
[2026-01-12 11:08:55] -rw-r--r--. 2 boinc boinc 226772031 Jan 12 05:12 ATLAS.root_0
[2026-01-12 11:08:55] -rw-r--r--. 2 boinc boinc     15847 Jan 12 05:12 start_atlas.sh
[2026-01-12 11:08:55] -rw-r--r--. 2 boinc boinc    592398 Jan 12 05:12 input.tar.gz
[2026-01-12 11:08:55] -rw-------. 1 boinc boinc 221249328 Jan 12 11:04 HITS.pool.root.1
[2026-01-12 11:08:55] -rw-------. 1 boinc boinc   3348480 Jan 12 11:08 result.tar.gz
11:08:56 (25777): run_atlas exited; CPU time 77343.591488
11:08:56 (25777): called boinc_finish(0)

</stderr_txt>
]]>

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