Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:16:34 (718837): wrapper (7.7.26015): starting
09:16:34 (718837): wrapper: running run_atlas (--nthreads 10)
[2026-01-11 09:16:34] Arguments: --nthreads 10
[2026-01-11 09:16:34] Threads: 10
[2026-01-11 09:16:34] Checking for CVMFS
[2026-01-11 09:16:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 09:16:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 09:16:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 09:16:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 09:16:35] 2.13.3.0 6317 96398 359188 155019 2 13 22756740 40960000 9092 16776704 0 268405685 99.600 292165605 29796 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-11 09:16:35] CVMFS is ok
[2026-01-11 09:16:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 09:16:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 09:16:35] Further information can be found at the LHC@home message board.
[2026-01-11 09:16:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 09:16:35] Checking for apptainer binary...
[2026-01-11 09:16:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 09:16:35] Running /usr/bin/apptainer --version
[2026-01-11 09:16:35] apptainer version 1.4.5-2.el9
[2026-01-11 09:16:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 09:16:35] c6-8-12-2.aglt2.org
[2026-01-11 09:16:35] apptainer works
[2026-01-11 09:16:35] Set ATHENA_PROC_NUMBER=10
[2026-01-11 09:16:35] Set ATHENA_CORE_NUMBER=10
[2026-01-11 09:16:35] Starting ATLAS job with PandaID=6966232094
[2026-01-11 09:16:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 12:27:14]  *** The last 200 lines of the pilot log: ***
[2026-01-11 12:27:14] 2026-01-11 17:26:18,743 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 12:27:14] 2026-01-11 17:26:18,750 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2996.3190892857137
[2026-01-11 12:27:14] 2026-01-11 17:26:18,759 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966232094/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 12:27:14] 2026-01-11 17:26:18,760 | INFO     | extracted standard info from prmon json
[2026-01-11 12:27:14] 2026-01-11 17:26:18,760 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 12:27:14] 2026-01-11 17:26:18,760 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 12:27:14] 2026-01-11 17:26:18,761 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 12:27:14] 2026-01-11 17:26:18,761 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 12:27:14] 2026-01-11 17:26:18,764 | INFO     | fitting pss+swap vs Time
[2026-01-11 12:27:14] 2026-01-11 17:26:18,765 | INFO     | sum of square deviations: 1995592625.0806456
[2026-01-11 12:27:14] 2026-01-11 17:26:18,766 | INFO     | sum of deviations: -58752834975.51616
[2026-01-11 12:27:14] 2026-01-11 17:26:18,766 | INFO     | mean x: 1768146674.8548386
[2026-01-11 12:27:14] 2026-01-11 17:26:18,766 | INFO     | mean y: 2717628.4623655914
[2026-01-11 12:27:14] 2026-01-11 17:26:18,766 | INFO     | intersect: 52059248853.64457
[2026-01-11 12:27:14] 2026-01-11 17:26:18,766 | INFO     | chi2: 2.240529374700165
[2026-01-11 12:27:14] 2026-01-11 17:26:18,767 | INFO     | sum of square deviations: 1838964235.3701603
[2026-01-11 12:27:14] 2026-01-11 17:26:18,767 | INFO     | sum of deviations: -44098611143.491714
[2026-01-11 12:27:14] 2026-01-11 17:26:18,768 | INFO     | mean x: 1768146522.3535912
[2026-01-11 12:27:14] 2026-01-11 17:26:18,768 | INFO     | mean y: 2731636.6795580112
[2026-01-11 12:27:14] 2026-01-11 17:26:18,768 | INFO     | intersect: 42403124441.650696
[2026-01-11 12:27:14] 2026-01-11 17:26:18,768 | INFO     | chi2: 1.552587329923661
[2026-01-11 12:27:14] 2026-01-11 17:26:18,768 | INFO     | current chi2=1.552587329923661 (change=30.704442108399792 %)
[2026-01-11 12:27:14] 2026-01-11 17:26:18,768 | INFO     | sum of square deviations: 1690721118.2215908
[2026-01-11 12:27:14] 2026-01-11 17:26:18,769 | INFO     | sum of deviations: -41984090506.90909
[2026-01-11 12:27:14] 2026-01-11 17:26:18,769 | INFO     | mean x: 1768146369.8352273
[2026-01-11 12:27:14] 2026-01-11 17:26:18,769 | INFO     | mean y: 2733812.727272727
[2026-01-11 12:27:14] 2026-01-11 17:26:18,769 | INFO     | intersect: 43909452916.53136
[2026-01-11 12:27:14] 2026-01-11 17:26:18,770 | INFO     | chi2: 1.547590356177347
[2026-01-11 12:27:14] 2026-01-11 17:26:18,770 | INFO     | current chi2=1.547590356177347 (change=0.32184815952090257 %)
[2026-01-11 12:27:14] 2026-01-11 17:26:18,770 | INFO     | right removable region: 175
[2026-01-11 12:27:14] 2026-01-11 17:26:18,770 | INFO     | sum of square deviations: 1838946301.9337027
[2026-01-11 12:27:14] 2026-01-11 17:26:18,771 | INFO     | sum of deviations: -82779251057.08286
[2026-01-11 12:27:14] 2026-01-11 17:26:18,771 | INFO     | mean x: 1768146827.364641
[2026-01-11 12:27:14] 2026-01-11 17:26:18,771 | INFO     | mean y: 2740673.955801105
[2026-01-11 12:27:14] 2026-01-11 17:26:18,771 | INFO     | intersect: 79594988677.22507
[2026-01-11 12:27:14] 2026-01-11 17:26:18,772 | INFO     | chi2: 1.017604606860146
[2026-01-11 12:27:14] 2026-01-11 17:26:18,772 | INFO     | current chi2=1.017604606860146 (change=54.581956463020035 %)
[2026-01-11 12:27:14] 2026-01-11 17:26:18,772 | INFO     | sum of square deviations: 1690729537.994313
[2026-01-11 12:27:14] 2026-01-11 17:26:18,773 | INFO     | sum of deviations: -78219315038.23866
[2026-01-11 12:27:14] 2026-01-11 17:26:18,773 | INFO     | mean x: 1768146979.8693182
[2026-01-11 12:27:14] 2026-01-11 17:26:18,773 | INFO     | mean y: 2735928.5113636362
[2026-01-11 12:27:14] 2026-01-11 17:26:18,773 | INFO     | intersect: 81803664193.10861
[2026-01-11 12:27:14] 2026-01-11 17:26:18,773 | INFO     | chi2: 1.0032987603691936
[2026-01-11 12:27:14] 2026-01-11 17:26:18,773 | INFO     | current chi2=1.0032987603691936 (change=1.4058354683646368 %)
[2026-01-11 12:27:14] 2026-01-11 17:26:18,773 | INFO     | left removable region: 20
[2026-01-11 12:27:14] 2026-01-11 17:26:18,774 | INFO     | sum of square deviations: 1154877167.7677386
[2026-01-11 12:27:14] 2026-01-11 17:26:18,774 | INFO     | sum of deviations: -46554025498.35481
[2026-01-11 12:27:14] 2026-01-11 17:26:18,774 | INFO     | mean x: 1768146949.3612902
[2026-01-11 12:27:14] 2026-01-11 17:26:18,774 | INFO     | mean y: 2736451.7741935486
[2026-01-11 12:27:14] 2026-01-11 17:26:18,775 | INFO     | intersect: 71278159035.89989
[2026-01-11 12:27:14] 2026-01-11 17:26:18,775 | INFO     | chi2: 0.27060153827277655
[2026-01-11 12:27:14] 2026-01-11 17:26:18,775 | INFO     | current memory leak: -40.31 B/s (using 155 data points, chi2=0.27)
[2026-01-11 12:27:14] 2026-01-11 17:26:18,775 | INFO     | could have reported an average CPU frequency of 3026 MHz (10 samples)
[2026-01-11 12:27:14] 2026-01-11 17:26:18,776 | INFO     | ..............................
[2026-01-11 12:27:14] 2026-01-11 17:26:18,776 | INFO     | . Timing measurements:
[2026-01-11 12:27:14] 2026-01-11 17:26:18,776 | INFO     | . get job = 0 s
[2026-01-11 12:27:14] 2026-01-11 17:26:18,776 | INFO     | . initial setup = 2 s
[2026-01-11 12:27:14] 2026-01-11 17:26:18,776 | INFO     | . payload setup = 5 s
[2026-01-11 12:27:14] 2026-01-11 17:26:18,776 | INFO     | . stage-in = 0 s
[2026-01-11 12:27:14] 2026-01-11 17:26:18,776 | INFO     | . payload execution = 11324 s
[2026-01-11 12:27:14] 2026-01-11 17:26:18,776 | INFO     | . stage-out = 4 s
[2026-01-11 12:27:14] 2026-01-11 17:26:18,776 | INFO     | . log creation = 0 s
[2026-01-11 12:27:14] 2026-01-11 17:26:18,776 | INFO     | ..............................
[2026-01-11 12:27:14] 2026-01-11 17:26:19,019 | INFO     | 
[2026-01-11 12:27:14] 2026-01-11 17:26:19,019 | INFO     | job summary report
[2026-01-11 12:27:14] 2026-01-11 17:26:19,019 | INFO     | --------------------------------------------------
[2026-01-11 12:27:14] 2026-01-11 17:26:19,019 | INFO     | PanDA job id: 6966232094
[2026-01-11 12:27:14] 2026-01-11 17:26:19,019 | INFO     | task id: 47898826
[2026-01-11 12:27:14] 2026-01-11 17:26:19,019 | INFO     | errors: (none)
[2026-01-11 12:27:14] 2026-01-11 17:26:19,019 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 12:27:14] 2026-01-11 17:26:19,019 | INFO     | pilot state: finished 
[2026-01-11 12:27:14] 2026-01-11 17:26:19,019 | INFO     | transexitcode: 0
[2026-01-11 12:27:14] 2026-01-11 17:26:19,019 | INFO     | exeerrorcode: 0
[2026-01-11 12:27:14] 2026-01-11 17:26:19,019 | INFO     | exeerrordiag: 
[2026-01-11 12:27:14] 2026-01-11 17:26:19,019 | INFO     | exitcode: 0
[2026-01-11 12:27:14] 2026-01-11 17:26:19,020 | INFO     | exitmsg: OK
[2026-01-11 12:27:14] 2026-01-11 17:26:19,020 | INFO     | cpuconsumptiontime: 53727 s
[2026-01-11 12:27:14] 2026-01-11 17:26:19,020 | INFO     | nevents: 400
[2026-01-11 12:27:14] 2026-01-11 17:26:19,020 | INFO     | neventsw: 0
[2026-01-11 12:27:14] 2026-01-11 17:26:19,020 | INFO     | pid: 729551
[2026-01-11 12:27:14] 2026-01-11 17:26:19,020 | INFO     | pgrp: 729551
[2026-01-11 12:27:14] 2026-01-11 17:26:19,020 | INFO     | corecount: 10
[2026-01-11 12:27:14] 2026-01-11 17:26:19,020 | INFO     | event service: False
[2026-01-11 12:27:14] 2026-01-11 17:26:19,020 | INFO     | sizes: {0: 2283918, 4: 2284180, 11: 2284208, 11333: 2313575, 11338: 2322629, 11357: 2322767}
[2026-01-11 12:27:14] 2026-01-11 17:26:19,020 | INFO     | --------------------------------------------------
[2026-01-11 12:27:14] 2026-01-11 17:26:19,020 | INFO     | 
[2026-01-11 12:27:14] 2026-01-11 17:26:19,020 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 12:27:14] 2026-01-11 17:26:19,119 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 12:27:14] 2026-01-11 17:26:19,119 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 12:27:14] 2026-01-11 17:26:19,119 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 12:27:14] 2026-01-11 17:26:19,119 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 12:27:14] 2026-01-11 17:26:19,120 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 12:27:14] 2026-01-11 17:26:19,120 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 12:27:14] 2026-01-11 17:26:19,120 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 12:27:14] 2026-01-11 17:26:19,120 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 12:27:14] 2026-01-11 17:26:19,120 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 12:27:14] 2026-01-11 17:26:19,120 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 12:27:14] 2026-01-11 17:26:19,120 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 12:27:14] 2026-01-11 17:26:19,120 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 12:27:14] 2026-01-11 17:26:19,120 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 12:27:14] 2026-01-11 17:26:19,120 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 12:27:14] 2026-01-11 17:26:19,120 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 12:27:14] 2026-01-11 17:26:19,120 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 12:27:14] 2026-01-11 17:26:19,120 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 12:27:14] 2026-01-11 17:26:19,120 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 12:27:14] 2026-01-11 17:26:19,121 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 12:27:14] 2026-01-11 17:26:19,121 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 12:27:14] 2026-01-11 17:26:19,121 | INFO     | job 6966232094 has completed (purged errors)
[2026-01-11 12:27:14] 2026-01-11 17:26:19,121 | INFO     | overall cleanup function is called
[2026-01-11 12:27:14] 2026-01-11 17:26:19,567 | INFO     | PID=722512 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 12:27:14] 2026-01-11 17:26:19,567 | INFO     | .. there are 8 such processes running
[2026-01-11 12:27:14] 2026-01-11 17:26:20,137 | INFO     | --- collectZombieJob: --- 10, [729551]
[2026-01-11 12:27:14] 2026-01-11 17:26:20,138 | INFO     | zombie collector waiting for pid 729551
[2026-01-11 12:27:14] 2026-01-11 17:26:20,138 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 12:27:14] 2026-01-11 17:26:20,138 | INFO     | collected zombie processes
[2026-01-11 12:27:14] 2026-01-11 17:26:20,138 | INFO     | will attempt to kill all subprocesses of pid=729551
[2026-01-11 12:27:14] 2026-01-11 17:26:20,680 | INFO     | process IDs to be killed: [729551] (in reverse order)
[2026-01-11 12:27:14] 2026-01-11 17:26:20,946 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 12:27:14] 2026-01-11 17:26:20,946 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 12:27:14] 2026-01-11 17:26:20,962 | INFO     | did not find any defunct processes belonging to 729551
[2026-01-11 12:27:14] 2026-01-11 17:26:20,987 | INFO     | did not find any defunct processes belonging to 729551
[2026-01-11 12:27:14] 2026-01-11 17:26:20,987 | INFO     | ready for new job
[2026-01-11 12:27:14] 2026-01-11 17:26:20,987 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 12:27:14] 2026-01-11 17:26:20,989 | INFO     | ***************************************
[2026-01-11 12:27:14] 2026-01-11 17:26:20,989 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 12:27:14] 2026-01-11 17:26:20,989 | INFO     | ***************************************
[2026-01-11 12:27:14] 2026-01-11 17:26:20,989 | INFO     | 
[2026-01-11 12:27:14] 2026-01-11 17:26:20,996 | INFO     | architecture information:
[2026-01-11 12:27:14] 2026-01-11 17:26:20,997 | INFO     | executing command: cat /etc/os-release
[2026-01-11 12:27:14] 2026-01-11 17:26:21,068 | INFO     | cat /etc/os-release:
[2026-01-11 12:27:14] NAME="CentOS Linux"
[2026-01-11 12:27:14] VERSION="7 (Core)"
[2026-01-11 12:27:14] ID="centos"
[2026-01-11 12:27:14] ID_LIKE="rhel fedora"
[2026-01-11 12:27:14] VERSION_ID="7"
[2026-01-11 12:27:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 12:27:14] ANSI_COLOR="0;31"
[2026-01-11 12:27:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 12:27:14] HOME_URL="https://www.centos.org/"
[2026-01-11 12:27:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 12:27:14] 
[2026-01-11 12:27:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 12:27:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 12:27:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 12:27:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 12:27:14] 
[2026-01-11 12:27:14] 2026-01-11 17:26:21,068 | INFO     | ***************************************
[2026-01-11 12:27:14] 2026-01-11 17:26:21,572 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 12:27:14] 2026-01-11 17:26:21,713 | INFO     | sufficient remaining disk space (75459723264 B)
[2026-01-11 12:27:14] 2026-01-11 17:26:21,713 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 12:27:14] 2026-01-11 17:26:21,718 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 12:27:14] 2026-01-11 17:26:21,718 | INFO     | update_server=False
[2026-01-11 12:27:14] 2026-01-11 17:26:21,718 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 12:27:14] 2026-01-11 17:26:21,719 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 12:27:14] 2026-01-11 17:26:21,719 | INFO     | aborting loop
[2026-01-11 12:27:14] 2026-01-11 17:26:21,915 | INFO     | all data control threads have been joined
[2026-01-11 12:27:14] 2026-01-11 17:26:22,720 | INFO     | all payload control threads have been joined
[2026-01-11 12:27:14] 2026-01-11 17:26:22,725 | INFO     | [job] job monitor thread has finished
[2026-01-11 12:27:14] 2026-01-11 17:26:22,728 | INFO     | [job] retrieve thread has finished
[2026-01-11 12:27:14] 2026-01-11 17:26:22,921 | INFO     | [data] control thread has finished
[2026-01-11 12:27:14] 2026-01-11 17:26:23,053 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 12:27:14] 2026-01-11 17:26:23,054 | INFO     | [job] validate thread has finished
[2026-01-11 12:27:14] 2026-01-11 17:26:23,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 12:27:14] 2026-01-11 17:26:23,098 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 12:27:14] 2026-01-11 17:26:23,328 | INFO     | all job control threads have been joined
[2026-01-11 12:27:14] 2026-01-11 17:26:23,370 | INFO     | [payload] failed_post thread has finished
[2026-01-11 12:27:14] 2026-01-11 17:26:23,388 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 12:27:14] 2026-01-11 17:26:23,467 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 12:27:14] 2026-01-11 17:26:23,508 | INFO     | [payload] validate_post thread has finished
[2026-01-11 12:27:14] 2026-01-11 17:26:23,717 | INFO     | [data] copytool_in thread has finished
[2026-01-11 12:27:14] 2026-01-11 17:26:23,726 | INFO     | [payload] control thread has finished
[2026-01-11 12:27:14] 2026-01-11 17:26:24,033 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 12:27:14] 2026-01-11 17:26:24,183 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 12:27:14] 2026-01-11 17:26:24,334 | INFO     | [job] control thread has finished
[2026-01-11 12:27:14] 2026-01-11 17:26:25,039 | INFO     | [job] queue monitor thread has finished
[2026-01-11 12:27:14] 2026-01-11 17:26:25,093 | INFO     | [data] copytool_out thread has finished
[2026-01-11 12:27:14] 2026-01-11 17:26:28,195 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 12:27:14] 2026-01-11 17:26:52,117 | INFO     | PID=722512 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 12:27:14] 2026-01-11 17:26:52,117 | INFO     | .. there are 8 such processes running
[2026-01-11 12:27:14] 2026-01-11 17:26:52,117 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 12:27:14] 2026-01-11 17:26:52,117 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 12:27:14] 2026-01-11 17:26:52,117 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 12:27:14] 2026-01-11 17:27:05,855 | INFO     | [monitor] cgroup control has ended
[2026-01-11 12:27:14] 2026-01-11 17:27:07,628 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140289822140224)>', '<ExcThread(monitor, started 140289050138368)>']
[2026-01-11 12:27:14] 2026-01-11 17:27:08,220 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 12:27:14] 2026-01-11 17:27:08,220 | INFO     | [monitor] control thread has ended
[2026-01-11 12:27:14] 2026-01-11 17:27:12,654 | INFO     | all workflow threads have been joined
[2026-01-11 12:27:14] 2026-01-11 17:27:12,654 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 12:27:14] 2026-01-11 17:27:12,654 | INFO     | traces error code: 0
[2026-01-11 12:27:14] 2026-01-11 17:27:12,654 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 12:27:14] 2026-01-11 17:27:12,845 [wrapper] ==== pilot stdout END ====
[2026-01-11 12:27:14] 2026-01-11 17:27:12,865 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 12:27:14] 2026-01-11 17:27:12,916 [wrapper] pilotpid: 722512
[2026-01-11 12:27:14] 2026-01-11 17:27:12,951 [wrapper] Pilot exit status: 0
[2026-01-11 12:27:14] 2026-01-11 17:27:13,058 [wrapper] pandaids: 6966232094
[2026-01-11 12:27:14] 2026-01-11 17:27:13,208 [wrapper] cleanup supervisor_pilot 1061128 722513
[2026-01-11 12:27:14] 2026-01-11 17:27:13,226 [wrapper] Test setup, not cleaning
[2026-01-11 12:27:14] 2026-01-11 17:27:13,243 [wrapper] apfmon messages muted
[2026-01-11 12:27:14] 2026-01-11 17:27:13,258 [wrapper] ==== wrapper stdout END ====
[2026-01-11 12:27:14] 2026-01-11 17:27:13,286 [wrapper] ==== wrapper stderr END ====
[2026-01-11 12:27:14]  *** Error codes and diagnostics ***
[2026-01-11 12:27:14]     "exeErrorCode": 0,
[2026-01-11 12:27:14]     "exeErrorDiag": "",
[2026-01-11 12:27:14]     "pilotErrorCode": 0,
[2026-01-11 12:27:14]     "pilotErrorDiag": "",
[2026-01-11 12:27:14]  *** Listing of results directory ***
[2026-01-11 12:27:14] total 436068
[2026-01-11 12:27:14] -rwx------. 1 boincer umatlas     36322 Jan 11 09:16 runpilot2-wrapper.sh
[2026-01-11 12:27:14] -rw-r--r--. 1 boincer umatlas      5112 Jan 11 09:16 queuedata.json
[2026-01-11 12:27:14] -rw-r--r--. 1 boincer umatlas    579449 Jan 11 09:16 pilot3.tar.gz
[2026-01-11 12:27:14] -rw-r--r--. 1 boincer umatlas       100 Jan 11 09:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 12:27:14] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 09:16 run_atlas
[2026-01-11 12:27:14] -rw-r--r--. 1 boincer umatlas       105 Jan 11 09:16 job.xml
[2026-01-11 12:27:14] -rw-r--r--. 2 boincer umatlas 224067538 Jan 11 09:16 EVNT.47898824._001430.pool.root.1
[2026-01-11 12:27:14] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 09:16 start_atlas.sh
[2026-01-11 12:27:14] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 09:16 shared
[2026-01-11 12:27:14] -rw-r--r--. 2 boincer umatlas    592401 Jan 11 09:16 input.tar.gz
[2026-01-11 12:27:14] -rw-r--r--. 1 boincer umatlas         0 Jan 11 09:16 boinc_lockfile
[2026-01-11 12:27:14] -rw-r--r--. 1 boincer umatlas      2517 Jan 11 09:16 pandaJob.out
[2026-01-11 12:27:14] -rw-------. 1 boincer umatlas        57 Jan 11 09:16 setup.sh.local
[2026-01-11 12:27:14] -rw-------. 1 boincer umatlas    989556 Jan 11 09:16 agis_schedconf.cvmfs.json
[2026-01-11 12:27:14] drwx------. 5 boincer umatlas      4096 Jan 11 09:16 pilot3
[2026-01-11 12:27:14] -rw-r--r--. 1 boincer umatlas      6841 Jan 11 12:21 init_data.xml
[2026-01-11 12:27:14] -rw-------. 1 boincer umatlas 214612008 Jan 11 12:25 HITS.47898826._040821.pool.root.1
[2026-01-11 12:27:14] -rw-r--r--. 1 boincer umatlas       531 Jan 11 12:25 boinc_task_state.xml
[2026-01-11 12:27:14] -rw-------. 1 boincer umatlas      1035 Jan 11 12:25 memory_monitor_summary.json
[2026-01-11 12:27:14] -rw-------. 1 boincer umatlas   1516240 Jan 11 12:25 agis_ddmendpoints.agis.ALL.json
[2026-01-11 12:27:14] -rw-------. 1 boincer umatlas    460091 Jan 11 12:25 log.47898826._040821.job.log.tgz.1
[2026-01-11 12:27:14] -rw-------. 1 boincer umatlas      7825 Jan 11 12:26 heartbeat.json
[2026-01-11 12:27:14] -rw-------. 1 boincer umatlas        95 Jan 11 12:26 pilot_heartbeat.json
[2026-01-11 12:27:14] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 12:27 boinc_mmap_file
[2026-01-11 12:27:14] -rw-r--r--. 1 boincer umatlas        28 Jan 11 12:27 wrapper_checkpoint.txt
[2026-01-11 12:27:14] -rw-------. 1 boincer umatlas      4822 Jan 11 12:27 pilotlog.txt
[2026-01-11 12:27:14] -rw-------. 1 boincer umatlas   1509647 Jan 11 12:27 log.47898826._040821.job.log.1
[2026-01-11 12:27:14] -rw-------. 1 boincer umatlas       357 Jan 11 12:27 output.list
[2026-01-11 12:27:14] -rw-r--r--. 1 boincer umatlas       620 Jan 11 12:27 runtime_log
[2026-01-11 12:27:14] -rw-------. 1 boincer umatlas   1986560 Jan 11 12:27 result.tar.gz
[2026-01-11 12:27:14] -rw-r--r--. 1 boincer umatlas      9350 Jan 11 12:27 runtime_log.err
[2026-01-11 12:27:14] -rw-------. 1 boincer umatlas       657 Jan 11 12:27 OBmMDmoPBz8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmC3mKDmPH8lIm.diag
[2026-01-11 12:27:14] -rw-r--r--. 1 boincer umatlas     21229 Jan 11 12:27 stderr.txt
[2026-01-11 12:27:14] HITS file was successfully produced:
[2026-01-11 12:27:14] -rw-------. 1 boincer umatlas 214612008 Jan 11 12:25 shared/HITS.pool.root.1
[2026-01-11 12:27:14]  *** Contents of shared directory: ***
[2026-01-11 12:27:14] total 430944
[2026-01-11 12:27:14] -rw-r--r--. 2 boincer umatlas 224067538 Jan 11 09:16 ATLAS.root_0
[2026-01-11 12:27:14] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 09:16 start_atlas.sh
[2026-01-11 12:27:14] -rw-r--r--. 2 boincer umatlas    592401 Jan 11 09:16 input.tar.gz
[2026-01-11 12:27:14] -rw-------. 1 boincer umatlas 214612008 Jan 11 12:25 HITS.pool.root.1
[2026-01-11 12:27:14] -rw-------. 1 boincer umatlas   1986560 Jan 11 12:27 result.tar.gz
12:27:15 (718837): run_atlas exited; CPU time 53929.313880
12:27:15 (718837): called boinc_finish(0)

</stderr_txt>
]]>

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