Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:46:37 (26785): wrapper (7.7.26015): starting
05:46:37 (26785): wrapper: running run_atlas (--nthreads 8)
[2026-01-11 05:46:37] Arguments: --nthreads 8
[2026-01-11 05:46:37] Threads: 8
[2026-01-11 05:46:37] Checking for CVMFS
[2026-01-11 05:46:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 05:46:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 05:46:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 05:46:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 05:46:38] 2.11.2.0 14221 183806 139784 155013 2 1 10605606 18432001 1 130560 0 123364738 99.980 7048660 32238 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-11 05:46:38] CVMFS is ok
[2026-01-11 05:46:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 05:46:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 05:46:38] Further information can be found at the LHC@home message board.
[2026-01-11 05:46:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 05:46:38] Checking for apptainer binary...
[2026-01-11 05:46:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 05:46:38] Running /usr/bin/apptainer --version
[2026-01-11 05:46:38] apptainer version 1.3.2-1.el7
[2026-01-11 05:46:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 05:46:40] c-206-9.aglt2.org
[2026-01-11 05:46:40] apptainer works
[2026-01-11 05:46:40] Set ATHENA_PROC_NUMBER=8
[2026-01-11 05:46:40] Set ATHENA_CORE_NUMBER=8
[2026-01-11 05:46:40] Starting ATLAS job with PandaID=6966153968
[2026-01-11 05:46:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 07:30:16]  *** The last 200 lines of the pilot log: ***
[2026-01-11 07:30:16] 2026-01-11 12:29:39,631 | INFO     | PID=30838 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 07:30:16] 2026-01-11 12:29:40,598 | INFO     | monitor loop #472: job 0:6966153968 is in state 'finished'
[2026-01-11 07:30:16] 2026-01-11 12:29:40,598 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 07:30:16] 2026-01-11 12:29:40,631 | INFO     | time since job start (6164s) is within the limit (349056.0s)
[2026-01-11 07:30:16] 2026-01-11 12:29:42,637 | INFO     | time since job start (6166s) is within the limit (349056.0s)
[2026-01-11 07:30:16] 2026-01-11 12:29:43,101 | INFO     | monitor loop #473: job 0:6966153968 is in state 'finished'
[2026-01-11 07:30:16] 2026-01-11 12:29:43,101 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 07:30:16] 2026-01-11 12:29:44,159 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-11 07:30:16] 2026-01-11 12:29:44,165 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 1645.875
[2026-01-11 07:30:16] 2026-01-11 12:29:44,168 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966153968/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 07:30:16] 2026-01-11 12:29:44,169 | INFO     | extracted standard info from prmon json
[2026-01-11 07:30:16] 2026-01-11 12:29:44,169 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 07:30:16] 2026-01-11 12:29:44,169 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 07:30:16] 2026-01-11 12:29:44,169 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 07:30:16] 2026-01-11 12:29:44,170 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 07:30:16] 2026-01-11 12:29:44,171 | INFO     | fitting pss+swap vs Time
[2026-01-11 07:30:16] 2026-01-11 12:29:44,172 | INFO     | sum of square deviations: 319447850.0
[2026-01-11 07:30:16] 2026-01-11 12:29:44,172 | INFO     | sum of deviations: 4927586221.999999
[2026-01-11 07:30:16] 2026-01-11 12:29:44,172 | INFO     | mean x: 1768131495.0
[2026-01-11 07:30:16] 2026-01-11 12:29:44,172 | INFO     | mean y: 2519685.3663366335
[2026-01-11 07:30:16] 2026-01-11 12:29:44,172 | INFO     | intersect: -27271479477.3961
[2026-01-11 07:30:16] 2026-01-11 12:29:44,173 | INFO     | chi2: 1.485068295082593
[2026-01-11 07:30:16] 2026-01-11 12:29:44,173 | INFO     | sum of square deviations: 274312120.0
[2026-01-11 07:30:16] 2026-01-11 12:29:44,173 | INFO     | sum of deviations: 4806138424.5
[2026-01-11 07:30:16] 2026-01-11 12:29:44,173 | INFO     | mean x: 1768131342.5
[2026-01-11 07:30:16] 2026-01-11 12:29:44,174 | INFO     | mean y: 2519279.0520833335
[2026-01-11 07:30:16] 2026-01-11 12:29:44,174 | INFO     | intersect: -30976367052.15348
[2026-01-11 07:30:16] 2026-01-11 12:29:44,174 | INFO     | chi2: 1.4881518077791072
[2026-01-11 07:30:16] 2026-01-11 12:29:44,174 | INFO     | current chi2=1.4881518077791072 (change=-0.20763440353041726 %)
[2026-01-11 07:30:16] 2026-01-11 12:29:44,174 | INFO     | right removable region: 95
[2026-01-11 07:30:16] 2026-01-11 12:29:44,174 | INFO     | sum of square deviations: 274312120.0
[2026-01-11 07:30:16] 2026-01-11 12:29:44,175 | INFO     | sum of deviations: -9179021116.0
[2026-01-11 07:30:16] 2026-01-11 12:29:44,175 | INFO     | mean x: 1768131647.5
[2026-01-11 07:30:16] 2026-01-11 12:29:44,175 | INFO     | mean y: 2566183.25
[2026-01-11 07:30:16] 2026-01-11 12:29:44,175 | INFO     | intersect: 59167716189.27368
[2026-01-11 07:30:16] 2026-01-11 12:29:44,175 | INFO     | chi2: 0.09209113174698984
[2026-01-11 07:30:16] 2026-01-11 12:29:44,175 | INFO     | current chi2=0.09209113174698984 (change=93.7988621767817 %)
[2026-01-11 07:30:16] 2026-01-11 12:29:44,176 | INFO     | sum of square deviations: 233641590.0
[2026-01-11 07:30:16] 2026-01-11 12:29:44,176 | INFO     | sum of deviations: -7618050635.999999
[2026-01-11 07:30:16] 2026-01-11 12:29:44,176 | INFO     | mean x: 1768131800.0
[2026-01-11 07:30:16] 2026-01-11 12:29:44,176 | INFO     | mean y: 2560155.8571428573
[2026-01-11 07:30:16] 2026-01-11 12:29:44,176 | INFO     | intersect: 57653758230.31736
[2026-01-11 07:30:16] 2026-01-11 12:29:44,177 | INFO     | chi2: 0.07980229415478725
[2026-01-11 07:30:16] 2026-01-11 12:29:44,177 | INFO     | current chi2=0.07980229415478725 (change=13.344213888004772 %)
[2026-01-11 07:30:16] 2026-01-11 12:29:44,177 | INFO     | left removable region: 20
[2026-01-11 07:30:16] 2026-01-11 12:29:44,177 | INFO     | sum of square deviations: 130793150.0
[2026-01-11 07:30:16] 2026-01-11 12:29:44,177 | INFO     | sum of deviations: -984307712.0
[2026-01-11 07:30:16] 2026-01-11 12:29:44,177 | INFO     | mean x: 1768131922.0
[2026-01-11 07:30:16] 2026-01-11 12:29:44,178 | INFO     | mean y: 2531158.1733333333
[2026-01-11 07:30:16] 2026-01-11 12:29:44,178 | INFO     | intersect: 13308930512.09961
[2026-01-11 07:30:16] 2026-01-11 12:29:44,178 | INFO     | chi2: 0.02369291938439165
[2026-01-11 07:30:16] 2026-01-11 12:29:44,178 | INFO     | current memory leak: -7.53 B/s (using 75 data points, chi2=0.02)
[2026-01-11 07:30:16] 2026-01-11 12:29:44,178 | INFO     | could have reported an average CPU frequency of 1860 MHz (7 samples)
[2026-01-11 07:30:16] 2026-01-11 12:29:44,178 | INFO     | ..............................
[2026-01-11 07:30:16] 2026-01-11 12:29:44,179 | INFO     | . Timing measurements:
[2026-01-11 07:30:16] 2026-01-11 12:29:44,179 | INFO     | . get job = 0 s
[2026-01-11 07:30:16] 2026-01-11 12:29:44,179 | INFO     | . initial setup = 2 s
[2026-01-11 07:30:16] 2026-01-11 12:29:44,179 | INFO     | . payload setup = 7 s
[2026-01-11 07:30:16] 2026-01-11 12:29:44,179 | INFO     | . stage-in = 0 s
[2026-01-11 07:30:16] 2026-01-11 12:29:44,179 | INFO     | . payload execution = 6131 s
[2026-01-11 07:30:16] 2026-01-11 12:29:44,179 | INFO     | . stage-out = 0 s
[2026-01-11 07:30:16] 2026-01-11 12:29:44,179 | INFO     | . log creation = 0 s
[2026-01-11 07:30:16] 2026-01-11 12:29:44,179 | INFO     | ..............................
[2026-01-11 07:30:16] 2026-01-11 12:29:44,261 | INFO     | 
[2026-01-11 07:30:16] 2026-01-11 12:29:44,261 | INFO     | job summary report
[2026-01-11 07:30:16] 2026-01-11 12:29:44,261 | INFO     | --------------------------------------------------
[2026-01-11 07:30:16] 2026-01-11 12:29:44,261 | INFO     | PanDA job id: 6966153968
[2026-01-11 07:30:16] 2026-01-11 12:29:44,261 | INFO     | task id: 47929288
[2026-01-11 07:30:16] 2026-01-11 12:29:44,262 | INFO     | errors: (none)
[2026-01-11 07:30:16] 2026-01-11 12:29:44,262 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 07:30:16] 2026-01-11 12:29:44,262 | INFO     | pilot state: finished 
[2026-01-11 07:30:16] 2026-01-11 12:29:44,262 | INFO     | transexitcode: 0
[2026-01-11 07:30:16] 2026-01-11 12:29:44,262 | INFO     | exeerrorcode: 0
[2026-01-11 07:30:16] 2026-01-11 12:29:44,262 | INFO     | exeerrordiag: 
[2026-01-11 07:30:16] 2026-01-11 12:29:44,263 | INFO     | exitcode: 0
[2026-01-11 07:30:16] 2026-01-11 12:29:44,263 | INFO     | exitmsg: OK
[2026-01-11 07:30:16] 2026-01-11 12:29:44,263 | INFO     | cpuconsumptiontime: 45784 s
[2026-01-11 07:30:16] 2026-01-11 12:29:44,263 | INFO     | nevents: 400
[2026-01-11 07:30:16] 2026-01-11 12:29:44,263 | INFO     | neventsw: 0
[2026-01-11 07:30:16] 2026-01-11 12:29:44,263 | INFO     | pid: 4982
[2026-01-11 07:30:16] 2026-01-11 12:29:44,264 | INFO     | pgrp: 4982
[2026-01-11 07:30:16] 2026-01-11 12:29:44,264 | INFO     | corecount: 8
[2026-01-11 07:30:16] 2026-01-11 12:29:44,264 | INFO     | event service: False
[2026-01-11 07:30:16] 2026-01-11 12:29:44,264 | INFO     | sizes: {0: 2284014, 5: 2284276, 11: 2284332, 6142: 2311297, 6143: 2320295, 6146: 2320351, 6152: 2320673}
[2026-01-11 07:30:16] 2026-01-11 12:29:44,264 | INFO     | --------------------------------------------------
[2026-01-11 07:30:16] 2026-01-11 12:29:44,264 | INFO     | 
[2026-01-11 07:30:16] 2026-01-11 12:29:44,265 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 07:30:16] 2026-01-11 12:29:44,288 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 07:30:16] 2026-01-11 12:29:44,289 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 07:30:16] 2026-01-11 12:29:44,289 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 07:30:16] 2026-01-11 12:29:44,289 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 07:30:16] 2026-01-11 12:29:44,289 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 07:30:16] 2026-01-11 12:29:44,289 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 07:30:16] 2026-01-11 12:29:44,290 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 07:30:16] 2026-01-11 12:29:44,290 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 07:30:16] 2026-01-11 12:29:44,290 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 07:30:16] 2026-01-11 12:29:44,290 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 07:30:16] 2026-01-11 12:29:44,290 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 07:30:16] 2026-01-11 12:29:44,290 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 07:30:16] 2026-01-11 12:29:44,291 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 07:30:16] 2026-01-11 12:29:44,291 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 07:30:16] 2026-01-11 12:29:44,291 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 07:30:16] 2026-01-11 12:29:44,291 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 07:30:16] 2026-01-11 12:29:44,291 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 07:30:16] 2026-01-11 12:29:44,291 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 07:30:16] 2026-01-11 12:29:44,292 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 07:30:16] 2026-01-11 12:29:44,292 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 07:30:16] 2026-01-11 12:29:44,292 | INFO     | job 6966153968 has completed (purged errors)
[2026-01-11 07:30:16] 2026-01-11 12:29:44,292 | INFO     | overall cleanup function is called
[2026-01-11 07:30:16] 2026-01-11 12:29:45,300 | INFO     | --- collectZombieJob: --- 10, [4982]
[2026-01-11 07:30:16] 2026-01-11 12:29:45,300 | INFO     | zombie collector waiting for pid 4982
[2026-01-11 07:30:16] 2026-01-11 12:29:45,301 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 07:30:16] 2026-01-11 12:29:45,301 | INFO     | collected zombie processes
[2026-01-11 07:30:16] 2026-01-11 12:29:45,301 | INFO     | will attempt to kill all subprocesses of pid=4982
[2026-01-11 07:30:16] 2026-01-11 12:29:45,396 | INFO     | process IDs to be killed: [4982] (in reverse order)
[2026-01-11 07:30:16] 2026-01-11 12:29:45,444 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 07:30:16] 2026-01-11 12:29:45,445 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 07:30:16] 2026-01-11 12:29:45,449 | INFO     | did not find any defunct processes belonging to 4982
[2026-01-11 07:30:16] 2026-01-11 12:29:45,452 | INFO     | did not find any defunct processes belonging to 4982
[2026-01-11 07:30:16] 2026-01-11 12:29:45,452 | INFO     | ready for new job
[2026-01-11 07:30:16] 2026-01-11 12:29:45,452 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 07:30:16] 2026-01-11 12:29:45,453 | INFO     | ***************************************
[2026-01-11 07:30:16] 2026-01-11 12:29:45,453 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 07:30:16] 2026-01-11 12:29:45,454 | INFO     | ***************************************
[2026-01-11 07:30:16] 2026-01-11 12:29:45,454 | INFO     | 
[2026-01-11 07:30:16] 2026-01-11 12:29:45,455 | INFO     | architecture information:
[2026-01-11 07:30:16] 2026-01-11 12:29:45,455 | INFO     | executing command: cat /etc/os-release
[2026-01-11 07:30:16] 2026-01-11 12:29:45,470 | INFO     | cat /etc/os-release:
[2026-01-11 07:30:16] NAME="CentOS Linux"
[2026-01-11 07:30:16] VERSION="7 (Core)"
[2026-01-11 07:30:16] ID="centos"
[2026-01-11 07:30:16] ID_LIKE="rhel fedora"
[2026-01-11 07:30:16] VERSION_ID="7"
[2026-01-11 07:30:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 07:30:16] ANSI_COLOR="0;31"
[2026-01-11 07:30:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 07:30:16] HOME_URL="https://www.centos.org/"
[2026-01-11 07:30:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 07:30:16] 
[2026-01-11 07:30:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 07:30:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 07:30:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 07:30:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 07:30:16] 
[2026-01-11 07:30:16] 2026-01-11 12:29:45,471 | INFO     | ***************************************
[2026-01-11 07:30:16] 2026-01-11 12:29:45,973 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 07:30:16] 2026-01-11 12:29:45,990 | INFO     | sufficient remaining disk space (29407313920 B)
[2026-01-11 07:30:16] 2026-01-11 12:29:45,991 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 07:30:16] 2026-01-11 12:29:45,991 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 07:30:16] 2026-01-11 12:29:45,991 | INFO     | update_server=False
[2026-01-11 07:30:16] 2026-01-11 12:29:45,991 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 07:30:16] 2026-01-11 12:29:45,991 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:30:16] 2026-01-11 12:29:45,992 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 07:30:16] 2026-01-11 12:29:46,061 | INFO     | all data control threads have been joined
[2026-01-11 07:30:16] 2026-01-11 12:29:46,574 | INFO     | all payload control threads have been joined
[2026-01-11 07:30:16] 2026-01-11 12:29:46,599 | INFO     | all job control threads have been joined
[2026-01-11 07:30:16] 2026-01-11 12:29:46,608 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:30:16] 2026-01-11 12:29:46,608 | INFO     | aborting loop
[2026-01-11 07:30:16] 2026-01-11 12:29:46,994 | INFO     | [job] retrieve thread has finished
[2026-01-11 07:30:16] 2026-01-11 12:29:46,997 | INFO     | [job] queue monitor thread has finished
[2026-01-11 07:30:16] 2026-01-11 12:29:47,017 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 07:30:16] 2026-01-11 12:29:47,021 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 07:30:16] 2026-01-11 12:29:47,031 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 07:30:16] 2026-01-11 12:29:47,066 | INFO     | [data] control thread has finished
[2026-01-11 07:30:16] 2026-01-11 12:29:47,423 | INFO     | [data] copytool_in thread has finished
[2026-01-11 07:30:16] 2026-01-11 12:29:47,580 | INFO     | [payload] control thread has finished
[2026-01-11 07:30:16] 2026-01-11 12:29:47,604 | INFO     | [job] control thread has finished
[2026-01-11 07:30:16] 2026-01-11 12:29:47,613 | INFO     | [job] job monitor thread has finished
[2026-01-11 07:30:16] 2026-01-11 12:29:47,921 | INFO     | [payload] validate_post thread has finished
[2026-01-11 07:30:16] 2026-01-11 12:29:47,998 | INFO     | [data] copytool_out thread has finished
[2026-01-11 07:30:16] 2026-01-11 12:29:48,270 | INFO     | [job] validate thread has finished
[2026-01-11 07:30:16] 2026-01-11 12:29:48,431 | INFO     | [payload] failed_post thread has finished
[2026-01-11 07:30:16] 2026-01-11 12:29:48,889 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 07:30:16] 2026-01-11 12:29:52,895 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 07:30:16] 2026-01-11 12:29:56,949 | INFO     | job.realtimelogging is not enabled
[2026-01-11 07:30:16] 2026-01-11 12:29:57,954 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 07:30:16] 2026-01-11 12:30:03,334 | INFO     | [monitor] cgroup control has ended
[2026-01-11 07:30:16] 2026-01-11 12:30:03,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140542460802880)>', '<ExcThread(monitor, started 140541715011328)>']
[2026-01-11 07:30:16] 2026-01-11 12:30:08,972 | INFO     | all workflow threads have been joined
[2026-01-11 07:30:16] 2026-01-11 12:30:08,972 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 07:30:16] 2026-01-11 12:30:08,973 | INFO     | traces error code: 0
[2026-01-11 07:30:16] 2026-01-11 12:30:08,973 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 07:30:16] 2026-01-11 12:30:14,703 | INFO     | 6171s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-11 07:30:16] 2026-01-11 12:30:15,830 | INFO     | PID=30838 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 07:30:16] 2026-01-11 12:30:15,830 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 07:30:16] 2026-01-11 12:30:15,830 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 07:30:16] 2026-01-11 12:30:15,830 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 07:30:16] 2026-01-11 12:30:15,830 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 07:30:16] 2026-01-11 12:30:15,830 | CRITICAL | thread 'MainThread' is not alive
[2026-01-11 07:30:16] 2026-01-11 12:30:15,831 | INFO     | [monitor] control thread has ended
[2026-01-11 07:30:16] 2026-01-11 12:30:15,918 [wrapper] ==== pilot stdout END ====
[2026-01-11 07:30:16] 2026-01-11 12:30:15,922 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 07:30:16] 2026-01-11 12:30:15,926 [wrapper] pilotpid: 30838
[2026-01-11 07:30:16] 2026-01-11 12:30:15,930 [wrapper] Pilot exit status: 0
[2026-01-11 07:30:16] 2026-01-11 12:30:15,945 [wrapper] pandaids: 6966153968
[2026-01-11 07:30:16] 2026-01-11 12:30:15,984 [wrapper] cleanup supervisor_pilot  6818 30839
[2026-01-11 07:30:16] 2026-01-11 12:30:15,988 [wrapper] Test setup, not cleaning
[2026-01-11 07:30:16] 2026-01-11 12:30:15,991 [wrapper] apfmon messages muted
[2026-01-11 07:30:16] 2026-01-11 12:30:15,995 [wrapper] ==== wrapper stdout END ====
[2026-01-11 07:30:16] 2026-01-11 12:30:15,999 [wrapper] ==== wrapper stderr END ====
[2026-01-11 07:30:16]  *** Error codes and diagnostics ***
[2026-01-11 07:30:16]     "exeErrorCode": 0,
[2026-01-11 07:30:16]     "exeErrorDiag": "",
[2026-01-11 07:30:16]     "pilotErrorCode": 0,
[2026-01-11 07:30:16]     "pilotErrorDiag": "",
[2026-01-11 07:30:16]  *** Listing of results directory ***
[2026-01-11 07:30:16] total 428016
[2026-01-11 07:30:16] -rw-r--r-- 1 boincer umatlas    579449 Jan 11 05:14 pilot3.tar.gz
[2026-01-11 07:30:16] -rwx------ 1 boincer umatlas     36322 Jan 11 05:46 runpilot2-wrapper.sh
[2026-01-11 07:30:16] -rw-r--r-- 1 boincer umatlas      5112 Jan 11 05:46 queuedata.json
[2026-01-11 07:30:16] -rw-r--r-- 1 boincer umatlas       100 Jan 11 05:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 07:30:16] -rwxr-xr-x 1 boincer umatlas      7986 Jan 11 05:46 run_atlas
[2026-01-11 07:30:16] -rw-r--r-- 1 boincer umatlas       105 Jan 11 05:46 job.xml
[2026-01-11 07:30:16] -rw-r--r-- 2 boincer umatlas 250235096 Jan 11 05:46 EVNT.47929286._000052.pool.root.1
[2026-01-11 07:30:16] -rw-r--r-- 2 boincer umatlas     15847 Jan 11 05:46 start_atlas.sh
[2026-01-11 07:30:16] drwxrwx--x 2 boincer umatlas      4096 Jan 11 05:46 shared
[2026-01-11 07:30:16] -rw-r--r-- 2 boincer umatlas    592405 Jan 11 05:46 input.tar.gz
[2026-01-11 07:30:16] -rw-r--r-- 1 boincer umatlas         0 Jan 11 05:46 boinc_lockfile
[2026-01-11 07:30:16] -rw-r--r-- 1 boincer umatlas      2547 Jan 11 05:46 pandaJob.out
[2026-01-11 07:30:16] -rw------- 1 boincer umatlas        57 Jan 11 05:46 setup.sh.local
[2026-01-11 07:30:16] -rw------- 1 boincer umatlas    989548 Jan 11 05:46 agis_schedconf.cvmfs.json
[2026-01-11 07:30:16] -rw------- 1 boincer umatlas   1516240 Jan 11 05:46 agis_ddmendpoints.agis.ALL.json
[2026-01-11 07:30:16] drwx------ 5 boincer umatlas      4096 Jan 11 05:46 pilot3
[2026-01-11 07:30:16] -rw------- 1 boincer umatlas 181685956 Jan 11 07:29 HITS.47929288._002389.pool.root.1
[2026-01-11 07:30:16] -rw-r--r-- 1 boincer umatlas       529 Jan 11 07:29 boinc_task_state.xml
[2026-01-11 07:30:16] -rw-r--r-- 1 boincer umatlas      5950 Jan 11 07:29 init_data.xml
[2026-01-11 07:30:16] -rw------- 1 boincer umatlas      1046 Jan 11 07:29 memory_monitor_summary.json
[2026-01-11 07:30:16] -rw------- 1 boincer umatlas    339441 Jan 11 07:29 log.47929288._002389.job.log.tgz.1
[2026-01-11 07:30:16] -rw------- 1 boincer umatlas        95 Jan 11 07:29 pilot_heartbeat.json
[2026-01-11 07:30:16] -rw------- 1 boincer umatlas      7844 Jan 11 07:29 heartbeat.json
[2026-01-11 07:30:16] -rw-r--r-- 1 boincer umatlas      8192 Jan 11 07:30 boinc_mmap_file
[2026-01-11 07:30:16] -rw-r--r-- 1 boincer umatlas        27 Jan 11 07:30 wrapper_checkpoint.txt
[2026-01-11 07:30:16] -rw------- 1 boincer umatlas       930 Jan 11 07:30 pilotlog.txt
[2026-01-11 07:30:16] -rw------- 1 boincer umatlas    885832 Jan 11 07:30 log.47929288._002389.job.log.1
[2026-01-11 07:30:16] -rw------- 1 boincer umatlas       357 Jan 11 07:30 output.list
[2026-01-11 07:30:16] -rw-r--r-- 1 boincer umatlas       620 Jan 11 07:30 runtime_log
[2026-01-11 07:30:16] -rw------- 1 boincer umatlas   1249280 Jan 11 07:30 result.tar.gz
[2026-01-11 07:30:16] -rw-r--r-- 1 boincer umatlas      9337 Jan 11 07:30 runtime_log.err
[2026-01-11 07:30:16] -rw------- 1 boincer umatlas       659 Jan 11 07:30 Q87NDmX87y8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmU2mKDm726Lam.diag
[2026-01-11 07:30:16] -rw-r--r-- 1 boincer umatlas     21327 Jan 11 07:30 stderr.txt
[2026-01-11 07:30:16] HITS file was successfully produced:
[2026-01-11 07:30:16] -rw------- 1 boincer umatlas 181685956 Jan 11 07:29 shared/HITS.pool.root.1
[2026-01-11 07:30:16]  *** Contents of shared directory: ***
[2026-01-11 07:30:16] total 423624
[2026-01-11 07:30:16] -rw-r--r-- 2 boincer umatlas 250235096 Jan 11 05:46 ATLAS.root_0
[2026-01-11 07:30:16] -rw-r--r-- 2 boincer umatlas     15847 Jan 11 05:46 start_atlas.sh
[2026-01-11 07:30:16] -rw-r--r-- 2 boincer umatlas    592405 Jan 11 05:46 input.tar.gz
[2026-01-11 07:30:16] -rw------- 1 boincer umatlas 181685956 Jan 11 07:29 HITS.pool.root.1
[2026-01-11 07:30:16] -rw------- 1 boincer umatlas   1249280 Jan 11 07:30 result.tar.gz
07:30:17 (26785): run_atlas exited; CPU time 45569.916707
07:30:17 (26785): called boinc_finish(0)

</stderr_txt>
]]>

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