Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:27:32 (61442): wrapper (7.7.26015): starting
21:27:32 (61442): wrapper: running run_atlas (--nthreads 6)
[2026-01-11 21:27:32] Arguments: --nthreads 6
[2026-01-11 21:27:32] Threads: 6
[2026-01-11 21:27:32] Checking for CVMFS
[2026-01-11 21:27:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 21:28:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 21:28:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 21:28:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 21:28:50] 2.13.3.0 61661 1 29532 155017 3 1 47057353 52428801 0 130560 0 0 0.000 1337 61 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-11 21:28:50] CVMFS is ok
[2026-01-11 21:28:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 21:28:50] Checking for apptainer binary...
[2026-01-11 21:28:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 21:28:50] Running /usr/bin/apptainer --version
[2026-01-11 21:28:50] apptainer version 1.4.5-2.el9
[2026-01-11 21:28:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 21:28:50] testio008
[2026-01-11 21:28:50] apptainer works
[2026-01-11 21:28:50] Set ATHENA_PROC_NUMBER=6
[2026-01-11 21:28:50] Set ATHENA_CORE_NUMBER=6
[2026-01-11 21:28:50] Starting ATLAS job with PandaID=6966179586
[2026-01-11 21:28:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 23:05:56]  *** The last 200 lines of the pilot log: ***
[2026-01-11 23:05:56] 2026-01-11 14:04:24,977 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 23:05:56] 2026-01-11 14:04:26,046 | INFO     | time since job start (5624s) is within the limit (349056.0s)
[2026-01-11 23:05:56] 2026-01-11 14:04:27,480 | INFO     | monitor loop #438: job 0:6966179586 is in state 'finished'
[2026-01-11 23:05:56] 2026-01-11 14:04:27,480 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 23:05:56] 2026-01-11 14:04:28,051 | INFO     | time since job start (5626s) is within the limit (349056.0s)
[2026-01-11 23:05:56] 2026-01-11 14:04:29,983 | INFO     | monitor loop #439: job 0:6966179586 is in state 'finished'
[2026-01-11 23:05:56] 2026-01-11 14:04:29,983 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 23:05:56] 2026-01-11 14:04:30,056 | INFO     | time since job start (5628s) is within the limit (349056.0s)
[2026-01-11 23:05:56] 2026-01-11 14:04:32,061 | INFO     | time since job start (5630s) is within the limit (349056.0s)
[2026-01-11 23:05:56] 2026-01-11 14:04:32,485 | INFO     | monitor loop #440: job 0:6966179586 is in state 'finished'
[2026-01-11 23:05:56] 2026-01-11 14:04:32,485 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 23:05:56] 2026-01-11 14:04:34,066 | INFO     | time since job start (5632s) is within the limit (349056.0s)
[2026-01-11 23:05:56] 2026-01-11 14:04:34,988 | INFO     | monitor loop #441: job 0:6966179586 is in state 'finished'
[2026-01-11 23:05:56] 2026-01-11 14:04:34,988 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 23:05:56] 2026-01-11 14:04:36,071 | INFO     | time since job start (5634s) is within the limit (349056.0s)
[2026-01-11 23:05:56] 2026-01-11 14:04:37,490 | INFO     | monitor loop #442: job 0:6966179586 is in state 'finished'
[2026-01-11 23:05:56] 2026-01-11 14:04:37,490 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 23:05:56] 2026-01-11 14:04:38,076 | INFO     | time since job start (5636s) is within the limit (349056.0s)
[2026-01-11 23:05:56] 2026-01-11 14:04:39,992 | INFO     | monitor loop #443: job 0:6966179586 is in state 'finished'
[2026-01-11 23:05:56] 2026-01-11 14:04:39,992 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 23:05:56] 2026-01-11 14:04:40,081 | INFO     | time since job start (5638s) is within the limit (349056.0s)
[2026-01-11 23:05:56] 2026-01-11 14:04:42,086 | INFO     | time since job start (5640s) is within the limit (349056.0s)
[2026-01-11 23:05:56] 2026-01-11 14:04:42,494 | INFO     | monitor loop #444: job 0:6966179586 is in state 'finished'
[2026-01-11 23:05:56] 2026-01-11 14:04:42,494 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 23:05:56] 2026-01-11 14:04:43,160 | INFO     | PID=65870 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 23:05:56] 2026-01-11 14:04:44,160 | INFO     | time since job start (5642s) is within the limit (349056.0s)
[2026-01-11 23:05:56] 2026-01-11 14:04:44,997 | INFO     | monitor loop #445: job 0:6966179586 is in state 'finished'
[2026-01-11 23:05:56] 2026-01-11 14:04:44,997 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 23:05:56] 2026-01-11 14:04:46,166 | INFO     | time since job start (5644s) is within the limit (349056.0s)
[2026-01-11 23:05:56] 2026-01-11 14:04:47,499 | INFO     | monitor loop #446: job 0:6966179586 is in state 'finished'
[2026-01-11 23:05:56] 2026-01-11 14:04:47,499 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 23:05:56] 2026-01-11 14:04:48,171 | INFO     | time since job start (5646s) is within the limit (349056.0s)
[2026-01-11 23:05:56] 2026-01-11 14:04:50,001 | INFO     | monitor loop #447: job 0:6966179586 is in state 'finished'
[2026-01-11 23:05:56] 2026-01-11 14:04:50,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 23:05:56] 2026-01-11 14:04:50,177 | INFO     | time since job start (5648s) is within the limit (349056.0s)
[2026-01-11 23:05:56] 2026-01-11 14:04:52,182 | INFO     | time since job start (5650s) is within the limit (349056.0s)
[2026-01-11 23:05:56] 2026-01-11 14:04:52,503 | INFO     | monitor loop #448: job 0:6966179586 is in state 'finished'
[2026-01-11 23:05:56] 2026-01-11 14:04:52,503 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 23:05:56] 2026-01-11 14:04:53,592 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 23:05:56] 2026-01-11 14:04:53,594 | INFO     | found 12 cores (12 cores per socket, 1 socket) , CPU MHz: 4260.8232499999995
[2026-01-11 23:05:56] 2026-01-11 14:04:53,595 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6966179586/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 23:05:56] 2026-01-11 14:04:53,595 | INFO     | extracted standard info from prmon json
[2026-01-11 23:05:56] 2026-01-11 14:04:53,595 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 23:05:56] 2026-01-11 14:04:53,596 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 23:05:56] 2026-01-11 14:04:53,596 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 23:05:56] 2026-01-11 14:04:53,596 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 23:05:56] 2026-01-11 14:04:53,597 | INFO     | fitting pss+swap vs Time
[2026-01-11 23:05:56] 2026-01-11 14:04:53,597 | INFO     | sum of square deviations: 183761585.0
[2026-01-11 23:05:56] 2026-01-11 14:04:53,597 | INFO     | sum of deviations: -20382198613.500008
[2026-01-11 23:05:56] 2026-01-11 14:04:53,597 | INFO     | mean x: 1768137503.5
[2026-01-11 23:05:56] 2026-01-11 14:04:53,597 | INFO     | mean y: 2655022.4166666665
[2026-01-11 23:05:56] 2026-01-11 14:04:53,597 | INFO     | intersect: 196118343577.86237
[2026-01-11 23:05:56] 2026-01-11 14:04:53,597 | INFO     | chi2: 0.15782675692988118
[2026-01-11 23:05:56] 2026-01-11 14:04:53,597 | INFO     | current memory leak: -110.92 B/s (using 84 data points, chi2=0.16)
[2026-01-11 23:05:56] 2026-01-11 14:04:53,597 | INFO     | could have reported an average CPU frequency of 4273 MHz (6 samples)
[2026-01-11 23:05:56] 2026-01-11 14:04:53,597 | INFO     | ..............................
[2026-01-11 23:05:56] 2026-01-11 14:04:53,597 | INFO     | . Timing measurements:
[2026-01-11 23:05:56] 2026-01-11 14:04:53,597 | INFO     | . get job = 0 s
[2026-01-11 23:05:56] 2026-01-11 14:04:53,597 | INFO     | . initial setup = 6 s
[2026-01-11 23:05:56] 2026-01-11 14:04:53,597 | INFO     | . payload setup = 7 s
[2026-01-11 23:05:56] 2026-01-11 14:04:53,597 | INFO     | . stage-in = 0 s
[2026-01-11 23:05:56] 2026-01-11 14:04:53,597 | INFO     | . payload execution = 5539 s
[2026-01-11 23:05:56] 2026-01-11 14:04:53,597 | INFO     | . stage-out = 0 s
[2026-01-11 23:05:56] 2026-01-11 14:04:53,598 | INFO     | . log creation = 0 s
[2026-01-11 23:05:56] 2026-01-11 14:04:53,598 | INFO     | ..............................
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | 
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | job summary report
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | --------------------------------------------------
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | PanDA job id: 6966179586
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | task id: 47898826
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | errors: (none)
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | pilot state: finished 
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | transexitcode: 0
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | exeerrorcode: 0
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | exeerrordiag: 
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | exitcode: 0
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | exitmsg: OK
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | cpuconsumptiontime: 30999 s
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | nevents: 400
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | neventsw: 0
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | pid: 72639
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | pgrp: 72639
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | corecount: 6
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | event service: False
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | sizes: {0: 2283919, 4: 2284181, 11: 2284209, 5549: 2310852, 5550: 2319907, 5553: 2319907, 5636: 2320229}
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | --------------------------------------------------
[2026-01-11 23:05:56] 2026-01-11 14:04:53,915 | INFO     | 
[2026-01-11 23:05:56] 2026-01-11 14:04:53,916 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2026-01-11 23:05:56] 2026-01-11 14:04:53,923 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 23:05:56] 2026-01-11 14:04:53,923 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 23:05:56] 2026-01-11 14:04:53,923 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 23:05:56] 2026-01-11 14:04:53,923 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 23:05:56] 2026-01-11 14:04:53,924 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 23:05:56] 2026-01-11 14:04:53,924 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 23:05:56] 2026-01-11 14:04:53,924 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 23:05:56] 2026-01-11 14:04:53,924 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 23:05:56] 2026-01-11 14:04:53,924 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 23:05:56] 2026-01-11 14:04:53,924 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 23:05:56] 2026-01-11 14:04:53,924 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 23:05:56] 2026-01-11 14:04:53,924 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 23:05:56] 2026-01-11 14:04:53,924 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 23:05:56] 2026-01-11 14:04:53,924 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 23:05:56] 2026-01-11 14:04:53,924 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 23:05:56] 2026-01-11 14:04:53,924 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 23:05:56] 2026-01-11 14:04:53,924 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 23:05:56] 2026-01-11 14:04:53,924 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 23:05:56] 2026-01-11 14:04:53,924 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 23:05:56] 2026-01-11 14:04:53,924 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 23:05:56] 2026-01-11 14:04:53,924 | INFO     | job 6966179586 has completed (purged errors)
[2026-01-11 23:05:56] 2026-01-11 14:04:53,924 | INFO     | overall cleanup function is called
[2026-01-11 23:05:56] 2026-01-11 14:04:54,929 | INFO     | --- collectZombieJob: --- 10, [72639]
[2026-01-11 23:05:56] 2026-01-11 14:04:54,929 | INFO     | zombie collector waiting for pid 72639
[2026-01-11 23:05:56] 2026-01-11 14:04:54,929 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 23:05:56] 2026-01-11 14:04:54,929 | INFO     | collected zombie processes
[2026-01-11 23:05:56] 2026-01-11 14:04:54,929 | INFO     | will attempt to kill all subprocesses of pid=72639
[2026-01-11 23:05:56] 2026-01-11 14:04:54,955 | INFO     | process IDs to be killed: [72639] (in reverse order)
[2026-01-11 23:05:56] 2026-01-11 14:04:54,975 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 23:05:56] 2026-01-11 14:04:54,975 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 23:05:56] 2026-01-11 14:04:54,977 | INFO     | did not find any defunct processes belonging to 72639
[2026-01-11 23:05:56] 2026-01-11 14:04:54,978 | INFO     | did not find any defunct processes belonging to 72639
[2026-01-11 23:05:56] 2026-01-11 14:04:54,978 | INFO     | ready for new job
[2026-01-11 23:05:56] 2026-01-11 14:04:54,978 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 23:05:56] 2026-01-11 14:04:54,979 | INFO     | ***************************************
[2026-01-11 23:05:56] 2026-01-11 14:04:54,979 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 23:05:56] 2026-01-11 14:04:54,979 | INFO     | ***************************************
[2026-01-11 23:05:56] 2026-01-11 14:04:54,979 | INFO     | 
[2026-01-11 23:05:56] 2026-01-11 14:04:54,979 | INFO     | architecture information:
[2026-01-11 23:05:56] 2026-01-11 14:04:54,979 | INFO     | executing command: cat /etc/os-release
[2026-01-11 23:05:56] 2026-01-11 14:04:54,989 | INFO     | cat /etc/os-release:
[2026-01-11 23:05:56] NAME="CentOS Linux"
[2026-01-11 23:05:56] VERSION="7 (Core)"
[2026-01-11 23:05:56] ID="centos"
[2026-01-11 23:05:56] ID_LIKE="rhel fedora"
[2026-01-11 23:05:56] VERSION_ID="7"
[2026-01-11 23:05:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 23:05:56] ANSI_COLOR="0;31"
[2026-01-11 23:05:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 23:05:56] HOME_URL="https://www.centos.org/"
[2026-01-11 23:05:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 23:05:56] 
[2026-01-11 23:05:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 23:05:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 23:05:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 23:05:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 23:05:56] 
[2026-01-11 23:05:56] 2026-01-11 14:04:54,989 | INFO     | ***************************************
[2026-01-11 23:05:56] 2026-01-11 14:04:55,492 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2026-01-11 23:05:56] 2026-01-11 14:04:55,498 | INFO     | sufficient remaining disk space (280380833792 B)
[2026-01-11 23:05:56] 2026-01-11 14:04:55,498 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 23:05:56] 2026-01-11 14:04:55,498 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 23:05:56] 2026-01-11 14:04:55,498 | INFO     | update_server=False
[2026-01-11 23:05:56] 2026-01-11 14:04:55,498 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 23:05:56] 2026-01-11 14:04:55,498 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 23:05:56] 2026-01-11 14:04:55,511 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 23:05:56] 2026-01-11 14:04:55,761 | INFO     | all job control threads have been joined
[2026-01-11 23:05:56] 2026-01-11 14:04:56,010 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 23:05:56] 2026-01-11 14:04:56,010 | INFO     | aborting loop
[2026-01-11 23:05:56] 2026-01-11 14:04:56,130 | INFO     | all data control threads have been joined
[2026-01-11 23:05:56] 2026-01-11 14:04:56,343 | INFO     | all payload control threads have been joined
[2026-01-11 23:05:56] 2026-01-11 14:04:56,503 | INFO     | [job] retrieve thread has finished
[2026-01-11 23:05:56] 2026-01-11 14:04:56,503 | INFO     | [job] queue monitor thread has finished
[2026-01-11 23:05:56] 2026-01-11 14:04:56,557 | INFO     | [job] validate thread has finished
[2026-01-11 23:05:56] 2026-01-11 14:04:56,630 | INFO     | [data] copytool_in thread has finished
[2026-01-11 23:05:56] 2026-01-11 14:04:56,679 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 23:05:56] 2026-01-11 14:04:56,684 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 23:05:56] 2026-01-11 14:04:56,766 | INFO     | [job] control thread has finished
[2026-01-11 23:05:56] 2026-01-11 14:04:57,015 | INFO     | [job] job monitor thread has finished
[2026-01-11 23:05:56] 2026-01-11 14:04:57,108 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 23:05:56] 2026-01-11 14:04:57,135 | INFO     | [data] control thread has finished
[2026-01-11 23:05:56] 2026-01-11 14:04:57,256 | INFO     | [payload] failed_post thread has finished
[2026-01-11 23:05:56] 2026-01-11 14:04:57,348 | INFO     | [payload] control thread has finished
[2026-01-11 23:05:56] 2026-01-11 14:04:57,516 | INFO     | [data] copytool_out thread has finished
[2026-01-11 23:05:56] 2026-01-11 14:04:57,721 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 23:05:56] 2026-01-11 14:04:57,835 | INFO     | [payload] validate_post thread has finished
[2026-01-11 23:05:56] 2026-01-11 14:05:01,113 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 23:05:56] 2026-01-11 14:05:06,201 | INFO     | job.realtimelogging is not enabled
[2026-01-11 23:05:56] 2026-01-11 14:05:07,206 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 23:05:56] 2026-01-11 14:05:25,243 | INFO     | PID=65870 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 23:05:56] 2026-01-11 14:05:25,243 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 23:05:56] 2026-01-11 14:05:25,243 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 23:05:56] 2026-01-11 14:05:25,243 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 23:05:56] 2026-01-11 14:05:51,518 | INFO     | [monitor] cgroup control has ended
[2026-01-11 23:05:56] 2026-01-11 14:05:51,743 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139781650184000)>', '<ExcThread(monitor, started 139781279295232)>']
[2026-01-11 23:05:56] 2026-01-11 14:05:52,377 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 23:05:56] 2026-01-11 14:05:52,377 | INFO     | [monitor] control thread has ended
[2026-01-11 23:05:56] 2026-01-11 14:05:56,768 | INFO     | all workflow threads have been joined
[2026-01-11 23:05:56] 2026-01-11 14:05:56,769 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 23:05:56] 2026-01-11 14:05:56,769 | INFO     | traces error code: 0
[2026-01-11 23:05:56] 2026-01-11 14:05:56,769 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 23:05:56] 2026-01-11 14:05:56,836 [wrapper] ==== pilot stdout END ====
[2026-01-11 23:05:56] 2026-01-11 14:05:56,840 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 23:05:56] 2026-01-11 14:05:56,844 [wrapper] pilotpid: 65870
[2026-01-11 23:05:56] 2026-01-11 14:05:56,845 [wrapper] Pilot exit status: 0
[2026-01-11 23:05:56] 2026-01-11 14:05:56,864 [wrapper] pandaids: 6966179586
[2026-01-11 23:05:56] 2026-01-11 14:05:56,875 [wrapper] cleanup supervisor_pilot   84750 65871
[2026-01-11 23:05:56] 2026-01-11 14:05:56,876 [wrapper] Test setup, not cleaning
[2026-01-11 23:05:56] 2026-01-11 14:05:56,878 [wrapper] apfmon messages muted
[2026-01-11 23:05:56] 2026-01-11 14:05:56,878 [wrapper] ==== wrapper stdout END ====
[2026-01-11 23:05:56] 2026-01-11 14:05:56,879 [wrapper] ==== wrapper stderr END ====
[2026-01-11 23:05:56]  *** Error codes and diagnostics ***
[2026-01-11 23:05:56]     "exeErrorCode": 0,
[2026-01-11 23:05:56]     "exeErrorDiag": "",
[2026-01-11 23:05:56]     "pilotErrorCode": 0,
[2026-01-11 23:05:56]     "pilotErrorDiag": "",
[2026-01-11 23:05:56]  *** Listing of results directory ***
[2026-01-11 23:05:56] total 446940
[2026-01-11 23:05:56] -rw-r--r--. 1 boinc boinc    579449 Jan 11 20:53 pilot3.tar.gz
[2026-01-11 23:05:56] -rwx------. 1 boinc boinc     36322 Jan 11 21:03 runpilot2-wrapper.sh
[2026-01-11 23:05:56] -rw-r--r--. 1 boinc boinc      5112 Jan 11 21:03 queuedata.json
[2026-01-11 23:05:56] -rw-r--r--. 1 boinc boinc       100 Jan 11 21:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 23:05:56] -rwxr-xr-x. 1 boinc boinc      7986 Jan 11 21:27 run_atlas
[2026-01-11 23:05:56] -rw-r--r--. 1 boinc boinc       105 Jan 11 21:27 job.xml
[2026-01-11 23:05:56] -rw-r--r--. 1 boinc boinc      9526 Jan 11 21:27 init_data.xml
[2026-01-11 23:05:56] -rw-r--r--. 2 boinc boinc 225200598 Jan 11 21:27 EVNT.47898824._001447.pool.root.1
[2026-01-11 23:05:56] -rw-r--r--. 2 boinc boinc     15847 Jan 11 21:27 start_atlas.sh
[2026-01-11 23:05:56] drwxrwx--x. 2 boinc boinc        68 Jan 11 21:27 shared
[2026-01-11 23:05:56] -rw-r--r--. 2 boinc boinc    592397 Jan 11 21:27 input.tar.gz
[2026-01-11 23:05:56] -rw-r--r--. 1 boinc boinc         0 Jan 11 21:27 boinc_lockfile
[2026-01-11 23:05:56] -rw-r--r--. 1 boinc boinc      2517 Jan 11 21:28 pandaJob.out
[2026-01-11 23:05:56] -rw-------. 1 boinc boinc    989548 Jan 11 21:30 agis_schedconf.cvmfs.json
[2026-01-11 23:05:56] -rw-------. 1 boinc boinc   1516240 Jan 11 21:30 agis_ddmendpoints.agis.ALL.json
[2026-01-11 23:05:56] drwx------. 5 boinc boinc      4096 Jan 11 21:30 pilot3
[2026-01-11 23:05:56] -rw-------. 1 boinc boinc 226333506 Jan 11 23:03 HITS.47898826._040800.pool.root.1
[2026-01-11 23:05:56] -rw-r--r--. 1 boinc boinc       529 Jan 11 23:03 boinc_task_state.xml
[2026-01-11 23:05:56] -rw-------. 1 boinc boinc      1026 Jan 11 23:03 memory_monitor_summary.json
[2026-01-11 23:05:56] -rw-------. 1 boinc boinc    302784 Jan 11 23:03 log.47898826._040800.job.log.tgz.1
[2026-01-11 23:05:56] -rw-------. 1 boinc boinc      7761 Jan 11 23:04 heartbeat.json
[2026-01-11 23:05:56] -rw-------. 1 boinc boinc        95 Jan 11 23:05 pilot_heartbeat.json
[2026-01-11 23:05:56] -rw-r--r--. 1 boinc boinc      8192 Jan 11 23:05 boinc_mmap_file
[2026-01-11 23:05:56] -rw-r--r--. 1 boinc boinc        27 Jan 11 23:05 wrapper_checkpoint.txt
[2026-01-11 23:05:56] -rw-------. 1 boinc boinc      4820 Jan 11 23:05 pilotlog.txt
[2026-01-11 23:05:56] -rw-------. 1 boinc boinc    809823 Jan 11 23:05 log.47898826._040800.job.log.1
[2026-01-11 23:05:56] -rw-------. 1 boinc boinc       357 Jan 11 23:05 output.list
[2026-01-11 23:05:56] -rw-r--r--. 1 boinc boinc       620 Jan 11 23:05 runtime_log
[2026-01-11 23:05:56] -rw-------. 1 boinc boinc   1136640 Jan 11 23:05 result.tar.gz
[2026-01-11 23:05:56] -rw-------. 1 boinc boinc       643 Jan 11 23:05 wh6LDmLL9y8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDms2mKDmtMm4rn.diag
[2026-01-11 23:05:56] -rw-r--r--. 1 boinc boinc      8791 Jan 11 23:05 runtime_log.err
[2026-01-11 23:05:56] -rw-r--r--. 1 boinc boinc     22047 Jan 11 23:05 stderr.txt
[2026-01-11 23:05:56] HITS file was successfully produced:
[2026-01-11 23:05:56] -rw-------. 1 boinc boinc 226333506 Jan 11 23:03 shared/HITS.pool.root.1
[2026-01-11 23:05:56]  *** Contents of shared directory: ***
[2026-01-11 23:05:56] total 442664
[2026-01-11 23:05:56] -rw-r--r--. 2 boinc boinc 225200598 Jan 11 21:27 ATLAS.root_0
[2026-01-11 23:05:56] -rw-r--r--. 2 boinc boinc     15847 Jan 11 21:27 start_atlas.sh
[2026-01-11 23:05:56] -rw-r--r--. 2 boinc boinc    592397 Jan 11 21:27 input.tar.gz
[2026-01-11 23:05:56] -rw-------. 1 boinc boinc 226333506 Jan 11 23:03 HITS.pool.root.1
[2026-01-11 23:05:56] -rw-------. 1 boinc boinc   1136640 Jan 11 23:05 result.tar.gz
23:05:58 (61442): run_atlas exited; CPU time 31037.353033
23:05:58 (61442): called boinc_finish(0)

</stderr_txt>
]]>

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