Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-12 02:49:15 (14516): vboxwrapper version 26210
2026-01-12 02:49:15 (14516): BOINC client version: 8.2.8
2026-01-12 02:49:16 (14516): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-01-12 02:49:16 (14516): Successfully copied 'init_data.xml' to the shared directory.
2026-01-12 02:49:16 (14516): Create VM. (boinc_9405321bc66c7d81, slot#1)
2026-01-12 02:49:17 (14516): Setting Memory Size for VM. (4300MB)
2026-01-12 02:49:17 (14516): Setting CPU Count for VM. (3)
2026-01-12 02:49:17 (14516): Setting Chipset Options for VM.
2026-01-12 02:49:18 (14516): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-12 02:49:18 (14516): Setting Boot Options for VM.
2026-01-12 02:49:18 (14516): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-12 02:49:19 (14516): Enabling VM Network Access.
2026-01-12 02:49:19 (14516): Disabling USB Support for VM.
2026-01-12 02:49:19 (14516): Disabling COM Port Support for VM.
2026-01-12 02:49:20 (14516): Disabling LPT Port Support for VM.
2026-01-12 02:49:20 (14516): Disabling Audio Support for VM.
2026-01-12 02:49:20 (14516): Disabling Clipboard Support for VM.
2026-01-12 02:49:20 (14516): Disabling Drag and Drop Support for VM.
2026-01-12 02:49:21 (14516): Adding storage controller(s) to VM.
2026-01-12 02:49:21 (14516): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-12 02:49:21 (14516): Adding VirtualBox Guest Additions to VM.
2026-01-12 02:49:22 (14516): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-12 02:49:22 (14516): forwarding host port 56997 to guest port 80
2026-01-12 02:49:22 (14516): Enabling remote desktop for VM.
2026-01-12 02:49:23 (14516): Enabling shared directory for VM.
2026-01-12 02:49:24 (14516): Starting VM using VBoxManage interface. (boinc_9405321bc66c7d81, slot#1)
2026-01-12 02:49:29 (14516): Successfully started VM. (PID = '15776')
2026-01-12 02:49:29 (14516): Reporting VM Process ID to BOINC.
2026-01-12 02:49:29 (14516): Guest Log: BIOS: VirtualBox 7.2.4
2026-01-12 02:49:29 (14516): Guest Log: CPUID EDX: 0x178bfbff
2026-01-12 02:49:29 (14516): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-12 02:49:29 (14516): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-12 02:49:29 (14516): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-12 02:49:29 (14516): Detected: Web Application Enabled (http://localhost:56997)
2026-01-12 02:49:29 (14516): Detected: Remote Desktop Enabled (localhost:56999)
2026-01-12 02:49:29 (14516): Preference change detected
2026-01-12 02:49:29 (14516): Setting CPU throttle for VM. (100%)
2026-01-12 02:49:29 (14516): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-12 02:49:31 (14516): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-12 02:49:31 (14516): Guest Log: BIOS: Booting from Hard Disk...
2026-01-12 02:49:34 (14516): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-12 02:49:34 (14516): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-12 02:49:34 (14516): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-12 02:49:40 (14516): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-12 02:49:40 (14516): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-12 02:49:44 (14516): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-12 02:49:44 (14516): Guest Log: 00:00:00.000089 main     Log opened 2026-01-12T02:49:41.917554000Z
2026-01-12 02:49:44 (14516): Guest Log: 00:00:00.000150 main     OS Product: Linux
2026-01-12 02:49:44 (14516): Guest Log: 00:00:00.000172 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-12 02:49:44 (14516): Guest Log: 00:00:00.000190 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-12 02:49:44 (14516): Guest Log: 00:00:00.000208 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-12 02:49:44 (14516): Guest Log: 00:00:00.000209 main     Process ID: 1287
2026-01-12 02:49:44 (14516): Guest Log: 00:00:00.000209 main     Package type: LINUX_64BITS_GENERIC
2026-01-12 02:49:44 (14516): Guest Log: 00:00:00.000722 main     5.2.32 r132073 started. Verbose level = 0
2026-01-12 02:49:44 (14516): Guest Log: 00:00:00.005097 automount vbsvcAutoMountWorker: Shared folder 'scambio' was mounted to '/media/sf_scambio'
2026-01-12 02:49:44 (14516): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-12 02:49:44 (14516): Guest Log: [INFO] Mounting shared directory
2026-01-12 02:49:44 (14516): Guest Log: [INFO] Checking for init_data.xml
2026-01-12 02:49:54 (14516): Guest Log: 00:00:10.130975 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 430 321 000ns (GuestNow=1 768 182 593 488 549 000 ns GuestLast=1 768 186 181 918 870 000 ns fSetTimeLastLoop=true )
2026-01-12 02:50:36 (14516): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-12 02:50:36 (14516): Guest Log: [INFO] Detected branch: prod
2026-01-12 02:50:36 (14516): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-12 02:50:36 (14516): Guest Log: Copying input files
2026-01-12 02:50:36 (14516): Guest Log: Copied input files into RunAtlas.
2026-01-12 02:50:37 (14516): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-12 02:50:37 (14516): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-12 02:50:37 (14516): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-12 02:50:37 (14516): Guest Log: Further information can be found at the LHC@home message board.
2026-01-12 02:50:44 (14516): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-12 02:50:44 (14516): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-12 02:50:44 (14516): Guest Log: 2.6.3.0 1588 0 30128 155035 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-12 02:50:45 (14516): Guest Log: copied the webapp to /var/www
2026-01-12 02:50:45 (14516): Guest Log: ATHENA_PROC_NUMBER=3
2026-01-12 02:50:45 (14516): Guest Log: ATHENA_CORE_NUMBER=3
2026-01-12 02:50:46 (14516): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-12 02:50:46 (14516): Guest Log:  *** Starting ATLAS job. (PandaID=6963162167 taskID=47898826) ***
2026-01-12 04:29:36 (14516): Status Report: Elapsed Time: '6000.000000'
2026-01-12 04:29:36 (14516): Status Report: CPU Time: '16045.484375'
2026-01-12 05:17:47 (14516): Guest Log:  *** Job finished ***
2026-01-12 05:17:47 (14516): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-12 05:17:47 (14516): Guest Log: 2026-01-12 04:17:43,830 | INFO     | PID=5985 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-12 05:17:47 (14516): Guest Log: 2026-01-12 04:17:43,830 | INFO     | found 0 job(s) in 20 queues
2026-01-12 05:17:47 (14516): Guest Log: 2026-01-12 04:17:43,830 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-12 05:17:47 (14516): Guest Log: 2026-01-12 04:17:43,830 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-12 05:17:47 (14516): Guest Log: 2026-01-12 04:17:43,830 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-12 05:17:47 (14516): Guest Log: 2026-01-12 04:17:43,830 | INFO     | [monitor] control thread has ended
2026-01-12 05:17:47 (14516): Guest Log: 2026-01-12 04:17:46,409 | INFO     | all workflow threads have been joined
2026-01-12 05:17:47 (14516): Guest Log: 2026-01-12 04:17:46,409 | INFO     | end of generic workflow (traces error code: 0)
2026-01-12 05:17:47 (14516): Guest Log: 2026-01-12 04:17:46,409 | INFO     | traces error code: 0
2026-01-12 05:17:47 (14516): Guest Log: 2026-01-12 04:17:46,409 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-12 05:17:47 (14516): Guest Log: 2026-01-12 04:17:46,460 [wrapper] ==== pilot stdout END ====
2026-01-12 05:17:47 (14516): Guest Log: 2026-01-12 04:17:46,462 [wrapper] ==== wrapper stdout RESUME ====
2026-01-12 05:17:47 (14516): Guest Log: 2026-01-12 04:17:46,465 [wrapper] pilotpid: 5985
2026-01-12 05:17:47 (14516): Guest Log: 2026-01-12 04:17:46,468 [wrapper] Pilot exit status: 0
2026-01-12 05:17:47 (14516): Guest Log: 2026-01-12 04:17:46,540 [wrapper] pandaids: 6963162167
2026-01-12 05:17:47 (14516): Guest Log: 2026-01-12 04:17:46,566 [wrapper] cleanup supervisor_pilot  7077 5986
2026-01-12 05:17:47 (14516): Guest Log: 2026-01-12 04:17:46,568 [wrapper] Test setup, not cleaning
2026-01-12 05:17:47 (14516): Guest Log: 2026-01-12 04:17:46,571 [wrapper] apfmon messages muted
2026-01-12 05:17:48 (14516): Guest Log: 2026-01-12 04:17:46,573 [wrapper] ==== wrapper stdout END ====
2026-01-12 05:17:48 (14516): Guest Log: 2026-01-12 04:17:46,576 [wrapper] ==== wrapper stderr END ====
2026-01-12 05:17:48 (14516): Guest Log:  *** Error codes and diagnostics ***
2026-01-12 05:17:48 (14516): Guest Log:     "exeErrorCode": 0,
2026-01-12 05:17:48 (14516): Guest Log:     "exeErrorDiag": "",
2026-01-12 05:17:48 (14516): Guest Log:     "pilotErrorCode": 0,
2026-01-12 05:17:48 (14516): Guest Log:     "pilotErrorDiag": "",
2026-01-12 05:17:48 (14516): Guest Log:  *** Listing of results directory ***
2026-01-12 05:17:48 (14516): Guest Log: total 223412
2026-01-12 05:17:48 (14516): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  8 21:44 pilot3.tar.gz
2026-01-12 05:17:48 (14516): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  8 21:49 runpilot2-wrapper.sh
2026-01-12 05:17:48 (14516): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  8 21:51 queuedata.json
2026-01-12 05:17:48 (14516): Guest Log: -rwxr-xr-x. 1 atlas atlas      8668 Jan 12 01:50 init_data.xml
2026-01-12 05:17:48 (14516): Guest Log: -rwxr-xr-x. 1 atlas atlas    592396 Jan 12 01:50 input.tar.gz
2026-01-12 05:17:48 (14516): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan 12 01:50 start_atlas.sh
2026-01-12 05:17:48 (14516): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 12 01:50 EVNT.47898824._001240.pool.root.1 -> /data/./ATLAS.root_0
2026-01-12 05:17:48 (14516): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Jan 12 01:50 pandaJob.out
2026-01-12 05:17:48 (14516): Guest Log: -rw-------. 1 atlas atlas    990074 Jan 12 01:53 agis_schedconf.cvmfs.json
2026-01-12 05:17:48 (14516): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan 12 01:53 agis_ddmendpoints.agis.ALL.json
2026-01-12 05:17:48 (14516): Guest Log: drwx------. 5 atlas atlas      4096 Jan 12 01:53 pilot3
2026-01-12 05:17:48 (14516): Guest Log: -rw-------. 1 atlas atlas 221917122 Jan 12 04:16 HITS.47898826._033794.pool.root.1
2026-01-12 05:17:48 (14516): Guest Log: -rw-------. 1 atlas atlas        95 Jan 12 04:16 pilot_heartbeat.json
2026-01-12 05:17:48 (14516): Guest Log: -rw-------. 1 atlas atlas      1027 Jan 12 04:16 memory_monitor_summary.json
2026-01-12 05:17:48 (14516): Guest Log: -rw-------. 1 atlas atlas    313248 Jan 12 04:16 log.47898826._033794.job.log.tgz.1
2026-01-12 05:17:48 (14516): Guest Log: -rw-------. 1 atlas atlas      7811 Jan 12 04:17 heartbeat.json
2026-01-12 05:17:48 (14516): Guest Log: -rw-------. 1 atlas atlas      4877 Jan 12 04:17 pilotlog.txt
2026-01-12 05:17:48 (14516): Guest Log: -rw-------. 1 atlas atlas   1194446 Jan 12 04:17 log.47898826._033794.job.log.1
2026-01-12 05:17:48 (14516): Guest Log: -rw-------. 1 atlas atlas       357 Jan 12 04:17 output.list
2026-01-12 05:17:48 (14516): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 12 04:17 runtime_log
2026-01-12 05:17:48 (14516): Guest Log: -rw-------. 1 atlas atlas   1525760 Jan 12 04:17 result.tar.gz
2026-01-12 05:17:48 (14516): Guest Log: -rw-r--r--. 1 atlas atlas      8761 Jan 12 04:17 runtime_log.err
2026-01-12 05:17:48 (14516): Guest Log: -rw-------. 1 atlas atlas       657 Jan 12 04:17 If9NDml3Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmelKDmMPwcLo.diag
2026-01-12 05:17:48 (14516): Guest Log: Looking for outputfile HITS.47898826._033794.pool.root.1
2026-01-12 05:17:48 (14516): Guest Log: HITS file was successfully produced
2026-01-12 05:17:48 (14516): Guest Log: -rw-------. 1 atlas atlas 221917122 Jan 12 04:16 /home/atlas/RunAtlas/HITS.47898826._033794.pool.root.1
2026-01-12 05:17:48 (14516): Guest Log: Successfully finished the ATLAS job!
2026-01-12 05:17:48 (14516): Guest Log: Copying the results back to the shared directory!
2026-01-12 05:17:48 (14516): Guest Log:  *** Contents of shared directory: ***
2026-01-12 05:17:48 (14516): Guest Log: total 438740
2026-01-12 05:17:48 (14516): Guest Log: -rwxrwxrwx. 1 root root 225200606 Jan 12 01:49 ATLAS.root_0
2026-01-12 05:17:48 (14516): Guest Log: -rwxrwxrwx. 1 root root 221917122 Jan 12 04:17 HITS.pool.root.1
2026-01-12 05:17:48 (14516): Guest Log: -rwxrwxrwx. 1 root root      8668 Jan 12 01:49 init_data.xml
2026-01-12 05:17:48 (14516): Guest Log: -rwxrwxrwx. 1 root root    592396 Jan 11 22:08 input.tar.gz
2026-01-12 05:17:48 (14516): Guest Log: -rwxrwxrwx. 1 root root   1525760 Jan 12 04:17 result.tar.gz
2026-01-12 05:17:48 (14516): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan 11 22:08 start_atlas.sh
2026-01-12 05:17:48 (14516): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-12 05:17:48 (14516): VM Completion File Detected.
2026-01-12 05:17:48 (14516): Powering off VM.
2026-01-12 05:17:48 (14516): Successfully stopped VM.
2026-01-12 05:17:48 (14516): Deregistering VM. (boinc_9405321bc66c7d81, slot#1)
2026-01-12 05:17:48 (14516): Removing network bandwidth throttle group from VM.
2026-01-12 05:17:48 (14516): Removing VM from VirtualBox.
2026-01-12 05:17:54 (14516): called boinc_finish(0)

</stderr_txt>
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