Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:40:23 (25387): wrapper (7.7.26015): starting
06:40:23 (25387): wrapper: running run_atlas (--nthreads 12)
[2026-01-11 06:40:23] Arguments: --nthreads 12
[2026-01-11 06:40:23] Threads: 12
[2026-01-11 06:40:23] Checking for CVMFS
[2026-01-11 06:40:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 06:40:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 06:40:23] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 06:40:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 06:40:23] 2.11.2.0 2979 353888 91316 155015 3 1 15628470 20275200 1 130560 1 148311565 99.956 20390359 16144 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-11 06:40:23] CVMFS is ok
[2026-01-11 06:40:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 06:40:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 06:40:23] Further information can be found at the LHC@home message board.
[2026-01-11 06:40:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 06:40:23] Checking for apptainer binary...
[2026-01-11 06:40:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 06:40:23] Running /usr/bin/apptainer --version
[2026-01-11 06:40:23] apptainer version 1.3.2-1.el7
[2026-01-11 06:40:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 06:40:24] c-205-21.aglt2.org
[2026-01-11 06:40:24] apptainer works
[2026-01-11 06:40:24] Set ATHENA_PROC_NUMBER=12
[2026-01-11 06:40:24] Set ATHENA_CORE_NUMBER=12
[2026-01-11 06:40:25] Starting ATLAS job with PandaID=6966171644
[2026-01-11 06:40:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 07:18:50]  *** The last 200 lines of the pilot log: ***
[2026-01-11 07:18:50]  protocol_id=None
[2026-01-11 07:18:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-11 07:18:50]  replicas=None
[2026-01-11 07:18:50]  scope=mc16_13TeV
[2026-01-11 07:18:50]  status=None
[2026-01-11 07:18:50]  status_code=0
[2026-01-11 07:18:50]  storage_token=
[2026-01-11 07:18:50]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6966171644/log.47962010._003061.job.log.tgz.1
[2026-01-11 07:18:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/8f/a1/log.47962010._003061.job.log.tgz.1
[2026-01-11 07:18:50]  workdir=None
[2026-01-11 07:18:50] ]
[2026-01-11 07:18:50] 2026-01-11 12:18:04,067 | INFO     | transferring file log.47962010._003061.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6966171644/log.47962010._003061.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-11 07:18:50] 2026-01-11 12:18:04,067 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6966171644/log.47962010._003061.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._003061.job
[2026-01-11 07:18:50] 2026-01-11 12:18:04,089 | INFO     | adding to output.list: log.47962010._003061.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/8f/a1/log.47962010._003061.job.log.tgz.
[2026-01-11 07:18:50] 2026-01-11 12:18:04,090 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 07:18:50] 2026-01-11 12:18:04,090 | INFO     | summary of transferred files:
[2026-01-11 07:18:50] 2026-01-11 12:18:04,090 | INFO     |  -- lfn=log.47962010._003061.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 07:18:50] 2026-01-11 12:18:04,090 | INFO     | stage-out finished correctly
[2026-01-11 07:18:50] 2026-01-11 12:18:04,769 | INFO     | time since job start (2244s) is within the limit (349056.0s)
[2026-01-11 07:18:50] 2026-01-11 12:18:05,884 | INFO     | PID=29076 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 07:18:50] 2026-01-11 12:18:06,884 | INFO     | time since job start (2246s) is within the limit (349056.0s)
[2026-01-11 07:18:50] 2026-01-11 12:18:07,016 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 07:18:50] 2026-01-11 12:18:07,772 | INFO     | job 6966171644 has state=finished
[2026-01-11 07:18:50] 2026-01-11 12:18:07,772 | INFO     | preparing for final server update for job 6966171644 in state='finished'
[2026-01-11 07:18:50] 2026-01-11 12:18:07,773 | INFO     | this job has now completed (state=finished)
[2026-01-11 07:18:50] 2026-01-11 12:18:07,773 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 07:18:50] 2026-01-11 12:18:07,773 | INFO     | log transfer has been attempted: DONE
[2026-01-11 07:18:50] 2026-01-11 12:18:07,773 | INFO     | job 6966171644 has finished - writing final server update
[2026-01-11 07:18:50] 2026-01-11 12:18:07,774 | INFO     | total number of processed events: 50 (read)
[2026-01-11 07:18:50] 2026-01-11 12:18:07,778 | INFO     | executing command: lscpu
[2026-01-11 07:18:50] 2026-01-11 12:18:07,802 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 07:18:50] 2026-01-11 12:18:08,890 | INFO     | time since job start (2248s) is within the limit (349056.0s)
[2026-01-11 07:18:50] 2026-01-11 12:18:09,110 | WARNING  | process 3214 can no longer be monitored (due to stat problems) - aborting
[2026-01-11 07:18:50] 2026-01-11 12:18:09,110 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966171644/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 07:18:50] 2026-01-11 12:18:09,200 | INFO     | number of running child processes to parent process 3214: 1
[2026-01-11 07:18:50] 2026-01-11 12:18:09,200 | INFO     | maximum number of monitored processes: 18
[2026-01-11 07:18:50] 2026-01-11 12:18:10,896 | INFO     | time since job start (2250s) is within the limit (349056.0s)
[2026-01-11 07:18:50] 2026-01-11 12:18:11,703 | INFO     | monitor loop #175: job 0:6966171644 is in state 'finished'
[2026-01-11 07:18:50] 2026-01-11 12:18:11,703 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 07:18:50] 2026-01-11 12:18:12,901 | INFO     | time since job start (2252s) is within the limit (349056.0s)
[2026-01-11 07:18:50] 2026-01-11 12:18:13,347 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-11 07:18:50] 2026-01-11 12:18:13,351 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2026-01-11 07:18:50] 2026-01-11 12:18:13,352 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966171644/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 07:18:50] 2026-01-11 12:18:13,353 | INFO     | extracted standard info from prmon json
[2026-01-11 07:18:50] 2026-01-11 12:18:13,353 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 07:18:50] 2026-01-11 12:18:13,353 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 07:18:50] 2026-01-11 12:18:13,354 | INFO     | fitting pss+swap vs Time
[2026-01-11 07:18:50] 2026-01-11 12:18:13,355 | INFO     | sum of square deviations: 8364291.366666672
[2026-01-11 07:18:50] 2026-01-11 12:18:13,355 | INFO     | sum of deviations: -4127465766.2666664
[2026-01-11 07:18:50] 2026-01-11 12:18:13,355 | INFO     | mean x: 1768132859.5666666
[2026-01-11 07:18:50] 2026-01-11 12:18:13,355 | INFO     | mean y: 2895628.1333333333
[2026-01-11 07:18:50] 2026-01-11 12:18:13,355 | INFO     | intersect: 872510503045.5634
[2026-01-11 07:18:50] 2026-01-11 12:18:13,355 | INFO     | chi2: 0.6103588970279576
[2026-01-11 07:18:50] 2026-01-11 12:18:13,355 | INFO     | current memory leak: -493.46 B/s (using 30 data points, chi2=0.61)
[2026-01-11 07:18:50] 2026-01-11 12:18:13,356 | INFO     | could have reported an average CPU frequency of 1833 MHz (5 samples)
[2026-01-11 07:18:50] 2026-01-11 12:18:13,356 | INFO     | ..............................
[2026-01-11 07:18:50] 2026-01-11 12:18:13,356 | INFO     | . Timing measurements:
[2026-01-11 07:18:50] 2026-01-11 12:18:13,356 | INFO     | . get job = 0 s
[2026-01-11 07:18:50] 2026-01-11 12:18:13,356 | INFO     | . initial setup = 2 s
[2026-01-11 07:18:50] 2026-01-11 12:18:13,356 | INFO     | . payload setup = 7 s
[2026-01-11 07:18:50] 2026-01-11 12:18:13,356 | INFO     | . stage-in = 0 s
[2026-01-11 07:18:50] 2026-01-11 12:18:13,357 | INFO     | . payload execution = 2214 s
[2026-01-11 07:18:50] 2026-01-11 12:18:13,357 | INFO     | . stage-out = 0 s
[2026-01-11 07:18:50] 2026-01-11 12:18:13,357 | INFO     | . log creation = 0 s
[2026-01-11 07:18:50] 2026-01-11 12:18:13,357 | INFO     | ..............................
[2026-01-11 07:18:50] 2026-01-11 12:18:13,639 | INFO     | 
[2026-01-11 07:18:50] 2026-01-11 12:18:13,639 | INFO     | job summary report
[2026-01-11 07:18:50] 2026-01-11 12:18:13,640 | INFO     | --------------------------------------------------
[2026-01-11 07:18:50] 2026-01-11 12:18:13,640 | INFO     | PanDA job id: 6966171644
[2026-01-11 07:18:50] 2026-01-11 12:18:13,640 | INFO     | task id: 47962010
[2026-01-11 07:18:50] 2026-01-11 12:18:13,640 | INFO     | errors: (none)
[2026-01-11 07:18:50] 2026-01-11 12:18:13,640 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 07:18:50] 2026-01-11 12:18:13,640 | INFO     | pilot state: finished 
[2026-01-11 07:18:50] 2026-01-11 12:18:13,641 | INFO     | transexitcode: 0
[2026-01-11 07:18:50] 2026-01-11 12:18:13,641 | INFO     | exeerrorcode: 0
[2026-01-11 07:18:50] 2026-01-11 12:18:13,641 | INFO     | exeerrordiag: 
[2026-01-11 07:18:50] 2026-01-11 12:18:13,641 | INFO     | exitcode: 0
[2026-01-11 07:18:50] 2026-01-11 12:18:13,641 | INFO     | exitmsg: OK
[2026-01-11 07:18:50] 2026-01-11 12:18:13,641 | INFO     | cpuconsumptiontime: 19566 s
[2026-01-11 07:18:50] 2026-01-11 12:18:13,641 | INFO     | nevents: 50
[2026-01-11 07:18:50] 2026-01-11 12:18:13,642 | INFO     | neventsw: 0
[2026-01-11 07:18:50] 2026-01-11 12:18:13,642 | INFO     | pid: 3214
[2026-01-11 07:18:50] 2026-01-11 12:18:13,642 | INFO     | pgrp: 3214
[2026-01-11 07:18:50] 2026-01-11 12:18:13,642 | INFO     | corecount: 12
[2026-01-11 07:18:50] 2026-01-11 12:18:13,642 | INFO     | event service: False
[2026-01-11 07:18:50] 2026-01-11 12:18:13,642 | INFO     | sizes: {0: 2284568, 5: 2284830, 11: 2284886, 2225: 2310779, 2227: 2319773, 2230: 2319829, 2237: 2320235}
[2026-01-11 07:18:50] 2026-01-11 12:18:13,643 | INFO     | --------------------------------------------------
[2026-01-11 07:18:50] 2026-01-11 12:18:13,643 | INFO     | 
[2026-01-11 07:18:50] 2026-01-11 12:18:13,643 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 07:18:50] 2026-01-11 12:18:13,667 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 07:18:50] 2026-01-11 12:18:13,668 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 07:18:50] 2026-01-11 12:18:13,668 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 07:18:50] 2026-01-11 12:18:13,668 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 07:18:50] 2026-01-11 12:18:13,668 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 07:18:50] 2026-01-11 12:18:13,668 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 07:18:50] 2026-01-11 12:18:13,669 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 07:18:50] 2026-01-11 12:18:13,669 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 07:18:50] 2026-01-11 12:18:13,669 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 07:18:50] 2026-01-11 12:18:13,669 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 07:18:50] 2026-01-11 12:18:13,669 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 07:18:50] 2026-01-11 12:18:13,669 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 07:18:50] 2026-01-11 12:18:13,670 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 07:18:50] 2026-01-11 12:18:13,670 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 07:18:50] 2026-01-11 12:18:13,670 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 07:18:50] 2026-01-11 12:18:13,670 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 07:18:50] 2026-01-11 12:18:13,670 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 07:18:50] 2026-01-11 12:18:13,670 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 07:18:50] 2026-01-11 12:18:13,671 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 07:18:50] 2026-01-11 12:18:13,671 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 07:18:50] 2026-01-11 12:18:13,671 | INFO     | job 6966171644 has completed (purged errors)
[2026-01-11 07:18:50] 2026-01-11 12:18:13,671 | INFO     | overall cleanup function is called
[2026-01-11 07:18:50] 2026-01-11 12:18:14,684 | INFO     | --- collectZombieJob: --- 10, [3214]
[2026-01-11 07:18:50] 2026-01-11 12:18:14,684 | INFO     | zombie collector waiting for pid 3214
[2026-01-11 07:18:50] 2026-01-11 12:18:14,685 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 07:18:50] 2026-01-11 12:18:14,685 | INFO     | collected zombie processes
[2026-01-11 07:18:50] 2026-01-11 12:18:14,685 | INFO     | will attempt to kill all subprocesses of pid=3214
[2026-01-11 07:18:50] 2026-01-11 12:18:14,776 | INFO     | process IDs to be killed: [3214] (in reverse order)
[2026-01-11 07:18:50] 2026-01-11 12:18:14,827 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 07:18:50] 2026-01-11 12:18:14,828 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 07:18:50] 2026-01-11 12:18:14,831 | INFO     | did not find any defunct processes belonging to 3214
[2026-01-11 07:18:50] 2026-01-11 12:18:14,833 | INFO     | did not find any defunct processes belonging to 3214
[2026-01-11 07:18:50] 2026-01-11 12:18:14,833 | INFO     | ready for new job
[2026-01-11 07:18:50] 2026-01-11 12:18:14,834 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 07:18:50] 2026-01-11 12:18:14,835 | INFO     | ***************************************
[2026-01-11 07:18:50] 2026-01-11 12:18:14,835 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 07:18:50] 2026-01-11 12:18:14,835 | INFO     | ***************************************
[2026-01-11 07:18:50] 2026-01-11 12:18:14,835 | INFO     | 
[2026-01-11 07:18:50] 2026-01-11 12:18:14,836 | INFO     | architecture information:
[2026-01-11 07:18:50] 2026-01-11 12:18:14,836 | INFO     | executing command: cat /etc/os-release
[2026-01-11 07:18:50] 2026-01-11 12:18:14,852 | INFO     | cat /etc/os-release:
[2026-01-11 07:18:50] NAME="CentOS Linux"
[2026-01-11 07:18:50] VERSION="7 (Core)"
[2026-01-11 07:18:50] ID="centos"
[2026-01-11 07:18:50] ID_LIKE="rhel fedora"
[2026-01-11 07:18:50] VERSION_ID="7"
[2026-01-11 07:18:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 07:18:50] ANSI_COLOR="0;31"
[2026-01-11 07:18:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 07:18:50] HOME_URL="https://www.centos.org/"
[2026-01-11 07:18:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 07:18:50] 
[2026-01-11 07:18:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 07:18:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 07:18:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 07:18:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 07:18:50] 
[2026-01-11 07:18:50] 2026-01-11 12:18:14,852 | INFO     | ***************************************
[2026-01-11 07:18:50] 2026-01-11 12:18:15,355 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 07:18:50] 2026-01-11 12:18:15,372 | INFO     | sufficient remaining disk space (29153558528 B)
[2026-01-11 07:18:50] 2026-01-11 12:18:15,372 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 07:18:50] 2026-01-11 12:18:15,373 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 07:18:50] 2026-01-11 12:18:15,373 | INFO     | update_server=False
[2026-01-11 07:18:50] 2026-01-11 12:18:15,373 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 07:18:50] 2026-01-11 12:18:15,373 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 07:18:50] 2026-01-11 12:18:15,374 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:18:50] 2026-01-11 12:18:15,374 | INFO     | aborting loop
[2026-01-11 07:18:50] 2026-01-11 12:18:15,374 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:18:50] 2026-01-11 12:18:16,005 | INFO     | all job control threads have been joined
[2026-01-11 07:18:50] 2026-01-11 12:18:16,014 | INFO     | all data control threads have been joined
[2026-01-11 07:18:50] 2026-01-11 12:18:16,379 | INFO     | [job] retrieve thread has finished
[2026-01-11 07:18:50] 2026-01-11 12:18:16,380 | INFO     | [job] job monitor thread has finished
[2026-01-11 07:18:50] 2026-01-11 12:18:16,380 | INFO     | [job] queue monitor thread has finished
[2026-01-11 07:18:50] 2026-01-11 12:18:16,604 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 07:18:50] 2026-01-11 12:18:16,616 | INFO     | all payload control threads have been joined
[2026-01-11 07:18:50] 2026-01-11 12:18:16,676 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 07:18:50] 2026-01-11 12:18:16,733 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 07:18:50] 2026-01-11 12:18:17,010 | INFO     | [job] control thread has finished
[2026-01-11 07:18:50] 2026-01-11 12:18:17,019 | INFO     | [data] control thread has finished
[2026-01-11 07:18:50] 2026-01-11 12:18:17,110 | INFO     | [data] copytool_in thread has finished
[2026-01-11 07:18:50] 2026-01-11 12:18:17,377 | INFO     | [data] copytool_out thread has finished
[2026-01-11 07:18:50] 2026-01-11 12:18:17,603 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 07:18:50] 2026-01-11 12:18:17,621 | INFO     | [payload] control thread has finished
[2026-01-11 07:18:50] 2026-01-11 12:18:17,722 | INFO     | [payload] validate_post thread has finished
[2026-01-11 07:18:50] 2026-01-11 12:18:17,748 | INFO     | [job] validate thread has finished
[2026-01-11 07:18:50] 2026-01-11 12:18:17,941 | INFO     | [payload] failed_post thread has finished
[2026-01-11 07:18:50] 2026-01-11 12:18:21,609 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 07:18:50] 2026-01-11 12:18:26,073 | INFO     | job.realtimelogging is not enabled
[2026-01-11 07:18:50] 2026-01-11 12:18:27,079 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 07:18:50] 2026-01-11 12:18:42,955 | INFO     | [monitor] cgroup control has ended
[2026-01-11 07:18:50] 2026-01-11 12:18:44,995 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140351127447360)>', '<ExcThread(monitor, started 140350404425472)>']
[2026-01-11 07:18:50] 2026-01-11 12:18:46,109 | INFO     | PID=29076 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 07:18:50] 2026-01-11 12:18:46,109 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 07:18:50] 2026-01-11 12:18:46,109 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 07:18:50] 2026-01-11 12:18:46,109 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 07:18:50] 2026-01-11 12:18:46,109 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 07:18:50] 2026-01-11 12:18:46,110 | INFO     | [monitor] control thread has ended
[2026-01-11 07:18:50] 2026-01-11 12:18:50,020 | INFO     | all workflow threads have been joined
[2026-01-11 07:18:50] 2026-01-11 12:18:50,020 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 07:18:50] 2026-01-11 12:18:50,021 | INFO     | traces error code: 0
[2026-01-11 07:18:50] 2026-01-11 12:18:50,021 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 07:18:50] 2026-01-11 12:18:50,102 [wrapper] ==== pilot stdout END ====
[2026-01-11 07:18:50] 2026-01-11 12:18:50,106 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 07:18:50] 2026-01-11 12:18:50,110 [wrapper] pilotpid: 29076
[2026-01-11 07:18:50] 2026-01-11 12:18:50,114 [wrapper] Pilot exit status: 0
[2026-01-11 07:18:50] 2026-01-11 12:18:50,128 [wrapper] pandaids: 6966171644
[2026-01-11 07:18:50] 2026-01-11 12:18:50,171 [wrapper] cleanup supervisor_pilot 16977 29077
[2026-01-11 07:18:50] 2026-01-11 12:18:50,175 [wrapper] Test setup, not cleaning
[2026-01-11 07:18:50] 2026-01-11 12:18:50,179 [wrapper] apfmon messages muted
[2026-01-11 07:18:50] 2026-01-11 12:18:50,183 [wrapper] ==== wrapper stdout END ====
[2026-01-11 07:18:50] 2026-01-11 12:18:50,187 [wrapper] ==== wrapper stderr END ====
[2026-01-11 07:18:50]  *** Error codes and diagnostics ***
[2026-01-11 07:18:50]     "exeErrorCode": 0,
[2026-01-11 07:18:50]     "exeErrorDiag": "",
[2026-01-11 07:18:50]     "pilotErrorCode": 0,
[2026-01-11 07:18:50]     "pilotErrorDiag": "",
[2026-01-11 07:18:50]  *** Listing of results directory ***
[2026-01-11 07:18:50] total 434576
[2026-01-11 07:18:50] -rw-r--r-- 1 boincer umatlas    579449 Jan 11 06:17 pilot3.tar.gz
[2026-01-11 07:18:50] -rw-r--r-- 1 boincer umatlas      5112 Jan 11 06:37 queuedata.json
[2026-01-11 07:18:50] -rwx------ 1 boincer umatlas     36322 Jan 11 06:39 runpilot2-wrapper.sh
[2026-01-11 07:18:50] -rw-r--r-- 1 boincer umatlas       100 Jan 11 06:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 07:18:50] -rwxr-xr-x 1 boincer umatlas      7986 Jan 11 06:40 run_atlas
[2026-01-11 07:18:50] -rw-r--r-- 1 boincer umatlas       105 Jan 11 06:40 job.xml
[2026-01-11 07:18:50] -rw-r--r-- 2 boincer umatlas 390344352 Jan 11 06:40 EVNT.47962006._000079.pool.root.1
[2026-01-11 07:18:50] -rw-r--r-- 2 boincer umatlas     15847 Jan 11 06:40 start_atlas.sh
[2026-01-11 07:18:50] drwxrwx--x 2 boincer umatlas      4096 Jan 11 06:40 shared
[2026-01-11 07:18:50] -rw-r--r-- 2 boincer umatlas    592620 Jan 11 06:40 input.tar.gz
[2026-01-11 07:18:50] -rw-r--r-- 1 boincer umatlas         0 Jan 11 06:40 boinc_lockfile
[2026-01-11 07:18:50] -rw-r--r-- 1 boincer umatlas      2889 Jan 11 06:40 pandaJob.out
[2026-01-11 07:18:50] -rw------- 1 boincer umatlas        57 Jan 11 06:40 setup.sh.local
[2026-01-11 07:18:50] -rw------- 1 boincer umatlas    989548 Jan 11 06:40 agis_schedconf.cvmfs.json
[2026-01-11 07:18:50] -rw------- 1 boincer umatlas   1516240 Jan 11 06:40 agis_ddmendpoints.agis.ALL.json
[2026-01-11 07:18:50] drwx------ 5 boincer umatlas      4096 Jan 11 06:40 pilot3
[2026-01-11 07:18:50] -rw-r--r-- 1 boincer umatlas       529 Jan 11 07:09 boinc_task_state.xml
[2026-01-11 07:18:50] -rw-r--r-- 1 boincer umatlas      5953 Jan 11 07:12 init_data.xml
[2026-01-11 07:18:50] -rw------- 1 boincer umatlas  46784973 Jan 11 07:17 HITS.47962010._003061.pool.root.1
[2026-01-11 07:18:50] -rw------- 1 boincer umatlas      1049 Jan 11 07:17 memory_monitor_summary.json
[2026-01-11 07:18:50] -rw------- 1 boincer umatlas        95 Jan 11 07:18 pilot_heartbeat.json
[2026-01-11 07:18:50] -rw------- 1 boincer umatlas   1617624 Jan 11 07:18 log.47962010._003061.job.log.tgz.1
[2026-01-11 07:18:50] -rw------- 1 boincer umatlas      8624 Jan 11 07:18 heartbeat.json
[2026-01-11 07:18:50] -rw-r--r-- 1 boincer umatlas        27 Jan 11 07:18 wrapper_checkpoint.txt
[2026-01-11 07:18:50] -rw-r--r-- 1 boincer umatlas      8192 Jan 11 07:18 boinc_mmap_file
[2026-01-11 07:18:50] -rw------- 1 boincer umatlas      4818 Jan 11 07:18 pilotlog.txt
[2026-01-11 07:18:50] -rw------- 1 boincer umatlas    364381 Jan 11 07:18 log.47962010._003061.job.log.1
[2026-01-11 07:18:50] -rw------- 1 boincer umatlas       353 Jan 11 07:18 output.list
[2026-01-11 07:18:50] -rw-r--r-- 1 boincer umatlas       620 Jan 11 07:18 runtime_log
[2026-01-11 07:18:50] -rw------- 1 boincer umatlas   1996800 Jan 11 07:18 result.tar.gz
[2026-01-11 07:18:50] -rw-r--r-- 1 boincer umatlas      9344 Jan 11 07:18 runtime_log.err
[2026-01-11 07:18:50] -rw------- 1 boincer umatlas       659 Jan 11 07:18 KLDMDmQy8y8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZ2mKDm3ULhZn.diag
[2026-01-11 07:18:50] -rw-r--r-- 1 boincer umatlas     21957 Jan 11 07:18 stderr.txt
[2026-01-11 07:18:50] HITS file was successfully produced:
[2026-01-11 07:18:50] -rw------- 1 boincer umatlas 46784973 Jan 11 07:17 shared/HITS.pool.root.1
[2026-01-11 07:18:50]  *** Contents of shared directory: ***
[2026-01-11 07:18:50] total 429440
[2026-01-11 07:18:50] -rw-r--r-- 2 boincer umatlas 390344352 Jan 11 06:40 ATLAS.root_0
[2026-01-11 07:18:50] -rw-r--r-- 2 boincer umatlas     15847 Jan 11 06:40 start_atlas.sh
[2026-01-11 07:18:50] -rw-r--r-- 2 boincer umatlas    592620 Jan 11 06:40 input.tar.gz
[2026-01-11 07:18:50] -rw------- 1 boincer umatlas  46784973 Jan 11 07:17 HITS.pool.root.1
[2026-01-11 07:18:50] -rw------- 1 boincer umatlas   1996800 Jan 11 07:18 result.tar.gz
07:18:52 (25387): run_atlas exited; CPU time 19197.894712
07:18:52 (25387): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN