Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:16:14 (1937040): wrapper (7.7.26015): starting
06:16:14 (1937040): wrapper: running run_atlas (--nthreads 8)
[2026-01-11 06:16:14] Arguments: --nthreads 8
[2026-01-11 06:16:14] Threads: 8
[2026-01-11 06:16:14] Checking for CVMFS
[2026-01-11 06:16:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 06:16:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 06:16:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 06:16:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 06:16:15] 2.13.3.0 11502 96172 222604 155014 1 166 31481141 32935936 25701 16776704 0 657118874 99.576 743376513 37945 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-11 06:16:15] CVMFS is ok
[2026-01-11 06:16:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 06:16:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 06:16:15] Further information can be found at the LHC@home message board.
[2026-01-11 06:16:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 06:16:15] Checking for apptainer binary...
[2026-01-11 06:16:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 06:16:15] Running /usr/bin/apptainer --version
[2026-01-11 06:16:15] apptainer version 1.4.5-2.el9
[2026-01-11 06:16:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 06:16:16] c7-2-15.aglt2.org
[2026-01-11 06:16:16] apptainer works
[2026-01-11 06:16:16] Set ATHENA_PROC_NUMBER=8
[2026-01-11 06:16:16] Set ATHENA_CORE_NUMBER=8
[2026-01-11 06:16:16] Starting ATLAS job with PandaID=6965803231
[2026-01-11 06:16:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 07:49:02]  *** The last 200 lines of the pilot log: ***
[2026-01-11 07:49:02]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-11 07:49:02]  is_altstaged=None
[2026-01-11 07:49:02]  is_tar=False
[2026-01-11 07:49:02]  lfn=log.47962010._002683.job.log.tgz.1
[2026-01-11 07:49:02]  mtime=0
[2026-01-11 07:49:02]  protocol_id=None
[2026-01-11 07:49:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-11 07:49:02]  replicas=None
[2026-01-11 07:49:02]  scope=mc16_13TeV
[2026-01-11 07:49:02]  status=None
[2026-01-11 07:49:02]  status_code=0
[2026-01-11 07:49:02]  storage_token=
[2026-01-11 07:49:02]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6965803231/log.47962010._002683.job.log.tgz.1
[2026-01-11 07:49:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/cc/01/log.47962010._002683.job.log.tgz.1
[2026-01-11 07:49:02]  workdir=None
[2026-01-11 07:49:02] ]
[2026-01-11 07:49:02] 2026-01-11 12:48:14,364 | INFO     | transferring file log.47962010._002683.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6965803231/log.47962010._002683.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-11 07:49:02] 2026-01-11 12:48:14,364 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6965803231/log.47962010._002683.job.log.tgz.1 /tmp/boinchome/slots/3/log.47962010._002683.job
[2026-01-11 07:49:02] 2026-01-11 12:48:14,386 | INFO     | adding to output.list: log.47962010._002683.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/cc/01/log.47962010._002683.job.log.tgz.
[2026-01-11 07:49:02] 2026-01-11 12:48:14,387 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 07:49:02] 2026-01-11 12:48:14,387 | INFO     | summary of transferred files:
[2026-01-11 07:49:02] 2026-01-11 12:48:14,387 | INFO     |  -- lfn=log.47962010._002683.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 07:49:02] 2026-01-11 12:48:14,387 | INFO     | stage-out finished correctly
[2026-01-11 07:49:02] 2026-01-11 12:48:14,775 | INFO     | time since job start (5487s) is within the limit (349056.0s)
[2026-01-11 07:49:02] 2026-01-11 12:48:15,671 | INFO     | monitor loop #391: job 0:6965803231 is in state 'finished'
[2026-01-11 07:49:02] 2026-01-11 12:48:15,671 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 07:49:02] 2026-01-11 12:48:16,025 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 07:49:02] 2026-01-11 12:48:16,675 | INFO     | job 6965803231 has state=finished
[2026-01-11 07:49:02] 2026-01-11 12:48:16,675 | INFO     | preparing for final server update for job 6965803231 in state='finished'
[2026-01-11 07:49:02] 2026-01-11 12:48:16,676 | INFO     | this job has now completed (state=finished)
[2026-01-11 07:49:02] 2026-01-11 12:48:16,676 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 07:49:02] 2026-01-11 12:48:16,676 | INFO     | log transfer has been attempted: DONE
[2026-01-11 07:49:02] 2026-01-11 12:48:16,676 | INFO     | job 6965803231 has finished - writing final server update
[2026-01-11 07:49:02] 2026-01-11 12:48:16,677 | INFO     | total number of processed events: 50 (read)
[2026-01-11 07:49:02] 2026-01-11 12:48:16,678 | INFO     | executing command: lscpu
[2026-01-11 07:49:02] 2026-01-11 12:48:16,733 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 07:49:02] 2026-01-11 12:48:16,778 | INFO     | time since job start (5489s) is within the limit (349056.0s)
[2026-01-11 07:49:02] 2026-01-11 12:48:18,175 | INFO     | monitor loop #392: job 0:6965803231 is in state 'finished'
[2026-01-11 07:49:02] 2026-01-11 12:48:18,175 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 07:49:02] 2026-01-11 12:48:18,783 | INFO     | time since job start (5491s) is within the limit (349056.0s)
[2026-01-11 07:49:02] 2026-01-11 12:48:20,466 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 07:49:02] 2026-01-11 12:48:20,471 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3268.0530416666666
[2026-01-11 07:49:02] 2026-01-11 12:48:20,484 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6965803231/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 07:49:02] 2026-01-11 12:48:20,484 | INFO     | extracted standard info from prmon json
[2026-01-11 07:49:02] 2026-01-11 12:48:20,485 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 07:49:02] 2026-01-11 12:48:20,485 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 07:49:02] 2026-01-11 12:48:20,486 | INFO     | fitting pss+swap vs Time
[2026-01-11 07:49:02] 2026-01-11 12:48:20,486 | INFO     | sum of square deviations: 177206610.55421674
[2026-01-11 07:49:02] 2026-01-11 12:48:20,486 | INFO     | sum of deviations: 7019142782.542167
[2026-01-11 07:49:02] 2026-01-11 12:48:20,486 | INFO     | mean x: 1768133061.6626506
[2026-01-11 07:49:02] 2026-01-11 12:48:20,486 | INFO     | mean y: 2516943.626506024
[2026-01-11 07:49:02] 2026-01-11 12:48:20,487 | INFO     | intersect: -70033123259.23416
[2026-01-11 07:49:02] 2026-01-11 12:48:20,487 | INFO     | chi2: 0.6382267123840926
[2026-01-11 07:49:02] 2026-01-11 12:48:20,487 | INFO     | current memory leak: 39.61 B/s (using 83 data points, chi2=0.64)
[2026-01-11 07:49:02] 2026-01-11 12:48:20,487 | INFO     | could have reported an average CPU frequency of 3248 MHz (7 samples)
[2026-01-11 07:49:02] 2026-01-11 12:48:20,487 | INFO     | ..............................
[2026-01-11 07:49:02] 2026-01-11 12:48:20,487 | INFO     | . Timing measurements:
[2026-01-11 07:49:02] 2026-01-11 12:48:20,487 | INFO     | . get job = 0 s
[2026-01-11 07:49:02] 2026-01-11 12:48:20,487 | INFO     | . initial setup = 2 s
[2026-01-11 07:49:02] 2026-01-11 12:48:20,487 | INFO     | . payload setup = 13 s
[2026-01-11 07:49:02] 2026-01-11 12:48:20,487 | INFO     | . stage-in = 0 s
[2026-01-11 07:49:02] 2026-01-11 12:48:20,487 | INFO     | . payload execution = 5444 s
[2026-01-11 07:49:02] 2026-01-11 12:48:20,487 | INFO     | . stage-out = 0 s
[2026-01-11 07:49:02] 2026-01-11 12:48:20,487 | INFO     | . log creation = 0 s
[2026-01-11 07:49:02] 2026-01-11 12:48:20,487 | INFO     | ..............................
[2026-01-11 07:49:02] 2026-01-11 12:48:20,533 | INFO     | 
[2026-01-11 07:49:02] 2026-01-11 12:48:20,533 | INFO     | job summary report
[2026-01-11 07:49:02] 2026-01-11 12:48:20,533 | INFO     | --------------------------------------------------
[2026-01-11 07:49:02] 2026-01-11 12:48:20,533 | INFO     | PanDA job id: 6965803231
[2026-01-11 07:49:02] 2026-01-11 12:48:20,533 | INFO     | task id: 47962010
[2026-01-11 07:49:02] 2026-01-11 12:48:20,533 | INFO     | errors: (none)
[2026-01-11 07:49:02] 2026-01-11 12:48:20,533 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 07:49:02] 2026-01-11 12:48:20,533 | INFO     | pilot state: finished 
[2026-01-11 07:49:02] 2026-01-11 12:48:20,533 | INFO     | transexitcode: 0
[2026-01-11 07:49:02] 2026-01-11 12:48:20,533 | INFO     | exeerrorcode: 0
[2026-01-11 07:49:02] 2026-01-11 12:48:20,533 | INFO     | exeerrordiag: 
[2026-01-11 07:49:02] 2026-01-11 12:48:20,533 | INFO     | exitcode: 0
[2026-01-11 07:49:02] 2026-01-11 12:48:20,533 | INFO     | exitmsg: OK
[2026-01-11 07:49:02] 2026-01-11 12:48:20,533 | INFO     | cpuconsumptiontime: 12206 s
[2026-01-11 07:49:02] 2026-01-11 12:48:20,533 | INFO     | nevents: 50
[2026-01-11 07:49:02] 2026-01-11 12:48:20,534 | INFO     | neventsw: 0
[2026-01-11 07:49:02] 2026-01-11 12:48:20,534 | INFO     | pid: 1955746
[2026-01-11 07:49:02] 2026-01-11 12:48:20,534 | INFO     | pgrp: 1955746
[2026-01-11 07:49:02] 2026-01-11 12:48:20,534 | INFO     | corecount: 8
[2026-01-11 07:49:02] 2026-01-11 12:48:20,534 | INFO     | event service: False
[2026-01-11 07:49:02] 2026-01-11 12:48:20,534 | INFO     | sizes: {0: 2284569, 1: 2284597, 9: 2284859, 12: 2284887, 5461: 2312306, 5462: 2321300, 5464: 2321484, 5468: 2321730}
[2026-01-11 07:49:02] 2026-01-11 12:48:20,534 | INFO     | --------------------------------------------------
[2026-01-11 07:49:02] 2026-01-11 12:48:20,534 | INFO     | 
[2026-01-11 07:49:02] 2026-01-11 12:48:20,534 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-11 07:49:02] 2026-01-11 12:48:20,555 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 07:49:02] 2026-01-11 12:48:20,555 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 07:49:02] 2026-01-11 12:48:20,555 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 07:49:02] 2026-01-11 12:48:20,555 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 07:49:02] 2026-01-11 12:48:20,555 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 07:49:02] 2026-01-11 12:48:20,555 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 07:49:02] 2026-01-11 12:48:20,555 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 07:49:02] 2026-01-11 12:48:20,555 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 07:49:02] 2026-01-11 12:48:20,555 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 07:49:02] 2026-01-11 12:48:20,556 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 07:49:02] 2026-01-11 12:48:20,556 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 07:49:02] 2026-01-11 12:48:20,556 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 07:49:02] 2026-01-11 12:48:20,556 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 07:49:02] 2026-01-11 12:48:20,556 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 07:49:02] 2026-01-11 12:48:20,556 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 07:49:02] 2026-01-11 12:48:20,556 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 07:49:02] 2026-01-11 12:48:20,556 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 07:49:02] 2026-01-11 12:48:20,556 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 07:49:02] 2026-01-11 12:48:20,556 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 07:49:02] 2026-01-11 12:48:20,556 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 07:49:02] 2026-01-11 12:48:20,556 | INFO     | job 6965803231 has completed (purged errors)
[2026-01-11 07:49:02] 2026-01-11 12:48:20,556 | INFO     | overall cleanup function is called
[2026-01-11 07:49:02] 2026-01-11 12:48:21,571 | INFO     | --- collectZombieJob: --- 10, [1955746]
[2026-01-11 07:49:02] 2026-01-11 12:48:21,571 | INFO     | zombie collector waiting for pid 1955746
[2026-01-11 07:49:02] 2026-01-11 12:48:21,571 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 07:49:02] 2026-01-11 12:48:21,571 | INFO     | collected zombie processes
[2026-01-11 07:49:02] 2026-01-11 12:48:21,571 | INFO     | will attempt to kill all subprocesses of pid=1955746
[2026-01-11 07:49:02] 2026-01-11 12:48:21,951 | INFO     | process IDs to be killed: [1955746] (in reverse order)
[2026-01-11 07:49:02] 2026-01-11 12:48:22,082 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 07:49:02] 2026-01-11 12:48:22,082 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 07:49:02] 2026-01-11 12:48:22,100 | INFO     | did not find any defunct processes belonging to 1955746
[2026-01-11 07:49:02] 2026-01-11 12:48:22,118 | INFO     | did not find any defunct processes belonging to 1955746
[2026-01-11 07:49:02] 2026-01-11 12:48:22,118 | INFO     | ready for new job
[2026-01-11 07:49:02] 2026-01-11 12:48:22,118 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 07:49:02] 2026-01-11 12:48:22,120 | INFO     | ***************************************
[2026-01-11 07:49:02] 2026-01-11 12:48:22,122 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 07:49:02] 2026-01-11 12:48:22,122 | INFO     | ***************************************
[2026-01-11 07:49:02] 2026-01-11 12:48:22,122 | INFO     | 
[2026-01-11 07:49:02] 2026-01-11 12:48:22,127 | INFO     | architecture information:
[2026-01-11 07:49:02] 2026-01-11 12:48:22,127 | INFO     | executing command: cat /etc/os-release
[2026-01-11 07:49:02] 2026-01-11 12:48:22,145 | INFO     | cat /etc/os-release:
[2026-01-11 07:49:02] NAME="CentOS Linux"
[2026-01-11 07:49:02] VERSION="7 (Core)"
[2026-01-11 07:49:02] ID="centos"
[2026-01-11 07:49:02] ID_LIKE="rhel fedora"
[2026-01-11 07:49:02] VERSION_ID="7"
[2026-01-11 07:49:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 07:49:02] ANSI_COLOR="0;31"
[2026-01-11 07:49:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 07:49:02] HOME_URL="https://www.centos.org/"
[2026-01-11 07:49:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 07:49:02] 
[2026-01-11 07:49:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 07:49:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 07:49:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 07:49:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 07:49:02] 
[2026-01-11 07:49:02] 2026-01-11 12:48:22,147 | INFO     | ***************************************
[2026-01-11 07:49:02] 2026-01-11 12:48:22,650 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-11 07:49:02] 2026-01-11 12:48:22,668 | INFO     | sufficient remaining disk space (74867277824 B)
[2026-01-11 07:49:02] 2026-01-11 12:48:22,668 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 07:49:02] 2026-01-11 12:48:22,668 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 07:49:02] 2026-01-11 12:48:22,668 | INFO     | update_server=False
[2026-01-11 07:49:02] 2026-01-11 12:48:22,668 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 07:49:02] 2026-01-11 12:48:22,669 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 07:49:02] 2026-01-11 12:48:22,669 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:49:02] 2026-01-11 12:48:22,669 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 07:49:02] 2026-01-11 12:48:22,670 | INFO     | aborting loop
[2026-01-11 07:49:02] 2026-01-11 12:48:23,145 | INFO     | all data control threads have been joined
[2026-01-11 07:49:02] 2026-01-11 12:48:23,320 | INFO     | all payload control threads have been joined
[2026-01-11 07:49:02] 2026-01-11 12:48:23,399 | INFO     | all job control threads have been joined
[2026-01-11 07:49:02] 2026-01-11 12:48:23,675 | INFO     | [job] job monitor thread has finished
[2026-01-11 07:49:02] 2026-01-11 12:48:23,682 | INFO     | [job] retrieve thread has finished
[2026-01-11 07:49:02] 2026-01-11 12:48:23,768 | INFO     | [payload] validate_post thread has finished
[2026-01-11 07:49:02] 2026-01-11 12:48:23,896 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 07:49:02] 2026-01-11 12:48:24,151 | INFO     | [data] control thread has finished
[2026-01-11 07:49:02] 2026-01-11 12:48:24,329 | INFO     | [payload] control thread has finished
[2026-01-11 07:49:02] 2026-01-11 12:48:24,377 | INFO     | [payload] failed_post thread has finished
[2026-01-11 07:49:02] 2026-01-11 12:48:24,406 | INFO     | [job] control thread has finished
[2026-01-11 07:49:02] 2026-01-11 12:48:24,610 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 07:49:02] 2026-01-11 12:48:24,670 | INFO     | [data] copytool_out thread has finished
[2026-01-11 07:49:02] 2026-01-11 12:48:24,911 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 07:49:02] 2026-01-11 12:48:24,912 | INFO     | [job] validate thread has finished
[2026-01-11 07:49:02] 2026-01-11 12:48:24,964 | INFO     | [data] copytool_in thread has finished
[2026-01-11 07:49:02] 2026-01-11 12:48:24,995 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 07:49:02] 2026-01-11 12:48:25,546 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:49:02] 2026-01-11 12:48:26,552 | INFO     | [job] queue monitor thread has finished
[2026-01-11 07:49:02] 2026-01-11 12:48:26,673 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 07:49:02] 2026-01-11 12:48:52,303 | INFO     | PID=1942206 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 07:49:02] 2026-01-11 12:48:52,303 | INFO     | .. there are 21 such processes running
[2026-01-11 07:49:02] 2026-01-11 12:48:52,304 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 07:49:02] 2026-01-11 12:48:52,304 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 07:49:02] 2026-01-11 12:48:52,304 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 07:49:02] 2026-01-11 12:48:56,306 | INFO     | [monitor] cgroup control has ended
[2026-01-11 07:49:02] 2026-01-11 12:48:57,509 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140314701616960)>', '<ExcThread(monitor, started 140314207569664)>']
[2026-01-11 07:49:02] 2026-01-11 12:48:58,339 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 07:49:02] 2026-01-11 12:48:58,339 | INFO     | [monitor] control thread has ended
[2026-01-11 07:49:02] 2026-01-11 12:49:02,521 | INFO     | all workflow threads have been joined
[2026-01-11 07:49:02] 2026-01-11 12:49:02,521 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 07:49:02] 2026-01-11 12:49:02,521 | INFO     | traces error code: 0
[2026-01-11 07:49:02] 2026-01-11 12:49:02,521 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 07:49:02] 2026-01-11 12:49:02,627 [wrapper] ==== pilot stdout END ====
[2026-01-11 07:49:02] 2026-01-11 12:49:02,630 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 07:49:02] 2026-01-11 12:49:02,632 [wrapper] pilotpid: 1942206
[2026-01-11 07:49:02] 2026-01-11 12:49:02,634 [wrapper] Pilot exit status: 0
[2026-01-11 07:49:02] 2026-01-11 12:49:02,643 [wrapper] pandaids: 6965803231
[2026-01-11 07:49:02] 2026-01-11 12:49:02,731 [wrapper] cleanup supervisor_pilot 2223097 1942208
[2026-01-11 07:49:02] 2026-01-11 12:49:02,735 [wrapper] Test setup, not cleaning
[2026-01-11 07:49:02] 2026-01-11 12:49:02,738 [wrapper] apfmon messages muted
[2026-01-11 07:49:02] 2026-01-11 12:49:02,741 [wrapper] ==== wrapper stdout END ====
[2026-01-11 07:49:02] 2026-01-11 12:49:02,743 [wrapper] ==== wrapper stderr END ====
[2026-01-11 07:49:02]  *** Error codes and diagnostics ***
[2026-01-11 07:49:02]     "exeErrorCode": 0,
[2026-01-11 07:49:02]     "exeErrorDiag": "",
[2026-01-11 07:49:02]     "pilotErrorCode": 0,
[2026-01-11 07:49:02]     "pilotErrorDiag": "",
[2026-01-11 07:49:02]  *** Listing of results directory ***
[2026-01-11 07:49:02] total 435868
[2026-01-11 07:49:02] -rw-r--r--. 1 boincer umatlas    579449 Jan 10 18:00 pilot3.tar.gz
[2026-01-11 07:49:02] -rwx------. 1 boincer umatlas     36322 Jan 10 18:05 runpilot2-wrapper.sh
[2026-01-11 07:49:02] -rw-r--r--. 1 boincer umatlas      5112 Jan 10 18:05 queuedata.json
[2026-01-11 07:49:02] -rw-r--r--. 1 boincer umatlas       100 Jan 11 06:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 07:49:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 06:16 run_atlas
[2026-01-11 07:49:02] -rw-r--r--. 1 boincer umatlas       105 Jan 11 06:16 job.xml
[2026-01-11 07:49:02] -rw-r--r--. 2 boincer umatlas 391230903 Jan 11 06:16 EVNT.47962006._000048.pool.root.1
[2026-01-11 07:49:02] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 06:16 start_atlas.sh
[2026-01-11 07:49:02] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 06:16 shared
[2026-01-11 07:49:02] -rw-r--r--. 2 boincer umatlas    592612 Jan 11 06:16 input.tar.gz
[2026-01-11 07:49:02] -rw-r--r--. 1 boincer umatlas         0 Jan 11 06:16 boinc_lockfile
[2026-01-11 07:49:02] -rw-r--r--. 1 boincer umatlas      2890 Jan 11 06:16 pandaJob.out
[2026-01-11 07:49:02] -rw-------. 1 boincer umatlas        57 Jan 11 06:16 setup.sh.local
[2026-01-11 07:49:02] -rw-------. 1 boincer umatlas    989548 Jan 11 06:16 agis_schedconf.cvmfs.json
[2026-01-11 07:49:02] -rw-------. 1 boincer umatlas   1516240 Jan 11 06:16 agis_ddmendpoints.agis.ALL.json
[2026-01-11 07:49:02] drwx------. 5 boincer umatlas      4096 Jan 11 06:16 pilot3
[2026-01-11 07:49:02] -rw-r--r--. 1 boincer umatlas       529 Jan 11 07:40 boinc_task_state.xml
[2026-01-11 07:49:02] -rw-r--r--. 1 boincer umatlas      6944 Jan 11 07:46 init_data.xml
[2026-01-11 07:49:02] -rw-------. 1 boincer umatlas  47181078 Jan 11 07:48 HITS.47962010._002683.pool.root.1
[2026-01-11 07:49:02] -rw-------. 1 boincer umatlas      1038 Jan 11 07:48 memory_monitor_summary.json
[2026-01-11 07:49:02] -rw-------. 1 boincer umatlas   1199212 Jan 11 07:48 log.47962010._002683.job.log.tgz.1
[2026-01-11 07:49:02] -rw-------. 1 boincer umatlas      8527 Jan 11 07:48 heartbeat.json
[2026-01-11 07:49:02] -rw-------. 1 boincer umatlas        95 Jan 11 07:48 pilot_heartbeat.json
[2026-01-11 07:49:02] -rw-r--r--. 1 boincer umatlas        27 Jan 11 07:48 wrapper_checkpoint.txt
[2026-01-11 07:49:02] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 07:48 boinc_mmap_file
[2026-01-11 07:49:02] -rw-------. 1 boincer umatlas      4824 Jan 11 07:49 pilotlog.txt
[2026-01-11 07:49:02] -rw-------. 1 boincer umatlas    800010 Jan 11 07:49 log.47962010._002683.job.log.1
[2026-01-11 07:49:02] -rw-------. 1 boincer umatlas       353 Jan 11 07:49 output.list
[2026-01-11 07:49:02] -rw-r--r--. 1 boincer umatlas       620 Jan 11 07:49 runtime_log
[2026-01-11 07:49:02] -rw-------. 1 boincer umatlas   2017280 Jan 11 07:49 result.tar.gz
[2026-01-11 07:49:02] -rw-r--r--. 1 boincer umatlas      9337 Jan 11 07:49 runtime_log.err
[2026-01-11 07:49:02] -rw-------. 1 boincer umatlas       652 Jan 11 07:49 AXzNDmICxy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6dhKDmuuuvCn.diag
[2026-01-11 07:49:02] -rw-r--r--. 1 boincer umatlas     21548 Jan 11 07:49 stderr.txt
[2026-01-11 07:49:02] HITS file was successfully produced:
[2026-01-11 07:49:02] -rw-------. 1 boincer umatlas 47181078 Jan 11 07:48 shared/HITS.pool.root.1
[2026-01-11 07:49:02]  *** Contents of shared directory: ***
[2026-01-11 07:49:02] total 430712
[2026-01-11 07:49:02] -rw-r--r--. 2 boincer umatlas 391230903 Jan 11 06:16 ATLAS.root_0
[2026-01-11 07:49:02] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 06:16 start_atlas.sh
[2026-01-11 07:49:02] -rw-r--r--. 2 boincer umatlas    592612 Jan 11 06:16 input.tar.gz
[2026-01-11 07:49:02] -rw-------. 1 boincer umatlas  47181078 Jan 11 07:48 HITS.pool.root.1
[2026-01-11 07:49:02] -rw-------. 1 boincer umatlas   2017280 Jan 11 07:49 result.tar.gz
07:49:04 (1937040): run_atlas exited; CPU time 12232.827092
07:49:04 (1937040): called boinc_finish(0)

</stderr_txt>
]]>

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