Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:03:25 (2795727): wrapper (7.7.26015): starting
07:03:25 (2795727): wrapper: running run_atlas (--nthreads 10)
[2026-01-11 07:03:25] Arguments: --nthreads 10
[2026-01-11 07:03:25] Threads: 10
[2026-01-11 07:03:25] Checking for CVMFS
[2026-01-11 07:03:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 07:03:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 07:03:26] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 07:03:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 07:03:27] 2.13.3.0 12942 41827 470708 155016 3 14 27499135 32935936 67107 16776704 0 437901289 99.773 241273601 28878 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-11 07:03:27] CVMFS is ok
[2026-01-11 07:03:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 07:03:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 07:03:27] Further information can be found at the LHC@home message board.
[2026-01-11 07:03:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 07:03:27] Checking for apptainer binary...
[2026-01-11 07:03:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 07:03:27] Running /usr/bin/apptainer --version
[2026-01-11 07:03:27] apptainer version 1.4.5-2.el9
[2026-01-11 07:03:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 07:03:27] lc-10-9.aglt2.org
[2026-01-11 07:03:27] apptainer works
[2026-01-11 07:03:28] Set ATHENA_PROC_NUMBER=10
[2026-01-11 07:03:28] Set ATHENA_CORE_NUMBER=10
[2026-01-11 07:03:28] Starting ATLAS job with PandaID=6966171661
[2026-01-11 07:03:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 08:34:51]  *** The last 200 lines of the pilot log: ***
[2026-01-11 08:34:51] 2026-01-11 13:33:17,715 | INFO     | summary of transferred files:
[2026-01-11 08:34:51] 2026-01-11 13:33:17,715 | INFO     |  -- lfn=log.47962010._003078.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 08:34:51] 2026-01-11 13:33:17,716 | INFO     | stage-out finished correctly
[2026-01-11 08:34:51] 2026-01-11 13:33:17,881 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 08:34:51] 2026-01-11 13:33:18,405 | INFO     | job 6966171661 has state=finished
[2026-01-11 08:34:51] 2026-01-11 13:33:18,405 | INFO     | preparing for final server update for job 6966171661 in state='finished'
[2026-01-11 08:34:51] 2026-01-11 13:33:18,405 | INFO     | this job has now completed (state=finished)
[2026-01-11 08:34:51] 2026-01-11 13:33:18,406 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 08:34:51] 2026-01-11 13:33:18,406 | INFO     | log transfer has been attempted: DONE
[2026-01-11 08:34:51] 2026-01-11 13:33:18,406 | INFO     | job 6966171661 has finished - writing final server update
[2026-01-11 08:34:51] 2026-01-11 13:33:18,406 | INFO     | total number of processed events: 50 (read)
[2026-01-11 08:34:51] 2026-01-11 13:33:18,407 | INFO     | executing command: lscpu
[2026-01-11 08:34:51] 2026-01-11 13:33:18,483 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 08:34:51] 2026-01-11 13:33:18,981 | WARNING  | process 2827861 can no longer be monitored (due to stat problems) - aborting
[2026-01-11 08:34:51] 2026-01-11 13:33:18,982 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6966171661/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 08:34:51] 2026-01-11 13:33:18,983 | INFO     | payload log (log.HITSMergeAthenaMP0) within allowed size limit (2147483648 B): 167589 B
[2026-01-11 08:34:51] 2026-01-11 13:33:18,983 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3721124 B
[2026-01-11 08:34:51] 2026-01-11 13:33:18,984 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 13380 B
[2026-01-11 08:34:51] 2026-01-11 13:33:18,984 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-11 08:34:51] 2026-01-11 13:33:19,445 | INFO     | time since job start (5339s) is within the limit (349056.0s)
[2026-01-11 08:34:51] 2026-01-11 13:33:21,454 | INFO     | time since job start (5341s) is within the limit (349056.0s)
[2026-01-11 08:34:51] 2026-01-11 13:33:23,460 | INFO     | time since job start (5343s) is within the limit (349056.0s)
[2026-01-11 08:34:51] 2026-01-11 13:33:25,483 | INFO     | time since job start (5345s) is within the limit (349056.0s)
[2026-01-11 08:34:51] 2026-01-11 13:33:27,493 | INFO     | time since job start (5347s) is within the limit (349056.0s)
[2026-01-11 08:34:51] 2026-01-11 13:33:29,506 | INFO     | time since job start (5349s) is within the limit (349056.0s)
[2026-01-11 08:34:51] 2026-01-11 13:33:31,523 | INFO     | time since job start (5351s) is within the limit (349056.0s)
[2026-01-11 08:34:51] 2026-01-11 13:33:33,530 | INFO     | time since job start (5353s) is within the limit (349056.0s)
[2026-01-11 08:34:51] 2026-01-11 13:33:36,150 | INFO     | PID=2807357 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-11 08:34:51] 2026-01-11 13:33:36,150 | INFO     | .. there are 84 such processes running
[2026-01-11 08:34:51] 2026-01-11 13:33:36,516 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 08:34:51] 2026-01-11 13:33:36,534 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2787.4745104166673
[2026-01-11 08:34:51] 2026-01-11 13:33:36,563 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6966171661/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 08:34:51] 2026-01-11 13:33:36,564 | INFO     | extracted standard info from prmon json
[2026-01-11 08:34:51] 2026-01-11 13:33:36,564 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 08:34:51] 2026-01-11 13:33:36,565 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 08:34:51] 2026-01-11 13:33:36,567 | INFO     | fitting pss+swap vs Time
[2026-01-11 08:34:51] 2026-01-11 13:33:36,567 | INFO     | sum of square deviations: 152830398.43037942
[2026-01-11 08:34:51] 2026-01-11 13:33:36,568 | INFO     | sum of deviations: 3186604629.3924046
[2026-01-11 08:34:51] 2026-01-11 13:33:36,568 | INFO     | mean x: 1768135850.2405064
[2026-01-11 08:34:51] 2026-01-11 13:33:36,568 | INFO     | mean y: 2731501.189873418
[2026-01-11 08:34:51] 2026-01-11 13:33:36,568 | INFO     | intersect: -36863951721.76693
[2026-01-11 08:34:51] 2026-01-11 13:33:36,568 | INFO     | chi2: 0.5110604406591923
[2026-01-11 08:34:51] 2026-01-11 13:33:36,568 | INFO     | current memory leak: 20.85 B/s (using 79 data points, chi2=0.51)
[2026-01-11 08:34:51] 2026-01-11 13:33:36,569 | INFO     | could have reported an average CPU frequency of 2753 MHz (6 samples)
[2026-01-11 08:34:51] 2026-01-11 13:33:36,569 | INFO     | ..............................
[2026-01-11 08:34:51] 2026-01-11 13:33:36,569 | INFO     | . Timing measurements:
[2026-01-11 08:34:51] 2026-01-11 13:33:36,569 | INFO     | . get job = 0 s
[2026-01-11 08:34:51] 2026-01-11 13:33:36,569 | INFO     | . initial setup = 4 s
[2026-01-11 08:34:51] 2026-01-11 13:33:36,569 | INFO     | . payload setup = 31 s
[2026-01-11 08:34:51] 2026-01-11 13:33:36,574 | INFO     | . stage-in = 0 s
[2026-01-11 08:34:51] 2026-01-11 13:33:36,574 | INFO     | . payload execution = 5253 s
[2026-01-11 08:34:51] 2026-01-11 13:33:36,574 | INFO     | . stage-out = 1 s
[2026-01-11 08:34:51] 2026-01-11 13:33:36,574 | INFO     | . log creation = 0 s
[2026-01-11 08:34:51] 2026-01-11 13:33:36,574 | INFO     | ..............................
[2026-01-11 08:34:51] 2026-01-11 13:33:36,597 | INFO     | sufficient remaining disk space (94690607104 B)
[2026-01-11 08:34:51] 2026-01-11 13:33:36,597 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-11 08:34:51] 2026-01-11 13:33:36,601 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6966171661: 7929808 B (within 4404019200 B limit)
[2026-01-11 08:34:51] 2026-01-11 13:33:36,601 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6966171661/HITS.47962010._003078.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-11 08:34:51] 2026-01-11 13:33:36,601 | INFO     | total size of present files: 0 B (workdir size: 7929808 B)
[2026-01-11 08:34:51] 2026-01-11 13:33:36,601 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6966171661/HITS.47962010._003078.pool.root.1 since it does not exist
[2026-01-11 08:34:51] 2026-01-11 13:33:36,727 | INFO     | 
[2026-01-11 08:34:51] 2026-01-11 13:33:36,727 | INFO     | job summary report
[2026-01-11 08:34:51] 2026-01-11 13:33:36,727 | INFO     | --------------------------------------------------
[2026-01-11 08:34:51] 2026-01-11 13:33:36,727 | INFO     | PanDA job id: 6966171661
[2026-01-11 08:34:51] 2026-01-11 13:33:36,727 | INFO     | task id: 47962010
[2026-01-11 08:34:51] 2026-01-11 13:33:36,727 | INFO     | errors: (none)
[2026-01-11 08:34:51] 2026-01-11 13:33:36,727 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 08:34:51] 2026-01-11 13:33:36,727 | INFO     | pilot state: finished 
[2026-01-11 08:34:51] 2026-01-11 13:33:36,728 | INFO     | transexitcode: 0
[2026-01-11 08:34:51] 2026-01-11 13:33:36,728 | INFO     | exeerrorcode: 0
[2026-01-11 08:34:51] 2026-01-11 13:33:36,728 | INFO     | exeerrordiag: 
[2026-01-11 08:34:51] 2026-01-11 13:33:36,728 | INFO     | exitcode: 0
[2026-01-11 08:34:51] 2026-01-11 13:33:36,728 | INFO     | exitmsg: OK
[2026-01-11 08:34:51] 2026-01-11 13:33:36,728 | INFO     | cpuconsumptiontime: 16862 s
[2026-01-11 08:34:51] 2026-01-11 13:33:36,728 | INFO     | nevents: 50
[2026-01-11 08:34:51] 2026-01-11 13:33:36,728 | INFO     | neventsw: 0
[2026-01-11 08:34:51] 2026-01-11 13:33:36,728 | INFO     | pid: 2827861
[2026-01-11 08:34:51] 2026-01-11 13:33:36,728 | INFO     | pgrp: 2827861
[2026-01-11 08:34:51] 2026-01-11 13:33:36,728 | INFO     | corecount: 10
[2026-01-11 08:34:51] 2026-01-11 13:33:36,728 | INFO     | event service: False
[2026-01-11 08:34:51] 2026-01-11 13:33:36,728 | INFO     | sizes: {0: 2284397, 1: 2284596, 12: 2284596, 21: 2284886, 23: 2284914, 5289: 2312110, 5291: 2321104, 5292: 2321160, 5310: 2321530}
[2026-01-11 08:34:51] 2026-01-11 13:33:36,728 | INFO     | --------------------------------------------------
[2026-01-11 08:34:51] 2026-01-11 13:33:36,729 | INFO     | 
[2026-01-11 08:34:51] 2026-01-11 13:33:36,729 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-11 08:34:51] 2026-01-11 13:33:36,862 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 08:34:51] 2026-01-11 13:33:36,862 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 08:34:51] 2026-01-11 13:33:36,862 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 08:34:51] 2026-01-11 13:33:36,862 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 08:34:51] 2026-01-11 13:33:36,862 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 08:34:51] 2026-01-11 13:33:36,862 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 08:34:51] 2026-01-11 13:33:36,862 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 08:34:51] 2026-01-11 13:33:36,862 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 08:34:51] 2026-01-11 13:33:36,862 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 08:34:51] 2026-01-11 13:33:36,863 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 08:34:51] 2026-01-11 13:33:36,863 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 08:34:51] 2026-01-11 13:33:36,863 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 08:34:51] 2026-01-11 13:33:36,863 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 08:34:51] 2026-01-11 13:33:36,863 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 08:34:51] 2026-01-11 13:33:36,863 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 08:34:51] 2026-01-11 13:33:36,863 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 08:34:51] 2026-01-11 13:33:36,863 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 08:34:51] 2026-01-11 13:33:36,863 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 08:34:51] 2026-01-11 13:33:36,863 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 08:34:51] 2026-01-11 13:33:36,863 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 08:34:51] 2026-01-11 13:33:36,863 | INFO     | job 6966171661 has completed (purged errors)
[2026-01-11 08:34:51] 2026-01-11 13:33:36,864 | INFO     | overall cleanup function is called
[2026-01-11 08:34:51] 2026-01-11 13:33:37,373 | INFO     | number of running child processes to parent process 2827861: 1
[2026-01-11 08:34:51] 2026-01-11 13:33:37,373 | INFO     | maximum number of monitored processes: 18
[2026-01-11 08:34:51] 2026-01-11 13:33:37,373 | INFO     | aborting job monitoring since job object (job id=6966171661) has expired
[2026-01-11 08:34:51] 2026-01-11 13:33:37,914 | INFO     | --- collectZombieJob: --- 10, [2827861]
[2026-01-11 08:34:51] 2026-01-11 13:33:37,914 | INFO     | zombie collector waiting for pid 2827861
[2026-01-11 08:34:51] 2026-01-11 13:33:37,914 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 08:34:51] 2026-01-11 13:33:37,914 | INFO     | collected zombie processes
[2026-01-11 08:34:51] 2026-01-11 13:33:37,914 | INFO     | will attempt to kill all subprocesses of pid=2827861
[2026-01-11 08:34:51] 2026-01-11 13:33:39,319 | INFO     | process IDs to be killed: [2827861] (in reverse order)
[2026-01-11 08:34:51] 2026-01-11 13:33:39,587 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 08:34:51] 2026-01-11 13:33:39,588 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 08:34:51] 2026-01-11 13:33:39,616 | INFO     | did not find any defunct processes belonging to 2827861
[2026-01-11 08:34:51] 2026-01-11 13:33:39,643 | INFO     | did not find any defunct processes belonging to 2827861
[2026-01-11 08:34:51] 2026-01-11 13:33:39,643 | INFO     | ready for new job
[2026-01-11 08:34:51] 2026-01-11 13:33:39,644 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 08:34:51] 2026-01-11 13:33:39,645 | INFO     | ***************************************
[2026-01-11 08:34:51] 2026-01-11 13:33:39,645 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 08:34:51] 2026-01-11 13:33:39,645 | INFO     | ***************************************
[2026-01-11 08:34:51] 2026-01-11 13:33:39,645 | INFO     | 
[2026-01-11 08:34:51] 2026-01-11 13:33:39,651 | INFO     | architecture information:
[2026-01-11 08:34:51] 2026-01-11 13:33:39,651 | INFO     | executing command: cat /etc/os-release
[2026-01-11 08:34:51] 2026-01-11 13:33:39,699 | INFO     | cat /etc/os-release:
[2026-01-11 08:34:51] NAME="CentOS Linux"
[2026-01-11 08:34:51] VERSION="7 (Core)"
[2026-01-11 08:34:51] ID="centos"
[2026-01-11 08:34:51] ID_LIKE="rhel fedora"
[2026-01-11 08:34:51] VERSION_ID="7"
[2026-01-11 08:34:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 08:34:51] ANSI_COLOR="0;31"
[2026-01-11 08:34:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 08:34:51] HOME_URL="https://www.centos.org/"
[2026-01-11 08:34:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 08:34:51] 
[2026-01-11 08:34:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 08:34:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 08:34:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 08:34:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 08:34:51] 
[2026-01-11 08:34:51] 2026-01-11 13:33:39,700 | INFO     | ***************************************
[2026-01-11 08:34:51] 2026-01-11 13:33:40,203 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-11 08:34:51] 2026-01-11 13:33:40,249 | INFO     | sufficient remaining disk space (94708432896 B)
[2026-01-11 08:34:51] 2026-01-11 13:33:40,249 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 08:34:51] 2026-01-11 13:33:40,249 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 08:34:51] 2026-01-11 13:33:40,250 | INFO     | update_server=False
[2026-01-11 08:34:51] 2026-01-11 13:33:40,250 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 08:34:51] 2026-01-11 13:33:40,505 | INFO     | all payload control threads have been joined
[2026-01-11 08:34:51] 2026-01-11 13:33:40,886 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 08:34:51] 2026-01-11 13:33:40,886 | INFO     | aborting loop
[2026-01-11 08:34:51] 2026-01-11 13:33:40,973 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 08:34:51] 2026-01-11 13:33:41,101 | INFO     | all data control threads have been joined
[2026-01-11 08:34:51] 2026-01-11 13:33:41,256 | INFO     | [job] retrieve thread has finished
[2026-01-11 08:34:51] 2026-01-11 13:33:41,423 | INFO     | [payload] failed_post thread has finished
[2026-01-11 08:34:51] 2026-01-11 13:33:41,432 | INFO     | all job control threads have been joined
[2026-01-11 08:34:51] 2026-01-11 13:33:41,511 | INFO     | [payload] control thread has finished
[2026-01-11 08:34:51] 2026-01-11 13:33:41,534 | INFO     | [data] copytool_in thread has finished
[2026-01-11 08:34:51] 2026-01-11 13:33:41,618 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 08:34:51] 2026-01-11 13:33:41,686 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 08:34:51] 2026-01-11 13:33:41,757 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 08:34:51] 2026-01-11 13:33:41,892 | INFO     | [job] job monitor thread has finished
[2026-01-11 08:34:51] 2026-01-11 13:33:41,996 | INFO     | [job] validate thread has finished
[2026-01-11 08:34:51] 2026-01-11 13:33:42,077 | INFO     | [payload] validate_post thread has finished
[2026-01-11 08:34:51] 2026-01-11 13:33:42,115 | INFO     | [data] control thread has finished
[2026-01-11 08:34:51] 2026-01-11 13:33:42,116 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 08:34:51] 2026-01-11 13:33:42,439 | INFO     | [job] control thread has finished
[2026-01-11 08:34:51] 2026-01-11 13:33:42,688 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 08:34:51] 2026-01-11 13:33:42,763 | INFO     | [job] queue monitor thread has finished
[2026-01-11 08:34:51] 2026-01-11 13:33:42,980 | INFO     | [data] copytool_out thread has finished
[2026-01-11 08:34:51] 2026-01-11 13:33:46,129 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 08:34:51] 2026-01-11 13:33:51,272 | INFO     | job.realtimelogging is not enabled
[2026-01-11 08:34:51] 2026-01-11 13:33:52,280 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 08:34:51] 2026-01-11 13:34:09,197 | INFO     | PID=2807357 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 08:34:51] 2026-01-11 13:34:09,198 | INFO     | .. there are 83 such processes running
[2026-01-11 08:34:51] 2026-01-11 13:34:09,198 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 08:34:51] 2026-01-11 13:34:09,198 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 08:34:51] 2026-01-11 13:34:09,198 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 08:34:51] 2026-01-11 13:34:14,339 [wrapper] supervise_pilot (15 min periods counter: 7)
[2026-01-11 08:34:51] 2026-01-11 13:34:29,481 | INFO     | [monitor] cgroup control has ended
[2026-01-11 08:34:51] 2026-01-11 13:34:30,907 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139632344397632)>', '<ExcThread(monitor, started 139631978858240)>']
[2026-01-11 08:34:51] 2026-01-11 13:34:31,341 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 08:34:51] 2026-01-11 13:34:31,343 | INFO     | [monitor] control thread has ended
[2026-01-11 08:34:51] 2026-01-11 13:34:35,953 | INFO     | all workflow threads have been joined
[2026-01-11 08:34:51] 2026-01-11 13:34:35,955 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 08:34:51] 2026-01-11 13:34:35,955 | INFO     | traces error code: 0
[2026-01-11 08:34:51] 2026-01-11 13:34:35,955 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 08:34:51] 2026-01-11 13:34:36,299 [wrapper] ==== pilot stdout END ====
[2026-01-11 08:34:51] 2026-01-11 13:34:36,318 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 08:34:51] 2026-01-11 13:34:36,352 [wrapper] pilotpid: 2807357
[2026-01-11 08:34:51] 2026-01-11 13:34:36,356 [wrapper] Pilot exit status: 0
[2026-01-11 08:34:51] 2026-01-11 13:34:36,423 [wrapper] pandaids: 6966171661
[2026-01-11 08:34:51] 2026-01-11 13:34:36,700 [wrapper] cleanup supervisor_pilot 3189162 2807358
[2026-01-11 08:34:51] 2026-01-11 13:34:36,712 [wrapper] Test setup, not cleaning
[2026-01-11 08:34:51] 2026-01-11 13:34:36,719 [wrapper] apfmon messages muted
[2026-01-11 08:34:51] 2026-01-11 13:34:36,721 [wrapper] ==== wrapper stdout END ====
[2026-01-11 08:34:51] 2026-01-11 13:34:36,723 [wrapper] ==== wrapper stderr END ====
[2026-01-11 08:34:51]  *** Error codes and diagnostics ***
[2026-01-11 08:34:51]     "exeErrorCode": 0,
[2026-01-11 08:34:51]     "exeErrorDiag": "",
[2026-01-11 08:34:51]     "pilotErrorCode": 0,
[2026-01-11 08:34:51]     "pilotErrorDiag": "",
[2026-01-11 08:34:51]  *** Listing of results directory ***
[2026-01-11 08:34:51] total 434332
[2026-01-11 08:34:51] -rw-r--r--. 1 boincer umatlas    579449 Jan 11 06:17 pilot3.tar.gz
[2026-01-11 08:34:51] -rwx------. 1 boincer umatlas     36322 Jan 11 06:42 runpilot2-wrapper.sh
[2026-01-11 08:34:51] -rw-r--r--. 1 boincer umatlas      5112 Jan 11 06:42 queuedata.json
[2026-01-11 08:34:51] -rw-r--r--. 1 boincer umatlas       100 Jan 11 07:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 08:34:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 07:03 run_atlas
[2026-01-11 08:34:51] -rw-r--r--. 1 boincer umatlas       105 Jan 11 07:03 job.xml
[2026-01-11 08:34:51] -rw-r--r--. 2 boincer umatlas 390344352 Jan 11 07:03 EVNT.47962006._000079.pool.root.1
[2026-01-11 08:34:51] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 07:03 start_atlas.sh
[2026-01-11 08:34:51] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 07:03 shared
[2026-01-11 08:34:51] -rw-r--r--. 2 boincer umatlas    592611 Jan 11 07:03 input.tar.gz
[2026-01-11 08:34:51] -rw-r--r--. 1 boincer umatlas         0 Jan 11 07:03 boinc_lockfile
[2026-01-11 08:34:51] -rw-r--r--. 1 boincer umatlas      2889 Jan 11 07:03 pandaJob.out
[2026-01-11 08:34:51] -rw-------. 1 boincer umatlas        57 Jan 11 07:03 setup.sh.local
[2026-01-11 08:34:51] -rw-------. 1 boincer umatlas    989548 Jan 11 07:04 agis_schedconf.cvmfs.json
[2026-01-11 08:34:51] -rw-------. 1 boincer umatlas   1516240 Jan 11 07:04 agis_ddmendpoints.agis.ALL.json
[2026-01-11 08:34:51] drwx------. 5 boincer umatlas      4096 Jan 11 07:04 pilot3
[2026-01-11 08:34:51] -rw-r--r--. 1 boincer umatlas       529 Jan 11 08:23 boinc_task_state.xml
[2026-01-11 08:34:51] -rw-r--r--. 1 boincer umatlas      6863 Jan 11 08:27 init_data.xml
[2026-01-11 08:34:51] -rw-------. 1 boincer umatlas  46313068 Jan 11 08:32 HITS.47962010._003078.pool.root.1
[2026-01-11 08:34:51] -rw-------. 1 boincer umatlas      1044 Jan 11 08:33 memory_monitor_summary.json
[2026-01-11 08:34:51] -rw-------. 1 boincer umatlas   1419949 Jan 11 08:33 log.47962010._003078.job.log.tgz.1
[2026-01-11 08:34:51] -rw-------. 1 boincer umatlas        95 Jan 11 08:33 pilot_heartbeat.json
[2026-01-11 08:34:51] -rw-------. 1 boincer umatlas      8568 Jan 11 08:33 heartbeat.json
[2026-01-11 08:34:51] -rw-------. 1 boincer umatlas      4896 Jan 11 08:34 pilotlog.txt
[2026-01-11 08:34:51] -rw-------. 1 boincer umatlas    674804 Jan 11 08:34 log.47962010._003078.job.log.1
[2026-01-11 08:34:51] -rw-------. 1 boincer umatlas       353 Jan 11 08:34 output.list
[2026-01-11 08:34:51] -rw-r--r--. 1 boincer umatlas       620 Jan 11 08:34 runtime_log
[2026-01-11 08:34:51] -rw-------. 1 boincer umatlas   2109440 Jan 11 08:34 result.tar.gz
[2026-01-11 08:34:51] -rw-------. 1 boincer umatlas       651 Jan 11 08:34 v2sLDmW18y8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmq2mKDmu6LICo.diag
[2026-01-11 08:34:51] -rw-r--r--. 1 boincer umatlas      9339 Jan 11 08:34 runtime_log.err
[2026-01-11 08:34:51] -rw-r--r--. 1 boincer umatlas        27 Jan 11 08:34 wrapper_checkpoint.txt
[2026-01-11 08:34:51] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 08:34 boinc_mmap_file
[2026-01-11 08:34:51] -rw-r--r--. 1 boincer umatlas     22534 Jan 11 08:34 stderr.txt
[2026-01-11 08:34:51] HITS file was successfully produced:
[2026-01-11 08:34:51] -rw-------. 1 boincer umatlas 46313068 Jan 11 08:32 shared/HITS.pool.root.1
[2026-01-11 08:34:51]  *** Contents of shared directory: ***
[2026-01-11 08:34:51] total 429084
[2026-01-11 08:34:51] -rw-r--r--. 2 boincer umatlas 390344352 Jan 11 07:03 ATLAS.root_0
[2026-01-11 08:34:51] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 07:03 start_atlas.sh
[2026-01-11 08:34:51] -rw-r--r--. 2 boincer umatlas    592611 Jan 11 07:03 input.tar.gz
[2026-01-11 08:34:51] -rw-------. 1 boincer umatlas  46313068 Jan 11 08:32 HITS.pool.root.1
[2026-01-11 08:34:51] -rw-------. 1 boincer umatlas   2109440 Jan 11 08:34 result.tar.gz
08:34:53 (2795727): run_atlas exited; CPU time 17089.632220
08:34:53 (2795727): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN