Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:11:22 (982922): wrapper (7.7.26015): starting
08:11:22 (982922): wrapper: running run_atlas (--nthreads 10)
[2026-01-11 08:11:22] Arguments: --nthreads 10
[2026-01-11 08:11:22] Threads: 10
[2026-01-11 08:11:22] Checking for CVMFS
[2026-01-11 08:11:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 08:11:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 08:11:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 08:11:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 08:11:23] 2.13.3.0 1263916 19846 171532 155017 3 161 34877201 40960000 9344 16776704 0 24288216 99.590 22579371 41866 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-11 08:11:23] CVMFS is ok
[2026-01-11 08:11:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 08:11:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 08:11:23] Further information can be found at the LHC@home message board.
[2026-01-11 08:11:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 08:11:23] Checking for apptainer binary...
[2026-01-11 08:11:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 08:11:23] Running /usr/bin/apptainer --version
[2026-01-11 08:11:23] apptainer version 1.4.5-2.el9
[2026-01-11 08:11:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 08:11:23] c-206-34.aglt2.org
[2026-01-11 08:11:23] apptainer works
[2026-01-11 08:11:23] Set ATHENA_PROC_NUMBER=10
[2026-01-11 08:11:23] Set ATHENA_CORE_NUMBER=10
[2026-01-11 08:11:23] Starting ATLAS job with PandaID=6966143951
[2026-01-11 08:11:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 09:01:25]  *** The last 200 lines of the pilot log: ***
[2026-01-11 09:01:25] 2026-01-11 14:00:16,294 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6966143951/HITS.47962010._003060.pool.root.1 since it does not exist
[2026-01-11 09:01:25] 2026-01-11 14:00:16,578 | INFO     | number of running child processes to parent process 995631: 1
[2026-01-11 09:01:25] 2026-01-11 14:00:16,578 | INFO     | maximum number of monitored processes: 18
[2026-01-11 09:01:25] 2026-01-11 14:00:17,086 | INFO     | time since job start (2882s) is within the limit (349056.0s)
[2026-01-11 09:01:25] 2026-01-11 14:00:17,086 | INFO     | 2888s have passed since pilot start - server update state is 'RUNNING'
[2026-01-11 09:01:25] 2026-01-11 14:00:17,321 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 09:01:25] 2026-01-11 14:00:19,083 | INFO     | monitor loop #217: job 0:6966143951 is in state 'finished'
[2026-01-11 09:01:25] 2026-01-11 14:00:19,083 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 09:01:25] 2026-01-11 14:00:19,093 | INFO     | time since job start (2884s) is within the limit (349056.0s)
[2026-01-11 09:01:25] 2026-01-11 14:00:19,835 | INFO     | job 6966143951 has state=finished
[2026-01-11 09:01:25] 2026-01-11 14:00:19,835 | INFO     | preparing for final server update for job 6966143951 in state='finished'
[2026-01-11 09:01:25] 2026-01-11 14:00:19,836 | INFO     | this job has now completed (state=finished)
[2026-01-11 09:01:25] 2026-01-11 14:00:19,836 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 09:01:25] 2026-01-11 14:00:19,836 | INFO     | log transfer has been attempted: DONE
[2026-01-11 09:01:25] 2026-01-11 14:00:19,836 | INFO     | job 6966143951 has finished - writing final server update
[2026-01-11 09:01:25] 2026-01-11 14:00:19,837 | INFO     | total number of processed events: 50 (read)
[2026-01-11 09:01:25] 2026-01-11 14:00:19,864 | INFO     | executing command: lscpu
[2026-01-11 09:01:25] 2026-01-11 14:00:20,134 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 09:01:25] 2026-01-11 14:00:21,099 | INFO     | time since job start (2886s) is within the limit (349056.0s)
[2026-01-11 09:01:25] 2026-01-11 14:00:21,590 | INFO     | monitor loop #218: job 0:6966143951 is in state 'finished'
[2026-01-11 09:01:25] 2026-01-11 14:00:21,590 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 09:01:25] 2026-01-11 14:00:23,105 | INFO     | time since job start (2888s) is within the limit (349056.0s)
[2026-01-11 09:01:25] 2026-01-11 14:00:24,094 | INFO     | monitor loop #219: job 0:6966143951 is in state 'finished'
[2026-01-11 09:01:25] 2026-01-11 14:00:24,094 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 09:01:25] 2026-01-11 14:00:25,112 | INFO     | time since job start (2890s) is within the limit (349056.0s)
[2026-01-11 09:01:25] 2026-01-11 14:00:26,599 | INFO     | monitor loop #220: job 0:6966143951 is in state 'finished'
[2026-01-11 09:01:25] 2026-01-11 14:00:26,599 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 09:01:25] 2026-01-11 14:00:27,117 | INFO     | time since job start (2892s) is within the limit (349056.0s)
[2026-01-11 09:01:25] 2026-01-11 14:00:29,115 | INFO     | monitor loop #221: job 0:6966143951 is in state 'finished'
[2026-01-11 09:01:25] 2026-01-11 14:00:29,115 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 09:01:25] 2026-01-11 14:00:29,145 | INFO     | PID=986831 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 09:01:25] 2026-01-11 14:00:29,145 | INFO     | .. there are 10 such processes running
[2026-01-11 09:01:25] 2026-01-11 14:00:30,146 | INFO     | time since job start (2895s) is within the limit (349056.0s)
[2026-01-11 09:01:25] 2026-01-11 14:00:31,620 | INFO     | monitor loop #222: job 0:6966143951 is in state 'finished'
[2026-01-11 09:01:25] 2026-01-11 14:00:31,620 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 09:01:25] 2026-01-11 14:00:32,153 | INFO     | time since job start (2897s) is within the limit (349056.0s)
[2026-01-11 09:01:25] 2026-01-11 14:00:34,124 | INFO     | monitor loop #223: job 0:6966143951 is in state 'finished'
[2026-01-11 09:01:25] 2026-01-11 14:00:34,124 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 09:01:25] 2026-01-11 14:00:34,160 | INFO     | time since job start (2899s) is within the limit (349056.0s)
[2026-01-11 09:01:25] 2026-01-11 14:00:35,083 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 09:01:25] 2026-01-11 14:00:35,118 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3289.960203125
[2026-01-11 09:01:25] 2026-01-11 14:00:35,184 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966143951/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 09:01:25] 2026-01-11 14:00:35,185 | INFO     | extracted standard info from prmon json
[2026-01-11 09:01:25] 2026-01-11 14:00:35,185 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 09:01:25] 2026-01-11 14:00:35,185 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 09:01:25] 2026-01-11 14:00:35,215 | INFO     | fitting pss+swap vs Time
[2026-01-11 09:01:25] 2026-01-11 14:00:35,215 | INFO     | sum of square deviations: 18359162.666666664
[2026-01-11 09:01:25] 2026-01-11 14:00:35,215 | INFO     | sum of deviations: 3271190497.0
[2026-01-11 09:01:25] 2026-01-11 14:00:35,215 | INFO     | mean x: 1768138689.3333333
[2026-01-11 09:01:25] 2026-01-11 14:00:35,215 | INFO     | mean y: 2803390.6153846155
[2026-01-11 09:01:25] 2026-01-11 14:00:35,215 | INFO     | intersect: -315039804104.0421
[2026-01-11 09:01:25] 2026-01-11 14:00:35,216 | INFO     | chi2: 0.7791356726644867
[2026-01-11 09:01:25] 2026-01-11 14:00:35,216 | INFO     | current memory leak: 178.18 B/s (using 39 data points, chi2=0.78)
[2026-01-11 09:01:25] 2026-01-11 14:00:35,216 | INFO     | could have reported an average CPU frequency of 3291 MHz (5 samples)
[2026-01-11 09:01:25] 2026-01-11 14:00:35,216 | INFO     | ..............................
[2026-01-11 09:01:25] 2026-01-11 14:00:35,216 | INFO     | . Timing measurements:
[2026-01-11 09:01:25] 2026-01-11 14:00:35,216 | INFO     | . get job = 0 s
[2026-01-11 09:01:25] 2026-01-11 14:00:35,216 | INFO     | . initial setup = 6 s
[2026-01-11 09:01:25] 2026-01-11 14:00:35,216 | INFO     | . payload setup = 22 s
[2026-01-11 09:01:25] 2026-01-11 14:00:35,217 | INFO     | . stage-in = 0 s
[2026-01-11 09:01:25] 2026-01-11 14:00:35,217 | INFO     | . payload execution = 2800 s
[2026-01-11 09:01:25] 2026-01-11 14:00:35,217 | INFO     | . stage-out = 0 s
[2026-01-11 09:01:25] 2026-01-11 14:00:35,217 | INFO     | . log creation = 0 s
[2026-01-11 09:01:25] 2026-01-11 14:00:35,217 | INFO     | ..............................
[2026-01-11 09:01:25] 2026-01-11 14:00:35,791 | INFO     | 
[2026-01-11 09:01:25] 2026-01-11 14:00:35,791 | INFO     | job summary report
[2026-01-11 09:01:25] 2026-01-11 14:00:35,791 | INFO     | --------------------------------------------------
[2026-01-11 09:01:25] 2026-01-11 14:00:35,791 | INFO     | PanDA job id: 6966143951
[2026-01-11 09:01:25] 2026-01-11 14:00:35,791 | INFO     | task id: 47962010
[2026-01-11 09:01:25] 2026-01-11 14:00:35,791 | INFO     | errors: (none)
[2026-01-11 09:01:25] 2026-01-11 14:00:35,791 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 09:01:25] 2026-01-11 14:00:35,791 | INFO     | pilot state: finished 
[2026-01-11 09:01:25] 2026-01-11 14:00:35,792 | INFO     | transexitcode: 0
[2026-01-11 09:01:25] 2026-01-11 14:00:35,792 | INFO     | exeerrorcode: 0
[2026-01-11 09:01:25] 2026-01-11 14:00:35,792 | INFO     | exeerrordiag: 
[2026-01-11 09:01:25] 2026-01-11 14:00:35,792 | INFO     | exitcode: 0
[2026-01-11 09:01:25] 2026-01-11 14:00:35,792 | INFO     | exitmsg: OK
[2026-01-11 09:01:25] 2026-01-11 14:00:35,792 | INFO     | cpuconsumptiontime: 11665 s
[2026-01-11 09:01:25] 2026-01-11 14:00:35,792 | INFO     | nevents: 50
[2026-01-11 09:01:25] 2026-01-11 14:00:35,792 | INFO     | neventsw: 0
[2026-01-11 09:01:25] 2026-01-11 14:00:35,792 | INFO     | pid: 995631
[2026-01-11 09:01:25] 2026-01-11 14:00:35,792 | INFO     | pgrp: 995631
[2026-01-11 09:01:25] 2026-01-11 14:00:35,792 | INFO     | corecount: 10
[2026-01-11 09:01:25] 2026-01-11 14:00:35,792 | INFO     | event service: False
[2026-01-11 09:01:25] 2026-01-11 14:00:35,792 | INFO     | sizes: {0: 2283740, 1: 2284596, 2: 2284596, 12: 2284624, 17: 2284914, 23: 2284942, 2826: 2311148, 2827: 2320142, 2830: 2320226, 2848: 2320504}
[2026-01-11 09:01:25] 2026-01-11 14:00:35,792 | INFO     | --------------------------------------------------
[2026-01-11 09:01:25] 2026-01-11 14:00:35,792 | INFO     | 
[2026-01-11 09:01:25] 2026-01-11 14:00:35,792 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 09:01:25] 2026-01-11 14:00:36,055 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 09:01:25] 2026-01-11 14:00:36,055 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 09:01:25] 2026-01-11 14:00:36,055 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 09:01:25] 2026-01-11 14:00:36,055 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 09:01:25] 2026-01-11 14:00:36,056 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 09:01:25] 2026-01-11 14:00:36,056 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 09:01:25] 2026-01-11 14:00:36,056 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 09:01:25] 2026-01-11 14:00:36,056 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 09:01:25] 2026-01-11 14:00:36,056 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 09:01:25] 2026-01-11 14:00:36,056 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 09:01:25] 2026-01-11 14:00:36,056 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 09:01:25] 2026-01-11 14:00:36,056 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 09:01:25] 2026-01-11 14:00:36,056 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 09:01:25] 2026-01-11 14:00:36,056 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 09:01:25] 2026-01-11 14:00:36,056 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 09:01:25] 2026-01-11 14:00:36,056 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 09:01:25] 2026-01-11 14:00:36,056 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 09:01:25] 2026-01-11 14:00:36,056 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 09:01:25] 2026-01-11 14:00:36,057 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 09:01:25] 2026-01-11 14:00:36,057 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 09:01:25] 2026-01-11 14:00:36,057 | INFO     | job 6966143951 has completed (purged errors)
[2026-01-11 09:01:25] 2026-01-11 14:00:36,057 | INFO     | overall cleanup function is called
[2026-01-11 09:01:25] 2026-01-11 14:00:37,075 | INFO     | --- collectZombieJob: --- 10, [995631]
[2026-01-11 09:01:25] 2026-01-11 14:00:37,075 | INFO     | zombie collector waiting for pid 995631
[2026-01-11 09:01:25] 2026-01-11 14:00:37,075 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 09:01:25] 2026-01-11 14:00:37,075 | INFO     | collected zombie processes
[2026-01-11 09:01:25] 2026-01-11 14:00:37,075 | INFO     | will attempt to kill all subprocesses of pid=995631
[2026-01-11 09:01:25] 2026-01-11 14:00:37,458 | INFO     | process IDs to be killed: [995631] (in reverse order)
[2026-01-11 09:01:25] 2026-01-11 14:00:37,596 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 09:01:25] 2026-01-11 14:00:37,597 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 09:01:25] 2026-01-11 14:00:37,608 | INFO     | did not find any defunct processes belonging to 995631
[2026-01-11 09:01:25] 2026-01-11 14:00:37,617 | INFO     | did not find any defunct processes belonging to 995631
[2026-01-11 09:01:25] 2026-01-11 14:00:37,618 | INFO     | ready for new job
[2026-01-11 09:01:25] 2026-01-11 14:00:37,618 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 09:01:25] 2026-01-11 14:00:37,620 | INFO     | ***************************************
[2026-01-11 09:01:25] 2026-01-11 14:00:37,620 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 09:01:25] 2026-01-11 14:00:37,620 | INFO     | ***************************************
[2026-01-11 09:01:25] 2026-01-11 14:00:37,620 | INFO     | 
[2026-01-11 09:01:25] 2026-01-11 14:00:37,626 | INFO     | architecture information:
[2026-01-11 09:01:25] 2026-01-11 14:00:37,627 | INFO     | executing command: cat /etc/os-release
[2026-01-11 09:01:25] 2026-01-11 14:00:37,644 | INFO     | cat /etc/os-release:
[2026-01-11 09:01:25] NAME="CentOS Linux"
[2026-01-11 09:01:25] VERSION="7 (Core)"
[2026-01-11 09:01:25] ID="centos"
[2026-01-11 09:01:25] ID_LIKE="rhel fedora"
[2026-01-11 09:01:25] VERSION_ID="7"
[2026-01-11 09:01:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 09:01:25] ANSI_COLOR="0;31"
[2026-01-11 09:01:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 09:01:25] HOME_URL="https://www.centos.org/"
[2026-01-11 09:01:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 09:01:25] 
[2026-01-11 09:01:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 09:01:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 09:01:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 09:01:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 09:01:25] 
[2026-01-11 09:01:25] 2026-01-11 14:00:37,644 | INFO     | ***************************************
[2026-01-11 09:01:25] 2026-01-11 14:00:38,147 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 09:01:25] 2026-01-11 14:00:38,175 | INFO     | sufficient remaining disk space (84709212160 B)
[2026-01-11 09:01:25] 2026-01-11 14:00:38,176 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 09:01:25] 2026-01-11 14:00:38,176 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 09:01:25] 2026-01-11 14:00:38,176 | INFO     | update_server=False
[2026-01-11 09:01:25] 2026-01-11 14:00:38,176 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 09:01:25] 2026-01-11 14:00:38,180 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 09:01:25] 2026-01-11 14:00:38,181 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 09:01:25] 2026-01-11 14:00:38,181 | INFO     | aborting loop
[2026-01-11 09:01:25] 2026-01-11 14:00:38,229 | INFO     | all job control threads have been joined
[2026-01-11 09:01:25] 2026-01-11 14:00:38,736 | INFO     | all payload control threads have been joined
[2026-01-11 09:01:25] 2026-01-11 14:00:38,930 | INFO     | all data control threads have been joined
[2026-01-11 09:01:25] 2026-01-11 14:00:39,182 | INFO     | [job] retrieve thread has finished
[2026-01-11 09:01:25] 2026-01-11 14:00:39,187 | INFO     | [job] job monitor thread has finished
[2026-01-11 09:01:25] 2026-01-11 14:00:39,233 | INFO     | [job] control thread has finished
[2026-01-11 09:01:25] 2026-01-11 14:00:39,344 | INFO     | [data] copytool_in thread has finished
[2026-01-11 09:01:25] 2026-01-11 14:00:39,742 | INFO     | [payload] control thread has finished
[2026-01-11 09:01:25] 2026-01-11 14:00:39,834 | INFO     | [payload] failed_post thread has finished
[2026-01-11 09:01:25] 2026-01-11 14:00:39,858 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 09:01:25] 2026-01-11 14:00:39,885 | INFO     | [job] validate thread has finished
[2026-01-11 09:01:25] 2026-01-11 14:00:39,936 | INFO     | [data] control thread has finished
[2026-01-11 09:01:25] 2026-01-11 14:00:40,169 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 09:01:25] 2026-01-11 14:00:40,187 | INFO     | [data] copytool_out thread has finished
[2026-01-11 09:01:25] 2026-01-11 14:00:40,342 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 09:01:25] 2026-01-11 14:00:40,349 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 09:01:25] 2026-01-11 14:00:40,640 | INFO     | [payload] validate_post thread has finished
[2026-01-11 09:01:25] 2026-01-11 14:00:41,349 | INFO     | [job] queue monitor thread has finished
[2026-01-11 09:01:25] 2026-01-11 14:00:41,470 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 09:01:25] 2026-01-11 14:00:45,478 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 09:01:25] 2026-01-11 14:00:48,655 | INFO     | job.realtimelogging is not enabled
[2026-01-11 09:01:25] 2026-01-11 14:00:49,661 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 09:01:25] 2026-01-11 14:01:07,627 | INFO     | PID=986831 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 09:01:25] 2026-01-11 14:01:07,627 | INFO     | .. there are 10 such processes running
[2026-01-11 09:01:25] 2026-01-11 14:01:07,629 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 09:01:25] 2026-01-11 14:01:07,629 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 09:01:25] 2026-01-11 14:01:07,629 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 09:01:25] 2026-01-11 14:01:20,043 | INFO     | [monitor] cgroup control has ended
[2026-01-11 09:01:25] 2026-01-11 14:01:20,472 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140607522293568)>', '<ExcThread(monitor, started 140607248897792)>']
[2026-01-11 09:01:25] 2026-01-11 14:01:20,706 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 09:01:25] 2026-01-11 14:01:20,706 | INFO     | [monitor] control thread has ended
[2026-01-11 09:01:25] 2026-01-11 14:01:25,498 | INFO     | all workflow threads have been joined
[2026-01-11 09:01:25] 2026-01-11 14:01:25,498 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 09:01:25] 2026-01-11 14:01:25,498 | INFO     | traces error code: 0
[2026-01-11 09:01:25] 2026-01-11 14:01:25,498 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 09:01:25] 2026-01-11 14:01:25,595 [wrapper] ==== pilot stdout END ====
[2026-01-11 09:01:25] 2026-01-11 14:01:25,597 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 09:01:25] 2026-01-11 14:01:25,598 [wrapper] pilotpid: 986831
[2026-01-11 09:01:25] 2026-01-11 14:01:25,600 [wrapper] Pilot exit status: 0
[2026-01-11 09:01:25] 2026-01-11 14:01:25,609 [wrapper] pandaids: 6966143951
[2026-01-11 09:01:25] 2026-01-11 14:01:25,672 [wrapper] cleanup supervisor_pilot 1070846 986832
[2026-01-11 09:01:25] 2026-01-11 14:01:25,674 [wrapper] Test setup, not cleaning
[2026-01-11 09:01:25] 2026-01-11 14:01:25,675 [wrapper] apfmon messages muted
[2026-01-11 09:01:25] 2026-01-11 14:01:25,677 [wrapper] ==== wrapper stdout END ====
[2026-01-11 09:01:25] 2026-01-11 14:01:25,679 [wrapper] ==== wrapper stderr END ====
[2026-01-11 09:01:25]  *** Error codes and diagnostics ***
[2026-01-11 09:01:25]     "exeErrorCode": 0,
[2026-01-11 09:01:25]     "exeErrorDiag": "",
[2026-01-11 09:01:25]     "pilotErrorCode": 0,
[2026-01-11 09:01:25]     "pilotErrorDiag": "",
[2026-01-11 09:01:25]  *** Listing of results directory ***
[2026-01-11 09:01:25] total 434128
[2026-01-11 09:01:25] -rw-r--r--. 1 boincer umatlas    579449 Jan 11 05:14 pilot3.tar.gz
[2026-01-11 09:01:25] -rw-r--r--. 1 boincer umatlas      5112 Jan 11 05:17 queuedata.json
[2026-01-11 09:01:25] -rwx------. 1 boincer umatlas     36322 Jan 11 05:18 runpilot2-wrapper.sh
[2026-01-11 09:01:25] -rw-r--r--. 1 boincer umatlas       100 Jan 11 08:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 09:01:25] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 08:11 run_atlas
[2026-01-11 09:01:25] -rw-r--r--. 1 boincer umatlas       105 Jan 11 08:11 job.xml
[2026-01-11 09:01:25] -rw-r--r--. 2 boincer umatlas 393201107 Jan 11 08:11 EVNT.47962006._000031.pool.root.1
[2026-01-11 09:01:25] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 08:11 start_atlas.sh
[2026-01-11 09:01:25] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 08:11 shared
[2026-01-11 09:01:25] -rw-r--r--. 2 boincer umatlas    592614 Jan 11 08:11 input.tar.gz
[2026-01-11 09:01:25] -rw-r--r--. 1 boincer umatlas         0 Jan 11 08:11 boinc_lockfile
[2026-01-11 09:01:25] -rw-r--r--. 1 boincer umatlas      2889 Jan 11 08:11 pandaJob.out
[2026-01-11 09:01:25] -rw-------. 1 boincer umatlas        57 Jan 11 08:11 setup.sh.local
[2026-01-11 09:01:25] -rw-------. 1 boincer umatlas    989548 Jan 11 08:12 agis_schedconf.cvmfs.json
[2026-01-11 09:01:25] -rw-------. 1 boincer umatlas   1516240 Jan 11 08:12 agis_ddmendpoints.agis.ALL.json
[2026-01-11 09:01:25] drwx------. 5 boincer umatlas      4096 Jan 11 08:12 pilot3
[2026-01-11 09:01:25] -rw-r--r--. 1 boincer umatlas       530 Jan 11 08:53 boinc_task_state.xml
[2026-01-11 09:01:25] -rw-r--r--. 1 boincer umatlas      6907 Jan 11 08:55 init_data.xml
[2026-01-11 09:01:25] -rw-------. 1 boincer umatlas  43758639 Jan 11 09:00 HITS.47962010._003060.pool.root.1
[2026-01-11 09:01:25] -rw-------. 1 boincer umatlas      1032 Jan 11 09:00 memory_monitor_summary.json
[2026-01-11 09:01:25] -rw-------. 1 boincer umatlas   1383796 Jan 11 09:00 log.47962010._003060.job.log.tgz.1
[2026-01-11 09:01:25] -rw-------. 1 boincer umatlas      8532 Jan 11 09:00 heartbeat.json
[2026-01-11 09:01:25] -rw-------. 1 boincer umatlas        95 Jan 11 09:01 pilot_heartbeat.json
[2026-01-11 09:01:25] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 09:01 boinc_mmap_file
[2026-01-11 09:01:25] -rw-r--r--. 1 boincer umatlas        27 Jan 11 09:01 wrapper_checkpoint.txt
[2026-01-11 09:01:25] -rw-------. 1 boincer umatlas      4895 Jan 11 09:01 pilotlog.txt
[2026-01-11 09:01:25] -rw-------. 1 boincer umatlas    447321 Jan 11 09:01 log.47962010._003060.job.log.1
[2026-01-11 09:01:25] -rw-------. 1 boincer umatlas       353 Jan 11 09:01 output.list
[2026-01-11 09:01:25] -rw-r--r--. 1 boincer umatlas       620 Jan 11 09:01 runtime_log
[2026-01-11 09:01:25] -rw-------. 1 boincer umatlas   1853440 Jan 11 09:01 result.tar.gz
[2026-01-11 09:01:25] -rw-r--r--. 1 boincer umatlas      9344 Jan 11 09:01 runtime_log.err
[2026-01-11 09:01:25] -rw-------. 1 boincer umatlas       652 Jan 11 09:01 j68LDmhh7y8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmS2mKDmqqeOJo.diag
[2026-01-11 09:01:25] -rw-r--r--. 1 boincer umatlas     22449 Jan 11 09:01 stderr.txt
[2026-01-11 09:01:25] HITS file was successfully produced:
[2026-01-11 09:01:25] -rw-------. 1 boincer umatlas 43758639 Jan 11 09:00 shared/HITS.pool.root.1
[2026-01-11 09:01:25]  *** Contents of shared directory: ***
[2026-01-11 09:01:25] total 429136
[2026-01-11 09:01:25] -rw-r--r--. 2 boincer umatlas 393201107 Jan 11 08:11 ATLAS.root_0
[2026-01-11 09:01:25] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 08:11 start_atlas.sh
[2026-01-11 09:01:25] -rw-r--r--. 2 boincer umatlas    592614 Jan 11 08:11 input.tar.gz
[2026-01-11 09:01:25] -rw-------. 1 boincer umatlas  43758639 Jan 11 09:00 HITS.pool.root.1
[2026-01-11 09:01:25] -rw-------. 1 boincer umatlas   1853440 Jan 11 09:01 result.tar.gz
09:01:27 (982922): run_atlas exited; CPU time 11603.049633
09:01:27 (982922): called boinc_finish(0)

</stderr_txt>
]]>

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