Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:58:27 (765723): wrapper (7.7.26015): starting
08:58:27 (765723): wrapper: running run_atlas (--nthreads 9)
[2026-01-11 08:58:27] Arguments: --nthreads 9
[2026-01-11 08:58:27] Threads: 9
[2026-01-11 08:58:27] Checking for CVMFS
[2026-01-11 08:58:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 08:58:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 08:58:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 08:58:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 08:58:28] 2.13.3.0 9438 96358 190840 155018 0 282 29593842 40960001 24305 16776704 0 1228790410 99.735 877319307 48050 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-11 08:58:28] CVMFS is ok
[2026-01-11 08:58:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 08:58:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 08:58:28] Further information can be found at the LHC@home message board.
[2026-01-11 08:58:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 08:58:28] Checking for apptainer binary...
[2026-01-11 08:58:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 08:58:28] Running /usr/bin/apptainer --version
[2026-01-11 08:58:28] apptainer version 1.4.5-2.el9
[2026-01-11 08:58:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 08:58:28] c8-7-3.aglt2.org
[2026-01-11 08:58:28] apptainer works
[2026-01-11 08:58:28] Set ATHENA_PROC_NUMBER=9
[2026-01-11 08:58:28] Set ATHENA_CORE_NUMBER=9
[2026-01-11 08:58:28] Starting ATLAS job with PandaID=6966215577
[2026-01-11 08:58:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 10:11:08]  *** The last 200 lines of the pilot log: ***
[2026-01-11 10:11:08]  lfn=log.47898826._040815.job.log.tgz.1
[2026-01-11 10:11:08]  mtime=0
[2026-01-11 10:11:08]  protocol_id=None
[2026-01-11 10:11:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-11 10:11:08]  replicas=None
[2026-01-11 10:11:08]  scope=mc23_13p6TeV
[2026-01-11 10:11:08]  status=None
[2026-01-11 10:11:08]  status_code=0
[2026-01-11 10:11:08]  storage_token=
[2026-01-11 10:11:08]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6966215577/log.47898826._040815.job.log.tgz.1
[2026-01-11 10:11:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/11/log.47898826._040815.job.log.tgz.1
[2026-01-11 10:11:08]  workdir=None
[2026-01-11 10:11:08] ]
[2026-01-11 10:11:08] 2026-01-11 15:10:10,932 | INFO     | transferring file log.47898826._040815.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6966215577/log.47898826._040815.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-11 10:11:08] 2026-01-11 15:10:10,933 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6966215577/log.47898826._040815.job.log.tgz.1 /tmp/boinchome/slots/1/log.47898826._040815.job
[2026-01-11 10:11:08] 2026-01-11 15:10:10,980 | INFO     | adding to output.list: log.47898826._040815.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/11/log.47898826._040815.job.log.tg
[2026-01-11 10:11:08] 2026-01-11 15:10:10,981 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 10:11:08] 2026-01-11 15:10:10,981 | INFO     | summary of transferred files:
[2026-01-11 10:11:08] 2026-01-11 15:10:10,981 | INFO     |  -- lfn=log.47898826._040815.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 10:11:08] 2026-01-11 15:10:10,981 | INFO     | stage-out finished correctly
[2026-01-11 10:11:08] 2026-01-11 15:10:11,037 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 10:11:08] 2026-01-11 15:10:11,331 | INFO     | job 6966215577 has state=finished
[2026-01-11 10:11:08] 2026-01-11 15:10:11,332 | INFO     | preparing for final server update for job 6966215577 in state='finished'
[2026-01-11 10:11:08] 2026-01-11 15:10:11,332 | INFO     | this job has now completed (state=finished)
[2026-01-11 10:11:08] 2026-01-11 15:10:11,332 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 10:11:08] 2026-01-11 15:10:11,332 | INFO     | log transfer has been attempted: DONE
[2026-01-11 10:11:08] 2026-01-11 15:10:11,332 | INFO     | job 6966215577 has finished - writing final server update
[2026-01-11 10:11:08] 2026-01-11 15:10:11,332 | INFO     | total number of processed events: 400 (read)
[2026-01-11 10:11:08] 2026-01-11 15:10:11,333 | INFO     | executing command: lscpu
[2026-01-11 10:11:08] 2026-01-11 15:10:11,388 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 10:11:08] 2026-01-11 15:10:12,248 | INFO     | time since job start (4277s) is within the limit (349056.0s)
[2026-01-11 10:11:08] 2026-01-11 15:10:13,178 | INFO     | monitor loop #303: job 0:6966215577 is in state 'finished'
[2026-01-11 10:11:08] 2026-01-11 15:10:13,178 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 10:11:08] 2026-01-11 15:10:14,264 | INFO     | time since job start (4279s) is within the limit (349056.0s)
[2026-01-11 10:11:08] 2026-01-11 15:10:15,682 | INFO     | monitor loop #304: job 0:6966215577 is in state 'finished'
[2026-01-11 10:11:08] 2026-01-11 15:10:15,682 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 10:11:08] 2026-01-11 15:10:16,270 | INFO     | time since job start (4281s) is within the limit (349056.0s)
[2026-01-11 10:11:08] 2026-01-11 15:10:17,068 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 10:11:08] 2026-01-11 15:10:17,073 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.1017031250017
[2026-01-11 10:11:08] 2026-01-11 15:10:17,086 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6966215577/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 10:11:08] 2026-01-11 15:10:17,086 | INFO     | extracted standard info from prmon json
[2026-01-11 10:11:08] 2026-01-11 15:10:17,086 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 10:11:08] 2026-01-11 15:10:17,086 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 10:11:08] 2026-01-11 15:10:17,087 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 10:11:08] 2026-01-11 15:10:17,087 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 10:11:08] 2026-01-11 15:10:17,088 | INFO     | fitting pss+swap vs Time
[2026-01-11 10:11:08] 2026-01-11 15:10:17,088 | INFO     | sum of square deviations: 73882315.5
[2026-01-11 10:11:08] 2026-01-11 15:10:17,088 | INFO     | sum of deviations: -5945706996.5
[2026-01-11 10:11:08] 2026-01-11 15:10:17,088 | INFO     | mean x: 1768142164.5
[2026-01-11 10:11:08] 2026-01-11 15:10:17,088 | INFO     | mean y: 2649150.85483871
[2026-01-11 10:11:08] 2026-01-11 15:10:17,088 | INFO     | intersect: 142294551714.11847
[2026-01-11 10:11:08] 2026-01-11 15:10:17,088 | INFO     | chi2: 0.10391238933214775
[2026-01-11 10:11:08] 2026-01-11 15:10:17,088 | INFO     | current memory leak: -80.48 B/s (using 62 data points, chi2=0.10)
[2026-01-11 10:11:08] 2026-01-11 15:10:17,088 | INFO     | could have reported an average CPU frequency of 3800 MHz (6 samples)
[2026-01-11 10:11:08] 2026-01-11 15:10:17,089 | INFO     | ..............................
[2026-01-11 10:11:08] 2026-01-11 15:10:17,089 | INFO     | . Timing measurements:
[2026-01-11 10:11:08] 2026-01-11 15:10:17,089 | INFO     | . get job = 0 s
[2026-01-11 10:11:08] 2026-01-11 15:10:17,089 | INFO     | . initial setup = 3 s
[2026-01-11 10:11:08] 2026-01-11 15:10:17,089 | INFO     | . payload setup = 18 s
[2026-01-11 10:11:08] 2026-01-11 15:10:17,089 | INFO     | . stage-in = 0 s
[2026-01-11 10:11:08] 2026-01-11 15:10:17,089 | INFO     | . payload execution = 4219 s
[2026-01-11 10:11:08] 2026-01-11 15:10:17,089 | INFO     | . stage-out = 0 s
[2026-01-11 10:11:08] 2026-01-11 15:10:17,089 | INFO     | . log creation = 0 s
[2026-01-11 10:11:08] 2026-01-11 15:10:17,089 | INFO     | ..............................
[2026-01-11 10:11:08] 2026-01-11 15:10:17,198 | INFO     | 
[2026-01-11 10:11:08] 2026-01-11 15:10:17,198 | INFO     | job summary report
[2026-01-11 10:11:08] 2026-01-11 15:10:17,198 | INFO     | --------------------------------------------------
[2026-01-11 10:11:08] 2026-01-11 15:10:17,198 | INFO     | PanDA job id: 6966215577
[2026-01-11 10:11:08] 2026-01-11 15:10:17,198 | INFO     | task id: 47898826
[2026-01-11 10:11:08] 2026-01-11 15:10:17,198 | INFO     | errors: (none)
[2026-01-11 10:11:08] 2026-01-11 15:10:17,198 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 10:11:08] 2026-01-11 15:10:17,198 | INFO     | pilot state: finished 
[2026-01-11 10:11:08] 2026-01-11 15:10:17,198 | INFO     | transexitcode: 0
[2026-01-11 10:11:08] 2026-01-11 15:10:17,198 | INFO     | exeerrorcode: 0
[2026-01-11 10:11:08] 2026-01-11 15:10:17,198 | INFO     | exeerrordiag: 
[2026-01-11 10:11:08] 2026-01-11 15:10:17,198 | INFO     | exitcode: 0
[2026-01-11 10:11:08] 2026-01-11 15:10:17,198 | INFO     | exitmsg: OK
[2026-01-11 10:11:08] 2026-01-11 15:10:17,198 | INFO     | cpuconsumptiontime: 30891 s
[2026-01-11 10:11:08] 2026-01-11 15:10:17,198 | INFO     | nevents: 400
[2026-01-11 10:11:08] 2026-01-11 15:10:17,198 | INFO     | neventsw: 0
[2026-01-11 10:11:08] 2026-01-11 15:10:17,198 | INFO     | pid: 777219
[2026-01-11 10:11:08] 2026-01-11 15:10:17,198 | INFO     | pgrp: 777219
[2026-01-11 10:11:08] 2026-01-11 15:10:17,199 | INFO     | corecount: 9
[2026-01-11 10:11:08] 2026-01-11 15:10:17,199 | INFO     | event service: False
[2026-01-11 10:11:08] 2026-01-11 15:10:17,199 | INFO     | sizes: {0: 2283916, 11: 2283916, 14: 2284206, 21: 2284234, 4241: 2310472, 4242: 2319654, 4248: 2319792}
[2026-01-11 10:11:08] 2026-01-11 15:10:17,199 | INFO     | --------------------------------------------------
[2026-01-11 10:11:08] 2026-01-11 15:10:17,199 | INFO     | 
[2026-01-11 10:11:08] 2026-01-11 15:10:17,199 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-11 10:11:08] 2026-01-11 15:10:17,217 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 10:11:08] 2026-01-11 15:10:17,218 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 10:11:08] 2026-01-11 15:10:17,218 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 10:11:08] 2026-01-11 15:10:17,218 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 10:11:08] 2026-01-11 15:10:17,218 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 10:11:08] 2026-01-11 15:10:17,218 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 10:11:08] 2026-01-11 15:10:17,218 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 10:11:08] 2026-01-11 15:10:17,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 10:11:08] 2026-01-11 15:10:17,218 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 10:11:08] 2026-01-11 15:10:17,218 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 10:11:08] 2026-01-11 15:10:17,218 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 10:11:08] 2026-01-11 15:10:17,218 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 10:11:08] 2026-01-11 15:10:17,218 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 10:11:08] 2026-01-11 15:10:17,218 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 10:11:08] 2026-01-11 15:10:17,218 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 10:11:08] 2026-01-11 15:10:17,218 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 10:11:08] 2026-01-11 15:10:17,218 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 10:11:08] 2026-01-11 15:10:17,218 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 10:11:08] 2026-01-11 15:10:17,218 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 10:11:08] 2026-01-11 15:10:17,219 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 10:11:08] 2026-01-11 15:10:17,219 | INFO     | job 6966215577 has completed (purged errors)
[2026-01-11 10:11:08] 2026-01-11 15:10:17,219 | INFO     | overall cleanup function is called
[2026-01-11 10:11:08] 2026-01-11 15:10:18,227 | INFO     | --- collectZombieJob: --- 10, [777219]
[2026-01-11 10:11:08] 2026-01-11 15:10:18,227 | INFO     | zombie collector waiting for pid 777219
[2026-01-11 10:11:08] 2026-01-11 15:10:18,227 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 10:11:08] 2026-01-11 15:10:18,227 | INFO     | collected zombie processes
[2026-01-11 10:11:08] 2026-01-11 15:10:18,227 | INFO     | will attempt to kill all subprocesses of pid=777219
[2026-01-11 10:11:08] 2026-01-11 15:10:18,700 | INFO     | process IDs to be killed: [777219] (in reverse order)
[2026-01-11 10:11:08] 2026-01-11 15:10:18,842 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 10:11:08] 2026-01-11 15:10:18,842 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 10:11:08] 2026-01-11 15:10:18,864 | INFO     | did not find any defunct processes belonging to 777219
[2026-01-11 10:11:08] 2026-01-11 15:10:18,881 | INFO     | did not find any defunct processes belonging to 777219
[2026-01-11 10:11:08] 2026-01-11 15:10:18,881 | INFO     | ready for new job
[2026-01-11 10:11:08] 2026-01-11 15:10:18,881 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 10:11:08] 2026-01-11 15:10:18,882 | INFO     | ***************************************
[2026-01-11 10:11:08] 2026-01-11 15:10:18,882 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 10:11:08] 2026-01-11 15:10:18,882 | INFO     | ***************************************
[2026-01-11 10:11:08] 2026-01-11 15:10:18,882 | INFO     | 
[2026-01-11 10:11:08] 2026-01-11 15:10:18,887 | INFO     | architecture information:
[2026-01-11 10:11:08] 2026-01-11 15:10:18,887 | INFO     | executing command: cat /etc/os-release
[2026-01-11 10:11:08] 2026-01-11 15:10:18,899 | INFO     | cat /etc/os-release:
[2026-01-11 10:11:08] NAME="CentOS Linux"
[2026-01-11 10:11:08] VERSION="7 (Core)"
[2026-01-11 10:11:08] ID="centos"
[2026-01-11 10:11:08] ID_LIKE="rhel fedora"
[2026-01-11 10:11:08] VERSION_ID="7"
[2026-01-11 10:11:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 10:11:08] ANSI_COLOR="0;31"
[2026-01-11 10:11:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 10:11:08] HOME_URL="https://www.centos.org/"
[2026-01-11 10:11:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 10:11:08] 
[2026-01-11 10:11:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 10:11:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 10:11:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 10:11:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 10:11:08] 
[2026-01-11 10:11:08] 2026-01-11 15:10:18,899 | INFO     | ***************************************
[2026-01-11 10:11:08] 2026-01-11 15:10:19,402 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-11 10:11:08] 2026-01-11 15:10:19,418 | INFO     | sufficient remaining disk space (172995117056 B)
[2026-01-11 10:11:08] 2026-01-11 15:10:19,418 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 10:11:08] 2026-01-11 15:10:19,418 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 10:11:08] 2026-01-11 15:10:19,418 | INFO     | update_server=False
[2026-01-11 10:11:08] 2026-01-11 15:10:19,418 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 10:11:08] 2026-01-11 15:10:19,418 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 10:11:08] 2026-01-11 15:10:19,418 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 10:11:08] 2026-01-11 15:10:19,419 | INFO     | aborting loop
[2026-01-11 10:11:08] 2026-01-11 15:10:20,251 | INFO     | all payload control threads have been joined
[2026-01-11 10:11:08] 2026-01-11 15:10:20,364 | INFO     | all data control threads have been joined
[2026-01-11 10:11:08] 2026-01-11 15:10:20,424 | INFO     | [job] retrieve thread has finished
[2026-01-11 10:11:08] 2026-01-11 15:10:20,424 | INFO     | [job] job monitor thread has finished
[2026-01-11 10:11:08] 2026-01-11 15:10:20,598 | INFO     | [job] validate thread has finished
[2026-01-11 10:11:08] 2026-01-11 15:10:20,797 | INFO     | all job control threads have been joined
[2026-01-11 10:11:08] 2026-01-11 15:10:20,853 | INFO     | [data] copytool_in thread has finished
[2026-01-11 10:11:08] 2026-01-11 15:10:20,919 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 10:11:08] 2026-01-11 15:10:20,940 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 10:11:08] 2026-01-11 15:10:21,019 | INFO     | [payload] validate_post thread has finished
[2026-01-11 10:11:08] 2026-01-11 15:10:21,142 | INFO     | [payload] failed_post thread has finished
[2026-01-11 10:11:08] 2026-01-11 15:10:21,256 | INFO     | [payload] control thread has finished
[2026-01-11 10:11:08] 2026-01-11 15:10:21,370 | INFO     | [data] control thread has finished
[2026-01-11 10:11:08] 2026-01-11 15:10:21,425 | INFO     | [data] copytool_out thread has finished
[2026-01-11 10:11:08] 2026-01-11 15:10:21,598 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 10:11:08] 2026-01-11 15:10:21,803 | INFO     | [job] control thread has finished
[2026-01-11 10:11:08] 2026-01-11 15:10:21,843 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 10:11:08] 2026-01-11 15:10:22,156 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 10:11:08] 2026-01-11 15:10:23,162 | INFO     | [job] queue monitor thread has finished
[2026-01-11 10:11:08] 2026-01-11 15:10:25,606 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 10:11:08] 2026-01-11 15:10:30,113 | INFO     | job.realtimelogging is not enabled
[2026-01-11 10:11:08] 2026-01-11 15:10:31,118 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 10:11:08] 2026-01-11 15:10:49,834 | INFO     | PID=769600 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 10:11:08] 2026-01-11 15:10:49,834 | INFO     | .. there are 24 such processes running
[2026-01-11 10:11:08] 2026-01-11 15:10:49,834 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 10:11:08] 2026-01-11 15:10:49,834 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 10:11:08] 2026-01-11 15:10:49,834 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 10:11:08] 2026-01-11 15:11:02,241 | INFO     | [monitor] cgroup control has ended
[2026-01-11 10:11:08] 2026-01-11 15:11:02,300 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140241199728448)>', '<ExcThread(monitor, started 140240849188608)>']
[2026-01-11 10:11:08] 2026-01-11 15:11:02,916 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 10:11:08] 2026-01-11 15:11:02,916 | INFO     | [monitor] control thread has ended
[2026-01-11 10:11:08] 2026-01-11 15:11:07,326 | INFO     | all workflow threads have been joined
[2026-01-11 10:11:08] 2026-01-11 15:11:07,326 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 10:11:08] 2026-01-11 15:11:07,328 | INFO     | traces error code: 0
[2026-01-11 10:11:08] 2026-01-11 15:11:07,329 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 10:11:08] 2026-01-11 15:11:07,555 [wrapper] ==== pilot stdout END ====
[2026-01-11 10:11:08] 2026-01-11 15:11:07,573 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 10:11:08] 2026-01-11 15:11:07,604 [wrapper] pilotpid: 769600
[2026-01-11 10:11:08] 2026-01-11 15:11:07,616 [wrapper] Pilot exit status: 0
[2026-01-11 10:11:08] 2026-01-11 15:11:07,733 [wrapper] pandaids: 6966215577
[2026-01-11 10:11:08] 2026-01-11 15:11:07,973 [wrapper] cleanup supervisor_pilot 1024206 769601
[2026-01-11 10:11:08] 2026-01-11 15:11:07,997 [wrapper] Test setup, not cleaning
[2026-01-11 10:11:08] 2026-01-11 15:11:07,999 [wrapper] apfmon messages muted
[2026-01-11 10:11:08] 2026-01-11 15:11:08,009 [wrapper] ==== wrapper stdout END ====
[2026-01-11 10:11:08] 2026-01-11 15:11:08,011 [wrapper] ==== wrapper stderr END ====
[2026-01-11 10:11:08]  *** Error codes and diagnostics ***
[2026-01-11 10:11:08]     "exeErrorCode": 0,
[2026-01-11 10:11:08]     "exeErrorDiag": "",
[2026-01-11 10:11:08]     "pilotErrorCode": 0,
[2026-01-11 10:11:08]     "pilotErrorDiag": "",
[2026-01-11 10:11:08]  *** Listing of results directory ***
[2026-01-11 10:11:08] total 430140
[2026-01-11 10:11:08] -rw-r--r--. 1 boincer umatlas    579449 Jan 11 08:09 pilot3.tar.gz
[2026-01-11 10:11:08] -rwx------. 1 boincer umatlas     36322 Jan 11 08:50 runpilot2-wrapper.sh
[2026-01-11 10:11:08] -rw-r--r--. 1 boincer umatlas      5112 Jan 11 08:50 queuedata.json
[2026-01-11 10:11:08] -rw-r--r--. 1 boincer umatlas       100 Jan 11 08:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 10:11:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 08:58 run_atlas
[2026-01-11 10:11:08] -rw-r--r--. 1 boincer umatlas       105 Jan 11 08:58 job.xml
[2026-01-11 10:11:08] -rw-r--r--. 2 boincer umatlas 221687098 Jan 11 08:58 EVNT.47898824._000334.pool.root.1
[2026-01-11 10:11:08] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 08:58 start_atlas.sh
[2026-01-11 10:11:08] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 08:58 shared
[2026-01-11 10:11:08] -rw-r--r--. 2 boincer umatlas    592403 Jan 11 08:58 input.tar.gz
[2026-01-11 10:11:08] -rw-r--r--. 1 boincer umatlas         0 Jan 11 08:58 boinc_lockfile
[2026-01-11 10:11:08] -rw-r--r--. 1 boincer umatlas      2516 Jan 11 08:58 pandaJob.out
[2026-01-11 10:11:08] -rw-------. 1 boincer umatlas        57 Jan 11 08:58 setup.sh.local
[2026-01-11 10:11:08] -rw-------. 1 boincer umatlas    989556 Jan 11 08:58 agis_schedconf.cvmfs.json
[2026-01-11 10:11:08] -rw-------. 1 boincer umatlas   1516240 Jan 11 08:58 agis_ddmendpoints.agis.ALL.json
[2026-01-11 10:11:08] drwx------. 5 boincer umatlas      4096 Jan 11 08:58 pilot3
[2026-01-11 10:11:08] -rw-------. 1 boincer umatlas 212937768 Jan 11 10:09 HITS.47898826._040815.pool.root.1
[2026-01-11 10:11:08] -rw-r--r--. 1 boincer umatlas       529 Jan 11 10:09 boinc_task_state.xml
[2026-01-11 10:11:08] -rw-r--r--. 1 boincer umatlas      7171 Jan 11 10:10 init_data.xml
[2026-01-11 10:11:08] -rw-------. 1 boincer umatlas        95 Jan 11 10:10 pilot_heartbeat.json
[2026-01-11 10:11:08] -rw-------. 1 boincer umatlas      1029 Jan 11 10:10 memory_monitor_summary.json
[2026-01-11 10:11:08] -rw-------. 1 boincer umatlas    338537 Jan 11 10:10 log.47898826._040815.job.log.tgz.1
[2026-01-11 10:11:08] -rw-------. 1 boincer umatlas      7767 Jan 11 10:10 heartbeat.json
[2026-01-11 10:11:08] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 10:10 boinc_mmap_file
[2026-01-11 10:11:08] -rw-r--r--. 1 boincer umatlas        27 Jan 11 10:10 wrapper_checkpoint.txt
[2026-01-11 10:11:08] -rw-------. 1 boincer umatlas      4896 Jan 11 10:11 pilotlog.txt
[2026-01-11 10:11:08] -rw-------. 1 boincer umatlas    621859 Jan 11 10:11 log.47898826._040815.job.log.1
[2026-01-11 10:11:08] -rw-------. 1 boincer umatlas       357 Jan 11 10:11 output.list
[2026-01-11 10:11:08] -rw-r--r--. 1 boincer umatlas       620 Jan 11 10:11 runtime_log
[2026-01-11 10:11:08] -rw-------. 1 boincer umatlas    983040 Jan 11 10:11 result.tar.gz
[2026-01-11 10:11:08] -rw-------. 1 boincer umatlas       651 Jan 11 10:11 XfSMDmv0Az8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm62mKDmGZuLan.diag
[2026-01-11 10:11:08] -rw-r--r--. 1 boincer umatlas      9332 Jan 11 10:11 runtime_log.err
[2026-01-11 10:11:08] -rw-r--r--. 1 boincer umatlas     21655 Jan 11 10:11 stderr.txt
[2026-01-11 10:11:08] HITS file was successfully produced:
[2026-01-11 10:11:08] -rw-------. 1 boincer umatlas 212937768 Jan 11 10:09 shared/HITS.pool.root.1
[2026-01-11 10:11:08]  *** Contents of shared directory: ***
[2026-01-11 10:11:08] total 426004
[2026-01-11 10:11:08] -rw-r--r--. 2 boincer umatlas 221687098 Jan 11 08:58 ATLAS.root_0
[2026-01-11 10:11:08] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 08:58 start_atlas.sh
[2026-01-11 10:11:08] -rw-r--r--. 2 boincer umatlas    592403 Jan 11 08:58 input.tar.gz
[2026-01-11 10:11:08] -rw-------. 1 boincer umatlas 212937768 Jan 11 10:09 HITS.pool.root.1
[2026-01-11 10:11:08] -rw-------. 1 boincer umatlas    983040 Jan 11 10:11 result.tar.gz
10:11:30 (765723): run_atlas exited; CPU time 31006.594312
10:11:30 (765723): called boinc_finish(0)

</stderr_txt>
]]>

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