Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:18:52 (2697368): wrapper (7.7.26015): starting
05:18:52 (2697368): wrapper: running run_atlas (--nthreads 10)
[2026-01-11 05:18:52] Arguments: --nthreads 10
[2026-01-11 05:18:52] Threads: 10
[2026-01-11 05:18:52] Checking for CVMFS
[2026-01-11 05:18:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 05:18:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 05:18:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 05:18:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 05:18:53] 2.13.3.0 15551 94459 343120 155013 3 13 28652451 32935936 6011 16776704 0 208398577 99.409 329533312 40537 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-11 05:18:53] CVMFS is ok
[2026-01-11 05:18:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 05:18:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 05:18:53] Further information can be found at the LHC@home message board.
[2026-01-11 05:18:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 05:18:53] Checking for apptainer binary...
[2026-01-11 05:18:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 05:18:53] Running /usr/bin/apptainer --version
[2026-01-11 05:18:53] apptainer version 1.4.5-2.el9
[2026-01-11 05:18:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 05:18:53] c6-5-7-3.aglt2.org
[2026-01-11 05:18:53] apptainer works
[2026-01-11 05:18:53] Set ATHENA_PROC_NUMBER=10
[2026-01-11 05:18:53] Set ATHENA_CORE_NUMBER=10
[2026-01-11 05:18:53] Starting ATLAS job with PandaID=6966143938
[2026-01-11 05:18:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 06:47:27]  *** The last 200 lines of the pilot log: ***
[2026-01-11 06:47:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-11 06:47:27]  replicas=None
[2026-01-11 06:47:27]  scope=mc16_13TeV
[2026-01-11 06:47:27]  status=None
[2026-01-11 06:47:27]  status_code=0
[2026-01-11 06:47:27]  storage_token=
[2026-01-11 06:47:27]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6966143938/log.47962010._003047.job.log.tgz.1
[2026-01-11 06:47:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/9c/5d/log.47962010._003047.job.log.tgz.1
[2026-01-11 06:47:27]  workdir=None
[2026-01-11 06:47:27] ]
[2026-01-11 06:47:27] 2026-01-11 11:46:45,613 | INFO     | transferring file log.47962010._003047.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6966143938/log.47962010._003047.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-11 06:47:27] 2026-01-11 11:46:45,613 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6966143938/log.47962010._003047.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._003047.job
[2026-01-11 06:47:27] 2026-01-11 11:46:45,754 | INFO     | adding to output.list: log.47962010._003047.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/9c/5d/log.47962010._003047.job.log.tgz.
[2026-01-11 06:47:27] 2026-01-11 11:46:45,755 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 06:47:27] 2026-01-11 11:46:45,755 | INFO     | summary of transferred files:
[2026-01-11 06:47:27] 2026-01-11 11:46:45,756 | INFO     |  -- lfn=log.47962010._003047.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 06:47:27] 2026-01-11 11:46:45,756 | INFO     | stage-out finished correctly
[2026-01-11 06:47:27] 2026-01-11 11:46:46,036 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 06:47:27] 2026-01-11 11:46:46,406 | INFO     | time since job start (5262s) is within the limit (349056.0s)
[2026-01-11 06:47:27] 2026-01-11 11:46:47,089 | WARNING  | process 2713774 can no longer be monitored (due to stat problems) - aborting
[2026-01-11 06:47:27] 2026-01-11 11:46:47,102 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966143938/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 06:47:27] 2026-01-11 11:46:47,750 | INFO     | number of running child processes to parent process 2713774: 1
[2026-01-11 06:47:27] 2026-01-11 11:46:47,751 | INFO     | maximum number of monitored processes: 18
[2026-01-11 06:47:27] 2026-01-11 11:46:48,340 | INFO     | job 6966143938 has state=finished
[2026-01-11 06:47:27] 2026-01-11 11:46:48,340 | INFO     | preparing for final server update for job 6966143938 in state='finished'
[2026-01-11 06:47:27] 2026-01-11 11:46:48,341 | INFO     | this job has now completed (state=finished)
[2026-01-11 06:47:27] 2026-01-11 11:46:48,341 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 06:47:27] 2026-01-11 11:46:48,341 | INFO     | log transfer has been attempted: DONE
[2026-01-11 06:47:27] 2026-01-11 11:46:48,341 | INFO     | job 6966143938 has finished - writing final server update
[2026-01-11 06:47:27] 2026-01-11 11:46:48,341 | INFO     | total number of processed events: 50 (read)
[2026-01-11 06:47:27] 2026-01-11 11:46:48,350 | INFO     | executing command: lscpu
[2026-01-11 06:47:27] 2026-01-11 11:46:48,414 | INFO     | time since job start (5264s) is within the limit (349056.0s)
[2026-01-11 06:47:27] 2026-01-11 11:46:48,473 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 06:47:27] 2026-01-11 11:46:50,256 | INFO     | monitor loop #309: job 0:6966143938 is in state 'finished'
[2026-01-11 06:47:27] 2026-01-11 11:46:50,256 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 06:47:27] 2026-01-11 11:46:50,421 | INFO     | time since job start (5266s) is within the limit (349056.0s)
[2026-01-11 06:47:27] 2026-01-11 11:46:52,428 | INFO     | time since job start (5268s) is within the limit (349056.0s)
[2026-01-11 06:47:27] 2026-01-11 11:46:52,764 | INFO     | monitor loop #310: job 0:6966143938 is in state 'finished'
[2026-01-11 06:47:27] 2026-01-11 11:46:52,764 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 06:47:27] 2026-01-11 11:46:53,948 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 06:47:27] 2026-01-11 11:46:53,964 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3067.015214285714
[2026-01-11 06:47:27] 2026-01-11 11:46:53,985 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966143938/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 06:47:27] 2026-01-11 11:46:53,986 | INFO     | extracted standard info from prmon json
[2026-01-11 06:47:27] 2026-01-11 11:46:53,986 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 06:47:27] 2026-01-11 11:46:53,986 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 06:47:27] 2026-01-11 11:46:53,989 | INFO     | fitting pss+swap vs Time
[2026-01-11 06:47:27] 2026-01-11 11:46:53,989 | INFO     | sum of square deviations: 152481286.17721546
[2026-01-11 06:47:27] 2026-01-11 11:46:53,989 | INFO     | sum of deviations: -5020261774.772154
[2026-01-11 06:47:27] 2026-01-11 11:46:53,989 | INFO     | mean x: 1768129457.8481014
[2026-01-11 06:47:27] 2026-01-11 11:46:53,989 | INFO     | mean y: 2758678.518987342
[2026-01-11 06:47:27] 2026-01-11 11:46:53,990 | INFO     | intersect: 58216280826.850685
[2026-01-11 06:47:27] 2026-01-11 11:46:53,994 | INFO     | chi2: 0.7241524885081555
[2026-01-11 06:47:27] 2026-01-11 11:46:53,994 | INFO     | current memory leak: -32.92 B/s (using 79 data points, chi2=0.72)
[2026-01-11 06:47:27] 2026-01-11 11:46:53,995 | INFO     | could have reported an average CPU frequency of 3090 MHz (6 samples)
[2026-01-11 06:47:27] 2026-01-11 11:46:53,995 | INFO     | ..............................
[2026-01-11 06:47:27] 2026-01-11 11:46:53,995 | INFO     | . Timing measurements:
[2026-01-11 06:47:27] 2026-01-11 11:46:53,995 | INFO     | . get job = 0 s
[2026-01-11 06:47:27] 2026-01-11 11:46:53,995 | INFO     | . initial setup = 2 s
[2026-01-11 06:47:27] 2026-01-11 11:46:53,995 | INFO     | . payload setup = 5 s
[2026-01-11 06:47:27] 2026-01-11 11:46:53,995 | INFO     | . stage-in = 0 s
[2026-01-11 06:47:27] 2026-01-11 11:46:53,995 | INFO     | . payload execution = 5234 s
[2026-01-11 06:47:27] 2026-01-11 11:46:53,995 | INFO     | . stage-out = 1 s
[2026-01-11 06:47:27] 2026-01-11 11:46:53,995 | INFO     | . log creation = 0 s
[2026-01-11 06:47:27] 2026-01-11 11:46:53,995 | INFO     | ..............................
[2026-01-11 06:47:27] 2026-01-11 11:46:54,355 | INFO     | 
[2026-01-11 06:47:27] 2026-01-11 11:46:54,355 | INFO     | job summary report
[2026-01-11 06:47:27] 2026-01-11 11:46:54,355 | INFO     | --------------------------------------------------
[2026-01-11 06:47:27] 2026-01-11 11:46:54,355 | INFO     | PanDA job id: 6966143938
[2026-01-11 06:47:27] 2026-01-11 11:46:54,355 | INFO     | task id: 47962010
[2026-01-11 06:47:27] 2026-01-11 11:46:54,355 | INFO     | errors: (none)
[2026-01-11 06:47:27] 2026-01-11 11:46:54,356 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 06:47:27] 2026-01-11 11:46:54,356 | INFO     | pilot state: finished 
[2026-01-11 06:47:27] 2026-01-11 11:46:54,356 | INFO     | transexitcode: 0
[2026-01-11 06:47:27] 2026-01-11 11:46:54,356 | INFO     | exeerrorcode: 0
[2026-01-11 06:47:27] 2026-01-11 11:46:54,356 | INFO     | exeerrordiag: 
[2026-01-11 06:47:27] 2026-01-11 11:46:54,356 | INFO     | exitcode: 0
[2026-01-11 06:47:27] 2026-01-11 11:46:54,356 | INFO     | exitmsg: OK
[2026-01-11 06:47:27] 2026-01-11 11:46:54,356 | INFO     | cpuconsumptiontime: 14296 s
[2026-01-11 06:47:27] 2026-01-11 11:46:54,356 | INFO     | nevents: 50
[2026-01-11 06:47:27] 2026-01-11 11:46:54,356 | INFO     | neventsw: 0
[2026-01-11 06:47:27] 2026-01-11 11:46:54,356 | INFO     | pid: 2713774
[2026-01-11 06:47:27] 2026-01-11 11:46:54,356 | INFO     | pgrp: 2713774
[2026-01-11 06:47:27] 2026-01-11 11:46:54,356 | INFO     | corecount: 10
[2026-01-11 06:47:27] 2026-01-11 11:46:54,356 | INFO     | event service: False
[2026-01-11 06:47:27] 2026-01-11 11:46:54,356 | INFO     | sizes: {0: 2284397, 1: 2284596, 4: 2284858, 11: 2284886, 5244: 2311928, 5245: 2311927, 5247: 2321161, 5255: 2321351}
[2026-01-11 06:47:27] 2026-01-11 11:46:54,357 | INFO     | --------------------------------------------------
[2026-01-11 06:47:27] 2026-01-11 11:46:54,357 | INFO     | 
[2026-01-11 06:47:27] 2026-01-11 11:46:54,357 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 06:47:27] 2026-01-11 11:46:54,379 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 06:47:27] 2026-01-11 11:46:54,379 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 06:47:27] 2026-01-11 11:46:54,380 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 06:47:27] 2026-01-11 11:46:54,380 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 06:47:27] 2026-01-11 11:46:54,380 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 06:47:27] 2026-01-11 11:46:54,380 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 06:47:27] 2026-01-11 11:46:54,380 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 06:47:27] 2026-01-11 11:46:54,380 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 06:47:27] 2026-01-11 11:46:54,380 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 06:47:27] 2026-01-11 11:46:54,380 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 06:47:27] 2026-01-11 11:46:54,380 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 06:47:27] 2026-01-11 11:46:54,380 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 06:47:27] 2026-01-11 11:46:54,380 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 06:47:27] 2026-01-11 11:46:54,380 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 06:47:27] 2026-01-11 11:46:54,380 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 06:47:27] 2026-01-11 11:46:54,381 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 06:47:27] 2026-01-11 11:46:54,381 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 06:47:27] 2026-01-11 11:46:54,381 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 06:47:27] 2026-01-11 11:46:54,381 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 06:47:27] 2026-01-11 11:46:54,381 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 06:47:27] 2026-01-11 11:46:54,381 | INFO     | job 6966143938 has completed (purged errors)
[2026-01-11 06:47:27] 2026-01-11 11:46:54,381 | INFO     | overall cleanup function is called
[2026-01-11 06:47:27] 2026-01-11 11:46:55,396 | INFO     | --- collectZombieJob: --- 10, [2713774]
[2026-01-11 06:47:27] 2026-01-11 11:46:55,396 | INFO     | zombie collector waiting for pid 2713774
[2026-01-11 06:47:27] 2026-01-11 11:46:55,396 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 06:47:27] 2026-01-11 11:46:55,396 | INFO     | collected zombie processes
[2026-01-11 06:47:27] 2026-01-11 11:46:55,396 | INFO     | will attempt to kill all subprocesses of pid=2713774
[2026-01-11 06:47:27] 2026-01-11 11:46:55,978 | INFO     | process IDs to be killed: [2713774] (in reverse order)
[2026-01-11 06:47:27] 2026-01-11 11:46:56,175 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 06:47:27] 2026-01-11 11:46:56,175 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 06:47:27] 2026-01-11 11:46:56,192 | INFO     | did not find any defunct processes belonging to 2713774
[2026-01-11 06:47:27] 2026-01-11 11:46:56,213 | INFO     | did not find any defunct processes belonging to 2713774
[2026-01-11 06:47:27] 2026-01-11 11:46:56,214 | INFO     | ready for new job
[2026-01-11 06:47:27] 2026-01-11 11:46:56,214 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 06:47:27] 2026-01-11 11:46:56,215 | INFO     | ***************************************
[2026-01-11 06:47:27] 2026-01-11 11:46:56,215 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 06:47:27] 2026-01-11 11:46:56,216 | INFO     | ***************************************
[2026-01-11 06:47:27] 2026-01-11 11:46:56,216 | INFO     | 
[2026-01-11 06:47:27] 2026-01-11 11:46:56,223 | INFO     | architecture information:
[2026-01-11 06:47:27] 2026-01-11 11:46:56,231 | INFO     | executing command: cat /etc/os-release
[2026-01-11 06:47:27] 2026-01-11 11:46:56,356 | INFO     | cat /etc/os-release:
[2026-01-11 06:47:27] NAME="CentOS Linux"
[2026-01-11 06:47:27] VERSION="7 (Core)"
[2026-01-11 06:47:27] ID="centos"
[2026-01-11 06:47:27] ID_LIKE="rhel fedora"
[2026-01-11 06:47:27] VERSION_ID="7"
[2026-01-11 06:47:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 06:47:27] ANSI_COLOR="0;31"
[2026-01-11 06:47:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 06:47:27] HOME_URL="https://www.centos.org/"
[2026-01-11 06:47:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 06:47:27] 
[2026-01-11 06:47:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 06:47:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 06:47:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 06:47:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 06:47:27] 
[2026-01-11 06:47:27] 2026-01-11 11:46:56,357 | INFO     | ***************************************
[2026-01-11 06:47:27] 2026-01-11 11:46:56,860 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 06:47:27] 2026-01-11 11:46:56,994 | INFO     | sufficient remaining disk space (75432460288 B)
[2026-01-11 06:47:27] 2026-01-11 11:46:56,998 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 06:47:27] 2026-01-11 11:46:56,998 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 06:47:27] 2026-01-11 11:46:56,998 | INFO     | update_server=False
[2026-01-11 06:47:27] 2026-01-11 11:46:56,998 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 06:47:27] 2026-01-11 11:46:56,999 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 06:47:27] 2026-01-11 11:46:56,999 | INFO     | aborting loop
[2026-01-11 06:47:27] 2026-01-11 11:46:56,999 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 06:47:27] 2026-01-11 11:46:56,999 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 06:47:27] 2026-01-11 11:46:57,532 | INFO     | all job control threads have been joined
[2026-01-11 06:47:27] 2026-01-11 11:46:57,697 | INFO     | all data control threads have been joined
[2026-01-11 06:47:27] 2026-01-11 11:46:58,003 | INFO     | [job] retrieve thread has finished
[2026-01-11 06:47:27] 2026-01-11 11:46:58,007 | INFO     | [job] job monitor thread has finished
[2026-01-11 06:47:27] 2026-01-11 11:46:58,112 | INFO     | all payload control threads have been joined
[2026-01-11 06:47:27] 2026-01-11 11:46:58,224 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 06:47:27] 2026-01-11 11:46:58,224 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 06:47:27] 2026-01-11 11:46:58,269 | INFO     | [payload] failed_post thread has finished
[2026-01-11 06:47:27] 2026-01-11 11:46:58,541 | INFO     | [job] control thread has finished
[2026-01-11 06:47:27] 2026-01-11 11:46:58,703 | INFO     | [data] control thread has finished
[2026-01-11 06:47:27] 2026-01-11 11:46:58,937 | INFO     | [job] validate thread has finished
[2026-01-11 06:47:27] 2026-01-11 11:46:59,008 | INFO     | [data] copytool_out thread has finished
[2026-01-11 06:47:27] 2026-01-11 11:46:59,118 | INFO     | [payload] control thread has finished
[2026-01-11 06:47:27] 2026-01-11 11:46:59,175 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 06:47:27] 2026-01-11 11:46:59,383 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 06:47:27] 2026-01-11 11:46:59,384 | INFO     | [data] copytool_in thread has finished
[2026-01-11 06:47:27] 2026-01-11 11:46:59,438 | INFO     | [payload] validate_post thread has finished
[2026-01-11 06:47:27] 2026-01-11 11:47:00,180 | INFO     | [job] queue monitor thread has finished
[2026-01-11 06:47:27] 2026-01-11 11:47:01,012 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 06:47:27] 2026-01-11 11:47:07,391 | INFO     | job.realtimelogging is not enabled
[2026-01-11 06:47:27] 2026-01-11 11:47:08,396 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 06:47:27] 2026-01-11 11:47:12,945 | INFO     | [monitor] cgroup control has ended
[2026-01-11 06:47:27] 2026-01-11 11:47:14,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140590058379072)>', '<ExcThread(monitor, started 140589429413632)>']
[2026-01-11 06:47:27] 2026-01-11 11:47:19,389 | INFO     | all workflow threads have been joined
[2026-01-11 06:47:27] 2026-01-11 11:47:19,390 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 06:47:27] 2026-01-11 11:47:19,390 | INFO     | traces error code: 0
[2026-01-11 06:47:27] 2026-01-11 11:47:19,390 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 06:47:27] 2026-01-11 11:47:26,521 | INFO     | PID=2701096 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 06:47:27] 2026-01-11 11:47:26,524 | INFO     | .. there are 9 such processes running
[2026-01-11 06:47:27] 2026-01-11 11:47:26,525 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 06:47:27] 2026-01-11 11:47:26,525 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 06:47:27] 2026-01-11 11:47:26,525 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 06:47:27] 2026-01-11 11:47:26,525 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 06:47:27] 2026-01-11 11:47:26,525 | INFO     | [monitor] control thread has ended
[2026-01-11 06:47:27] 2026-01-11 11:47:27,028 [wrapper] ==== pilot stdout END ====
[2026-01-11 06:47:27] 2026-01-11 11:47:27,054 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 06:47:27] 2026-01-11 11:47:27,067 [wrapper] pilotpid: 2701096
[2026-01-11 06:47:27] 2026-01-11 11:47:27,085 [wrapper] Pilot exit status: 0
[2026-01-11 06:47:27] 2026-01-11 11:47:27,270 [wrapper] pandaids: 6966143938
[2026-01-11 06:47:27] 2026-01-11 11:47:27,476 [wrapper] cleanup supervisor_pilot 2905494 2701097
[2026-01-11 06:47:27] 2026-01-11 11:47:27,479 [wrapper] Test setup, not cleaning
[2026-01-11 06:47:27] 2026-01-11 11:47:27,482 [wrapper] apfmon messages muted
[2026-01-11 06:47:27] 2026-01-11 11:47:27,484 [wrapper] ==== wrapper stdout END ====
[2026-01-11 06:47:27] 2026-01-11 11:47:27,487 [wrapper] ==== wrapper stderr END ====
[2026-01-11 06:47:27]  *** Error codes and diagnostics ***
[2026-01-11 06:47:27]     "exeErrorCode": 0,
[2026-01-11 06:47:27]     "exeErrorDiag": "",
[2026-01-11 06:47:27]     "pilotErrorCode": 0,
[2026-01-11 06:47:27]     "pilotErrorDiag": "",
[2026-01-11 06:47:27]  *** Listing of results directory ***
[2026-01-11 06:47:27] total 436652
[2026-01-11 06:47:27] -rw-r--r--. 1 boincer umatlas    579449 Jan 11 05:14 pilot3.tar.gz
[2026-01-11 06:47:27] -rw-r--r--. 1 boincer umatlas      5112 Jan 11 05:17 queuedata.json
[2026-01-11 06:47:27] -rwx------. 1 boincer umatlas     36322 Jan 11 05:17 runpilot2-wrapper.sh
[2026-01-11 06:47:27] -rw-r--r--. 1 boincer umatlas       100 Jan 11 05:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 06:47:27] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 05:18 run_atlas
[2026-01-11 06:47:27] -rw-r--r--. 1 boincer umatlas       105 Jan 11 05:18 job.xml
[2026-01-11 06:47:27] -rw-r--r--. 2 boincer umatlas 393201107 Jan 11 05:18 EVNT.47962006._000031.pool.root.1
[2026-01-11 06:47:27] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 05:18 start_atlas.sh
[2026-01-11 06:47:27] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 05:18 shared
[2026-01-11 06:47:27] -rw-r--r--. 2 boincer umatlas    592618 Jan 11 05:18 input.tar.gz
[2026-01-11 06:47:27] -rw-r--r--. 1 boincer umatlas         0 Jan 11 05:18 boinc_lockfile
[2026-01-11 06:47:27] -rw-r--r--. 1 boincer umatlas      2889 Jan 11 05:18 pandaJob.out
[2026-01-11 06:47:27] -rw-------. 1 boincer umatlas        57 Jan 11 05:18 setup.sh.local
[2026-01-11 06:47:27] -rw-------. 1 boincer umatlas    989548 Jan 11 05:19 agis_schedconf.cvmfs.json
[2026-01-11 06:47:27] -rw-------. 1 boincer umatlas   1516240 Jan 11 05:19 agis_ddmendpoints.agis.ALL.json
[2026-01-11 06:47:27] drwx------. 5 boincer umatlas      4096 Jan 11 05:19 pilot3
[2026-01-11 06:47:27] -rw-r--r--. 1 boincer umatlas       530 Jan 11 06:37 boinc_task_state.xml
[2026-01-11 06:47:27] -rw-r--r--. 1 boincer umatlas      6841 Jan 11 06:45 init_data.xml
[2026-01-11 06:47:27] -rw-------. 1 boincer umatlas  45811959 Jan 11 06:46 HITS.47962010._003047.pool.root.1
[2026-01-11 06:47:27] -rw-------. 1 boincer umatlas      1036 Jan 11 06:46 memory_monitor_summary.json
[2026-01-11 06:47:27] -rw-------. 1 boincer umatlas   1411294 Jan 11 06:46 log.47962010._003047.job.log.tgz.1
[2026-01-11 06:47:27] -rw-------. 1 boincer umatlas      8583 Jan 11 06:46 heartbeat.json
[2026-01-11 06:47:27] -rw-------. 1 boincer umatlas        95 Jan 11 06:47 pilot_heartbeat.json
[2026-01-11 06:47:27] -rw-------. 1 boincer umatlas       822 Jan 11 06:47 pilotlog.txt
[2026-01-11 06:47:27] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 06:47 boinc_mmap_file
[2026-01-11 06:47:27] -rw-------. 1 boincer umatlas    688657 Jan 11 06:47 log.47962010._003047.job.log.1
[2026-01-11 06:47:27] -rw-r--r--. 1 boincer umatlas        27 Jan 11 06:47 wrapper_checkpoint.txt
[2026-01-11 06:47:27] -rw-------. 1 boincer umatlas       353 Jan 11 06:47 output.list
[2026-01-11 06:47:27] -rw-r--r--. 1 boincer umatlas       620 Jan 11 06:47 runtime_log
[2026-01-11 06:47:27] -rw-------. 1 boincer umatlas   2119680 Jan 11 06:47 result.tar.gz
[2026-01-11 06:47:27] -rw-------. 1 boincer umatlas       652 Jan 11 06:47 XbFMDm6g7y8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm81mKDmj71WMn.diag
[2026-01-11 06:47:27] -rw-r--r--. 1 boincer umatlas      9344 Jan 11 06:47 runtime_log.err
[2026-01-11 06:47:27] -rw-r--r--. 1 boincer umatlas     22001 Jan 11 06:47 stderr.txt
[2026-01-11 06:47:27] HITS file was successfully produced:
[2026-01-11 06:47:27] -rw-------. 1 boincer umatlas 45811959 Jan 11 06:46 shared/HITS.pool.root.1
[2026-01-11 06:47:27]  *** Contents of shared directory: ***
[2026-01-11 06:47:27] total 431400
[2026-01-11 06:47:27] -rw-r--r--. 2 boincer umatlas 393201107 Jan 11 05:18 ATLAS.root_0
[2026-01-11 06:47:27] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 05:18 start_atlas.sh
[2026-01-11 06:47:27] -rw-r--r--. 2 boincer umatlas    592618 Jan 11 05:18 input.tar.gz
[2026-01-11 06:47:27] -rw-------. 1 boincer umatlas  45811959 Jan 11 06:46 HITS.pool.root.1
[2026-01-11 06:47:27] -rw-------. 1 boincer umatlas   2119680 Jan 11 06:47 result.tar.gz
06:47:29 (2697368): run_atlas exited; CPU time 14319.360365
06:47:29 (2697368): called boinc_finish(0)

</stderr_txt>
]]>

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