Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:54:48 (108147): wrapper (7.7.26015): starting
07:54:48 (108147): wrapper: running run_atlas (--nthreads 11)
[2026-01-11 07:54:48] Arguments: --nthreads 11
[2026-01-11 07:54:48] Threads: 11
[2026-01-11 07:54:48] Checking for CVMFS
[2026-01-11 07:54:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 07:54:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 07:54:48] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 07:54:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 07:54:49] 2.13.3.0 9428 94621 340196 155017 2 652 17913101 18491392 16327 16776704 0 433200325 99.371 676767339 33270 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-11 07:54:49] CVMFS is ok
[2026-01-11 07:54:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 07:54:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 07:54:49] Further information can be found at the LHC@home message board.
[2026-01-11 07:54:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 07:54:49] Checking for apptainer binary...
[2026-01-11 07:54:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 07:54:49] Running /usr/bin/apptainer --version
[2026-01-11 07:54:49] apptainer version 1.4.5-2.el9
[2026-01-11 07:54:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 07:54:50] c-8-38.aglt2.org
[2026-01-11 07:54:50] apptainer works
[2026-01-11 07:54:50] Set ATHENA_PROC_NUMBER=11
[2026-01-11 07:54:50] Set ATHENA_CORE_NUMBER=11
[2026-01-11 07:54:50] Starting ATLAS job with PandaID=6966194494
[2026-01-11 07:54:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 16:43:52]  *** The last 200 lines of the pilot log: ***
[2026-01-11 16:43:52] 2026-01-11 21:43:14,490 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 16:43:52] 2026-01-11 21:43:14,630 | INFO     | time since job start (31672s) is within the limit (349056.0s)
[2026-01-11 16:43:52] 2026-01-11 21:43:15,594 | INFO     | monitor loop #1776: job 0:6966194494 is in state 'finished'
[2026-01-11 16:43:52] 2026-01-11 21:43:15,594 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 16:43:52] 2026-01-11 21:43:16,635 | INFO     | time since job start (31674s) is within the limit (349056.0s)
[2026-01-11 16:43:52] 2026-01-11 21:43:18,097 | INFO     | monitor loop #1777: job 0:6966194494 is in state 'finished'
[2026-01-11 16:43:52] 2026-01-11 21:43:18,097 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 16:43:52] 2026-01-11 21:43:18,385 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 16:43:52] 2026-01-11 21:43:18,392 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.2386749999996
[2026-01-11 16:43:52] 2026-01-11 21:43:18,399 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966194494/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 16:43:52] 2026-01-11 21:43:18,400 | INFO     | extracted standard info from prmon json
[2026-01-11 16:43:52] 2026-01-11 21:43:18,400 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 16:43:52] 2026-01-11 21:43:18,400 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 16:43:52] 2026-01-11 21:43:18,401 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 16:43:52] 2026-01-11 21:43:18,401 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 16:43:52] 2026-01-11 21:43:18,411 | INFO     | fitting pss+swap vs Time
[2026-01-11 16:43:52] 2026-01-11 21:43:18,412 | INFO     | sum of square deviations: 43098940071.013535
[2026-01-11 16:43:52] 2026-01-11 21:43:18,419 | INFO     | sum of deviations: 148753548869.52707
[2026-01-11 16:43:52] 2026-01-11 21:43:18,420 | INFO     | mean x: 1768151970.8243244
[2026-01-11 16:43:52] 2026-01-11 21:43:18,420 | INFO     | mean y: 2656349.862934363
[2026-01-11 16:43:52] 2026-01-11 21:43:18,420 | INFO     | intersect: -6100019961.14133
[2026-01-11 16:43:52] 2026-01-11 21:43:18,421 | INFO     | chi2: 2.0587535864125206
[2026-01-11 16:43:52] 2026-01-11 21:43:18,422 | INFO     | sum of square deviations: 41863085462.33147
[2026-01-11 16:43:52] 2026-01-11 21:43:18,429 | INFO     | sum of deviations: 146175343647.59842
[2026-01-11 16:43:52] 2026-01-11 21:43:18,429 | INFO     | mean x: 1768151818.3352826
[2026-01-11 16:43:52] 2026-01-11 21:43:18,430 | INFO     | mean y: 2656031.7348927874
[2026-01-11 16:43:52] 2026-01-11 21:43:18,430 | INFO     | intersect: -6171284489.177003
[2026-01-11 16:43:52] 2026-01-11 21:43:18,431 | INFO     | chi2: 2.0590424915871486
[2026-01-11 16:43:52] 2026-01-11 21:43:18,431 | INFO     | current chi2=2.0590424915871486 (change=-0.014033013787308863 %)
[2026-01-11 16:43:52] 2026-01-11 21:43:18,431 | INFO     | right removable region: 512
[2026-01-11 16:43:52] 2026-01-11 21:43:18,432 | INFO     | sum of square deviations: 41862698354.65891
[2026-01-11 16:43:52] 2026-01-11 21:43:18,439 | INFO     | sum of deviations: 37622943296.60819
[2026-01-11 16:43:52] 2026-01-11 21:43:18,439 | INFO     | mean x: 1768152123.3372319
[2026-01-11 16:43:52] 2026-01-11 21:43:18,439 | INFO     | mean y: 2670015.695906433
[2026-01-11 16:43:52] 2026-01-11 21:43:18,440 | INFO     | intersect: -1586407843.3688252
[2026-01-11 16:43:52] 2026-01-11 21:43:18,440 | INFO     | chi2: 0.12217917983444902
[2026-01-11 16:43:52] 2026-01-11 21:43:18,441 | INFO     | current chi2=0.12217917983444902 (change=94.06538108101844 %)
[2026-01-11 16:43:52] 2026-01-11 21:43:18,441 | INFO     | sum of square deviations: 40650317550.63002
[2026-01-11 16:43:52] 2026-01-11 21:43:18,448 | INFO     | sum of deviations: 27774825882.85827
[2026-01-11 16:43:52] 2026-01-11 21:43:18,449 | INFO     | mean x: 1768152275.8503938
[2026-01-11 16:43:52] 2026-01-11 21:43:18,449 | INFO     | mean y: 2671251.4586614175
[2026-01-11 16:43:52] 2026-01-11 21:43:18,449 | INFO     | intersect: -1205440383.461719
[2026-01-11 16:43:52] 2026-01-11 21:43:18,450 | INFO     | chi2: 0.10814060460407723
[2026-01-11 16:43:52] 2026-01-11 21:43:18,450 | INFO     | current chi2=0.10814060460407723 (change=11.490153436447887 %)
[2026-01-11 16:43:52] 2026-01-11 21:43:18,450 | INFO     | left removable region: 20
[2026-01-11 16:43:52] 2026-01-11 21:43:18,451 | INFO     | sum of square deviations: 36929081829.674835
[2026-01-11 16:43:52] 2026-01-11 21:43:18,457 | INFO     | sum of deviations: 50810193775.59354
[2026-01-11 16:43:52] 2026-01-11 21:43:18,458 | INFO     | mean x: 1768152397.8699186
[2026-01-11 16:43:52] 2026-01-11 21:43:18,458 | INFO     | mean y: 2667797.337398374
[2026-01-11 16:43:52] 2026-01-11 21:43:18,458 | INFO     | intersect: -2430107714.7891636
[2026-01-11 16:43:52] 2026-01-11 21:43:18,459 | INFO     | chi2: 0.010253099570753536
[2026-01-11 16:43:52] 2026-01-11 21:43:18,459 | INFO     | current memory leak: 1.38 B/s (using 492 data points, chi2=0.01)
[2026-01-11 16:43:52] 2026-01-11 21:43:18,460 | INFO     | could have reported an average CPU frequency of 2600 MHz (21 samples)
[2026-01-11 16:43:52] 2026-01-11 21:43:18,460 | INFO     | ..............................
[2026-01-11 16:43:52] 2026-01-11 21:43:18,460 | INFO     | . Timing measurements:
[2026-01-11 16:43:52] 2026-01-11 21:43:18,460 | INFO     | . get job = 0 s
[2026-01-11 16:43:52] 2026-01-11 21:43:18,461 | INFO     | . initial setup = 4 s
[2026-01-11 16:43:52] 2026-01-11 21:43:18,461 | INFO     | . payload setup = 15 s
[2026-01-11 16:43:52] 2026-01-11 21:43:18,461 | INFO     | . stage-in = 0 s
[2026-01-11 16:43:52] 2026-01-11 21:43:18,461 | INFO     | . payload execution = 31607 s
[2026-01-11 16:43:52] 2026-01-11 21:43:18,461 | INFO     | . stage-out = 2 s
[2026-01-11 16:43:52] 2026-01-11 21:43:18,461 | INFO     | . log creation = 0 s
[2026-01-11 16:43:52] 2026-01-11 21:43:18,461 | INFO     | ..............................
[2026-01-11 16:43:52] 2026-01-11 21:43:18,640 | INFO     | time since job start (31676s) is within the limit (349056.0s)
[2026-01-11 16:43:52] 2026-01-11 21:43:18,689 | INFO     | 
[2026-01-11 16:43:52] 2026-01-11 21:43:18,689 | INFO     | job summary report
[2026-01-11 16:43:52] 2026-01-11 21:43:18,689 | INFO     | --------------------------------------------------
[2026-01-11 16:43:52] 2026-01-11 21:43:18,689 | INFO     | PanDA job id: 6966194494
[2026-01-11 16:43:52] 2026-01-11 21:43:18,689 | INFO     | task id: 47898826
[2026-01-11 16:43:52] 2026-01-11 21:43:18,689 | INFO     | errors: (none)
[2026-01-11 16:43:52] 2026-01-11 21:43:18,689 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 16:43:52] 2026-01-11 21:43:18,690 | INFO     | pilot state: finished 
[2026-01-11 16:43:52] 2026-01-11 21:43:18,690 | INFO     | transexitcode: 0
[2026-01-11 16:43:52] 2026-01-11 21:43:18,690 | INFO     | exeerrorcode: 0
[2026-01-11 16:43:52] 2026-01-11 21:43:18,690 | INFO     | exeerrordiag: 
[2026-01-11 16:43:52] 2026-01-11 21:43:18,690 | INFO     | exitcode: 0
[2026-01-11 16:43:52] 2026-01-11 21:43:18,690 | INFO     | exitmsg: OK
[2026-01-11 16:43:52] 2026-01-11 21:43:18,690 | INFO     | cpuconsumptiontime: 70921 s
[2026-01-11 16:43:52] 2026-01-11 21:43:18,690 | INFO     | nevents: 400
[2026-01-11 16:43:52] 2026-01-11 21:43:18,690 | INFO     | neventsw: 0
[2026-01-11 16:43:52] 2026-01-11 21:43:18,691 | INFO     | pid: 125899
[2026-01-11 16:43:52] 2026-01-11 21:43:18,691 | INFO     | pgrp: 125899
[2026-01-11 16:43:52] 2026-01-11 21:43:18,691 | INFO     | corecount: 11
[2026-01-11 16:43:52] 2026-01-11 21:43:18,691 | INFO     | event service: False
[2026-01-11 16:43:52] 2026-01-11 21:43:18,691 | INFO     | sizes: {0: 2283090, 1: 2283775, 2: 2283974, 3: 2283974, 14: 2284002, 22: 2284292, 25: 2284448, 31627: 2322490, 31630: 2331488, 31631: 2331544, 31635: 2331738}
[2026-01-11 16:43:52] 2026-01-11 21:43:18,691 | INFO     | --------------------------------------------------
[2026-01-11 16:43:52] 2026-01-11 21:43:18,691 | INFO     | 
[2026-01-11 16:43:52] 2026-01-11 21:43:18,691 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 16:43:52] 2026-01-11 21:43:18,710 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 16:43:52] 2026-01-11 21:43:18,710 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 16:43:52] 2026-01-11 21:43:18,710 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 16:43:52] 2026-01-11 21:43:18,711 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 16:43:52] 2026-01-11 21:43:18,711 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 16:43:52] 2026-01-11 21:43:18,711 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 16:43:52] 2026-01-11 21:43:18,711 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 16:43:52] 2026-01-11 21:43:18,711 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 16:43:52] 2026-01-11 21:43:18,711 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 16:43:52] 2026-01-11 21:43:18,711 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 16:43:52] 2026-01-11 21:43:18,711 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 16:43:52] 2026-01-11 21:43:18,712 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 16:43:52] 2026-01-11 21:43:18,712 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 16:43:52] 2026-01-11 21:43:18,712 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 16:43:52] 2026-01-11 21:43:18,712 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 16:43:52] 2026-01-11 21:43:18,712 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 16:43:52] 2026-01-11 21:43:18,712 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 16:43:52] 2026-01-11 21:43:18,712 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 16:43:52] 2026-01-11 21:43:18,712 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 16:43:52] 2026-01-11 21:43:18,712 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 16:43:52] 2026-01-11 21:43:18,713 | INFO     | job 6966194494 has completed (purged errors)
[2026-01-11 16:43:52] 2026-01-11 21:43:18,713 | INFO     | overall cleanup function is called
[2026-01-11 16:43:52] 2026-01-11 21:43:19,721 | INFO     | --- collectZombieJob: --- 10, [125899]
[2026-01-11 16:43:52] 2026-01-11 21:43:19,721 | INFO     | zombie collector waiting for pid 125899
[2026-01-11 16:43:52] 2026-01-11 21:43:19,721 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 16:43:52] 2026-01-11 21:43:19,721 | INFO     | collected zombie processes
[2026-01-11 16:43:52] 2026-01-11 21:43:19,721 | INFO     | will attempt to kill all subprocesses of pid=125899
[2026-01-11 16:43:52] 2026-01-11 21:43:20,055 | INFO     | process IDs to be killed: [125899] (in reverse order)
[2026-01-11 16:43:52] 2026-01-11 21:43:20,165 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 16:43:52] 2026-01-11 21:43:20,166 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 16:43:52] 2026-01-11 21:43:20,178 | INFO     | did not find any defunct processes belonging to 125899
[2026-01-11 16:43:52] 2026-01-11 21:43:20,190 | INFO     | did not find any defunct processes belonging to 125899
[2026-01-11 16:43:52] 2026-01-11 21:43:20,191 | INFO     | ready for new job
[2026-01-11 16:43:52] 2026-01-11 21:43:20,191 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 16:43:52] 2026-01-11 21:43:20,194 | INFO     | ***************************************
[2026-01-11 16:43:52] 2026-01-11 21:43:20,194 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 16:43:52] 2026-01-11 21:43:20,194 | INFO     | ***************************************
[2026-01-11 16:43:52] 2026-01-11 21:43:20,194 | INFO     | 
[2026-01-11 16:43:52] 2026-01-11 21:43:20,196 | INFO     | architecture information:
[2026-01-11 16:43:52] 2026-01-11 21:43:20,197 | INFO     | executing command: cat /etc/os-release
[2026-01-11 16:43:52] 2026-01-11 21:43:20,208 | INFO     | cat /etc/os-release:
[2026-01-11 16:43:52] NAME="CentOS Linux"
[2026-01-11 16:43:52] VERSION="7 (Core)"
[2026-01-11 16:43:52] ID="centos"
[2026-01-11 16:43:52] ID_LIKE="rhel fedora"
[2026-01-11 16:43:52] VERSION_ID="7"
[2026-01-11 16:43:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 16:43:52] ANSI_COLOR="0;31"
[2026-01-11 16:43:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 16:43:52] HOME_URL="https://www.centos.org/"
[2026-01-11 16:43:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 16:43:52] 
[2026-01-11 16:43:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 16:43:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 16:43:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 16:43:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 16:43:52] 
[2026-01-11 16:43:52] 2026-01-11 21:43:20,209 | INFO     | ***************************************
[2026-01-11 16:43:52] 2026-01-11 21:43:20,711 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 16:43:52] 2026-01-11 21:43:20,727 | INFO     | sufficient remaining disk space (96539246592 B)
[2026-01-11 16:43:52] 2026-01-11 21:43:20,728 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 16:43:52] 2026-01-11 21:43:20,728 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 16:43:52] 2026-01-11 21:43:20,728 | INFO     | update_server=False
[2026-01-11 16:43:52] 2026-01-11 21:43:20,728 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 16:43:52] 2026-01-11 21:43:20,728 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 16:43:52] 2026-01-11 21:43:20,866 | INFO     | all payload control threads have been joined
[2026-01-11 16:43:52] 2026-01-11 21:43:21,269 | INFO     | all data control threads have been joined
[2026-01-11 16:43:52] 2026-01-11 21:43:21,277 | INFO     | all job control threads have been joined
[2026-01-11 16:43:52] 2026-01-11 21:43:21,605 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 16:43:52] 2026-01-11 21:43:21,605 | INFO     | aborting loop
[2026-01-11 16:43:52] 2026-01-11 21:43:21,733 | INFO     | [job] retrieve thread has finished
[2026-01-11 16:43:52] 2026-01-11 21:43:21,734 | INFO     | [payload] failed_post thread has finished
[2026-01-11 16:43:52] 2026-01-11 21:43:21,737 | INFO     | [monitor] cgroup control has ended
[2026-01-11 16:43:52] 2026-01-11 21:43:21,750 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 16:43:52] 2026-01-11 21:43:21,778 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 16:43:52] 2026-01-11 21:43:21,871 | INFO     | [payload] control thread has finished
[2026-01-11 16:43:52] 2026-01-11 21:43:21,999 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 16:43:52] 2026-01-11 21:43:22,071 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 16:43:52] 2026-01-11 21:43:22,235 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 16:43:52] 2026-01-11 21:43:22,274 | INFO     | [data] control thread has finished
[2026-01-11 16:43:52] 2026-01-11 21:43:22,283 | INFO     | [job] control thread has finished
[2026-01-11 16:43:52] 2026-01-11 21:43:22,610 | INFO     | [job] job monitor thread has finished
[2026-01-11 16:43:52] 2026-01-11 21:43:22,666 | INFO     | [payload] validate_post thread has finished
[2026-01-11 16:43:52] 2026-01-11 21:43:22,744 | INFO     | [job] validate thread has finished
[2026-01-11 16:43:52] 2026-01-11 21:43:23,065 | INFO     | [data] copytool_in thread has finished
[2026-01-11 16:43:52] 2026-01-11 21:43:23,578 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 16:43:52] 2026-01-11 21:43:23,784 | INFO     | [data] copytool_out thread has finished
[2026-01-11 16:43:52] 2026-01-11 21:43:24,583 | INFO     | [job] queue monitor thread has finished
[2026-01-11 16:43:52] 2026-01-11 21:43:24,737 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 16:43:52] 2026-01-11 21:43:25,187 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140495418251072)>', '<ExcThread(monitor, started 140494529087232)>']
[2026-01-11 16:43:52] 2026-01-11 21:43:30,212 | INFO     | all workflow threads have been joined
[2026-01-11 16:43:52] 2026-01-11 21:43:30,212 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 16:43:52] 2026-01-11 21:43:30,212 | INFO     | traces error code: 0
[2026-01-11 16:43:52] 2026-01-11 21:43:30,213 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 16:43:52] 2026-01-11 21:43:52,137 | INFO     | PID=112648 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 16:43:52] 2026-01-11 21:43:52,138 | INFO     | .. there are 19 such processes running
[2026-01-11 16:43:52] 2026-01-11 21:43:52,139 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 16:43:52] 2026-01-11 21:43:52,139 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 16:43:52] 2026-01-11 21:43:52,140 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 16:43:52] 2026-01-11 21:43:52,140 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 16:43:52] 2026-01-11 21:43:52,140 | CRITICAL | thread 'MainThread' is not alive
[2026-01-11 16:43:52] 2026-01-11 21:43:52,140 | INFO     | [monitor] control thread has ended
[2026-01-11 16:43:52] 2026-01-11 21:43:52,325 [wrapper] ==== pilot stdout END ====
[2026-01-11 16:43:52] 2026-01-11 21:43:52,328 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 16:43:52] 2026-01-11 21:43:52,331 [wrapper] pilotpid: 112648
[2026-01-11 16:43:52] 2026-01-11 21:43:52,333 [wrapper] Pilot exit status: 0
[2026-01-11 16:43:52] 2026-01-11 21:43:52,404 [wrapper] pandaids: 6966194494
[2026-01-11 16:43:52] 2026-01-11 21:43:52,513 [wrapper] cleanup supervisor_pilot 1324295 112649
[2026-01-11 16:43:52] 2026-01-11 21:43:52,516 [wrapper] Test setup, not cleaning
[2026-01-11 16:43:52] 2026-01-11 21:43:52,519 [wrapper] apfmon messages muted
[2026-01-11 16:43:52] 2026-01-11 21:43:52,522 [wrapper] ==== wrapper stdout END ====
[2026-01-11 16:43:52] 2026-01-11 21:43:52,525 [wrapper] ==== wrapper stderr END ====
[2026-01-11 16:43:52]  *** Error codes and diagnostics ***
[2026-01-11 16:43:52]     "exeErrorCode": 0,
[2026-01-11 16:43:52]     "exeErrorDiag": "",
[2026-01-11 16:43:52]     "pilotErrorCode": 0,
[2026-01-11 16:43:52]     "pilotErrorDiag": "",
[2026-01-11 16:43:52]  *** Listing of results directory ***
[2026-01-11 16:43:52] total 446356
[2026-01-11 16:43:52] -rw-r--r--. 1 boincer umatlas    579449 Jan 11 07:18 pilot3.tar.gz
[2026-01-11 16:43:52] -rwx------. 1 boincer umatlas     36322 Jan 11 07:54 runpilot2-wrapper.sh
[2026-01-11 16:43:52] -rw-r--r--. 1 boincer umatlas      5112 Jan 11 07:54 queuedata.json
[2026-01-11 16:43:52] -rw-r--r--. 1 boincer umatlas       100 Jan 11 07:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 16:43:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 07:54 run_atlas
[2026-01-11 16:43:52] -rw-r--r--. 1 boincer umatlas       105 Jan 11 07:54 job.xml
[2026-01-11 16:43:52] -rw-r--r--. 2 boincer umatlas 223304562 Jan 11 07:54 EVNT.47898824._001446.pool.root.1
[2026-01-11 16:43:52] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 07:54 start_atlas.sh
[2026-01-11 16:43:52] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 07:54 shared
[2026-01-11 16:43:52] -rw-r--r--. 2 boincer umatlas    592403 Jan 11 07:54 input.tar.gz
[2026-01-11 16:43:52] -rw-r--r--. 1 boincer umatlas         0 Jan 11 07:54 boinc_lockfile
[2026-01-11 16:43:52] -rw-r--r--. 1 boincer umatlas      2517 Jan 11 07:54 pandaJob.out
[2026-01-11 16:43:52] -rw-------. 1 boincer umatlas        57 Jan 11 07:54 setup.sh.local
[2026-01-11 16:43:52] -rw-------. 1 boincer umatlas    989548 Jan 11 07:55 agis_schedconf.cvmfs.json
[2026-01-11 16:43:52] drwx------. 5 boincer umatlas      4096 Jan 11 07:55 pilot3
[2026-01-11 16:43:52] -rw-r--r--. 1 boincer umatlas      6661 Jan 11 16:37 init_data.xml
[2026-01-11 16:43:52] -rw-------. 1 boincer umatlas 220917182 Jan 11 16:42 HITS.47898826._040806.pool.root.1
[2026-01-11 16:43:52] -rw-r--r--. 1 boincer umatlas       531 Jan 11 16:42 boinc_task_state.xml
[2026-01-11 16:43:52] -rw-------. 1 boincer umatlas      1042 Jan 11 16:43 memory_monitor_summary.json
[2026-01-11 16:43:52] -rw-------. 1 boincer umatlas   1516240 Jan 11 16:43 agis_ddmendpoints.agis.ALL.json
[2026-01-11 16:43:52] -rw-------. 1 boincer umatlas    699473 Jan 11 16:43 log.47898826._040806.job.log.tgz.1
[2026-01-11 16:43:52] -rw-------. 1 boincer umatlas      7819 Jan 11 16:43 heartbeat.json
[2026-01-11 16:43:52] -rw-r--r--. 1 boincer umatlas        28 Jan 11 16:43 wrapper_checkpoint.txt
[2026-01-11 16:43:52] -rw-------. 1 boincer umatlas        95 Jan 11 16:43 pilot_heartbeat.json
[2026-01-11 16:43:52] -rw-------. 1 boincer umatlas       892 Jan 11 16:43 pilotlog.txt
[2026-01-11 16:43:52] -rw-------. 1 boincer umatlas   3770688 Jan 11 16:43 log.47898826._040806.job.log.1
[2026-01-11 16:43:52] -rw-------. 1 boincer umatlas       357 Jan 11 16:43 output.list
[2026-01-11 16:43:52] -rw-r--r--. 1 boincer umatlas       620 Jan 11 16:43 runtime_log
[2026-01-11 16:43:52] -rw-------. 1 boincer umatlas   4485120 Jan 11 16:43 result.tar.gz
[2026-01-11 16:43:52] -rw-r--r--. 1 boincer umatlas      9335 Jan 11 16:43 runtime_log.err
[2026-01-11 16:43:52] -rw-------. 1 boincer umatlas       658 Jan 11 16:43 1bANDmb89y8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTjhKDmisA9Ln.diag
[2026-01-11 16:43:52] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 16:43 boinc_mmap_file
[2026-01-11 16:43:52] -rw-r--r--. 1 boincer umatlas     21514 Jan 11 16:43 stderr.txt
[2026-01-11 16:43:52] HITS file was successfully produced:
[2026-01-11 16:43:52] -rw-------. 1 boincer umatlas 220917182 Jan 11 16:42 shared/HITS.pool.root.1
[2026-01-11 16:43:52]  *** Contents of shared directory: ***
[2026-01-11 16:43:52] total 438796
[2026-01-11 16:43:52] -rw-r--r--. 2 boincer umatlas 223304562 Jan 11 07:54 ATLAS.root_0
[2026-01-11 16:43:52] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 07:54 start_atlas.sh
[2026-01-11 16:43:52] -rw-r--r--. 2 boincer umatlas    592403 Jan 11 07:54 input.tar.gz
[2026-01-11 16:43:52] -rw-------. 1 boincer umatlas 220917182 Jan 11 16:42 HITS.pool.root.1
[2026-01-11 16:43:52] -rw-------. 1 boincer umatlas   4485120 Jan 11 16:43 result.tar.gz
16:43:54 (108147): run_atlas exited; CPU time 71830.887262
16:43:54 (108147): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN