Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:37:11 (437242): wrapper (7.7.26015): starting
07:37:11 (437242): wrapper: running run_atlas (--nthreads 11)
[2026-01-11 07:37:11] Arguments: --nthreads 11
[2026-01-11 07:37:11] Threads: 11
[2026-01-11 07:37:11] Checking for CVMFS
[2026-01-11 07:37:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 07:37:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 07:37:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 07:37:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 07:37:12] 2.13.3.0 12497 96164 251396 155017 2 534 19828858 32935937 24686 16776704 0 498179168 99.477 688858468 37914 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-11 07:37:12] CVMFS is ok
[2026-01-11 07:37:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 07:37:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 07:37:12] Further information can be found at the LHC@home message board.
[2026-01-11 07:37:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 07:37:12] Checking for apptainer binary...
[2026-01-11 07:37:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 07:37:12] Running /usr/bin/apptainer --version
[2026-01-11 07:37:12] apptainer version 1.4.5-2.el9
[2026-01-11 07:37:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 07:37:12] c7-7-35.aglt2.org
[2026-01-11 07:37:12] apptainer works
[2026-01-11 07:37:12] Set ATHENA_PROC_NUMBER=11
[2026-01-11 07:37:12] Set ATHENA_CORE_NUMBER=11
[2026-01-11 07:37:12] Starting ATLAS job with PandaID=6966188660
[2026-01-11 07:37:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 08:17:36]  *** The last 200 lines of the pilot log: ***
[2026-01-11 08:17:36]  protocol_id=None
[2026-01-11 08:17:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-11 08:17:36]  replicas=None
[2026-01-11 08:17:36]  scope=mc16_13TeV
[2026-01-11 08:17:36]  status=None
[2026-01-11 08:17:36]  status_code=0
[2026-01-11 08:17:36]  storage_token=
[2026-01-11 08:17:36]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6966188660/log.47962010._003079.job.log.tgz.1
[2026-01-11 08:17:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/e5/9d/log.47962010._003079.job.log.tgz.1
[2026-01-11 08:17:36]  workdir=None
[2026-01-11 08:17:36] ]
[2026-01-11 08:17:36] 2026-01-11 13:16:52,491 | INFO     | transferring file log.47962010._003079.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6966188660/log.47962010._003079.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-11 08:17:36] 2026-01-11 13:16:52,492 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6966188660/log.47962010._003079.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._003079.job
[2026-01-11 08:17:36] 2026-01-11 13:16:52,509 | INFO     | adding to output.list: log.47962010._003079.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/e5/9d/log.47962010._003079.job.log.tgz.
[2026-01-11 08:17:36] 2026-01-11 13:16:52,509 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 08:17:36] 2026-01-11 13:16:52,510 | INFO     | summary of transferred files:
[2026-01-11 08:17:36] 2026-01-11 13:16:52,510 | INFO     |  -- lfn=log.47962010._003079.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 08:17:36] 2026-01-11 13:16:52,510 | INFO     | stage-out finished correctly
[2026-01-11 08:17:36] 2026-01-11 13:16:53,759 | INFO     | time since job start (2367s) is within the limit (349056.0s)
[2026-01-11 08:17:36] 2026-01-11 13:16:55,669 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 08:17:36] 2026-01-11 13:16:55,731 | INFO     | job 6966188660 has state=finished
[2026-01-11 08:17:36] 2026-01-11 13:16:55,731 | INFO     | preparing for final server update for job 6966188660 in state='finished'
[2026-01-11 08:17:36] 2026-01-11 13:16:55,732 | INFO     | this job has now completed (state=finished)
[2026-01-11 08:17:36] 2026-01-11 13:16:55,732 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 08:17:36] 2026-01-11 13:16:55,732 | INFO     | log transfer has been attempted: DONE
[2026-01-11 08:17:36] 2026-01-11 13:16:55,732 | INFO     | job 6966188660 has finished - writing final server update
[2026-01-11 08:17:36] 2026-01-11 13:16:55,732 | INFO     | total number of processed events: 50 (read)
[2026-01-11 08:17:36] 2026-01-11 13:16:55,734 | INFO     | executing command: lscpu
[2026-01-11 08:17:36] 2026-01-11 13:16:55,765 | INFO     | time since job start (2369s) is within the limit (349056.0s)
[2026-01-11 08:17:36] 2026-01-11 13:16:55,781 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 08:17:36] 2026-01-11 13:16:56,110 | WARNING  | process 448073 can no longer be monitored (due to stat problems) - aborting
[2026-01-11 08:17:36] 2026-01-11 13:16:56,110 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966188660/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 08:17:36] 2026-01-11 13:16:56,475 | INFO     | number of running child processes to parent process 448073: 1
[2026-01-11 08:17:36] 2026-01-11 13:16:56,475 | INFO     | maximum number of monitored processes: 16
[2026-01-11 08:17:36] 2026-01-11 13:16:57,771 | INFO     | time since job start (2371s) is within the limit (349056.0s)
[2026-01-11 08:17:36] 2026-01-11 13:16:58,978 | INFO     | monitor loop #174: job 0:6966188660 is in state 'finished'
[2026-01-11 08:17:36] 2026-01-11 13:16:58,978 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 08:17:36] 2026-01-11 13:16:59,288 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 08:17:36] 2026-01-11 13:16:59,294 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3121.6959270833336
[2026-01-11 08:17:36] 2026-01-11 13:16:59,304 | INFO     | PID=440998 has CPU usage=12.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 08:17:36] 2026-01-11 13:16:59,304 | INFO     | .. there are 20 such processes running
[2026-01-11 08:17:36] 2026-01-11 13:16:59,308 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966188660/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 08:17:36] 2026-01-11 13:16:59,309 | INFO     | extracted standard info from prmon json
[2026-01-11 08:17:36] 2026-01-11 13:16:59,309 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 08:17:36] 2026-01-11 13:16:59,309 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 08:17:36] 2026-01-11 13:16:59,310 | INFO     | fitting pss+swap vs Time
[2026-01-11 08:17:36] 2026-01-11 13:16:59,310 | INFO     | sum of square deviations: 10145526.875
[2026-01-11 08:17:36] 2026-01-11 13:16:59,310 | INFO     | sum of deviations: -466219820.6875
[2026-01-11 08:17:36] 2026-01-11 13:16:59,310 | INFO     | mean x: 1768136328.3125
[2026-01-11 08:17:36] 2026-01-11 13:16:59,311 | INFO     | mean y: 2997045.46875
[2026-01-11 08:17:36] 2026-01-11 13:16:59,311 | INFO     | intersect: 81254588223.86267
[2026-01-11 08:17:36] 2026-01-11 13:16:59,311 | INFO     | chi2: 0.2767540660416201
[2026-01-11 08:17:36] 2026-01-11 13:16:59,311 | INFO     | current memory leak: -45.95 B/s (using 32 data points, chi2=0.28)
[2026-01-11 08:17:36] 2026-01-11 13:16:59,311 | INFO     | could have reported an average CPU frequency of 3114 MHz (5 samples)
[2026-01-11 08:17:36] 2026-01-11 13:16:59,311 | INFO     | ..............................
[2026-01-11 08:17:36] 2026-01-11 13:16:59,311 | INFO     | . Timing measurements:
[2026-01-11 08:17:36] 2026-01-11 13:16:59,311 | INFO     | . get job = 0 s
[2026-01-11 08:17:36] 2026-01-11 13:16:59,311 | INFO     | . initial setup = 2 s
[2026-01-11 08:17:36] 2026-01-11 13:16:59,311 | INFO     | . payload setup = 8 s
[2026-01-11 08:17:36] 2026-01-11 13:16:59,311 | INFO     | . stage-in = 0 s
[2026-01-11 08:17:36] 2026-01-11 13:16:59,311 | INFO     | . payload execution = 2337 s
[2026-01-11 08:17:36] 2026-01-11 13:16:59,311 | INFO     | . stage-out = 0 s
[2026-01-11 08:17:36] 2026-01-11 13:16:59,312 | INFO     | . log creation = 0 s
[2026-01-11 08:17:36] 2026-01-11 13:16:59,312 | INFO     | ..............................
[2026-01-11 08:17:36] 2026-01-11 13:16:59,807 | INFO     | 
[2026-01-11 08:17:36] 2026-01-11 13:16:59,808 | INFO     | job summary report
[2026-01-11 08:17:36] 2026-01-11 13:16:59,808 | INFO     | --------------------------------------------------
[2026-01-11 08:17:36] 2026-01-11 13:16:59,808 | INFO     | PanDA job id: 6966188660
[2026-01-11 08:17:36] 2026-01-11 13:16:59,808 | INFO     | task id: 47962010
[2026-01-11 08:17:36] 2026-01-11 13:16:59,808 | INFO     | errors: (none)
[2026-01-11 08:17:36] 2026-01-11 13:16:59,808 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 08:17:36] 2026-01-11 13:16:59,808 | INFO     | pilot state: finished 
[2026-01-11 08:17:36] 2026-01-11 13:16:59,808 | INFO     | transexitcode: 0
[2026-01-11 08:17:36] 2026-01-11 13:16:59,809 | INFO     | exeerrorcode: 0
[2026-01-11 08:17:36] 2026-01-11 13:16:59,809 | INFO     | exeerrordiag: 
[2026-01-11 08:17:36] 2026-01-11 13:16:59,809 | INFO     | exitcode: 0
[2026-01-11 08:17:36] 2026-01-11 13:16:59,809 | INFO     | exitmsg: OK
[2026-01-11 08:17:36] 2026-01-11 13:16:59,809 | INFO     | cpuconsumptiontime: 11526 s
[2026-01-11 08:17:36] 2026-01-11 13:16:59,809 | INFO     | nevents: 50
[2026-01-11 08:17:36] 2026-01-11 13:16:59,809 | INFO     | neventsw: 0
[2026-01-11 08:17:36] 2026-01-11 13:16:59,809 | INFO     | pid: 448073
[2026-01-11 08:17:36] 2026-01-11 13:16:59,809 | INFO     | pgrp: 448073
[2026-01-11 08:17:36] 2026-01-11 13:16:59,809 | INFO     | corecount: 11
[2026-01-11 08:17:36] 2026-01-11 13:16:59,809 | INFO     | event service: False
[2026-01-11 08:17:36] 2026-01-11 13:16:59,809 | INFO     | sizes: {0: 2283789, 1: 2284645, 6: 2284907, 12: 2284935, 2350: 2319695, 2354: 2319695, 2357: 2320101}
[2026-01-11 08:17:36] 2026-01-11 13:16:59,809 | INFO     | --------------------------------------------------
[2026-01-11 08:17:36] 2026-01-11 13:16:59,809 | INFO     | 
[2026-01-11 08:17:36] 2026-01-11 13:16:59,809 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 08:17:36] 2026-01-11 13:16:59,832 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 08:17:36] 2026-01-11 13:16:59,833 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 08:17:36] 2026-01-11 13:16:59,833 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 08:17:36] 2026-01-11 13:16:59,833 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 08:17:36] 2026-01-11 13:16:59,833 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 08:17:36] 2026-01-11 13:16:59,833 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 08:17:36] 2026-01-11 13:16:59,833 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 08:17:36] 2026-01-11 13:16:59,833 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 08:17:36] 2026-01-11 13:16:59,833 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 08:17:36] 2026-01-11 13:16:59,833 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 08:17:36] 2026-01-11 13:16:59,833 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 08:17:36] 2026-01-11 13:16:59,833 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 08:17:36] 2026-01-11 13:16:59,834 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 08:17:36] 2026-01-11 13:16:59,834 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 08:17:36] 2026-01-11 13:16:59,834 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 08:17:36] 2026-01-11 13:16:59,834 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 08:17:36] 2026-01-11 13:16:59,834 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 08:17:36] 2026-01-11 13:16:59,834 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 08:17:36] 2026-01-11 13:16:59,834 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 08:17:36] 2026-01-11 13:16:59,834 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 08:17:36] 2026-01-11 13:16:59,834 | INFO     | job 6966188660 has completed (purged errors)
[2026-01-11 08:17:36] 2026-01-11 13:16:59,834 | INFO     | overall cleanup function is called
[2026-01-11 08:17:36] 2026-01-11 13:17:00,849 | INFO     | --- collectZombieJob: --- 10, [448073]
[2026-01-11 08:17:36] 2026-01-11 13:17:00,849 | INFO     | zombie collector waiting for pid 448073
[2026-01-11 08:17:36] 2026-01-11 13:17:00,849 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 08:17:36] 2026-01-11 13:17:00,849 | INFO     | collected zombie processes
[2026-01-11 08:17:36] 2026-01-11 13:17:00,849 | INFO     | will attempt to kill all subprocesses of pid=448073
[2026-01-11 08:17:36] 2026-01-11 13:17:01,238 | INFO     | process IDs to be killed: [448073] (in reverse order)
[2026-01-11 08:17:36] 2026-01-11 13:17:01,353 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 08:17:36] 2026-01-11 13:17:01,353 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 08:17:36] 2026-01-11 13:17:01,367 | INFO     | did not find any defunct processes belonging to 448073
[2026-01-11 08:17:36] 2026-01-11 13:17:01,379 | INFO     | did not find any defunct processes belonging to 448073
[2026-01-11 08:17:36] 2026-01-11 13:17:01,379 | INFO     | ready for new job
[2026-01-11 08:17:36] 2026-01-11 13:17:01,379 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 08:17:36] 2026-01-11 13:17:01,381 | INFO     | ***************************************
[2026-01-11 08:17:36] 2026-01-11 13:17:01,381 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 08:17:36] 2026-01-11 13:17:01,381 | INFO     | ***************************************
[2026-01-11 08:17:36] 2026-01-11 13:17:01,381 | INFO     | 
[2026-01-11 08:17:36] 2026-01-11 13:17:01,386 | INFO     | architecture information:
[2026-01-11 08:17:36] 2026-01-11 13:17:01,386 | INFO     | executing command: cat /etc/os-release
[2026-01-11 08:17:36] 2026-01-11 13:17:01,398 | INFO     | cat /etc/os-release:
[2026-01-11 08:17:36] NAME="CentOS Linux"
[2026-01-11 08:17:36] VERSION="7 (Core)"
[2026-01-11 08:17:36] ID="centos"
[2026-01-11 08:17:36] ID_LIKE="rhel fedora"
[2026-01-11 08:17:36] VERSION_ID="7"
[2026-01-11 08:17:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 08:17:36] ANSI_COLOR="0;31"
[2026-01-11 08:17:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 08:17:36] HOME_URL="https://www.centos.org/"
[2026-01-11 08:17:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 08:17:36] 
[2026-01-11 08:17:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 08:17:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 08:17:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 08:17:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 08:17:36] 
[2026-01-11 08:17:36] 2026-01-11 13:17:01,398 | INFO     | ***************************************
[2026-01-11 08:17:36] 2026-01-11 13:17:01,900 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 08:17:36] 2026-01-11 13:17:01,914 | INFO     | sufficient remaining disk space (76380372992 B)
[2026-01-11 08:17:36] 2026-01-11 13:17:01,914 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 08:17:36] 2026-01-11 13:17:01,914 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 08:17:36] 2026-01-11 13:17:01,914 | INFO     | update_server=False
[2026-01-11 08:17:36] 2026-01-11 13:17:01,914 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 08:17:36] 2026-01-11 13:17:01,914 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 08:17:36] 2026-01-11 13:17:02,100 | INFO     | all job control threads have been joined
[2026-01-11 08:17:36] 2026-01-11 13:17:02,488 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 08:17:36] 2026-01-11 13:17:02,491 | INFO     | aborting loop
[2026-01-11 08:17:36] 2026-01-11 13:17:02,499 | INFO     | all data control threads have been joined
[2026-01-11 08:17:36] 2026-01-11 13:17:02,559 | INFO     | all payload control threads have been joined
[2026-01-11 08:17:36] 2026-01-11 13:17:02,919 | INFO     | [job] retrieve thread has finished
[2026-01-11 08:17:36] 2026-01-11 13:17:02,986 | INFO     | [job] validate thread has finished
[2026-01-11 08:17:36] 2026-01-11 13:17:03,090 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 08:17:36] 2026-01-11 13:17:03,105 | INFO     | [job] control thread has finished
[2026-01-11 08:17:36] 2026-01-11 13:17:03,145 | INFO     | [data] copytool_in thread has finished
[2026-01-11 08:17:36] 2026-01-11 13:17:03,187 | INFO     | [payload] failed_post thread has finished
[2026-01-11 08:17:36] 2026-01-11 13:17:03,265 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 08:17:36] 2026-01-11 13:17:03,497 | INFO     | [job] job monitor thread has finished
[2026-01-11 08:17:36] 2026-01-11 13:17:03,504 | INFO     | [data] control thread has finished
[2026-01-11 08:17:36] 2026-01-11 13:17:03,567 | INFO     | [payload] control thread has finished
[2026-01-11 08:17:36] 2026-01-11 13:17:04,040 | INFO     | [payload] validate_post thread has finished
[2026-01-11 08:17:36] 2026-01-11 13:17:04,049 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 08:17:36] 2026-01-11 13:17:04,347 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 08:17:36] 2026-01-11 13:17:04,392 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 08:17:36] 2026-01-11 13:17:05,095 | INFO     | [data] copytool_out thread has finished
[2026-01-11 08:17:36] 2026-01-11 13:17:05,398 | INFO     | [job] queue monitor thread has finished
[2026-01-11 08:17:36] 2026-01-11 13:17:05,920 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 08:17:36] 2026-01-11 13:17:12,016 | INFO     | job.realtimelogging is not enabled
[2026-01-11 08:17:36] 2026-01-11 13:17:13,021 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 08:17:36] 2026-01-11 13:17:29,845 | INFO     | [monitor] cgroup control has ended
[2026-01-11 08:17:36] 2026-01-11 13:17:31,119 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140543910958912)>', '<ExcThread(monitor, started 140543057188608)>']
[2026-01-11 08:17:36] 2026-01-11 13:17:31,899 | INFO     | PID=440998 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 08:17:36] 2026-01-11 13:17:31,899 | INFO     | .. there are 20 such processes running
[2026-01-11 08:17:36] 2026-01-11 13:17:31,900 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 08:17:36] 2026-01-11 13:17:31,900 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 08:17:36] 2026-01-11 13:17:31,900 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 08:17:36] 2026-01-11 13:17:31,900 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 08:17:36] 2026-01-11 13:17:31,901 | INFO     | [monitor] control thread has ended
[2026-01-11 08:17:36] 2026-01-11 13:17:36,144 | INFO     | all workflow threads have been joined
[2026-01-11 08:17:36] 2026-01-11 13:17:36,144 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 08:17:36] 2026-01-11 13:17:36,144 | INFO     | traces error code: 0
[2026-01-11 08:17:36] 2026-01-11 13:17:36,145 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 08:17:36] 2026-01-11 13:17:36,253 [wrapper] ==== pilot stdout END ====
[2026-01-11 08:17:36] 2026-01-11 13:17:36,255 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 08:17:36] 2026-01-11 13:17:36,256 [wrapper] pilotpid: 440998
[2026-01-11 08:17:36] 2026-01-11 13:17:36,258 [wrapper] Pilot exit status: 0
[2026-01-11 08:17:36] 2026-01-11 13:17:36,266 [wrapper] pandaids: 6966188660
[2026-01-11 08:17:36] 2026-01-11 13:17:36,354 [wrapper] cleanup supervisor_pilot  522259 440999
[2026-01-11 08:17:36] 2026-01-11 13:17:36,356 [wrapper] Test setup, not cleaning
[2026-01-11 08:17:36] 2026-01-11 13:17:36,360 [wrapper] apfmon messages muted
[2026-01-11 08:17:36] 2026-01-11 13:17:36,363 [wrapper] ==== wrapper stdout END ====
[2026-01-11 08:17:36] 2026-01-11 13:17:36,365 [wrapper] ==== wrapper stderr END ====
[2026-01-11 08:17:36]  *** Error codes and diagnostics ***
[2026-01-11 08:17:36]     "exeErrorCode": 0,
[2026-01-11 08:17:36]     "exeErrorDiag": "",
[2026-01-11 08:17:36]     "pilotErrorCode": 0,
[2026-01-11 08:17:36]     "pilotErrorDiag": "",
[2026-01-11 08:17:36]  *** Listing of results directory ***
[2026-01-11 08:17:36] total 436156
[2026-01-11 08:17:36] -rw-r--r--. 1 boincer umatlas    579449 Jan 11 07:18 pilot3.tar.gz
[2026-01-11 08:17:36] -rw-r--r--. 1 boincer umatlas      5112 Jan 11 07:33 queuedata.json
[2026-01-11 08:17:36] -rwx------. 1 boincer umatlas     36322 Jan 11 07:36 runpilot2-wrapper.sh
[2026-01-11 08:17:36] -rw-r--r--. 1 boincer umatlas       100 Jan 11 07:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 08:17:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 07:37 run_atlas
[2026-01-11 08:17:36] -rw-r--r--. 1 boincer umatlas       105 Jan 11 07:37 job.xml
[2026-01-11 08:17:36] -rw-r--r--. 2 boincer umatlas 392786761 Jan 11 07:37 EVNT.47962006._000039.pool.root.1
[2026-01-11 08:17:36] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 07:37 start_atlas.sh
[2026-01-11 08:17:36] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 07:37 shared
[2026-01-11 08:17:36] -rw-r--r--. 2 boincer umatlas    592620 Jan 11 07:37 input.tar.gz
[2026-01-11 08:17:36] -rw-r--r--. 1 boincer umatlas         0 Jan 11 07:37 boinc_lockfile
[2026-01-11 08:17:36] -rw-r--r--. 1 boincer umatlas      2888 Jan 11 07:37 pandaJob.out
[2026-01-11 08:17:36] -rw-------. 1 boincer umatlas        57 Jan 11 07:37 setup.sh.local
[2026-01-11 08:17:36] -rw-------. 1 boincer umatlas    989548 Jan 11 07:37 agis_schedconf.cvmfs.json
[2026-01-11 08:17:36] -rw-------. 1 boincer umatlas   1516240 Jan 11 07:37 agis_ddmendpoints.agis.ALL.json
[2026-01-11 08:17:36] drwx------. 5 boincer umatlas      4096 Jan 11 07:37 pilot3
[2026-01-11 08:17:36] -rw-r--r--. 1 boincer umatlas      6944 Jan 11 08:09 init_data.xml
[2026-01-11 08:17:36] -rw-r--r--. 1 boincer umatlas       529 Jan 11 08:10 boinc_task_state.xml
[2026-01-11 08:17:36] -rw-------. 1 boincer umatlas  46204253 Jan 11 08:16 HITS.47962010._003079.pool.root.1
[2026-01-11 08:17:36] -rw-------. 1 boincer umatlas      1029 Jan 11 08:16 memory_monitor_summary.json
[2026-01-11 08:17:36] -rw-------. 1 boincer umatlas   1471300 Jan 11 08:16 log.47962010._003079.job.log.tgz.1
[2026-01-11 08:17:36] -rw-------. 1 boincer umatlas      8525 Jan 11 08:16 heartbeat.json
[2026-01-11 08:17:36] -rw-------. 1 boincer umatlas        95 Jan 11 08:17 pilot_heartbeat.json
[2026-01-11 08:17:36] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 08:17 boinc_mmap_file
[2026-01-11 08:17:36] -rw-------. 1 boincer umatlas      4895 Jan 11 08:17 pilotlog.txt
[2026-01-11 08:17:36] -rw-------. 1 boincer umatlas    384568 Jan 11 08:17 log.47962010._003079.job.log.1
[2026-01-11 08:17:36] -rw-r--r--. 1 boincer umatlas        27 Jan 11 08:17 wrapper_checkpoint.txt
[2026-01-11 08:17:36] -rw-------. 1 boincer umatlas       353 Jan 11 08:17 output.list
[2026-01-11 08:17:36] -rw-r--r--. 1 boincer umatlas       620 Jan 11 08:17 runtime_log
[2026-01-11 08:17:36] -rw-------. 1 boincer umatlas   1873920 Jan 11 08:17 result.tar.gz
[2026-01-11 08:17:36] -rw-r--r--. 1 boincer umatlas      9339 Jan 11 08:17 runtime_log.err
[2026-01-11 08:17:36] -rw-------. 1 boincer umatlas       652 Jan 11 08:17 fU0MDmXr9y8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmw2mKDmQ6YVZm.diag
[2026-01-11 08:17:36] -rw-r--r--. 1 boincer umatlas     21942 Jan 11 08:17 stderr.txt
[2026-01-11 08:17:36] HITS file was successfully produced:
[2026-01-11 08:17:36] -rw-------. 1 boincer umatlas 46204253 Jan 11 08:16 shared/HITS.pool.root.1
[2026-01-11 08:17:36]  *** Contents of shared directory: ***
[2026-01-11 08:17:36] total 431140
[2026-01-11 08:17:36] -rw-r--r--. 2 boincer umatlas 392786761 Jan 11 07:37 ATLAS.root_0
[2026-01-11 08:17:36] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 07:37 start_atlas.sh
[2026-01-11 08:17:36] -rw-r--r--. 2 boincer umatlas    592620 Jan 11 07:37 input.tar.gz
[2026-01-11 08:17:36] -rw-------. 1 boincer umatlas  46204253 Jan 11 08:16 HITS.pool.root.1
[2026-01-11 08:17:36] -rw-------. 1 boincer umatlas   1873920 Jan 11 08:17 result.tar.gz
08:17:38 (437242): run_atlas exited; CPU time 11453.085821
08:17:38 (437242): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN