Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-12 05:04:19 (8320): vboxwrapper version 26210
2026-01-12 05:04:19 (8320): BOINC client version: 8.2.8
2026-01-12 05:04:20 (8320): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-01-12 05:04:20 (8320): Successfully copied 'init_data.xml' to the shared directory.
2026-01-12 05:04:20 (8320): Create VM. (boinc_c300a381d914fde4, slot#4)
2026-01-12 05:04:21 (8320): Setting Memory Size for VM. (4300MB)
2026-01-12 05:04:21 (8320): Setting CPU Count for VM. (3)
2026-01-12 05:04:21 (8320): Setting Chipset Options for VM.
2026-01-12 05:04:22 (8320): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-12 05:04:22 (8320): Setting Boot Options for VM.
2026-01-12 05:04:22 (8320): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-12 05:04:23 (8320): Enabling VM Network Access.
2026-01-12 05:04:23 (8320): Disabling USB Support for VM.
2026-01-12 05:04:23 (8320): Disabling COM Port Support for VM.
2026-01-12 05:04:23 (8320): Disabling LPT Port Support for VM.
2026-01-12 05:04:24 (8320): Disabling Audio Support for VM.
2026-01-12 05:04:24 (8320): Disabling Clipboard Support for VM.
2026-01-12 05:04:24 (8320): Disabling Drag and Drop Support for VM.
2026-01-12 05:04:25 (8320): Adding storage controller(s) to VM.
2026-01-12 05:04:25 (8320): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-12 05:04:25 (8320): Adding VirtualBox Guest Additions to VM.
2026-01-12 05:04:26 (8320): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-12 05:04:26 (8320): forwarding host port 58456 to guest port 80
2026-01-12 05:04:26 (8320): Enabling remote desktop for VM.
2026-01-12 05:04:27 (8320): Enabling shared directory for VM.
2026-01-12 05:04:28 (8320): Starting VM using VBoxManage interface. (boinc_c300a381d914fde4, slot#4)
2026-01-12 05:04:33 (8320): Successfully started VM. (PID = '18636')
2026-01-12 05:04:33 (8320): Reporting VM Process ID to BOINC.
2026-01-12 05:04:33 (8320): Guest Log: BIOS: VirtualBox 7.2.4
2026-01-12 05:04:33 (8320): Guest Log: CPUID EDX: 0x178bfbff
2026-01-12 05:04:33 (8320): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-12 05:04:33 (8320): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-12 05:04:33 (8320): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-12 05:04:33 (8320): Detected: Web Application Enabled (http://localhost:58456)
2026-01-12 05:04:33 (8320): Detected: Remote Desktop Enabled (localhost:58458)
2026-01-12 05:04:33 (8320): Preference change detected
2026-01-12 05:04:33 (8320): Setting CPU throttle for VM. (100%)
2026-01-12 05:04:33 (8320): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-12 05:04:35 (8320): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-12 05:04:35 (8320): Guest Log: BIOS: Booting from Hard Disk...
2026-01-12 05:04:37 (8320): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-12 05:04:37 (8320): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-12 05:04:37 (8320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-12 05:04:40 (8320): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-12 05:04:40 (8320): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-12 05:04:44 (8320): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-12 05:04:44 (8320): Guest Log: 00:00:00.000083 main     Log opened 2026-01-12T05:04:42.555626000Z
2026-01-12 05:04:44 (8320): Guest Log: 00:00:00.000155 main     OS Product: Linux
2026-01-12 05:04:44 (8320): Guest Log: 00:00:00.000178 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-12 05:04:44 (8320): Guest Log: 00:00:00.000214 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-12 05:04:44 (8320): Guest Log: 00:00:00.000239 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-12 05:04:44 (8320): Guest Log: 00:00:00.000240 main     Process ID: 1287
2026-01-12 05:04:44 (8320): Guest Log: 00:00:00.000240 main     Package type: LINUX_64BITS_GENERIC
2026-01-12 05:04:44 (8320): Guest Log: 00:00:00.001615 main     5.2.32 r132073 started. Verbose level = 0
2026-01-12 05:04:44 (8320): Guest Log: 00:00:00.006461 automount vbsvcAutoMountWorker: Shared folder 'scambio' was mounted to '/media/sf_scambio'
2026-01-12 05:04:44 (8320): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-12 05:04:44 (8320): Guest Log: [INFO] Mounting shared directory
2026-01-12 05:04:44 (8320): Guest Log: [INFO] Checking for init_data.xml
2026-01-12 05:04:54 (8320): Guest Log: 00:00:10.004151 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 493 506 000ns (GuestNow=1 768 190 694 065 069 000 ns GuestLast=1 768 194 282 558 575 000 ns fSetTimeLastLoop=true )
2026-01-12 05:05:31 (8320): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-12 05:05:31 (8320): Guest Log: [INFO] Detected branch: prod
2026-01-12 05:05:31 (8320): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-12 05:05:31 (8320): Guest Log: Copying input files
2026-01-12 05:05:32 (8320): Guest Log: Copied input files into RunAtlas.
2026-01-12 05:05:32 (8320): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-12 05:05:32 (8320): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-12 05:05:32 (8320): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-12 05:05:32 (8320): Guest Log: Further information can be found at the LHC@home message board.
2026-01-12 05:05:42 (8320): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-12 05:05:43 (8320): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-12 05:05:43 (8320): Guest Log: 2.6.3.0 1584 0 32032 155038 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-12 05:05:43 (8320): Guest Log: copied the webapp to /var/www
2026-01-12 05:05:43 (8320): Guest Log: ATHENA_PROC_NUMBER=3
2026-01-12 05:05:43 (8320): Guest Log: ATHENA_CORE_NUMBER=3
2026-01-12 05:05:43 (8320): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-12 05:05:43 (8320): Guest Log:  *** Starting ATLAS job. (PandaID=6963147361 taskID=47898826) ***
2026-01-12 06:44:35 (8320): Status Report: Elapsed Time: '6000.000000'
2026-01-12 06:44:35 (8320): Status Report: CPU Time: '16343.484375'
2026-01-12 07:32:14 (8320): Guest Log:  *** Job finished ***
2026-01-12 07:32:14 (8320): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-12 07:32:14 (8320): Guest Log: 2026-01-12 06:31:58,445 | INFO     | all workflow threads have been joined
2026-01-12 07:32:14 (8320): Guest Log: 2026-01-12 06:31:58,445 | INFO     | end of generic workflow (traces error code: 0)
2026-01-12 07:32:14 (8320): Guest Log: 2026-01-12 06:31:58,445 | INFO     | traces error code: 0
2026-01-12 07:32:14 (8320): Guest Log: 2026-01-12 06:31:58,446 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-12 07:32:14 (8320): Guest Log: 2026-01-12 06:32:11,811 | INFO     | PID=5964 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-12 07:32:14 (8320): Guest Log: 2026-01-12 06:32:11,811 | INFO     | found 0 job(s) in 20 queues
2026-01-12 07:32:14 (8320): Guest Log: 2026-01-12 06:32:11,812 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-12 07:32:14 (8320): Guest Log: 2026-01-12 06:32:11,812 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-12 07:32:14 (8320): Guest Log: 2026-01-12 06:32:11,812 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-12 07:32:14 (8320): Guest Log: 2026-01-12 06:32:11,812 | INFO     | [monitor] control thread has ended
2026-01-12 07:32:14 (8320): Guest Log: 2026-01-12 06:32:11,863 [wrapper] ==== pilot stdout END ====
2026-01-12 07:32:14 (8320): Guest Log: 2026-01-12 06:32:11,866 [wrapper] ==== wrapper stdout RESUME ====
2026-01-12 07:32:14 (8320): Guest Log: 2026-01-12 06:32:11,868 [wrapper] pilotpid: 5964
2026-01-12 07:32:14 (8320): Guest Log: 2026-01-12 06:32:11,870 [wrapper] Pilot exit status: 0
2026-01-12 07:32:14 (8320): Guest Log: 2026-01-12 06:32:12,606 [wrapper] pandaids: 6963147361
2026-01-12 07:32:14 (8320): Guest Log: 2026-01-12 06:32:12,632 [wrapper] cleanup supervisor_pilot  7075 5965
2026-01-12 07:32:14 (8320): Guest Log: 2026-01-12 06:32:12,635 [wrapper] Test setup, not cleaning
2026-01-12 07:32:14 (8320): Guest Log: 2026-01-12 06:32:12,639 [wrapper] apfmon messages muted
2026-01-12 07:32:14 (8320): Guest Log: 2026-01-12 06:32:12,641 [wrapper] ==== wrapper stdout END ====
2026-01-12 07:32:14 (8320): Guest Log: 2026-01-12 06:32:12,643 [wrapper] ==== wrapper stderr END ====
2026-01-12 07:32:14 (8320): Guest Log:  *** Error codes and diagnostics ***
2026-01-12 07:32:14 (8320): Guest Log:     "exeErrorCode": 0,
2026-01-12 07:32:14 (8320): Guest Log:     "exeErrorDiag": "",
2026-01-12 07:32:14 (8320): Guest Log:     "pilotErrorCode": 0,
2026-01-12 07:32:14 (8320): Guest Log:     "pilotErrorDiag": "",
2026-01-12 07:32:14 (8320): Guest Log:  *** Listing of results directory ***
2026-01-12 07:32:14 (8320): Guest Log: total 227108
2026-01-12 07:32:14 (8320): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  8 15:02 pilot3.tar.gz
2026-01-12 07:32:14 (8320): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  8 15:06 runpilot2-wrapper.sh
2026-01-12 07:32:14 (8320): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  8 15:07 queuedata.json
2026-01-12 07:32:14 (8320): Guest Log: -rwxr-xr-x. 1 atlas atlas      8668 Jan 12 04:05 init_data.xml
2026-01-12 07:32:14 (8320): Guest Log: -rwxr-xr-x. 1 atlas atlas    592396 Jan 12 04:05 input.tar.gz
2026-01-12 07:32:14 (8320): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan 12 04:05 start_atlas.sh
2026-01-12 07:32:14 (8320): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 12 04:05 EVNT.47898824._001099.pool.root.1 -> /data/./ATLAS.root_0
2026-01-12 07:32:14 (8320): Guest Log: -rw-r--r--. 1 atlas atlas      2519 Jan 12 04:05 pandaJob.out
2026-01-12 07:32:14 (8320): Guest Log: -rw-------. 1 atlas atlas    990058 Jan 12 04:07 agis_schedconf.cvmfs.json
2026-01-12 07:32:14 (8320): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan 12 04:07 agis_ddmendpoints.agis.ALL.json
2026-01-12 07:32:14 (8320): Guest Log: drwx------. 5 atlas atlas      4096 Jan 12 04:07 pilot3
2026-01-12 07:32:14 (8320): Guest Log: -rw-------. 1 atlas atlas 225741004 Jan 12 06:31 HITS.47898826._027556.pool.root.1
2026-01-12 07:32:14 (8320): Guest Log: -rw-------. 1 atlas atlas        95 Jan 12 06:31 pilot_heartbeat.json
2026-01-12 07:32:14 (8320): Guest Log: -rw-------. 1 atlas atlas      1027 Jan 12 06:31 memory_monitor_summary.json
2026-01-12 07:32:14 (8320): Guest Log: -rw-------. 1 atlas atlas    297418 Jan 12 06:31 log.47898826._027556.job.log.tgz.1
2026-01-12 07:32:14 (8320): Guest Log: -rw-------. 1 atlas atlas      7809 Jan 12 06:31 heartbeat.json
2026-01-12 07:32:14 (8320): Guest Log: -rw-------. 1 atlas atlas       744 Jan 12 06:32 pilotlog.txt
2026-01-12 07:32:14 (8320): Guest Log: -rw-------. 1 atlas atlas   1193945 Jan 12 06:32 log.47898826._027556.job.log.1
2026-01-12 07:32:14 (8320): Guest Log: -rw-------. 1 atlas atlas       357 Jan 12 06:32 output.list
2026-01-12 07:32:14 (8320): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 12 06:32 runtime_log
2026-01-12 07:32:14 (8320): Guest Log: -rw-------. 1 atlas atlas   1505280 Jan 12 06:32 result.tar.gz
2026-01-12 07:32:14 (8320): Guest Log: -rw-------. 1 atlas atlas       657 Jan 12 06:32 uTFNDmDm6x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmypkKDmB1OSPo.diag
2026-01-12 07:32:14 (8320): Guest Log: -rw-r--r--. 1 atlas atlas      8761 Jan 12 06:32 runtime_log.err
2026-01-12 07:32:14 (8320): Guest Log: Looking for outputfile HITS.47898826._027556.pool.root.1
2026-01-12 07:32:14 (8320): Guest Log: HITS file was successfully produced
2026-01-12 07:32:14 (8320): Guest Log: -rw-------. 1 atlas atlas 225741004 Jan 12 06:31 /home/atlas/RunAtlas/HITS.47898826._027556.pool.root.1
2026-01-12 07:32:15 (8320): Guest Log: Successfully finished the ATLAS job!
2026-01-12 07:32:15 (8320): Guest Log: Copying the results back to the shared directory!
2026-01-12 07:32:15 (8320): Guest Log:  *** Contents of shared directory: ***
2026-01-12 07:32:15 (8320): Guest Log: total 438432
2026-01-12 07:32:15 (8320): Guest Log: -rwxrwxrwx. 1 root root 221080696 Jan 12 04:04 ATLAS.root_0
2026-01-12 07:32:15 (8320): Guest Log: -rwxrwxrwx. 1 root root 225741004 Jan 12 06:32 HITS.pool.root.1
2026-01-12 07:32:15 (8320): Guest Log: -rwxrwxrwx. 1 root root      8668 Jan 12 04:04 init_data.xml
2026-01-12 07:32:15 (8320): Guest Log: -rwxrwxrwx. 1 root root    592396 Jan 11 22:08 input.tar.gz
2026-01-12 07:32:15 (8320): Guest Log: -rwxrwxrwx. 1 root root   1505280 Jan 12 06:32 result.tar.gz
2026-01-12 07:32:15 (8320): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan 11 22:08 start_atlas.sh
2026-01-12 07:32:15 (8320): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-12 07:32:15 (8320): VM Completion File Detected.
2026-01-12 07:32:15 (8320): Powering off VM.
2026-01-12 07:32:15 (8320): Successfully stopped VM.
2026-01-12 07:32:15 (8320): Deregistering VM. (boinc_c300a381d914fde4, slot#4)
2026-01-12 07:32:15 (8320): Removing network bandwidth throttle group from VM.
2026-01-12 07:32:16 (8320): Removing VM from VirtualBox.
2026-01-12 07:32:21 (8320): called boinc_finish(0)

</stderr_txt>
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