Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:19:23 (630234): wrapper (7.7.26015): starting
07:19:23 (630234): wrapper: running run_atlas (--nthreads 8)
[2026-01-11 07:19:23] Arguments: --nthreads 8
[2026-01-11 07:19:23] Threads: 8
[2026-01-11 07:19:23] Checking for CVMFS
[2026-01-11 07:19:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 07:19:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 07:19:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 07:19:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 07:19:24] 2.13.3.0 6723 25779 195888 155017 0 342 23654019 40960001 10190 16776704 0 18686332 99.577 19340504 38593 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-11 07:19:24] CVMFS is ok
[2026-01-11 07:19:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 07:19:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 07:19:24] Further information can be found at the LHC@home message board.
[2026-01-11 07:19:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 07:19:24] Checking for apptainer binary...
[2026-01-11 07:19:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 07:19:24] Running /usr/bin/apptainer --version
[2026-01-11 07:19:24] apptainer version 1.4.5-2.el9
[2026-01-11 07:19:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 07:19:24] c-210-35-2.aglt2.org
[2026-01-11 07:19:24] apptainer works
[2026-01-11 07:19:24] Set ATHENA_PROC_NUMBER=8
[2026-01-11 07:19:24] Set ATHENA_CORE_NUMBER=8
[2026-01-11 07:19:24] Starting ATLAS job with PandaID=6966183119
[2026-01-11 07:19:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 12:21:19]  *** The last 200 lines of the pilot log: ***
[2026-01-11 12:21:19] 2026-01-11 17:20:09,754 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 12:21:19] 2026-01-11 17:20:11,558 | INFO     | time since job start (18030s) is within the limit (349056.0s)
[2026-01-11 12:21:19] 2026-01-11 17:20:12,259 | INFO     | monitor loop #1156: job 0:6966183119 is in state 'finished'
[2026-01-11 12:21:19] 2026-01-11 17:20:12,259 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 12:21:19] 2026-01-11 17:20:13,565 | INFO     | time since job start (18032s) is within the limit (349056.0s)
[2026-01-11 12:21:19] 2026-01-11 17:20:14,764 | INFO     | monitor loop #1157: job 0:6966183119 is in state 'finished'
[2026-01-11 12:21:19] 2026-01-11 17:20:14,768 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 12:21:19] 2026-01-11 17:20:15,572 | INFO     | time since job start (18034s) is within the limit (349056.0s)
[2026-01-11 12:21:19] 2026-01-11 17:20:16,076 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 12:21:19] 2026-01-11 17:20:16,079 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3100.8578214285703
[2026-01-11 12:21:19] 2026-01-11 17:20:16,089 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6966183119/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 12:21:19] 2026-01-11 17:20:16,090 | INFO     | extracted standard info from prmon json
[2026-01-11 12:21:19] 2026-01-11 17:20:16,090 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 12:21:19] 2026-01-11 17:20:16,090 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 12:21:19] 2026-01-11 17:20:16,091 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 12:21:19] 2026-01-11 17:20:16,091 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 12:21:19] 2026-01-11 17:20:16,096 | INFO     | fitting pss+swap vs Time
[2026-01-11 12:21:19] 2026-01-11 17:20:16,096 | INFO     | sum of square deviations: 7959532199.220339
[2026-01-11 12:21:19] 2026-01-11 17:20:16,098 | INFO     | sum of deviations: -8918697797.305061
[2026-01-11 12:21:19] 2026-01-11 17:20:16,099 | INFO     | mean x: 1768142984.542373
[2026-01-11 12:21:19] 2026-01-11 17:20:16,099 | INFO     | mean y: 2569267.4644067795
[2026-01-11 12:21:19] 2026-01-11 17:20:16,099 | INFO     | intersect: 1983782804.4990497
[2026-01-11 12:21:19] 2026-01-11 17:20:16,099 | INFO     | chi2: 2.4621822149057424
[2026-01-11 12:21:19] 2026-01-11 17:20:16,100 | INFO     | sum of square deviations: 7561629350.224153
[2026-01-11 12:21:19] 2026-01-11 17:20:16,102 | INFO     | sum of deviations: -8088689476.034489
[2026-01-11 12:21:19] 2026-01-11 17:20:16,102 | INFO     | mean x: 1768142832.0517242
[2026-01-11 12:21:19] 2026-01-11 17:20:16,102 | INFO     | mean y: 2569586.268965517
[2026-01-11 12:21:19] 2026-01-11 17:20:16,102 | INFO     | intersect: 1893955378.3163683
[2026-01-11 12:21:19] 2026-01-11 17:20:16,102 | INFO     | chi2: 2.46247443473868
[2026-01-11 12:21:19] 2026-01-11 17:20:16,102 | INFO     | current chi2=2.46247443473868 (change=-0.01186832685121873 %)
[2026-01-11 12:21:19] 2026-01-11 17:20:16,102 | INFO     | right removable region: 289
[2026-01-11 12:21:19] 2026-01-11 17:20:16,103 | INFO     | sum of square deviations: 7561549623.324191
[2026-01-11 12:21:19] 2026-01-11 17:20:16,105 | INFO     | sum of deviations: -69847989882.08963
[2026-01-11 12:21:19] 2026-01-11 17:20:16,105 | INFO     | mean x: 1768143137.048276
[2026-01-11 12:21:19] 2026-01-11 17:20:16,105 | INFO     | mean y: 2592504.7206896553
[2026-01-11 12:21:19] 2026-01-11 17:20:16,105 | INFO     | intersect: 16335388042.514288
[2026-01-11 12:21:19] 2026-01-11 17:20:16,105 | INFO     | chi2: 0.5673586271683534
[2026-01-11 12:21:19] 2026-01-11 17:20:16,106 | INFO     | current chi2=0.5673586271683534 (change=76.95708206591554 %)
[2026-01-11 12:21:19] 2026-01-11 17:20:16,106 | INFO     | sum of square deviations: 7177091174.610552
[2026-01-11 12:21:19] 2026-01-11 17:20:16,108 | INFO     | sum of deviations: -82373555418.14737
[2026-01-11 12:21:19] 2026-01-11 17:20:16,108 | INFO     | mean x: 1768143289.5473685
[2026-01-11 12:21:19] 2026-01-11 17:20:16,108 | INFO     | mean y: 2597453.2701754384
[2026-01-11 12:21:19] 2026-01-11 17:20:16,108 | INFO     | intersect: 20296090416.547016
[2026-01-11 12:21:19] 2026-01-11 17:20:16,108 | INFO     | chi2: 0.4539888937107884
[2026-01-11 12:21:19] 2026-01-11 17:20:16,108 | INFO     | current chi2=0.4539888937107884 (change=19.98202336736912 %)
[2026-01-11 12:21:19] 2026-01-11 17:20:16,109 | INFO     | left removable region: 20
[2026-01-11 12:21:19] 2026-01-11 17:20:16,109 | INFO     | sum of square deviations: 6034858478.669146
[2026-01-11 12:21:19] 2026-01-11 17:20:16,111 | INFO     | sum of deviations: -70812645760.60225
[2026-01-11 12:21:19] 2026-01-11 17:20:16,111 | INFO     | mean x: 1768143411.5464685
[2026-01-11 12:21:19] 2026-01-11 17:20:16,111 | INFO     | mean y: 2594294.2081784387
[2026-01-11 12:21:19] 2026-01-11 17:20:16,111 | INFO     | intersect: 20749876686.718307
[2026-01-11 12:21:19] 2026-01-11 17:20:16,111 | INFO     | chi2: 0.4285198371968744
[2026-01-11 12:21:19] 2026-01-11 17:20:16,111 | INFO     | current memory leak: -11.73 B/s (using 269 data points, chi2=0.43)
[2026-01-11 12:21:19] 2026-01-11 17:20:16,112 | INFO     | could have reported an average CPU frequency of 3068 MHz (13 samples)
[2026-01-11 12:21:19] 2026-01-11 17:20:16,112 | INFO     | ..............................
[2026-01-11 12:21:19] 2026-01-11 17:20:16,112 | INFO     | . Timing measurements:
[2026-01-11 12:21:19] 2026-01-11 17:20:16,112 | INFO     | . get job = 1 s
[2026-01-11 12:21:19] 2026-01-11 17:20:16,112 | INFO     | . initial setup = 2 s
[2026-01-11 12:21:19] 2026-01-11 17:20:16,112 | INFO     | . payload setup = 10 s
[2026-01-11 12:21:19] 2026-01-11 17:20:16,113 | INFO     | . stage-in = 0 s
[2026-01-11 12:21:19] 2026-01-11 17:20:16,113 | INFO     | . payload execution = 17982 s
[2026-01-11 12:21:19] 2026-01-11 17:20:16,113 | INFO     | . stage-out = 2 s
[2026-01-11 12:21:19] 2026-01-11 17:20:16,113 | INFO     | . log creation = 0 s
[2026-01-11 12:21:19] 2026-01-11 17:20:16,113 | INFO     | ..............................
[2026-01-11 12:21:19] 2026-01-11 17:20:16,322 | INFO     | 
[2026-01-11 12:21:19] 2026-01-11 17:20:16,322 | INFO     | job summary report
[2026-01-11 12:21:19] 2026-01-11 17:20:16,322 | INFO     | --------------------------------------------------
[2026-01-11 12:21:19] 2026-01-11 17:20:16,322 | INFO     | PanDA job id: 6966183119
[2026-01-11 12:21:19] 2026-01-11 17:20:16,322 | INFO     | task id: 47898826
[2026-01-11 12:21:19] 2026-01-11 17:20:16,322 | INFO     | errors: (none)
[2026-01-11 12:21:19] 2026-01-11 17:20:16,322 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 12:21:19] 2026-01-11 17:20:16,322 | INFO     | pilot state: finished 
[2026-01-11 12:21:19] 2026-01-11 17:20:16,323 | INFO     | transexitcode: 0
[2026-01-11 12:21:19] 2026-01-11 17:20:16,323 | INFO     | exeerrorcode: 0
[2026-01-11 12:21:19] 2026-01-11 17:20:16,323 | INFO     | exeerrordiag: 
[2026-01-11 12:21:19] 2026-01-11 17:20:16,323 | INFO     | exitcode: 0
[2026-01-11 12:21:19] 2026-01-11 17:20:16,323 | INFO     | exitmsg: OK
[2026-01-11 12:21:19] 2026-01-11 17:20:16,323 | INFO     | cpuconsumptiontime: 54518 s
[2026-01-11 12:21:19] 2026-01-11 17:20:16,323 | INFO     | nevents: 400
[2026-01-11 12:21:19] 2026-01-11 17:20:16,323 | INFO     | neventsw: 0
[2026-01-11 12:21:19] 2026-01-11 17:20:16,323 | INFO     | pid: 641682
[2026-01-11 12:21:19] 2026-01-11 17:20:16,323 | INFO     | pgrp: 641682
[2026-01-11 12:21:19] 2026-01-11 17:20:16,323 | INFO     | corecount: 8
[2026-01-11 12:21:19] 2026-01-11 17:20:16,323 | INFO     | event service: False
[2026-01-11 12:21:19] 2026-01-11 17:20:16,323 | INFO     | sizes: {0: 2283090, 1: 2283946, 7: 2284208, 12: 2284236, 17997: 2316554, 18000: 2325552, 18003: 2325736, 18018: 2325930}
[2026-01-11 12:21:19] 2026-01-11 17:20:16,323 | INFO     | --------------------------------------------------
[2026-01-11 12:21:19] 2026-01-11 17:20:16,323 | INFO     | 
[2026-01-11 12:21:19] 2026-01-11 17:20:16,324 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-11 12:21:19] 2026-01-11 17:20:16,369 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 12:21:19] 2026-01-11 17:20:16,369 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 12:21:19] 2026-01-11 17:20:16,369 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 12:21:19] 2026-01-11 17:20:16,370 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 12:21:19] 2026-01-11 17:20:16,370 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 12:21:19] 2026-01-11 17:20:16,370 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 12:21:19] 2026-01-11 17:20:16,370 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 12:21:19] 2026-01-11 17:20:16,370 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 12:21:19] 2026-01-11 17:20:16,370 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 12:21:19] 2026-01-11 17:20:16,370 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 12:21:19] 2026-01-11 17:20:16,370 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 12:21:19] 2026-01-11 17:20:16,370 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 12:21:19] 2026-01-11 17:20:16,370 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 12:21:19] 2026-01-11 17:20:16,370 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 12:21:19] 2026-01-11 17:20:16,370 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 12:21:19] 2026-01-11 17:20:16,370 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 12:21:19] 2026-01-11 17:20:16,370 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 12:21:19] 2026-01-11 17:20:16,370 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 12:21:19] 2026-01-11 17:20:16,371 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 12:21:19] 2026-01-11 17:20:16,371 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 12:21:19] 2026-01-11 17:20:16,371 | INFO     | job 6966183119 has completed (purged errors)
[2026-01-11 12:21:19] 2026-01-11 17:20:16,371 | INFO     | overall cleanup function is called
[2026-01-11 12:21:19] 2026-01-11 17:20:17,385 | INFO     | --- collectZombieJob: --- 10, [641682]
[2026-01-11 12:21:19] 2026-01-11 17:20:17,385 | INFO     | zombie collector waiting for pid 641682
[2026-01-11 12:21:19] 2026-01-11 17:20:17,385 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 12:21:19] 2026-01-11 17:20:17,385 | INFO     | collected zombie processes
[2026-01-11 12:21:19] 2026-01-11 17:20:17,385 | INFO     | will attempt to kill all subprocesses of pid=641682
[2026-01-11 12:21:19] 2026-01-11 17:20:17,718 | INFO     | process IDs to be killed: [641682] (in reverse order)
[2026-01-11 12:21:19] 2026-01-11 17:20:17,986 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 12:21:19] 2026-01-11 17:20:17,987 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 12:21:19] 2026-01-11 17:20:17,995 | INFO     | did not find any defunct processes belonging to 641682
[2026-01-11 12:21:19] 2026-01-11 17:20:18,003 | INFO     | did not find any defunct processes belonging to 641682
[2026-01-11 12:21:19] 2026-01-11 17:20:18,003 | INFO     | ready for new job
[2026-01-11 12:21:19] 2026-01-11 17:20:18,004 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 12:21:19] 2026-01-11 17:20:18,006 | INFO     | ***************************************
[2026-01-11 12:21:19] 2026-01-11 17:20:18,007 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 12:21:19] 2026-01-11 17:20:18,007 | INFO     | ***************************************
[2026-01-11 12:21:19] 2026-01-11 17:20:18,007 | INFO     | 
[2026-01-11 12:21:19] 2026-01-11 17:20:18,010 | INFO     | architecture information:
[2026-01-11 12:21:19] 2026-01-11 17:20:18,010 | INFO     | executing command: cat /etc/os-release
[2026-01-11 12:21:19] 2026-01-11 17:20:18,029 | INFO     | cat /etc/os-release:
[2026-01-11 12:21:19] NAME="CentOS Linux"
[2026-01-11 12:21:19] VERSION="7 (Core)"
[2026-01-11 12:21:19] ID="centos"
[2026-01-11 12:21:19] ID_LIKE="rhel fedora"
[2026-01-11 12:21:19] VERSION_ID="7"
[2026-01-11 12:21:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 12:21:19] ANSI_COLOR="0;31"
[2026-01-11 12:21:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 12:21:19] HOME_URL="https://www.centos.org/"
[2026-01-11 12:21:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 12:21:19] 
[2026-01-11 12:21:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 12:21:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 12:21:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 12:21:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 12:21:19] 
[2026-01-11 12:21:19] 2026-01-11 17:20:18,029 | INFO     | ***************************************
[2026-01-11 12:21:19] 2026-01-11 17:20:18,533 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-11 12:21:19] 2026-01-11 17:20:18,598 | INFO     | sufficient remaining disk space (75457626112 B)
[2026-01-11 12:21:19] 2026-01-11 17:20:18,599 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 12:21:19] 2026-01-11 17:20:18,599 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 12:21:19] 2026-01-11 17:20:18,599 | INFO     | update_server=False
[2026-01-11 12:21:19] 2026-01-11 17:20:18,599 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 12:21:19] 2026-01-11 17:20:18,600 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 12:21:19] 2026-01-11 17:20:18,600 | INFO     | aborting loop
[2026-01-11 12:21:19] 2026-01-11 17:20:18,787 | INFO     | all data control threads have been joined
[2026-01-11 12:21:19] 2026-01-11 17:20:19,382 | INFO     | all payload control threads have been joined
[2026-01-11 12:21:19] 2026-01-11 17:20:19,567 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 12:21:19] 2026-01-11 17:20:19,586 | INFO     | all job control threads have been joined
[2026-01-11 12:21:19] 2026-01-11 17:20:19,605 | INFO     | [job] retrieve thread has finished
[2026-01-11 12:21:19] 2026-01-11 17:20:19,611 | INFO     | [job] job monitor thread has finished
[2026-01-11 12:21:19] 2026-01-11 17:20:19,793 | INFO     | [data] control thread has finished
[2026-01-11 12:21:19] 2026-01-11 17:20:20,361 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 12:21:19] 2026-01-11 17:20:20,373 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 12:21:19] 2026-01-11 17:20:20,387 | INFO     | [payload] control thread has finished
[2026-01-11 12:21:19] 2026-01-11 17:20:20,419 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 12:21:19] 2026-01-11 17:20:20,490 | INFO     | [data] copytool_in thread has finished
[2026-01-11 12:21:19] 2026-01-11 17:20:20,592 | INFO     | [job] control thread has finished
[2026-01-11 12:21:19] 2026-01-11 17:20:20,636 | INFO     | [payload] validate_post thread has finished
[2026-01-11 12:21:19] 2026-01-11 17:20:20,827 | INFO     | [job] validate thread has finished
[2026-01-11 12:21:19] 2026-01-11 17:20:20,831 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 12:21:19] 2026-01-11 17:20:21,158 | INFO     | [payload] failed_post thread has finished
[2026-01-11 12:21:19] 2026-01-11 17:20:21,336 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 12:21:19] 2026-01-11 17:20:21,574 | INFO     | [data] copytool_out thread has finished
[2026-01-11 12:21:19] 2026-01-11 17:20:22,342 | INFO     | [job] queue monitor thread has finished
[2026-01-11 12:21:19] 2026-01-11 17:20:24,844 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 12:21:19] 2026-01-11 17:20:28,769 | INFO     | job.realtimelogging is not enabled
[2026-01-11 12:21:19] 2026-01-11 17:20:29,775 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 12:21:19] 2026-01-11 17:20:49,106 | INFO     | PID=634133 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 12:21:19] 2026-01-11 17:20:49,107 | INFO     | .. there are 8 such processes running
[2026-01-11 12:21:19] 2026-01-11 17:20:49,108 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 12:21:19] 2026-01-11 17:20:49,108 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 12:21:19] 2026-01-11 17:20:49,109 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 12:21:19] 2026-01-11 17:21:12,156 | INFO     | [monitor] cgroup control has ended
[2026-01-11 12:21:19] 2026-01-11 17:21:13,728 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139923937871680)>', '<ExcThread(monitor, started 139923583657728)>']
[2026-01-11 12:21:19] 2026-01-11 17:21:14,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 12:21:19] 2026-01-11 17:21:14,255 | INFO     | [monitor] control thread has ended
[2026-01-11 12:21:19] 2026-01-11 17:21:18,754 | INFO     | all workflow threads have been joined
[2026-01-11 12:21:19] 2026-01-11 17:21:18,754 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 12:21:19] 2026-01-11 17:21:18,754 | INFO     | traces error code: 0
[2026-01-11 12:21:19] 2026-01-11 17:21:18,754 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 12:21:19] 2026-01-11 17:21:18,991 [wrapper] ==== pilot stdout END ====
[2026-01-11 12:21:19] 2026-01-11 17:21:18,994 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 12:21:19] 2026-01-11 17:21:18,996 [wrapper] pilotpid: 634133
[2026-01-11 12:21:19] 2026-01-11 17:21:18,999 [wrapper] Pilot exit status: 0
[2026-01-11 12:21:19] 2026-01-11 17:21:19,011 [wrapper] pandaids: 6966183119
[2026-01-11 12:21:19] 2026-01-11 17:21:19,063 [wrapper] cleanup supervisor_pilot 1098497 634134
[2026-01-11 12:21:19] 2026-01-11 17:21:19,066 [wrapper] Test setup, not cleaning
[2026-01-11 12:21:19] 2026-01-11 17:21:19,069 [wrapper] apfmon messages muted
[2026-01-11 12:21:19] 2026-01-11 17:21:19,071 [wrapper] ==== wrapper stdout END ====
[2026-01-11 12:21:19] 2026-01-11 17:21:19,073 [wrapper] ==== wrapper stderr END ====
[2026-01-11 12:21:19]  *** Error codes and diagnostics ***
[2026-01-11 12:21:19]     "exeErrorCode": 0,
[2026-01-11 12:21:19]     "exeErrorDiag": "",
[2026-01-11 12:21:19]     "pilotErrorCode": 0,
[2026-01-11 12:21:19]     "pilotErrorDiag": "",
[2026-01-11 12:21:19]  *** Listing of results directory ***
[2026-01-11 12:21:19] total 446916
[2026-01-11 12:21:19] -rwx------. 1 boincer umatlas     36322 Jan 11 07:18 runpilot2-wrapper.sh
[2026-01-11 12:21:19] -rw-r--r--. 1 boincer umatlas      5112 Jan 11 07:18 queuedata.json
[2026-01-11 12:21:19] -rw-r--r--. 1 boincer umatlas    579449 Jan 11 07:18 pilot3.tar.gz
[2026-01-11 12:21:19] -rw-r--r--. 1 boincer umatlas       100 Jan 11 07:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 12:21:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 07:19 run_atlas
[2026-01-11 12:21:19] -rw-r--r--. 1 boincer umatlas       105 Jan 11 07:19 job.xml
[2026-01-11 12:21:19] -rw-r--r--. 2 boincer umatlas 224270838 Jan 11 07:19 EVNT.47898824._001428.pool.root.1
[2026-01-11 12:21:19] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 07:19 start_atlas.sh
[2026-01-11 12:21:19] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 07:19 shared
[2026-01-11 12:21:19] -rw-r--r--. 2 boincer umatlas    592389 Jan 11 07:19 input.tar.gz
[2026-01-11 12:21:19] -rw-r--r--. 1 boincer umatlas         0 Jan 11 07:19 boinc_lockfile
[2026-01-11 12:21:19] -rw-r--r--. 1 boincer umatlas      2517 Jan 11 07:19 pandaJob.out
[2026-01-11 12:21:19] -rw-------. 1 boincer umatlas        57 Jan 11 07:19 setup.sh.local
[2026-01-11 12:21:19] -rw-------. 1 boincer umatlas    989548 Jan 11 07:19 agis_schedconf.cvmfs.json
[2026-01-11 12:21:19] drwx------. 5 boincer umatlas      4096 Jan 11 07:19 pilot3
[2026-01-11 12:21:19] -rw-------. 1 boincer umatlas 223743553 Jan 11 12:19 HITS.47898826._040801.pool.root.1
[2026-01-11 12:21:19] -rw-r--r--. 1 boincer umatlas       531 Jan 11 12:19 boinc_task_state.xml
[2026-01-11 12:21:19] -rw-------. 1 boincer umatlas      1038 Jan 11 12:19 memory_monitor_summary.json
[2026-01-11 12:21:19] -rw-------. 1 boincer umatlas   1516240 Jan 11 12:19 agis_ddmendpoints.agis.ALL.json
[2026-01-11 12:21:19] -rw-------. 1 boincer umatlas    507530 Jan 11 12:19 log.47898826._040801.job.log.tgz.1
[2026-01-11 12:21:19] -rw-------. 1 boincer umatlas      7826 Jan 11 12:20 heartbeat.json
[2026-01-11 12:21:19] -rw-r--r--. 1 boincer umatlas      6841 Jan 11 12:20 init_data.xml
[2026-01-11 12:21:19] -rw-------. 1 boincer umatlas        95 Jan 11 12:20 pilot_heartbeat.json
[2026-01-11 12:21:19] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 12:21 boinc_mmap_file
[2026-01-11 12:21:19] -rw-r--r--. 1 boincer umatlas        28 Jan 11 12:21 wrapper_checkpoint.txt
[2026-01-11 12:21:19] -rw-------. 1 boincer umatlas      4894 Jan 11 12:21 pilotlog.txt
[2026-01-11 12:21:19] -rw-------. 1 boincer umatlas   2346606 Jan 11 12:21 log.47898826._040801.job.log.1
[2026-01-11 12:21:19] -rw-------. 1 boincer umatlas       357 Jan 11 12:21 output.list
[2026-01-11 12:21:19] -rw-r--r--. 1 boincer umatlas       620 Jan 11 12:21 runtime_log
[2026-01-11 12:21:19] -rw-------. 1 boincer umatlas   2877440 Jan 11 12:21 result.tar.gz
[2026-01-11 12:21:19] -rw-r--r--. 1 boincer umatlas      9353 Jan 11 12:21 runtime_log.err
[2026-01-11 12:21:19] -rw-------. 1 boincer umatlas       658 Jan 11 12:21 7tMKDmLa9y8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmt2mKDmNo4OWn.diag
[2026-01-11 12:21:19] -rw-r--r--. 1 boincer umatlas     21379 Jan 11 12:21 stderr.txt
[2026-01-11 12:21:19] HITS file was successfully produced:
[2026-01-11 12:21:19] -rw-------. 1 boincer umatlas 223743553 Jan 11 12:19 shared/HITS.pool.root.1
[2026-01-11 12:21:19]  *** Contents of shared directory: ***
[2026-01-11 12:21:19] total 440932
[2026-01-11 12:21:19] -rw-r--r--. 2 boincer umatlas 224270838 Jan 11 07:19 ATLAS.root_0
[2026-01-11 12:21:19] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 07:19 start_atlas.sh
[2026-01-11 12:21:19] -rw-r--r--. 2 boincer umatlas    592389 Jan 11 07:19 input.tar.gz
[2026-01-11 12:21:19] -rw-------. 1 boincer umatlas 223743553 Jan 11 12:19 HITS.pool.root.1
[2026-01-11 12:21:19] -rw-------. 1 boincer umatlas   2877440 Jan 11 12:21 result.tar.gz
12:21:20 (630234): run_atlas exited; CPU time 54865.654260
12:21:20 (630234): called boinc_finish(0)

</stderr_txt>
]]>

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