Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:19:05 (1701835): wrapper (7.7.26015): starting
05:19:05 (1701835): wrapper: running run_atlas (--nthreads 9)
[2026-01-11 05:19:05] Arguments: --nthreads 9
[2026-01-11 05:19:05] Threads: 9
[2026-01-11 05:19:05] Checking for CVMFS
[2026-01-11 05:19:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 05:19:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 05:19:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 05:19:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 05:19:06] 2.13.3.0 11959 96162 358848 155013 3 331 25977551 32935937 19895 16776704 0 400603205 99.493 555765111 34150 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-11 05:19:06] CVMFS is ok
[2026-01-11 05:19:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 05:19:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 05:19:06] Further information can be found at the LHC@home message board.
[2026-01-11 05:19:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 05:19:06] Checking for apptainer binary...
[2026-01-11 05:19:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 05:19:06] Running /usr/bin/apptainer --version
[2026-01-11 05:19:06] apptainer version 1.4.5-2.el9
[2026-01-11 05:19:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 05:19:06] c6-8-25-4.aglt2.org
[2026-01-11 05:19:06] apptainer works
[2026-01-11 05:19:06] Set ATHENA_PROC_NUMBER=9
[2026-01-11 05:19:06] Set ATHENA_CORE_NUMBER=9
[2026-01-11 05:19:06] Starting ATLAS job with PandaID=6966143925
[2026-01-11 05:19:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 06:34:33]  *** The last 200 lines of the pilot log: ***
[2026-01-11 06:34:33]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6966143925/log.47962010._003034.job.log.tgz.1
[2026-01-11 06:34:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/9c/9e/log.47962010._003034.job.log.tgz.1
[2026-01-11 06:34:33]  workdir=None
[2026-01-11 06:34:33] ]
[2026-01-11 06:34:33] 2026-01-11 11:33:33,472 | INFO     | transferring file log.47962010._003034.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6966143925/log.47962010._003034.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-11 06:34:33] 2026-01-11 11:33:33,473 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6966143925/log.47962010._003034.job.log.tgz.1 /tmp/boinchome/slots/1/log.47962010._003034.job
[2026-01-11 06:34:33] 2026-01-11 11:33:33,568 | INFO     | adding to output.list: log.47962010._003034.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/9c/9e/log.47962010._003034.job.log.tgz.
[2026-01-11 06:34:33] 2026-01-11 11:33:33,569 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 06:34:33] 2026-01-11 11:33:33,569 | INFO     | summary of transferred files:
[2026-01-11 06:34:33] 2026-01-11 11:33:33,569 | INFO     |  -- lfn=log.47962010._003034.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 06:34:33] 2026-01-11 11:33:33,570 | INFO     | stage-out finished correctly
[2026-01-11 06:34:33] 2026-01-11 11:33:33,823 | INFO     | PID=1712717 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-11 06:34:33] 2026-01-11 11:33:33,823 | INFO     | .. there are 22 such processes running
[2026-01-11 06:34:33] 2026-01-11 11:33:34,237 | WARNING  | process 1732538 can no longer be monitored (due to stat problems) - aborting
[2026-01-11 06:34:33] 2026-01-11 11:33:34,238 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6966143925/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 06:34:33] 2026-01-11 11:33:34,521 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 06:34:33] 2026-01-11 11:33:34,827 | INFO     | time since job start (4455s) is within the limit (349056.0s)
[2026-01-11 06:34:33] 2026-01-11 11:33:36,009 | INFO     | number of running child processes to parent process 1732538: 1
[2026-01-11 06:34:33] 2026-01-11 11:33:36,009 | INFO     | maximum number of monitored processes: 15
[2026-01-11 06:34:33] 2026-01-11 11:33:36,658 | INFO     | job 6966143925 has state=finished
[2026-01-11 06:34:33] 2026-01-11 11:33:36,658 | INFO     | preparing for final server update for job 6966143925 in state='finished'
[2026-01-11 06:34:33] 2026-01-11 11:33:36,659 | INFO     | this job has now completed (state=finished)
[2026-01-11 06:34:33] 2026-01-11 11:33:36,659 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 06:34:33] 2026-01-11 11:33:36,659 | INFO     | log transfer has been attempted: DONE
[2026-01-11 06:34:33] 2026-01-11 11:33:36,659 | INFO     | job 6966143925 has finished - writing final server update
[2026-01-11 06:34:33] 2026-01-11 11:33:36,659 | INFO     | total number of processed events: 50 (read)
[2026-01-11 06:34:33] 2026-01-11 11:33:36,682 | INFO     | executing command: lscpu
[2026-01-11 06:34:33] 2026-01-11 11:33:36,869 | INFO     | time since job start (4457s) is within the limit (349056.0s)
[2026-01-11 06:34:33] 2026-01-11 11:33:36,915 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 06:34:33] 2026-01-11 11:33:38,537 | INFO     | monitor loop #259: job 0:6966143925 is in state 'finished'
[2026-01-11 06:34:33] 2026-01-11 11:33:38,543 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 06:34:33] 2026-01-11 11:33:38,876 | INFO     | time since job start (4459s) is within the limit (349056.0s)
[2026-01-11 06:34:33] 2026-01-11 11:33:40,883 | INFO     | time since job start (4461s) is within the limit (349056.0s)
[2026-01-11 06:34:33] 2026-01-11 11:33:41,070 | INFO     | monitor loop #260: job 0:6966143925 is in state 'finished'
[2026-01-11 06:34:33] 2026-01-11 11:33:41,070 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 06:34:33] 2026-01-11 11:33:42,902 | INFO     | time since job start (4463s) is within the limit (349056.0s)
[2026-01-11 06:34:33] 2026-01-11 11:33:43,575 | INFO     | monitor loop #261: job 0:6966143925 is in state 'finished'
[2026-01-11 06:34:33] 2026-01-11 11:33:43,575 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 06:34:33] 2026-01-11 11:33:44,909 | INFO     | time since job start (4465s) is within the limit (349056.0s)
[2026-01-11 06:34:33] 2026-01-11 11:33:45,097 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 06:34:33] 2026-01-11 11:33:45,110 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2705.946499999999
[2026-01-11 06:34:33] 2026-01-11 11:33:45,128 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6966143925/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 06:34:33] 2026-01-11 11:33:45,129 | INFO     | extracted standard info from prmon json
[2026-01-11 06:34:33] 2026-01-11 11:33:45,129 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 06:34:33] 2026-01-11 11:33:45,129 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 06:34:33] 2026-01-11 11:33:45,131 | INFO     | fitting pss+swap vs Time
[2026-01-11 06:34:33] 2026-01-11 11:33:45,132 | INFO     | sum of square deviations: 89141542.25757563
[2026-01-11 06:34:33] 2026-01-11 11:33:45,132 | INFO     | sum of deviations: 4328205851.666668
[2026-01-11 06:34:33] 2026-01-11 11:33:45,132 | INFO     | mean x: 1768129084.560606
[2026-01-11 06:34:33] 2026-01-11 11:33:45,132 | INFO     | mean y: 2552802.3333333335
[2026-01-11 06:34:33] 2026-01-11 11:33:45,132 | INFO     | intersect: -85847730426.82938
[2026-01-11 06:34:33] 2026-01-11 11:33:45,133 | INFO     | chi2: 0.8572955360200647
[2026-01-11 06:34:33] 2026-01-11 11:33:45,133 | INFO     | current memory leak: 48.55 B/s (using 66 data points, chi2=0.86)
[2026-01-11 06:34:33] 2026-01-11 11:33:45,133 | INFO     | could have reported an average CPU frequency of 2672 MHz (6 samples)
[2026-01-11 06:34:33] 2026-01-11 11:33:45,133 | INFO     | ..............................
[2026-01-11 06:34:33] 2026-01-11 11:33:45,133 | INFO     | . Timing measurements:
[2026-01-11 06:34:33] 2026-01-11 11:33:45,133 | INFO     | . get job = 0 s
[2026-01-11 06:34:33] 2026-01-11 11:33:45,133 | INFO     | . initial setup = 2 s
[2026-01-11 06:34:33] 2026-01-11 11:33:45,134 | INFO     | . payload setup = 6 s
[2026-01-11 06:34:33] 2026-01-11 11:33:45,134 | INFO     | . stage-in = 0 s
[2026-01-11 06:34:33] 2026-01-11 11:33:45,134 | INFO     | . payload execution = 4423 s
[2026-01-11 06:34:33] 2026-01-11 11:33:45,134 | INFO     | . stage-out = 2 s
[2026-01-11 06:34:33] 2026-01-11 11:33:45,134 | INFO     | . log creation = 0 s
[2026-01-11 06:34:33] 2026-01-11 11:33:45,134 | INFO     | ..............................
[2026-01-11 06:34:33] 2026-01-11 11:33:45,234 | INFO     | 
[2026-01-11 06:34:33] 2026-01-11 11:33:45,234 | INFO     | job summary report
[2026-01-11 06:34:33] 2026-01-11 11:33:45,234 | INFO     | --------------------------------------------------
[2026-01-11 06:34:33] 2026-01-11 11:33:45,235 | INFO     | PanDA job id: 6966143925
[2026-01-11 06:34:33] 2026-01-11 11:33:45,235 | INFO     | task id: 47962010
[2026-01-11 06:34:33] 2026-01-11 11:33:45,235 | INFO     | errors: (none)
[2026-01-11 06:34:33] 2026-01-11 11:33:45,235 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 06:34:33] 2026-01-11 11:33:45,235 | INFO     | pilot state: finished 
[2026-01-11 06:34:33] 2026-01-11 11:33:45,235 | INFO     | transexitcode: 0
[2026-01-11 06:34:33] 2026-01-11 11:33:45,235 | INFO     | exeerrorcode: 0
[2026-01-11 06:34:33] 2026-01-11 11:33:45,235 | INFO     | exeerrordiag: 
[2026-01-11 06:34:33] 2026-01-11 11:33:45,235 | INFO     | exitcode: 0
[2026-01-11 06:34:33] 2026-01-11 11:33:45,235 | INFO     | exitmsg: OK
[2026-01-11 06:34:33] 2026-01-11 11:33:45,235 | INFO     | cpuconsumptiontime: 14926 s
[2026-01-11 06:34:33] 2026-01-11 11:33:45,235 | INFO     | nevents: 50
[2026-01-11 06:34:33] 2026-01-11 11:33:45,235 | INFO     | neventsw: 0
[2026-01-11 06:34:33] 2026-01-11 11:33:45,235 | INFO     | pid: 1732538
[2026-01-11 06:34:33] 2026-01-11 11:33:45,236 | INFO     | pgrp: 1732538
[2026-01-11 06:34:33] 2026-01-11 11:33:45,236 | INFO     | corecount: 9
[2026-01-11 06:34:33] 2026-01-11 11:33:45,236 | INFO     | event service: False
[2026-01-11 06:34:33] 2026-01-11 11:33:45,236 | INFO     | sizes: {0: 2283740, 1: 2284596, 6: 2284858, 12: 2284886, 4434: 2311523, 4438: 2320517, 4439: 2320701, 4449: 2320947}
[2026-01-11 06:34:33] 2026-01-11 11:33:45,236 | INFO     | --------------------------------------------------
[2026-01-11 06:34:33] 2026-01-11 11:33:45,236 | INFO     | 
[2026-01-11 06:34:33] 2026-01-11 11:33:45,236 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-11 06:34:33] 2026-01-11 11:33:45,256 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 06:34:33] 2026-01-11 11:33:45,257 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 06:34:33] 2026-01-11 11:33:45,257 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 06:34:33] 2026-01-11 11:33:45,257 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 06:34:33] 2026-01-11 11:33:45,257 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 06:34:33] 2026-01-11 11:33:45,257 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 06:34:33] 2026-01-11 11:33:45,257 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 06:34:33] 2026-01-11 11:33:45,257 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 06:34:33] 2026-01-11 11:33:45,257 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 06:34:33] 2026-01-11 11:33:45,257 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 06:34:33] 2026-01-11 11:33:45,257 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 06:34:33] 2026-01-11 11:33:45,257 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 06:34:33] 2026-01-11 11:33:45,257 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 06:34:33] 2026-01-11 11:33:45,258 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 06:34:33] 2026-01-11 11:33:45,258 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 06:34:33] 2026-01-11 11:33:45,258 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 06:34:33] 2026-01-11 11:33:45,258 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 06:34:33] 2026-01-11 11:33:45,258 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 06:34:33] 2026-01-11 11:33:45,258 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 06:34:33] 2026-01-11 11:33:45,258 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 06:34:33] 2026-01-11 11:33:45,258 | INFO     | job 6966143925 has completed (purged errors)
[2026-01-11 06:34:33] 2026-01-11 11:33:45,258 | INFO     | overall cleanup function is called
[2026-01-11 06:34:33] 2026-01-11 11:33:46,273 | INFO     | --- collectZombieJob: --- 10, [1732538]
[2026-01-11 06:34:33] 2026-01-11 11:33:46,273 | INFO     | zombie collector waiting for pid 1732538
[2026-01-11 06:34:33] 2026-01-11 11:33:46,273 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 06:34:33] 2026-01-11 11:33:46,273 | INFO     | collected zombie processes
[2026-01-11 06:34:33] 2026-01-11 11:33:46,273 | INFO     | will attempt to kill all subprocesses of pid=1732538
[2026-01-11 06:34:33] 2026-01-11 11:33:46,677 | INFO     | process IDs to be killed: [1732538] (in reverse order)
[2026-01-11 06:34:33] 2026-01-11 11:33:46,817 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 06:34:33] 2026-01-11 11:33:46,817 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 06:34:33] 2026-01-11 11:33:46,856 | INFO     | did not find any defunct processes belonging to 1732538
[2026-01-11 06:34:33] 2026-01-11 11:33:46,890 | INFO     | did not find any defunct processes belonging to 1732538
[2026-01-11 06:34:33] 2026-01-11 11:33:46,891 | INFO     | ready for new job
[2026-01-11 06:34:33] 2026-01-11 11:33:46,891 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 06:34:33] 2026-01-11 11:33:46,892 | INFO     | ***************************************
[2026-01-11 06:34:33] 2026-01-11 11:33:46,893 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 06:34:33] 2026-01-11 11:33:46,893 | INFO     | ***************************************
[2026-01-11 06:34:33] 2026-01-11 11:33:46,893 | INFO     | 
[2026-01-11 06:34:33] 2026-01-11 11:33:46,898 | INFO     | architecture information:
[2026-01-11 06:34:33] 2026-01-11 11:33:46,899 | INFO     | executing command: cat /etc/os-release
[2026-01-11 06:34:33] 2026-01-11 11:33:46,919 | INFO     | cat /etc/os-release:
[2026-01-11 06:34:33] NAME="CentOS Linux"
[2026-01-11 06:34:33] VERSION="7 (Core)"
[2026-01-11 06:34:33] ID="centos"
[2026-01-11 06:34:33] ID_LIKE="rhel fedora"
[2026-01-11 06:34:33] VERSION_ID="7"
[2026-01-11 06:34:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 06:34:33] ANSI_COLOR="0;31"
[2026-01-11 06:34:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 06:34:33] HOME_URL="https://www.centos.org/"
[2026-01-11 06:34:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 06:34:33] 
[2026-01-11 06:34:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 06:34:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 06:34:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 06:34:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 06:34:33] 
[2026-01-11 06:34:33] 2026-01-11 11:33:46,919 | INFO     | ***************************************
[2026-01-11 06:34:33] 2026-01-11 11:33:47,423 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-11 06:34:33] 2026-01-11 11:33:47,455 | INFO     | sufficient remaining disk space (74706845696 B)
[2026-01-11 06:34:33] 2026-01-11 11:33:47,456 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 06:34:33] 2026-01-11 11:33:47,456 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 06:34:33] 2026-01-11 11:33:47,456 | INFO     | update_server=False
[2026-01-11 06:34:33] 2026-01-11 11:33:47,456 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 06:34:33] 2026-01-11 11:33:47,456 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 06:34:33] 2026-01-11 11:33:47,456 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 06:34:33] 2026-01-11 11:33:47,456 | INFO     | aborting loop
[2026-01-11 06:34:33] 2026-01-11 11:33:47,665 | INFO     | all data control threads have been joined
[2026-01-11 06:34:33] 2026-01-11 11:33:48,377 | INFO     | all payload control threads have been joined
[2026-01-11 06:34:33] 2026-01-11 11:33:48,462 | INFO     | [job] retrieve thread has finished
[2026-01-11 06:34:33] 2026-01-11 11:33:48,467 | INFO     | [job] job monitor thread has finished
[2026-01-11 06:34:33] 2026-01-11 11:33:48,553 | INFO     | [data] copytool_in thread has finished
[2026-01-11 06:34:33] 2026-01-11 11:33:48,671 | INFO     | [data] control thread has finished
[2026-01-11 06:34:33] 2026-01-11 11:33:48,672 | INFO     | [payload] failed_post thread has finished
[2026-01-11 06:34:33] 2026-01-11 11:33:48,740 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 06:34:33] 2026-01-11 11:33:48,753 | INFO     | [payload] validate_post thread has finished
[2026-01-11 06:34:33] 2026-01-11 11:33:49,054 | INFO     | all job control threads have been joined
[2026-01-11 06:34:33] 2026-01-11 11:33:49,091 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 06:34:33] 2026-01-11 11:33:49,280 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 06:34:33] 2026-01-11 11:33:49,303 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 06:34:33] 2026-01-11 11:33:49,384 | INFO     | [payload] control thread has finished
[2026-01-11 06:34:33] 2026-01-11 11:33:49,483 | INFO     | [data] copytool_out thread has finished
[2026-01-11 06:34:33] 2026-01-11 11:33:49,738 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 06:34:33] 2026-01-11 11:33:49,919 | INFO     | [job] validate thread has finished
[2026-01-11 06:34:33] 2026-01-11 11:33:50,063 | INFO     | [job] control thread has finished
[2026-01-11 06:34:33] 2026-01-11 11:33:50,249 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 06:34:33] 2026-01-11 11:33:51,255 | INFO     | [job] queue monitor thread has finished
[2026-01-11 06:34:33] 2026-01-11 11:33:53,747 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 06:34:33] 2026-01-11 11:34:16,213 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-01-11 06:34:33] 2026-01-11 11:34:18,594 | INFO     | PID=1712717 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 06:34:33] 2026-01-11 11:34:18,594 | INFO     | .. there are 22 such processes running
[2026-01-11 06:34:33] 2026-01-11 11:34:18,595 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 06:34:33] 2026-01-11 11:34:18,595 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 06:34:33] 2026-01-11 11:34:18,595 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 06:34:33] 2026-01-11 11:34:26,738 | INFO     | [monitor] cgroup control has ended
[2026-01-11 06:34:33] 2026-01-11 11:34:27,583 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139897925527360)>', '<ExcThread(monitor, started 139897176303360)>']
[2026-01-11 06:34:33] 2026-01-11 11:34:27,663 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 06:34:33] 2026-01-11 11:34:27,663 | INFO     | [monitor] control thread has ended
[2026-01-11 06:34:33] 2026-01-11 11:34:32,613 | INFO     | all workflow threads have been joined
[2026-01-11 06:34:33] 2026-01-11 11:34:32,618 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 06:34:33] 2026-01-11 11:34:32,618 | INFO     | traces error code: 0
[2026-01-11 06:34:33] 2026-01-11 11:34:32,618 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 06:34:33] 2026-01-11 11:34:32,806 [wrapper] ==== pilot stdout END ====
[2026-01-11 06:34:33] 2026-01-11 11:34:32,814 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 06:34:33] 2026-01-11 11:34:32,827 [wrapper] pilotpid: 1712717
[2026-01-11 06:34:33] 2026-01-11 11:34:32,838 [wrapper] Pilot exit status: 0
[2026-01-11 06:34:33] 2026-01-11 11:34:32,864 [wrapper] pandaids: 6966143925
[2026-01-11 06:34:33] 2026-01-11 11:34:32,986 [wrapper] cleanup supervisor_pilot 1950309 1712720
[2026-01-11 06:34:33] 2026-01-11 11:34:32,989 [wrapper] Test setup, not cleaning
[2026-01-11 06:34:33] 2026-01-11 11:34:32,991 [wrapper] apfmon messages muted
[2026-01-11 06:34:33] 2026-01-11 11:34:32,993 [wrapper] ==== wrapper stdout END ====
[2026-01-11 06:34:33] 2026-01-11 11:34:32,995 [wrapper] ==== wrapper stderr END ====
[2026-01-11 06:34:33]  *** Error codes and diagnostics ***
[2026-01-11 06:34:33]     "exeErrorCode": 0,
[2026-01-11 06:34:33]     "exeErrorDiag": "",
[2026-01-11 06:34:33]     "pilotErrorCode": 0,
[2026-01-11 06:34:33]     "pilotErrorDiag": "",
[2026-01-11 06:34:33]  *** Listing of results directory ***
[2026-01-11 06:34:33] total 431336
[2026-01-11 06:34:33] -rw-r--r--. 1 boincer umatlas    579449 Jan 11 05:14 pilot3.tar.gz
[2026-01-11 06:34:33] -rw-r--r--. 1 boincer umatlas      5112 Jan 11 05:17 queuedata.json
[2026-01-11 06:34:33] -rwx------. 1 boincer umatlas     36322 Jan 11 05:18 runpilot2-wrapper.sh
[2026-01-11 06:34:33] -rw-r--r--. 1 boincer umatlas       100 Jan 11 05:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 06:34:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 05:19 run_atlas
[2026-01-11 06:34:33] -rw-r--r--. 1 boincer umatlas       105 Jan 11 05:19 job.xml
[2026-01-11 06:34:33] -rw-r--r--. 2 boincer umatlas 390503703 Jan 11 05:19 EVNT.47962006._000011.pool.root.1
[2026-01-11 06:34:33] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 05:19 start_atlas.sh
[2026-01-11 06:34:33] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 05:19 shared
[2026-01-11 06:34:33] -rw-r--r--. 2 boincer umatlas    592609 Jan 11 05:19 input.tar.gz
[2026-01-11 06:34:33] -rw-r--r--. 1 boincer umatlas         0 Jan 11 05:19 boinc_lockfile
[2026-01-11 06:34:33] -rw-r--r--. 1 boincer umatlas      2889 Jan 11 05:19 pandaJob.out
[2026-01-11 06:34:33] -rw-------. 1 boincer umatlas        57 Jan 11 05:19 setup.sh.local
[2026-01-11 06:34:33] -rw-------. 1 boincer umatlas    989548 Jan 11 05:19 agis_schedconf.cvmfs.json
[2026-01-11 06:34:33] -rw-------. 1 boincer umatlas   1516240 Jan 11 05:19 agis_ddmendpoints.agis.ALL.json
[2026-01-11 06:34:33] drwx------. 5 boincer umatlas      4096 Jan 11 05:19 pilot3
[2026-01-11 06:34:33] -rw-r--r--. 1 boincer umatlas       529 Jan 11 06:23 boinc_task_state.xml
[2026-01-11 06:34:33] -rw-r--r--. 1 boincer umatlas      6876 Jan 11 06:27 init_data.xml
[2026-01-11 06:34:33] -rw-------. 1 boincer umatlas  43470177 Jan 11 06:33 HITS.47962010._003034.pool.root.1
[2026-01-11 06:34:33] -rw-------. 1 boincer umatlas      1039 Jan 11 06:33 memory_monitor_summary.json
[2026-01-11 06:34:33] -rw-------. 1 boincer umatlas   1302628 Jan 11 06:33 log.47962010._003034.job.log.tgz.1
[2026-01-11 06:34:33] -rw-------. 1 boincer umatlas      8579 Jan 11 06:33 heartbeat.json
[2026-01-11 06:34:33] -rw-------. 1 boincer umatlas        95 Jan 11 06:34 pilot_heartbeat.json
[2026-01-11 06:34:33] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 06:34 boinc_mmap_file
[2026-01-11 06:34:33] -rw-r--r--. 1 boincer umatlas        27 Jan 11 06:34 wrapper_checkpoint.txt
[2026-01-11 06:34:33] -rw-------. 1 boincer umatlas      4824 Jan 11 06:34 pilotlog.txt
[2026-01-11 06:34:33] -rw-------. 1 boincer umatlas    595563 Jan 11 06:34 log.47962010._003034.job.log.1
[2026-01-11 06:34:33] -rw-------. 1 boincer umatlas       353 Jan 11 06:34 output.list
[2026-01-11 06:34:33] -rw-r--r--. 1 boincer umatlas       620 Jan 11 06:34 runtime_log
[2026-01-11 06:34:33] -rw-------. 1 boincer umatlas   1914880 Jan 11 06:34 result.tar.gz
[2026-01-11 06:34:33] -rw-------. 1 boincer umatlas       653 Jan 11 06:34 szZLDmhh7y8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmG2mKDmcIpaHn.diag
[2026-01-11 06:34:33] -rw-r--r--. 1 boincer umatlas      9347 Jan 11 06:34 runtime_log.err
[2026-01-11 06:34:33] -rw-r--r--. 1 boincer umatlas     22482 Jan 11 06:34 stderr.txt
[2026-01-11 06:34:33] HITS file was successfully produced:
[2026-01-11 06:34:33] -rw-------. 1 boincer umatlas 43470177 Jan 11 06:33 shared/HITS.pool.root.1
[2026-01-11 06:34:33]  *** Contents of shared directory: ***
[2026-01-11 06:34:33] total 426276
[2026-01-11 06:34:33] -rw-r--r--. 2 boincer umatlas 390503703 Jan 11 05:19 ATLAS.root_0
[2026-01-11 06:34:33] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 05:19 start_atlas.sh
[2026-01-11 06:34:33] -rw-r--r--. 2 boincer umatlas    592609 Jan 11 05:19 input.tar.gz
[2026-01-11 06:34:33] -rw-------. 1 boincer umatlas  43470177 Jan 11 06:33 HITS.pool.root.1
[2026-01-11 06:34:33] -rw-------. 1 boincer umatlas   1914880 Jan 11 06:34 result.tar.gz
06:34:34 (1701835): run_atlas exited; CPU time 15046.002219
06:34:34 (1701835): called boinc_finish(0)

</stderr_txt>
]]>

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