Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:19:06 (1702741): wrapper (7.7.26015): starting
05:19:06 (1702741): wrapper: running run_atlas (--nthreads 9)
[2026-01-11 05:19:06] Arguments: --nthreads 9
[2026-01-11 05:19:06] Threads: 9
[2026-01-11 05:19:06] Checking for CVMFS
[2026-01-11 05:19:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 05:19:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 05:19:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 05:19:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 05:19:07] 2.13.3.0 11959 96162 358848 155013 3 331 25977551 32935937 19906 16776704 0 400605433 99.493 555765111 34150 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-11 05:19:07] CVMFS is ok
[2026-01-11 05:19:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 05:19:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 05:19:07] Further information can be found at the LHC@home message board.
[2026-01-11 05:19:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 05:19:07] Checking for apptainer binary...
[2026-01-11 05:19:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 05:19:07] Running /usr/bin/apptainer --version
[2026-01-11 05:19:07] apptainer version 1.4.5-2.el9
[2026-01-11 05:19:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 05:19:07] c6-8-25-4.aglt2.org
[2026-01-11 05:19:07] apptainer works
[2026-01-11 05:19:07] Set ATHENA_PROC_NUMBER=9
[2026-01-11 05:19:07] Set ATHENA_CORE_NUMBER=9
[2026-01-11 05:19:07] Starting ATLAS job with PandaID=6966143926
[2026-01-11 05:19:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 07:32:40]  *** The last 200 lines of the pilot log: ***
[2026-01-11 07:32:40] 2026-01-11 12:31:49,396 | INFO     | time since job start (7949s) is within the limit (349056.0s)
[2026-01-11 07:32:40] 2026-01-11 12:31:51,311 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 07:32:40] 2026-01-11 12:31:51,326 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2639.7171249999997
[2026-01-11 07:32:40] 2026-01-11 12:31:51,345 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6966143926/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 07:32:40] 2026-01-11 12:31:51,345 | INFO     | extracted standard info from prmon json
[2026-01-11 07:32:40] 2026-01-11 12:31:51,345 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 07:32:40] 2026-01-11 12:31:51,346 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 07:32:40] 2026-01-11 12:31:51,349 | INFO     | fitting pss+swap vs Time
[2026-01-11 07:32:40] 2026-01-11 12:31:51,349 | INFO     | sum of square deviations: 680830061.5076909
[2026-01-11 07:32:40] 2026-01-11 12:31:51,350 | INFO     | sum of deviations: 47399341690.00002
[2026-01-11 07:32:40] 2026-01-11 12:31:51,350 | INFO     | mean x: 1768130731.1384616
[2026-01-11 07:32:40] 2026-01-11 12:31:51,350 | INFO     | mean y: 2506041.5
[2026-01-11 07:32:40] 2026-01-11 12:31:51,350 | INFO     | intersect: -123094632901.26212
[2026-01-11 07:32:40] 2026-01-11 12:31:51,350 | INFO     | chi2: 4.929650098427892
[2026-01-11 07:32:40] 2026-01-11 12:31:51,351 | INFO     | sum of square deviations: 605274990.0480018
[2026-01-11 07:32:40] 2026-01-11 12:31:51,351 | INFO     | sum of deviations: 66175681649.84002
[2026-01-11 07:32:40] 2026-01-11 12:31:51,352 | INFO     | mean x: 1768130578.704
[2026-01-11 07:32:40] 2026-01-11 12:31:51,352 | INFO     | mean y: 2543577.32
[2026-01-11 07:32:40] 2026-01-11 12:31:51,352 | INFO     | intersect: -193309997359.45975
[2026-01-11 07:32:40] 2026-01-11 12:31:51,352 | INFO     | chi2: 3.7764939577105623
[2026-01-11 07:32:40] 2026-01-11 12:31:51,352 | INFO     | current chi2=3.7764939577105623 (change=23.392251330070692 %)
[2026-01-11 07:32:40] 2026-01-11 12:31:51,352 | INFO     | right removable region: 124
[2026-01-11 07:32:40] 2026-01-11 12:31:51,352 | INFO     | sum of square deviations: 605145060.0480018
[2026-01-11 07:32:40] 2026-01-11 12:31:51,353 | INFO     | sum of deviations: 9142026106.663996
[2026-01-11 07:32:40] 2026-01-11 12:31:51,353 | INFO     | mean x: 1768130883.704
[2026-01-11 07:32:40] 2026-01-11 12:31:51,353 | INFO     | mean y: 2582850.072
[2026-01-11 07:32:40] 2026-01-11 12:31:51,353 | INFO     | intersect: -26708861671.244347
[2026-01-11 07:32:40] 2026-01-11 12:31:51,354 | INFO     | chi2: 1.7060795914812026
[2026-01-11 07:32:40] 2026-01-11 12:31:51,354 | INFO     | current chi2=1.7060795914812026 (change=65.39146678939169 %)
[2026-01-11 07:32:40] 2026-01-11 12:31:51,354 | INFO     | sum of square deviations: 535356881.96666664
[2026-01-11 07:32:40] 2026-01-11 12:31:51,355 | INFO     | sum of deviations: -2672562548.4666653
[2026-01-11 07:32:40] 2026-01-11 12:31:51,355 | INFO     | mean x: 1768131036.1833334
[2026-01-11 07:32:40] 2026-01-11 12:31:51,355 | INFO     | mean y: 2608257.066666667
[2026-01-11 07:32:40] 2026-01-11 12:31:51,355 | INFO     | intersect: 8829319834.446482
[2026-01-11 07:32:40] 2026-01-11 12:31:51,355 | INFO     | chi2: 1.2760062433113692
[2026-01-11 07:32:40] 2026-01-11 12:31:51,355 | INFO     | current chi2=1.2760062433113692 (change=25.20828162515253 %)
[2026-01-11 07:32:40] 2026-01-11 12:31:51,356 | INFO     | sum of square deviations: 471224858.1217391
[2026-01-11 07:32:40] 2026-01-11 12:31:51,356 | INFO     | sum of deviations: -6125311912.9217415
[2026-01-11 07:32:40] 2026-01-11 12:31:51,356 | INFO     | mean x: 1768131188.573913
[2026-01-11 07:32:40] 2026-01-11 12:31:51,356 | INFO     | mean y: 2616455.2260869564
[2026-01-11 07:32:40] 2026-01-11 12:31:51,356 | INFO     | intersect: 22986028400.319798
[2026-01-11 07:32:40] 2026-01-11 12:31:51,357 | INFO     | chi2: 1.2524420407040813
[2026-01-11 07:32:40] 2026-01-11 12:31:51,357 | INFO     | current chi2=1.2524420407040813 (change=1.84671530651264 %)
[2026-01-11 07:32:40] 2026-01-11 12:31:51,357 | INFO     | left removable region: 30
[2026-01-11 07:32:40] 2026-01-11 12:31:51,357 | INFO     | sum of square deviations: 257378085.6170212
[2026-01-11 07:32:40] 2026-01-11 12:31:51,357 | INFO     | sum of deviations: 5822536921.702127
[2026-01-11 07:32:40] 2026-01-11 12:31:51,358 | INFO     | mean x: 1768131462.93617
[2026-01-11 07:32:40] 2026-01-11 12:31:51,358 | INFO     | mean y: 2695240.1170212766
[2026-01-11 07:32:40] 2026-01-11 12:31:51,358 | INFO     | intersect: -39996866885.339264
[2026-01-11 07:32:40] 2026-01-11 12:31:51,358 | INFO     | chi2: 0.044698518864447784
[2026-01-11 07:32:40] 2026-01-11 12:31:51,358 | INFO     | current memory leak: 22.62 B/s (using 94 data points, chi2=0.04)
[2026-01-11 07:32:40] 2026-01-11 12:31:51,359 | INFO     | could have reported an average CPU frequency of 2663 MHz (8 samples)
[2026-01-11 07:32:40] 2026-01-11 12:31:51,359 | INFO     | ..............................
[2026-01-11 07:32:40] 2026-01-11 12:31:51,359 | INFO     | . Timing measurements:
[2026-01-11 07:32:40] 2026-01-11 12:31:51,359 | INFO     | . get job = 0 s
[2026-01-11 07:32:40] 2026-01-11 12:31:51,359 | INFO     | . initial setup = 2 s
[2026-01-11 07:32:40] 2026-01-11 12:31:51,359 | INFO     | . payload setup = 8 s
[2026-01-11 07:32:40] 2026-01-11 12:31:51,359 | INFO     | . stage-in = 0 s
[2026-01-11 07:32:40] 2026-01-11 12:31:51,359 | INFO     | . payload execution = 7911 s
[2026-01-11 07:32:40] 2026-01-11 12:31:51,359 | INFO     | . stage-out = 0 s
[2026-01-11 07:32:40] 2026-01-11 12:31:51,360 | INFO     | . log creation = 0 s
[2026-01-11 07:32:40] 2026-01-11 12:31:51,360 | INFO     | ..............................
[2026-01-11 07:32:40] 2026-01-11 12:31:51,409 | INFO     | time since job start (7951s) is within the limit (349056.0s)
[2026-01-11 07:32:40] 2026-01-11 12:31:51,464 | INFO     | 
[2026-01-11 07:32:40] 2026-01-11 12:31:51,465 | INFO     | job summary report
[2026-01-11 07:32:40] 2026-01-11 12:31:51,465 | INFO     | --------------------------------------------------
[2026-01-11 07:32:40] 2026-01-11 12:31:51,465 | INFO     | PanDA job id: 6966143926
[2026-01-11 07:32:40] 2026-01-11 12:31:51,465 | INFO     | task id: 47962010
[2026-01-11 07:32:40] 2026-01-11 12:31:51,465 | INFO     | errors: (none)
[2026-01-11 07:32:40] 2026-01-11 12:31:51,465 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 07:32:40] 2026-01-11 12:31:51,466 | INFO     | pilot state: finished 
[2026-01-11 07:32:40] 2026-01-11 12:31:51,466 | INFO     | transexitcode: 0
[2026-01-11 07:32:40] 2026-01-11 12:31:51,467 | INFO     | exeerrorcode: 0
[2026-01-11 07:32:40] 2026-01-11 12:31:51,467 | INFO     | exeerrordiag: 
[2026-01-11 07:32:40] 2026-01-11 12:31:51,467 | INFO     | exitcode: 0
[2026-01-11 07:32:40] 2026-01-11 12:31:51,467 | INFO     | exitmsg: OK
[2026-01-11 07:32:40] 2026-01-11 12:31:51,467 | INFO     | cpuconsumptiontime: 16653 s
[2026-01-11 07:32:40] 2026-01-11 12:31:51,467 | INFO     | nevents: 50
[2026-01-11 07:32:40] 2026-01-11 12:31:51,467 | INFO     | neventsw: 0
[2026-01-11 07:32:40] 2026-01-11 12:31:51,467 | INFO     | pid: 1734240
[2026-01-11 07:32:40] 2026-01-11 12:31:51,467 | INFO     | pgrp: 1734240
[2026-01-11 07:32:40] 2026-01-11 12:31:51,467 | INFO     | corecount: 9
[2026-01-11 07:32:40] 2026-01-11 12:31:51,467 | INFO     | event service: False
[2026-01-11 07:32:40] 2026-01-11 12:31:51,467 | INFO     | sizes: {0: 2284568, 5: 2284830, 11: 2284886, 7923: 2313279, 7924: 2322273, 7928: 2322329, 7934: 2322703}
[2026-01-11 07:32:40] 2026-01-11 12:31:51,467 | INFO     | --------------------------------------------------
[2026-01-11 07:32:40] 2026-01-11 12:31:51,467 | INFO     | 
[2026-01-11 07:32:40] 2026-01-11 12:31:51,468 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-11 07:32:40] 2026-01-11 12:31:51,493 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 07:32:40] 2026-01-11 12:31:51,494 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 07:32:40] 2026-01-11 12:31:51,494 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 07:32:40] 2026-01-11 12:31:51,494 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 07:32:40] 2026-01-11 12:31:51,494 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 07:32:40] 2026-01-11 12:31:51,494 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 07:32:40] 2026-01-11 12:31:51,494 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 07:32:40] 2026-01-11 12:31:51,494 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 07:32:40] 2026-01-11 12:31:51,494 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 07:32:40] 2026-01-11 12:31:51,494 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 07:32:40] 2026-01-11 12:31:51,494 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 07:32:40] 2026-01-11 12:31:51,494 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 07:32:40] 2026-01-11 12:31:51,494 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 07:32:40] 2026-01-11 12:31:51,494 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 07:32:40] 2026-01-11 12:31:51,495 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 07:32:40] 2026-01-11 12:31:51,495 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 07:32:40] 2026-01-11 12:31:51,495 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 07:32:40] 2026-01-11 12:31:51,495 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 07:32:40] 2026-01-11 12:31:51,495 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 07:32:40] 2026-01-11 12:31:51,495 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 07:32:40] 2026-01-11 12:31:51,495 | INFO     | job 6966143926 has completed (purged errors)
[2026-01-11 07:32:40] 2026-01-11 12:31:51,495 | INFO     | overall cleanup function is called
[2026-01-11 07:32:40] 2026-01-11 12:31:52,510 | INFO     | --- collectZombieJob: --- 10, [1734240]
[2026-01-11 07:32:40] 2026-01-11 12:31:52,510 | INFO     | zombie collector waiting for pid 1734240
[2026-01-11 07:32:40] 2026-01-11 12:31:52,510 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 07:32:40] 2026-01-11 12:31:52,510 | INFO     | collected zombie processes
[2026-01-11 07:32:40] 2026-01-11 12:31:52,510 | INFO     | will attempt to kill all subprocesses of pid=1734240
[2026-01-11 07:32:40] 2026-01-11 12:31:52,965 | INFO     | process IDs to be killed: [1734240] (in reverse order)
[2026-01-11 07:32:40] 2026-01-11 12:31:53,126 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 07:32:40] 2026-01-11 12:31:53,126 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 07:32:40] 2026-01-11 12:31:53,143 | INFO     | did not find any defunct processes belonging to 1734240
[2026-01-11 07:32:40] 2026-01-11 12:31:53,160 | INFO     | did not find any defunct processes belonging to 1734240
[2026-01-11 07:32:40] 2026-01-11 12:31:53,160 | INFO     | ready for new job
[2026-01-11 07:32:40] 2026-01-11 12:31:53,160 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 07:32:40] 2026-01-11 12:31:53,162 | INFO     | ***************************************
[2026-01-11 07:32:40] 2026-01-11 12:31:53,162 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 07:32:40] 2026-01-11 12:31:53,162 | INFO     | ***************************************
[2026-01-11 07:32:40] 2026-01-11 12:31:53,163 | INFO     | 
[2026-01-11 07:32:40] 2026-01-11 12:31:53,168 | INFO     | architecture information:
[2026-01-11 07:32:40] 2026-01-11 12:31:53,169 | INFO     | executing command: cat /etc/os-release
[2026-01-11 07:32:40] 2026-01-11 12:31:53,190 | INFO     | cat /etc/os-release:
[2026-01-11 07:32:40] NAME="CentOS Linux"
[2026-01-11 07:32:40] VERSION="7 (Core)"
[2026-01-11 07:32:40] ID="centos"
[2026-01-11 07:32:40] ID_LIKE="rhel fedora"
[2026-01-11 07:32:40] VERSION_ID="7"
[2026-01-11 07:32:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 07:32:40] ANSI_COLOR="0;31"
[2026-01-11 07:32:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 07:32:40] HOME_URL="https://www.centos.org/"
[2026-01-11 07:32:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 07:32:40] 
[2026-01-11 07:32:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 07:32:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 07:32:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 07:32:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 07:32:40] 
[2026-01-11 07:32:40] 2026-01-11 12:31:53,190 | INFO     | ***************************************
[2026-01-11 07:32:40] 2026-01-11 12:31:53,693 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-11 07:32:40] 2026-01-11 12:31:53,715 | INFO     | sufficient remaining disk space (75476500480 B)
[2026-01-11 07:32:40] 2026-01-11 12:31:53,715 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 07:32:40] 2026-01-11 12:31:53,716 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 07:32:40] 2026-01-11 12:31:53,716 | INFO     | update_server=False
[2026-01-11 07:32:40] 2026-01-11 12:31:53,716 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 07:32:40] 2026-01-11 12:31:54,065 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 07:32:40] 2026-01-11 12:31:54,069 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 07:32:40] 2026-01-11 12:31:54,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:32:40] 2026-01-11 12:31:54,070 | INFO     | will abort loop
[2026-01-11 07:32:40] 2026-01-11 12:31:54,393 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 07:32:40] 2026-01-11 12:31:54,646 | INFO     | all data control threads have been joined
[2026-01-11 07:32:40] 2026-01-11 12:31:54,721 | INFO     | [job] retrieve thread has finished
[2026-01-11 07:32:40] 2026-01-11 12:31:54,755 | INFO     | [payload] failed_post thread has finished
[2026-01-11 07:32:40] 2026-01-11 12:31:54,942 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 07:32:40] 2026-01-11 12:31:55,076 | INFO     | [job] job monitor thread has finished
[2026-01-11 07:32:40] 2026-01-11 12:31:55,134 | INFO     | all payload control threads have been joined
[2026-01-11 07:32:40] 2026-01-11 12:31:55,164 | INFO     | all job control threads have been joined
[2026-01-11 07:32:40] 2026-01-11 12:31:55,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 07:32:40] 2026-01-11 12:31:55,652 | INFO     | [data] control thread has finished
[2026-01-11 07:32:40] 2026-01-11 12:31:55,689 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 07:32:40] 2026-01-11 12:31:55,826 | INFO     | [payload] validate_post thread has finished
[2026-01-11 07:32:40] 2026-01-11 12:31:56,017 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 07:32:40] 2026-01-11 12:31:56,141 | INFO     | [payload] control thread has finished
[2026-01-11 07:32:40] 2026-01-11 12:31:56,168 | INFO     | [job] validate thread has finished
[2026-01-11 07:32:40] 2026-01-11 12:31:56,169 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 07:32:40] 2026-01-11 12:31:56,169 | INFO     | [job] control thread has finished
[2026-01-11 07:32:40] 2026-01-11 12:31:56,170 | INFO     | [data] copytool_in thread has finished
[2026-01-11 07:32:40] 2026-01-11 12:31:56,399 | INFO     | [data] copytool_out thread has finished
[2026-01-11 07:32:40] 2026-01-11 12:31:56,475 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:32:40] 2026-01-11 12:31:57,480 | INFO     | [job] queue monitor thread has finished
[2026-01-11 07:32:40] 2026-01-11 12:31:59,325 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 07:32:40] 2026-01-11 12:32:25,011 | INFO     | PID=1713442 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 07:32:40] 2026-01-11 12:32:25,011 | INFO     | .. there are 21 such processes running
[2026-01-11 07:32:40] 2026-01-11 12:32:25,012 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 07:32:40] 2026-01-11 12:32:25,012 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 07:32:40] 2026-01-11 12:32:25,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 07:32:40] 2026-01-11 12:32:33,765 | INFO     | [monitor] cgroup control has ended
[2026-01-11 07:32:40] 2026-01-11 12:32:35,474 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140236451899200)>', '<ExcThread(monitor, started 140235941848832)>']
[2026-01-11 07:32:40] 2026-01-11 12:32:36,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 07:32:40] 2026-01-11 12:32:36,075 | INFO     | [monitor] control thread has ended
[2026-01-11 07:32:40] 2026-01-11 12:32:40,500 | INFO     | all workflow threads have been joined
[2026-01-11 07:32:40] 2026-01-11 12:32:40,500 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 07:32:40] 2026-01-11 12:32:40,500 | INFO     | traces error code: 0
[2026-01-11 07:32:40] 2026-01-11 12:32:40,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 07:32:40] 2026-01-11 12:32:40,641 [wrapper] ==== pilot stdout END ====
[2026-01-11 07:32:40] 2026-01-11 12:32:40,644 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 07:32:40] 2026-01-11 12:32:40,646 [wrapper] pilotpid: 1713442
[2026-01-11 07:32:40] 2026-01-11 12:32:40,648 [wrapper] Pilot exit status: 0
[2026-01-11 07:32:40] 2026-01-11 12:32:40,657 [wrapper] pandaids: 6966143926
[2026-01-11 07:32:40] 2026-01-11 12:32:40,739 [wrapper] cleanup supervisor_pilot 2060923 1713443
[2026-01-11 07:32:40] 2026-01-11 12:32:40,741 [wrapper] Test setup, not cleaning
[2026-01-11 07:32:40] 2026-01-11 12:32:40,743 [wrapper] apfmon messages muted
[2026-01-11 07:32:40] 2026-01-11 12:32:40,746 [wrapper] ==== wrapper stdout END ====
[2026-01-11 07:32:40] 2026-01-11 12:32:40,748 [wrapper] ==== wrapper stderr END ====
[2026-01-11 07:32:40]  *** Error codes and diagnostics ***
[2026-01-11 07:32:40]     "exeErrorCode": 0,
[2026-01-11 07:32:40]     "exeErrorDiag": "",
[2026-01-11 07:32:40]     "pilotErrorCode": 0,
[2026-01-11 07:32:40]     "pilotErrorDiag": "",
[2026-01-11 07:32:40]  *** Listing of results directory ***
[2026-01-11 07:32:40] total 433924
[2026-01-11 07:32:40] -rw-r--r--. 1 boincer umatlas    579449 Jan 11 05:14 pilot3.tar.gz
[2026-01-11 07:32:40] -rw-r--r--. 1 boincer umatlas      5112 Jan 11 05:17 queuedata.json
[2026-01-11 07:32:40] -rwx------. 1 boincer umatlas     36322 Jan 11 05:17 runpilot2-wrapper.sh
[2026-01-11 07:32:40] -rw-r--r--. 1 boincer umatlas       100 Jan 11 05:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 07:32:40] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 05:19 run_atlas
[2026-01-11 07:32:40] -rw-r--r--. 1 boincer umatlas       105 Jan 11 05:19 job.xml
[2026-01-11 07:32:40] -rw-r--r--. 2 boincer umatlas 390503703 Jan 11 05:19 EVNT.47962006._000011.pool.root.1
[2026-01-11 07:32:40] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 05:19 start_atlas.sh
[2026-01-11 07:32:40] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 05:19 shared
[2026-01-11 07:32:40] -rw-r--r--. 2 boincer umatlas    592610 Jan 11 05:19 input.tar.gz
[2026-01-11 07:32:40] -rw-r--r--. 1 boincer umatlas         0 Jan 11 05:19 boinc_lockfile
[2026-01-11 07:32:40] -rw-r--r--. 1 boincer umatlas      2889 Jan 11 05:19 pandaJob.out
[2026-01-11 07:32:40] -rw-------. 1 boincer umatlas        57 Jan 11 05:19 setup.sh.local
[2026-01-11 07:32:40] -rw-------. 1 boincer umatlas    989548 Jan 11 05:19 agis_schedconf.cvmfs.json
[2026-01-11 07:32:40] -rw-------. 1 boincer umatlas   1516240 Jan 11 05:19 agis_ddmendpoints.agis.ALL.json
[2026-01-11 07:32:40] drwx------. 5 boincer umatlas      4096 Jan 11 05:19 pilot3
[2026-01-11 07:32:40] -rw-r--r--. 1 boincer umatlas       530 Jan 11 07:22 boinc_task_state.xml
[2026-01-11 07:32:40] -rw-r--r--. 1 boincer umatlas      6875 Jan 11 07:30 init_data.xml
[2026-01-11 07:32:40] -rw-------. 1 boincer umatlas  45083477 Jan 11 07:31 HITS.47962010._003035.pool.root.1
[2026-01-11 07:32:40] -rw-------. 1 boincer umatlas      1037 Jan 11 07:31 memory_monitor_summary.json
[2026-01-11 07:32:40] -rw-------. 1 boincer umatlas        95 Jan 11 07:31 pilot_heartbeat.json
[2026-01-11 07:32:40] -rw-------. 1 boincer umatlas   1347858 Jan 11 07:31 log.47962010._003035.job.log.tgz.1
[2026-01-11 07:32:40] -rw-------. 1 boincer umatlas      8561 Jan 11 07:31 heartbeat.json
[2026-01-11 07:32:40] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 07:32 boinc_mmap_file
[2026-01-11 07:32:40] -rw-r--r--. 1 boincer umatlas        27 Jan 11 07:32 wrapper_checkpoint.txt
[2026-01-11 07:32:40] -rw-------. 1 boincer umatlas      5010 Jan 11 07:32 pilotlog.txt
[2026-01-11 07:32:40] -rw-------. 1 boincer umatlas   1067707 Jan 11 07:32 log.47962010._003035.job.log.1
[2026-01-11 07:32:40] -rw-------. 1 boincer umatlas       353 Jan 11 07:32 output.list
[2026-01-11 07:32:40] -rw-r--r--. 1 boincer umatlas       620 Jan 11 07:32 runtime_log
[2026-01-11 07:32:40] -rw-------. 1 boincer umatlas   2437120 Jan 11 07:32 result.tar.gz
[2026-01-11 07:32:40] -rw-------. 1 boincer umatlas       654 Jan 11 07:32 sN2LDm6g7y8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm31mKDmLjuIGm.diag
[2026-01-11 07:32:40] -rw-r--r--. 1 boincer umatlas      9347 Jan 11 07:32 runtime_log.err
[2026-01-11 07:32:40] -rw-r--r--. 1 boincer umatlas     21164 Jan 11 07:32 stderr.txt
[2026-01-11 07:32:40] HITS file was successfully produced:
[2026-01-11 07:32:40] -rw-------. 1 boincer umatlas 45083477 Jan 11 07:31 shared/HITS.pool.root.1
[2026-01-11 07:32:40]  *** Contents of shared directory: ***
[2026-01-11 07:32:40] total 428360
[2026-01-11 07:32:40] -rw-r--r--. 2 boincer umatlas 390503703 Jan 11 05:19 ATLAS.root_0
[2026-01-11 07:32:40] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 05:19 start_atlas.sh
[2026-01-11 07:32:40] -rw-r--r--. 2 boincer umatlas    592610 Jan 11 05:19 input.tar.gz
[2026-01-11 07:32:40] -rw-------. 1 boincer umatlas  45083477 Jan 11 07:31 HITS.pool.root.1
[2026-01-11 07:32:40] -rw-------. 1 boincer umatlas   2437120 Jan 11 07:32 result.tar.gz
07:32:41 (1702741): run_atlas exited; CPU time 16853.949326
07:32:41 (1702741): called boinc_finish(0)

</stderr_txt>
]]>

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