Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:40:51 (2107559): wrapper (7.7.26015): starting
15:40:51 (2107559): wrapper: running run_atlas (--nthreads 8)
[2026-01-11 15:40:51] Arguments: --nthreads 8
[2026-01-11 15:40:51] Threads: 8
[2026-01-11 15:40:51] Checking for CVMFS
[2026-01-11 15:40:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 15:40:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 15:40:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 15:40:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 15:40:53] 2.13.3.0 11250 96782 357660 155028 1 698 28405718 32935937 17567 16776704 0 284923470 99.480 391640322 40025 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-11 15:40:53] CVMFS is ok
[2026-01-11 15:40:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 15:40:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 15:40:53] Further information can be found at the LHC@home message board.
[2026-01-11 15:40:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 15:40:53] Checking for apptainer binary...
[2026-01-11 15:40:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 15:40:53] Running /usr/bin/apptainer --version
[2026-01-11 15:40:53] apptainer version 1.4.5-2.el9
[2026-01-11 15:40:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 15:40:54] c6-2-29-1.aglt2.org
[2026-01-11 15:40:54] apptainer works
[2026-01-11 15:40:54] Set ATHENA_PROC_NUMBER=8
[2026-01-11 15:40:54] Set ATHENA_CORE_NUMBER=8
[2026-01-11 15:40:55] Starting ATLAS job with PandaID=6963155704
[2026-01-11 15:40:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 22:27:20]  *** The last 200 lines of the pilot log: ***
[2026-01-11 22:27:20] 2026-01-12 03:26:46,392 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3016.305803571428
[2026-01-11 22:27:20] 2026-01-12 03:26:46,402 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963155704/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 22:27:20] 2026-01-12 03:26:46,403 | INFO     | extracted standard info from prmon json
[2026-01-11 22:27:20] 2026-01-12 03:26:46,403 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 22:27:20] 2026-01-12 03:26:46,403 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 22:27:20] 2026-01-12 03:26:46,404 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 22:27:20] 2026-01-12 03:26:46,404 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 22:27:20] 2026-01-12 03:26:46,410 | INFO     | fitting pss+swap vs Time
[2026-01-11 22:27:20] 2026-01-12 03:26:46,411 | INFO     | sum of square deviations: 19108908585.23038
[2026-01-11 22:27:20] 2026-01-12 03:26:46,414 | INFO     | sum of deviations: 158462803079.6354
[2026-01-11 22:27:20] 2026-01-12 03:26:46,414 | INFO     | mean x: 1768176327.4379747
[2026-01-11 22:27:20] 2026-01-12 03:26:46,415 | INFO     | mean y: 2515658.9443037976
[2026-01-11 22:27:20] 2026-01-12 03:26:46,415 | INFO     | intersect: -14660288128.889019
[2026-01-11 22:27:20] 2026-01-12 03:26:46,415 | INFO     | chi2: 3.261302628832774
[2026-01-11 22:27:20] 2026-01-12 03:26:46,416 | INFO     | sum of square deviations: 18392399076.75895
[2026-01-11 22:27:20] 2026-01-12 03:26:46,419 | INFO     | sum of deviations: 154637258019.56934
[2026-01-11 22:27:20] 2026-01-12 03:26:46,419 | INFO     | mean x: 1768176174.9435897
[2026-01-11 22:27:20] 2026-01-12 03:26:46,419 | INFO     | mean y: 2514846.707692308
[2026-01-11 22:27:20] 2026-01-12 03:26:46,419 | INFO     | intersect: -14863730402.087187
[2026-01-11 22:27:20] 2026-01-12 03:26:46,420 | INFO     | chi2: 3.2617791240423206
[2026-01-11 22:27:20] 2026-01-12 03:26:46,420 | INFO     | current chi2=3.2617791240423206 (change=-0.014610579384261618 %)
[2026-01-11 22:27:20] 2026-01-12 03:26:46,420 | INFO     | right removable region: 389
[2026-01-11 22:27:20] 2026-01-12 03:26:46,420 | INFO     | sum of square deviations: 18392293546.758938
[2026-01-11 22:27:20] 2026-01-12 03:26:46,424 | INFO     | sum of deviations: 45585385971.86668
[2026-01-11 22:27:20] 2026-01-12 03:26:46,424 | INFO     | mean x: 1768176479.9435897
[2026-01-11 22:27:20] 2026-01-12 03:26:46,424 | INFO     | mean y: 2539645.2666666666
[2026-01-11 22:27:20] 2026-01-12 03:26:46,424 | INFO     | intersect: -4379894068.053925
[2026-01-11 22:27:20] 2026-01-12 03:26:46,425 | INFO     | chi2: 0.2771603390186579
[2026-01-11 22:27:20] 2026-01-12 03:26:46,425 | INFO     | current chi2=0.2771603390186579 (change=91.50154491741068 %)
[2026-01-11 22:27:20] 2026-01-12 03:26:46,425 | INFO     | sum of square deviations: 17693890118.934998
[2026-01-11 22:27:20] 2026-01-12 03:26:46,429 | INFO     | sum of deviations: 18781331924.62339
[2026-01-11 22:27:20] 2026-01-12 03:26:46,429 | INFO     | mean x: 1768176632.4415584
[2026-01-11 22:27:20] 2026-01-12 03:26:46,429 | INFO     | mean y: 2545474.761038961
[2026-01-11 22:27:20] 2026-01-12 03:26:46,429 | INFO     | intersect: -1874300827.0993776
[2026-01-11 22:27:20] 2026-01-12 03:26:46,430 | INFO     | chi2: 0.07487877844463603
[2026-01-11 22:27:20] 2026-01-12 03:26:46,430 | INFO     | current chi2=0.07487877844463603 (change=72.98358823280435 %)
[2026-01-11 22:27:20] 2026-01-12 03:26:46,431 | INFO     | sum of square deviations: 17013346789.839432
[2026-01-11 22:27:20] 2026-01-12 03:26:46,434 | INFO     | sum of deviations: 21077362163.013176
[2026-01-11 22:27:20] 2026-01-12 03:26:46,435 | INFO     | mean x: 1768176784.944737
[2026-01-11 22:27:20] 2026-01-12 03:26:46,435 | INFO     | mean y: 2544952.3815789474
[2026-01-11 22:27:20] 2026-01-12 03:26:46,435 | INFO     | intersect: -2188000089.983023
[2026-01-11 22:27:20] 2026-01-12 03:26:46,435 | INFO     | chi2: 0.06361462322701528
[2026-01-11 22:27:20] 2026-01-12 03:26:46,436 | INFO     | current chi2=0.06361462322701528 (change=15.043187738364693 %)
[2026-01-11 22:27:20] 2026-01-12 03:26:46,436 | INFO     | left removable region: 30
[2026-01-11 22:27:20] 2026-01-12 03:26:46,436 | INFO     | sum of square deviations: 14345665868.339771
[2026-01-11 22:27:20] 2026-01-12 03:26:46,439 | INFO     | sum of deviations: 39727218012.34541
[2026-01-11 22:27:20] 2026-01-12 03:26:46,440 | INFO     | mean x: 1768177059.437326
[2026-01-11 22:27:20] 2026-01-12 03:26:46,440 | INFO     | mean y: 2539365.5264623957
[2026-01-11 22:27:20] 2026-01-12 03:26:46,440 | INFO     | intersect: -4894044464.696535
[2026-01-11 22:27:20] 2026-01-12 03:26:46,440 | INFO     | chi2: 0.006622421309790253
[2026-01-11 22:27:20] 2026-01-12 03:26:46,441 | INFO     | current memory leak: 2.77 B/s (using 359 data points, chi2=0.01)
[2026-01-11 22:27:20] 2026-01-12 03:26:46,441 | INFO     | could have reported an average CPU frequency of 2992 MHz (17 samples)
[2026-01-11 22:27:20] 2026-01-12 03:26:46,442 | INFO     | ..............................
[2026-01-11 22:27:20] 2026-01-12 03:26:46,442 | INFO     | . Timing measurements:
[2026-01-11 22:27:20] 2026-01-12 03:26:46,442 | INFO     | . get job = 0 s
[2026-01-11 22:27:20] 2026-01-12 03:26:46,442 | INFO     | . initial setup = 8 s
[2026-01-11 22:27:20] 2026-01-12 03:26:46,442 | INFO     | . payload setup = 49 s
[2026-01-11 22:27:20] 2026-01-12 03:26:46,442 | INFO     | . stage-in = 0 s
[2026-01-11 22:27:20] 2026-01-12 03:26:46,442 | INFO     | . payload execution = 24106 s
[2026-01-11 22:27:20] 2026-01-12 03:26:46,442 | INFO     | . stage-out = 3 s
[2026-01-11 22:27:20] 2026-01-12 03:26:46,442 | INFO     | . log creation = 0 s
[2026-01-11 22:27:20] 2026-01-12 03:26:46,443 | INFO     | ..............................
[2026-01-11 22:27:20] 2026-01-12 03:26:46,541 | INFO     | 
[2026-01-11 22:27:20] 2026-01-12 03:26:46,541 | INFO     | job summary report
[2026-01-11 22:27:20] 2026-01-12 03:26:46,541 | INFO     | --------------------------------------------------
[2026-01-11 22:27:20] 2026-01-12 03:26:46,541 | INFO     | PanDA job id: 6963155704
[2026-01-11 22:27:20] 2026-01-12 03:26:46,541 | INFO     | task id: 47898826
[2026-01-11 22:27:20] 2026-01-12 03:26:46,541 | INFO     | errors: (none)
[2026-01-11 22:27:20] 2026-01-12 03:26:46,542 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 22:27:20] 2026-01-12 03:26:46,542 | INFO     | pilot state: finished 
[2026-01-11 22:27:20] 2026-01-12 03:26:46,542 | INFO     | transexitcode: 0
[2026-01-11 22:27:20] 2026-01-12 03:26:46,542 | INFO     | exeerrorcode: 0
[2026-01-11 22:27:20] 2026-01-12 03:26:46,542 | INFO     | exeerrordiag: 
[2026-01-11 22:27:20] 2026-01-12 03:26:46,542 | INFO     | exitcode: 0
[2026-01-11 22:27:20] 2026-01-12 03:26:46,542 | INFO     | exitmsg: OK
[2026-01-11 22:27:20] 2026-01-12 03:26:46,542 | INFO     | cpuconsumptiontime: 56153 s
[2026-01-11 22:27:20] 2026-01-12 03:26:46,542 | INFO     | nevents: 400
[2026-01-11 22:27:20] 2026-01-12 03:26:46,542 | INFO     | neventsw: 0
[2026-01-11 22:27:20] 2026-01-12 03:26:46,542 | INFO     | pid: 2122986
[2026-01-11 22:27:20] 2026-01-12 03:26:46,543 | INFO     | pgrp: 2122986
[2026-01-11 22:27:20] 2026-01-12 03:26:46,543 | INFO     | corecount: 8
[2026-01-11 22:27:20] 2026-01-12 03:26:46,543 | INFO     | event service: False
[2026-01-11 22:27:20] 2026-01-12 03:26:46,543 | INFO     | sizes: {0: 2283140, 1: 2283825, 2: 2284024, 13: 2284024, 24: 2284080, 35: 2284108, 41: 2284526, 46: 2284554, 24160: 2319955, 24165: 2329009, 24180: 2329211}
[2026-01-11 22:27:20] 2026-01-12 03:26:46,543 | INFO     | --------------------------------------------------
[2026-01-11 22:27:20] 2026-01-12 03:26:46,543 | INFO     | 
[2026-01-11 22:27:20] 2026-01-12 03:26:46,543 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-11 22:27:20] 2026-01-12 03:26:46,570 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 22:27:20] 2026-01-12 03:26:46,571 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 22:27:20] 2026-01-12 03:26:46,571 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 22:27:20] 2026-01-12 03:26:46,571 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 22:27:20] 2026-01-12 03:26:46,571 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 22:27:20] 2026-01-12 03:26:46,571 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 22:27:20] 2026-01-12 03:26:46,571 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 22:27:20] 2026-01-12 03:26:46,571 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 22:27:20] 2026-01-12 03:26:46,572 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 22:27:20] 2026-01-12 03:26:46,572 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 22:27:20] 2026-01-12 03:26:46,572 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 22:27:20] 2026-01-12 03:26:46,572 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 22:27:20] 2026-01-12 03:26:46,572 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 22:27:20] 2026-01-12 03:26:46,572 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 22:27:20] 2026-01-12 03:26:46,572 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 22:27:20] 2026-01-12 03:26:46,572 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 22:27:20] 2026-01-12 03:26:46,573 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 22:27:20] 2026-01-12 03:26:46,573 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 22:27:20] 2026-01-12 03:26:46,573 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 22:27:20] 2026-01-12 03:26:46,573 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 22:27:20] 2026-01-12 03:26:46,573 | INFO     | job 6963155704 has completed (purged errors)
[2026-01-11 22:27:20] 2026-01-12 03:26:46,573 | INFO     | overall cleanup function is called
[2026-01-11 22:27:20] 2026-01-12 03:26:47,583 | INFO     | --- collectZombieJob: --- 10, [2122986]
[2026-01-11 22:27:20] 2026-01-12 03:26:47,583 | INFO     | zombie collector waiting for pid 2122986
[2026-01-11 22:27:20] 2026-01-12 03:26:47,583 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 22:27:20] 2026-01-12 03:26:47,583 | INFO     | collected zombie processes
[2026-01-11 22:27:20] 2026-01-12 03:26:47,584 | INFO     | will attempt to kill all subprocesses of pid=2122986
[2026-01-11 22:27:20] 2026-01-12 03:26:47,871 | INFO     | process IDs to be killed: [2122986] (in reverse order)
[2026-01-11 22:27:20] 2026-01-12 03:26:48,035 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 22:27:20] 2026-01-12 03:26:48,036 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 22:27:20] 2026-01-12 03:26:48,055 | INFO     | did not find any defunct processes belonging to 2122986
[2026-01-11 22:27:20] 2026-01-12 03:26:48,066 | INFO     | did not find any defunct processes belonging to 2122986
[2026-01-11 22:27:20] 2026-01-12 03:26:48,066 | INFO     | ready for new job
[2026-01-11 22:27:20] 2026-01-12 03:26:48,066 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 22:27:20] 2026-01-12 03:26:48,069 | INFO     | ***************************************
[2026-01-11 22:27:20] 2026-01-12 03:26:48,069 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 22:27:20] 2026-01-12 03:26:48,069 | INFO     | ***************************************
[2026-01-11 22:27:20] 2026-01-12 03:26:48,069 | INFO     | 
[2026-01-11 22:27:20] 2026-01-12 03:26:48,072 | INFO     | architecture information:
[2026-01-11 22:27:20] 2026-01-12 03:26:48,073 | INFO     | executing command: cat /etc/os-release
[2026-01-11 22:27:20] 2026-01-12 03:26:48,128 | INFO     | cat /etc/os-release:
[2026-01-11 22:27:20] NAME="CentOS Linux"
[2026-01-11 22:27:20] VERSION="7 (Core)"
[2026-01-11 22:27:20] ID="centos"
[2026-01-11 22:27:20] ID_LIKE="rhel fedora"
[2026-01-11 22:27:20] VERSION_ID="7"
[2026-01-11 22:27:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 22:27:20] ANSI_COLOR="0;31"
[2026-01-11 22:27:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 22:27:20] HOME_URL="https://www.centos.org/"
[2026-01-11 22:27:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 22:27:20] 
[2026-01-11 22:27:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 22:27:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 22:27:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 22:27:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 22:27:20] 
[2026-01-11 22:27:20] 2026-01-12 03:26:48,129 | INFO     | ***************************************
[2026-01-11 22:27:20] 2026-01-12 03:26:48,636 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-11 22:27:20] 2026-01-12 03:26:48,662 | INFO     | sufficient remaining disk space (76476841984 B)
[2026-01-11 22:27:20] 2026-01-12 03:26:48,662 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 22:27:20] 2026-01-12 03:26:48,662 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 22:27:20] 2026-01-12 03:26:48,662 | INFO     | update_server=False
[2026-01-11 22:27:20] 2026-01-12 03:26:48,663 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 22:27:20] 2026-01-12 03:26:48,674 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 22:27:20] 2026-01-12 03:26:48,675 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 22:27:20] 2026-01-12 03:26:48,676 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 22:27:20] 2026-01-12 03:26:48,676 | INFO     | will abort loop
[2026-01-11 22:27:20] 2026-01-12 03:26:48,691 | INFO     | all job control threads have been joined
[2026-01-11 22:27:20] 2026-01-12 03:26:49,031 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 22:27:20] 2026-01-12 03:26:49,306 | INFO     | all payload control threads have been joined
[2026-01-11 22:27:20] 2026-01-12 03:26:49,418 | INFO     | all data control threads have been joined
[2026-01-11 22:27:20] 2026-01-12 03:26:49,669 | INFO     | [job] retrieve thread has finished
[2026-01-11 22:27:20] 2026-01-12 03:26:49,682 | INFO     | [job] job monitor thread has finished
[2026-01-11 22:27:20] 2026-01-12 03:26:49,695 | INFO     | [payload] validate_post thread has finished
[2026-01-11 22:27:20] 2026-01-12 03:26:49,697 | INFO     | [job] control thread has finished
[2026-01-11 22:27:20] 2026-01-12 03:26:50,312 | INFO     | [payload] control thread has finished
[2026-01-11 22:27:20] 2026-01-12 03:26:50,424 | INFO     | [data] control thread has finished
[2026-01-11 22:27:20] 2026-01-12 03:26:50,532 | INFO     | [job] validate thread has finished
[2026-01-11 22:27:20] 2026-01-12 03:26:50,627 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 22:27:20] 2026-01-12 03:26:50,754 | INFO     | [data] copytool_in thread has finished
[2026-01-11 22:27:20] 2026-01-12 03:26:51,012 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 22:27:20] 2026-01-12 03:26:51,024 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 22:27:20] 2026-01-12 03:26:51,038 | INFO     | [payload] failed_post thread has finished
[2026-01-11 22:27:20] 2026-01-12 03:26:51,040 | INFO     | [data] copytool_out thread has finished
[2026-01-11 22:27:20] 2026-01-12 03:26:51,131 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 22:27:20] 2026-01-12 03:26:51,132 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 22:27:20] 2026-01-12 03:26:51,553 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 22:27:20] 2026-01-12 03:26:52,559 | INFO     | [job] queue monitor thread has finished
[2026-01-11 22:27:20] 2026-01-12 03:26:54,635 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 22:27:20] 2026-01-12 03:27:01,368 | INFO     | [monitor] cgroup control has ended
[2026-01-11 22:27:20] 2026-01-12 03:27:02,825 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139835914929984)>', '<ExcThread(monitor, started 139835025102592)>']
[2026-01-11 22:27:20] 2026-01-12 03:27:07,851 | INFO     | all workflow threads have been joined
[2026-01-11 22:27:20] 2026-01-12 03:27:07,851 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 22:27:20] 2026-01-12 03:27:07,852 | INFO     | traces error code: 0
[2026-01-11 22:27:20] 2026-01-12 03:27:07,852 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 22:27:20] 2026-01-12 03:27:11,500 [wrapper] supervise_pilot (15 min periods counter: 28)
[2026-01-11 22:27:20] 2026-01-12 03:27:19,968 | INFO     | PID=2112423 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 22:27:20] 2026-01-12 03:27:19,969 | INFO     | .. there are 15 such processes running
[2026-01-11 22:27:20] 2026-01-12 03:27:19,969 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 22:27:20] 2026-01-12 03:27:19,969 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 22:27:20] 2026-01-12 03:27:19,969 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 22:27:20] 2026-01-12 03:27:19,969 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 22:27:20] 2026-01-12 03:27:19,969 | INFO     | [monitor] control thread has ended
[2026-01-11 22:27:20] 2026-01-12 03:27:20,191 [wrapper] ==== pilot stdout END ====
[2026-01-11 22:27:20] 2026-01-12 03:27:20,216 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 22:27:20] 2026-01-12 03:27:20,248 [wrapper] pilotpid: 2112423
[2026-01-11 22:27:20] 2026-01-12 03:27:20,291 [wrapper] Pilot exit status: 0
[2026-01-11 22:27:20] 2026-01-12 03:27:20,396 [wrapper] pandaids: 6963155704
[2026-01-11 22:27:20] 2026-01-12 03:27:20,457 [wrapper] cleanup supervisor_pilot 3084303 2112424
[2026-01-11 22:27:20] 2026-01-12 03:27:20,470 [wrapper] Test setup, not cleaning
[2026-01-11 22:27:20] 2026-01-12 03:27:20,486 [wrapper] apfmon messages muted
[2026-01-11 22:27:20] 2026-01-12 03:27:20,499 [wrapper] ==== wrapper stdout END ====
[2026-01-11 22:27:20] 2026-01-12 03:27:20,514 [wrapper] ==== wrapper stderr END ====
[2026-01-11 22:27:20]  *** Error codes and diagnostics ***
[2026-01-11 22:27:20]     "exeErrorCode": 0,
[2026-01-11 22:27:20]     "exeErrorDiag": "",
[2026-01-11 22:27:20]     "pilotErrorCode": 0,
[2026-01-11 22:27:20]     "pilotErrorDiag": "",
[2026-01-11 22:27:20]  *** Listing of results directory ***
[2026-01-11 22:27:20] total 440392
[2026-01-11 22:27:20] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 14:06 pilot3.tar.gz
[2026-01-11 22:27:20] -rwx------. 1 boincer umatlas     36322 Jan  8 14:06 runpilot2-wrapper.sh
[2026-01-11 22:27:20] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 14:07 queuedata.json
[2026-01-11 22:27:20] -rw-r--r--. 1 boincer umatlas       100 Jan 11 15:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 22:27:20] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 15:40 run_atlas
[2026-01-11 22:27:20] -rw-r--r--. 1 boincer umatlas       105 Jan 11 15:40 job.xml
[2026-01-11 22:27:20] -rw-r--r--. 2 boincer umatlas 227060012 Jan 11 15:40 EVNT.47898824._001198.pool.root.1
[2026-01-11 22:27:20] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 15:40 start_atlas.sh
[2026-01-11 22:27:20] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 15:40 shared
[2026-01-11 22:27:20] -rw-r--r--. 2 boincer umatlas    592394 Jan 11 15:40 input.tar.gz
[2026-01-11 22:27:20] -rw-r--r--. 1 boincer umatlas         0 Jan 11 15:40 boinc_lockfile
[2026-01-11 22:27:20] -rw-r--r--. 1 boincer umatlas      2518 Jan 11 15:40 pandaJob.out
[2026-01-11 22:27:20] -rw-------. 1 boincer umatlas        57 Jan 11 15:40 setup.sh.local
[2026-01-11 22:27:20] -rw-------. 1 boincer umatlas    989946 Jan 11 15:42 agis_schedconf.cvmfs.json
[2026-01-11 22:27:20] drwx------. 5 boincer umatlas      4096 Jan 11 15:42 pilot3
[2026-01-11 22:27:20] -rw-r--r--. 1 boincer umatlas      6843 Jan 11 22:19 init_data.xml
[2026-01-11 22:27:20] -rw-------. 1 boincer umatlas 212417294 Jan 11 22:25 HITS.47898826._030926.pool.root.1
[2026-01-11 22:27:20] -rw-r--r--. 1 boincer umatlas       531 Jan 11 22:25 boinc_task_state.xml
[2026-01-11 22:27:20] -rw-------. 1 boincer umatlas      1039 Jan 11 22:26 memory_monitor_summary.json
[2026-01-11 22:27:20] -rw-------. 1 boincer umatlas        95 Jan 11 22:26 pilot_heartbeat.json
[2026-01-11 22:27:20] -rw-------. 1 boincer umatlas   1516240 Jan 11 22:26 agis_ddmendpoints.agis.ALL.json
[2026-01-11 22:27:20] -rw-------. 1 boincer umatlas    580586 Jan 11 22:26 log.47898826._030926.job.log.tgz.1
[2026-01-11 22:27:20] -rw-------. 1 boincer umatlas      7820 Jan 11 22:26 heartbeat.json
[2026-01-11 22:27:20] -rw-r--r--. 1 boincer umatlas        28 Jan 11 22:27 wrapper_checkpoint.txt
[2026-01-11 22:27:20] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 22:27 boinc_mmap_file
[2026-01-11 22:27:20] -rw-------. 1 boincer umatlas       823 Jan 11 22:27 pilotlog.txt
[2026-01-11 22:27:20] -rw-------. 1 boincer umatlas   3205475 Jan 11 22:27 log.47898826._030926.job.log.1
[2026-01-11 22:27:20] -rw-------. 1 boincer umatlas       357 Jan 11 22:27 output.list
[2026-01-11 22:27:20] -rw-r--r--. 1 boincer umatlas       620 Jan 11 22:27 runtime_log
[2026-01-11 22:27:20] -rw-------. 1 boincer umatlas   3809280 Jan 11 22:27 result.tar.gz
[2026-01-11 22:27:20] -rw-r--r--. 1 boincer umatlas      9348 Jan 11 22:27 runtime_log.err
[2026-01-11 22:27:20] -rw-------. 1 boincer umatlas       658 Jan 11 22:27 28INDmVWAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmADlKDmfkM1Ho.diag
[2026-01-11 22:27:20] -rw-r--r--. 1 boincer umatlas     21229 Jan 11 22:27 stderr.txt
[2026-01-11 22:27:21] HITS file was successfully produced:
[2026-01-11 22:27:21] -rw-------. 1 boincer umatlas 212417294 Jan 11 22:25 shared/HITS.pool.root.1
[2026-01-11 22:27:21]  *** Contents of shared directory: ***
[2026-01-11 22:27:21] total 433500
[2026-01-11 22:27:21] -rw-r--r--. 2 boincer umatlas 227060012 Jan 11 15:40 ATLAS.root_0
[2026-01-11 22:27:21] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 15:40 start_atlas.sh
[2026-01-11 22:27:21] -rw-r--r--. 2 boincer umatlas    592394 Jan 11 15:40 input.tar.gz
[2026-01-11 22:27:21] -rw-------. 1 boincer umatlas 212417294 Jan 11 22:25 HITS.pool.root.1
[2026-01-11 22:27:21] -rw-------. 1 boincer umatlas   3809280 Jan 11 22:27 result.tar.gz
22:27:22 (2107559): run_atlas exited; CPU time 56854.656748
22:27:22 (2107559): called boinc_finish(0)

</stderr_txt>
]]>

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