Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:18:47 (1891487): wrapper (7.7.26015): starting
05:18:47 (1891487): wrapper: running run_atlas (--nthreads 8)
[2026-01-11 05:18:47] Arguments: --nthreads 8
[2026-01-11 05:18:47] Threads: 8
[2026-01-11 05:18:47] Checking for CVMFS
[2026-01-11 05:18:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 05:18:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 05:18:47] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 05:18:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 05:18:48] 2.13.3.0 6248 16734 211848 155013 1 59 35046727 40960000 13501 16776704 0 23105437 99.674 19711159 37417 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-11 05:18:48] CVMFS is ok
[2026-01-11 05:18:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 05:18:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 05:18:48] Further information can be found at the LHC@home message board.
[2026-01-11 05:18:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 05:18:48] Checking for apptainer binary...
[2026-01-11 05:18:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 05:18:48] Running /usr/bin/apptainer --version
[2026-01-11 05:18:48] apptainer version 1.4.5-2.el9
[2026-01-11 05:18:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 05:18:49] c-211-35-1.aglt2.org
[2026-01-11 05:18:49] apptainer works
[2026-01-11 05:18:49] Set ATHENA_PROC_NUMBER=8
[2026-01-11 05:18:49] Set ATHENA_CORE_NUMBER=8
[2026-01-11 05:18:49] Starting ATLAS job with PandaID=6966143911
[2026-01-11 05:18:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 06:53:33]  *** The last 200 lines of the pilot log: ***
[2026-01-11 06:53:33]  is_altstaged=None
[2026-01-11 06:53:33]  is_tar=False
[2026-01-11 06:53:33]  lfn=log.47962010._003020.job.log.tgz.1
[2026-01-11 06:53:33]  mtime=0
[2026-01-11 06:53:33]  protocol_id=None
[2026-01-11 06:53:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-11 06:53:33]  replicas=None
[2026-01-11 06:53:33]  scope=mc16_13TeV
[2026-01-11 06:53:33]  status=None
[2026-01-11 06:53:33]  status_code=0
[2026-01-11 06:53:33]  storage_token=
[2026-01-11 06:53:33]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6966143911/log.47962010._003020.job.log.tgz.1
[2026-01-11 06:53:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/e7/02/log.47962010._003020.job.log.tgz.1
[2026-01-11 06:53:33]  workdir=None
[2026-01-11 06:53:33] ]
[2026-01-11 06:53:33] 2026-01-11 11:52:36,388 | INFO     | monitor loop #361: job 0:6966143911 is in state 'stageout'
[2026-01-11 06:53:33] 2026-01-11 11:52:36,400 | WARNING  | aborting job monitor tasks since payload process 1927579 is not running
[2026-01-11 06:53:33] 2026-01-11 11:52:36,415 | INFO     | transferring file log.47962010._003020.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6966143911/log.47962010._003020.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-11 06:53:33] 2026-01-11 11:52:36,415 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6966143911/log.47962010._003020.job.log.tgz.1 /tmp/boinchome/slots/1/log.47962010._003020.job
[2026-01-11 06:53:33] 2026-01-11 11:52:36,436 | INFO     | adding to output.list: log.47962010._003020.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/e7/02/log.47962010._003020.job.log.tgz.
[2026-01-11 06:53:33] 2026-01-11 11:52:36,437 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 06:53:33] 2026-01-11 11:52:36,437 | INFO     | summary of transferred files:
[2026-01-11 06:53:33] 2026-01-11 11:52:36,437 | INFO     |  -- lfn=log.47962010._003020.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 06:53:33] 2026-01-11 11:52:36,437 | INFO     | stage-out finished correctly
[2026-01-11 06:53:33] 2026-01-11 11:52:36,535 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 06:53:33] 2026-01-11 11:52:36,628 | INFO     | job 6966143911 has state=finished
[2026-01-11 06:53:33] 2026-01-11 11:52:36,628 | INFO     | preparing for final server update for job 6966143911 in state='finished'
[2026-01-11 06:53:33] 2026-01-11 11:52:36,702 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-11 06:53:33] 2026-01-11 11:52:36,703 | INFO     | this job has now completed (state=finished)
[2026-01-11 06:53:33] 2026-01-11 11:52:36,703 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 06:53:33] 2026-01-11 11:52:36,703 | INFO     | log transfer has been attempted: DONE
[2026-01-11 06:53:33] 2026-01-11 11:52:36,703 | INFO     | job 6966143911 has finished - writing final server update
[2026-01-11 06:53:33] 2026-01-11 11:52:36,703 | INFO     | total number of processed events: 50 (read)
[2026-01-11 06:53:33] 2026-01-11 11:52:36,704 | INFO     | executing command: lscpu
[2026-01-11 06:53:33] 2026-01-11 11:52:36,764 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 06:53:33] 2026-01-11 11:52:37,475 | INFO     | time since job start (5600s) is within the limit (349056.0s)
[2026-01-11 06:53:33] 2026-01-11 11:52:38,913 | INFO     | monitor loop #362: job 0:6966143911 is in state 'finished'
[2026-01-11 06:53:33] 2026-01-11 11:52:38,913 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 06:53:33] 2026-01-11 11:52:39,480 | INFO     | time since job start (5602s) is within the limit (349056.0s)
[2026-01-11 06:53:33] 2026-01-11 11:52:40,447 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 06:53:33] 2026-01-11 11:52:40,455 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2703.4209374999996
[2026-01-11 06:53:33] 2026-01-11 11:52:40,467 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6966143911/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 06:53:33] 2026-01-11 11:52:40,467 | INFO     | extracted standard info from prmon json
[2026-01-11 06:53:33] 2026-01-11 11:52:40,467 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 06:53:33] 2026-01-11 11:52:40,468 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 06:53:33] 2026-01-11 11:52:40,469 | INFO     | fitting pss+swap vs Time
[2026-01-11 06:53:33] 2026-01-11 11:52:40,469 | INFO     | sum of square deviations: 183611960.98809546
[2026-01-11 06:53:33] 2026-01-11 11:52:40,469 | INFO     | sum of deviations: -1498331043.47619
[2026-01-11 06:53:33] 2026-01-11 11:52:40,470 | INFO     | mean x: 1768129678.6547618
[2026-01-11 06:53:33] 2026-01-11 11:52:40,470 | INFO     | mean y: 2516389.1904761903
[2026-01-11 06:53:33] 2026-01-11 11:52:40,470 | INFO     | intersect: 14431007714.936811
[2026-01-11 06:53:33] 2026-01-11 11:52:40,470 | INFO     | chi2: 0.41807888236535884
[2026-01-11 06:53:33] 2026-01-11 11:52:40,470 | INFO     | current memory leak: -8.16 B/s (using 84 data points, chi2=0.42)
[2026-01-11 06:53:33] 2026-01-11 11:52:40,470 | INFO     | could have reported an average CPU frequency of 2665 MHz (7 samples)
[2026-01-11 06:53:33] 2026-01-11 11:52:40,470 | INFO     | ..............................
[2026-01-11 06:53:33] 2026-01-11 11:52:40,470 | INFO     | . Timing measurements:
[2026-01-11 06:53:33] 2026-01-11 11:52:40,470 | INFO     | . get job = 0 s
[2026-01-11 06:53:33] 2026-01-11 11:52:40,470 | INFO     | . initial setup = 2 s
[2026-01-11 06:53:33] 2026-01-11 11:52:40,470 | INFO     | . payload setup = 23 s
[2026-01-11 06:53:33] 2026-01-11 11:52:40,470 | INFO     | . stage-in = 0 s
[2026-01-11 06:53:33] 2026-01-11 11:52:40,470 | INFO     | . payload execution = 5533 s
[2026-01-11 06:53:33] 2026-01-11 11:52:40,471 | INFO     | . stage-out = 0 s
[2026-01-11 06:53:33] 2026-01-11 11:52:40,471 | INFO     | . log creation = 0 s
[2026-01-11 06:53:33] 2026-01-11 11:52:40,471 | INFO     | ..............................
[2026-01-11 06:53:33] 2026-01-11 11:52:40,581 | INFO     | 
[2026-01-11 06:53:33] 2026-01-11 11:52:40,582 | INFO     | job summary report
[2026-01-11 06:53:33] 2026-01-11 11:52:40,582 | INFO     | --------------------------------------------------
[2026-01-11 06:53:33] 2026-01-11 11:52:40,582 | INFO     | PanDA job id: 6966143911
[2026-01-11 06:53:33] 2026-01-11 11:52:40,582 | INFO     | task id: 47962010
[2026-01-11 06:53:33] 2026-01-11 11:52:40,582 | INFO     | errors: (none)
[2026-01-11 06:53:33] 2026-01-11 11:52:40,582 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 06:53:33] 2026-01-11 11:52:40,582 | INFO     | pilot state: finished 
[2026-01-11 06:53:33] 2026-01-11 11:52:40,582 | INFO     | transexitcode: 0
[2026-01-11 06:53:33] 2026-01-11 11:52:40,582 | INFO     | exeerrorcode: 0
[2026-01-11 06:53:33] 2026-01-11 11:52:40,582 | INFO     | exeerrordiag: 
[2026-01-11 06:53:33] 2026-01-11 11:52:40,582 | INFO     | exitcode: 0
[2026-01-11 06:53:33] 2026-01-11 11:52:40,583 | INFO     | exitmsg: OK
[2026-01-11 06:53:33] 2026-01-11 11:52:40,583 | INFO     | cpuconsumptiontime: 16349 s
[2026-01-11 06:53:33] 2026-01-11 11:52:40,583 | INFO     | nevents: 50
[2026-01-11 06:53:33] 2026-01-11 11:52:40,583 | INFO     | neventsw: 0
[2026-01-11 06:53:33] 2026-01-11 11:52:40,583 | INFO     | pid: 1927579
[2026-01-11 06:53:33] 2026-01-11 11:52:40,583 | INFO     | pgrp: 1927579
[2026-01-11 06:53:33] 2026-01-11 11:52:40,583 | INFO     | corecount: 8
[2026-01-11 06:53:33] 2026-01-11 11:52:40,583 | INFO     | event service: False
[2026-01-11 06:53:33] 2026-01-11 11:52:40,583 | INFO     | sizes: {0: 2284341, 1: 2284596, 2: 2284596, 12: 2284624, 16: 2284914, 23: 2284942, 5559: 2312372, 5561: 2321422, 5565: 2321612}
[2026-01-11 06:53:33] 2026-01-11 11:52:40,583 | INFO     | --------------------------------------------------
[2026-01-11 06:53:33] 2026-01-11 11:52:40,583 | INFO     | 
[2026-01-11 06:53:33] 2026-01-11 11:52:40,583 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-11 06:53:33] 2026-01-11 11:52:40,602 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 06:53:33] 2026-01-11 11:52:40,603 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 06:53:33] 2026-01-11 11:52:40,603 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 06:53:33] 2026-01-11 11:52:40,603 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 06:53:33] 2026-01-11 11:52:40,603 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 06:53:33] 2026-01-11 11:52:40,603 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 06:53:33] 2026-01-11 11:52:40,603 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 06:53:33] 2026-01-11 11:52:40,603 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 06:53:33] 2026-01-11 11:52:40,603 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 06:53:33] 2026-01-11 11:52:40,603 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 06:53:33] 2026-01-11 11:52:40,604 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 06:53:33] 2026-01-11 11:52:40,604 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 06:53:33] 2026-01-11 11:52:40,604 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 06:53:33] 2026-01-11 11:52:40,604 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 06:53:33] 2026-01-11 11:52:40,604 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 06:53:33] 2026-01-11 11:52:40,604 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 06:53:33] 2026-01-11 11:52:40,604 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 06:53:33] 2026-01-11 11:52:40,604 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 06:53:33] 2026-01-11 11:52:40,604 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 06:53:33] 2026-01-11 11:52:40,604 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 06:53:33] 2026-01-11 11:52:40,604 | INFO     | job 6966143911 has completed (purged errors)
[2026-01-11 06:53:33] 2026-01-11 11:52:40,605 | INFO     | overall cleanup function is called
[2026-01-11 06:53:33] 2026-01-11 11:52:41,618 | INFO     | --- collectZombieJob: --- 10, [1927579]
[2026-01-11 06:53:33] 2026-01-11 11:52:41,618 | INFO     | zombie collector waiting for pid 1927579
[2026-01-11 06:53:33] 2026-01-11 11:52:41,618 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 06:53:33] 2026-01-11 11:52:41,618 | INFO     | collected zombie processes
[2026-01-11 06:53:33] 2026-01-11 11:52:41,618 | INFO     | will attempt to kill all subprocesses of pid=1927579
[2026-01-11 06:53:33] 2026-01-11 11:52:41,950 | INFO     | process IDs to be killed: [1927579] (in reverse order)
[2026-01-11 06:53:33] 2026-01-11 11:52:42,052 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 06:53:33] 2026-01-11 11:52:42,052 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 06:53:33] 2026-01-11 11:52:42,061 | INFO     | did not find any defunct processes belonging to 1927579
[2026-01-11 06:53:33] 2026-01-11 11:52:42,070 | INFO     | did not find any defunct processes belonging to 1927579
[2026-01-11 06:53:33] 2026-01-11 11:52:42,071 | INFO     | ready for new job
[2026-01-11 06:53:33] 2026-01-11 11:52:42,071 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 06:53:33] 2026-01-11 11:52:42,072 | INFO     | ***************************************
[2026-01-11 06:53:33] 2026-01-11 11:52:42,072 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 06:53:33] 2026-01-11 11:52:42,072 | INFO     | ***************************************
[2026-01-11 06:53:33] 2026-01-11 11:52:42,072 | INFO     | 
[2026-01-11 06:53:33] 2026-01-11 11:52:42,076 | INFO     | architecture information:
[2026-01-11 06:53:33] 2026-01-11 11:52:42,076 | INFO     | executing command: cat /etc/os-release
[2026-01-11 06:53:33] 2026-01-11 11:52:42,086 | INFO     | cat /etc/os-release:
[2026-01-11 06:53:33] NAME="CentOS Linux"
[2026-01-11 06:53:33] VERSION="7 (Core)"
[2026-01-11 06:53:33] ID="centos"
[2026-01-11 06:53:33] ID_LIKE="rhel fedora"
[2026-01-11 06:53:33] VERSION_ID="7"
[2026-01-11 06:53:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 06:53:33] ANSI_COLOR="0;31"
[2026-01-11 06:53:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 06:53:33] HOME_URL="https://www.centos.org/"
[2026-01-11 06:53:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 06:53:33] 
[2026-01-11 06:53:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 06:53:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 06:53:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 06:53:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 06:53:33] 
[2026-01-11 06:53:33] 2026-01-11 11:52:42,087 | INFO     | ***************************************
[2026-01-11 06:53:33] 2026-01-11 11:52:42,589 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-11 06:53:33] 2026-01-11 11:52:42,608 | INFO     | sufficient remaining disk space (127961923584 B)
[2026-01-11 06:53:33] 2026-01-11 11:52:42,609 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 06:53:33] 2026-01-11 11:52:42,609 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 06:53:33] 2026-01-11 11:52:42,609 | INFO     | update_server=False
[2026-01-11 06:53:33] 2026-01-11 11:52:42,609 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 06:53:33] 2026-01-11 11:52:42,609 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 06:53:33] 2026-01-11 11:52:42,610 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 06:53:33] 2026-01-11 11:52:42,610 | INFO     | aborting loop
[2026-01-11 06:53:33] 2026-01-11 11:52:42,633 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 06:53:33] 2026-01-11 11:52:42,769 | INFO     | all payload control threads have been joined
[2026-01-11 06:53:33] 2026-01-11 11:52:42,834 | INFO     | all data control threads have been joined
[2026-01-11 06:53:33] 2026-01-11 11:52:43,615 | INFO     | [job] retrieve thread has finished
[2026-01-11 06:53:33] 2026-01-11 11:52:43,616 | INFO     | [job] job monitor thread has finished
[2026-01-11 06:53:33] 2026-01-11 11:52:43,749 | INFO     | [payload] validate_post thread has finished
[2026-01-11 06:53:33] 2026-01-11 11:52:43,764 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 06:53:33] 2026-01-11 11:52:43,774 | INFO     | [payload] control thread has finished
[2026-01-11 06:53:33] 2026-01-11 11:52:43,839 | INFO     | [data] control thread has finished
[2026-01-11 06:53:33] 2026-01-11 11:52:44,185 | INFO     | all job control threads have been joined
[2026-01-11 06:53:33] 2026-01-11 11:52:44,540 | INFO     | [job] validate thread has finished
[2026-01-11 06:53:33] 2026-01-11 11:52:44,614 | INFO     | [data] copytool_out thread has finished
[2026-01-11 06:53:33] 2026-01-11 11:52:44,620 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 06:53:33] 2026-01-11 11:52:44,649 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 06:53:33] 2026-01-11 11:52:45,104 | INFO     | [data] copytool_in thread has finished
[2026-01-11 06:53:33] 2026-01-11 11:52:45,168 | INFO     | [payload] failed_post thread has finished
[2026-01-11 06:53:33] 2026-01-11 11:52:45,190 | INFO     | [job] control thread has finished
[2026-01-11 06:53:33] 2026-01-11 11:52:45,541 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 06:53:33] 2026-01-11 11:52:46,546 | INFO     | [job] queue monitor thread has finished
[2026-01-11 06:53:33] 2026-01-11 11:52:46,640 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 06:53:33] 2026-01-11 11:52:52,882 | INFO     | job.realtimelogging is not enabled
[2026-01-11 06:53:33] 2026-01-11 11:52:53,887 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 06:53:33] 2026-01-11 11:53:13,005 | INFO     | PID=1900567 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 06:53:33] 2026-01-11 11:53:13,006 | INFO     | .. there are 14 such processes running
[2026-01-11 06:53:33] 2026-01-11 11:53:13,007 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 06:53:33] 2026-01-11 11:53:13,007 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 06:53:33] 2026-01-11 11:53:13,007 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 06:53:33] 2026-01-11 11:53:26,966 | INFO     | [monitor] cgroup control has ended
[2026-01-11 06:53:33] 2026-01-11 11:53:28,306 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139909111838528)>', '<ExcThread(monitor, started 139908551272192)>']
[2026-01-11 06:53:33] 2026-01-11 11:53:29,084 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 06:53:33] 2026-01-11 11:53:29,084 | INFO     | [monitor] control thread has ended
[2026-01-11 06:53:33] 2026-01-11 11:53:33,331 | INFO     | all workflow threads have been joined
[2026-01-11 06:53:33] 2026-01-11 11:53:33,331 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 06:53:33] 2026-01-11 11:53:33,331 | INFO     | traces error code: 0
[2026-01-11 06:53:33] 2026-01-11 11:53:33,332 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 06:53:33] 2026-01-11 11:53:33,474 [wrapper] ==== pilot stdout END ====
[2026-01-11 06:53:33] 2026-01-11 11:53:33,477 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 06:53:33] 2026-01-11 11:53:33,479 [wrapper] pilotpid: 1900567
[2026-01-11 06:53:33] 2026-01-11 11:53:33,482 [wrapper] Pilot exit status: 0
[2026-01-11 06:53:33] 2026-01-11 11:53:33,491 [wrapper] pandaids: 6966143911
[2026-01-11 06:53:33] 2026-01-11 11:53:33,562 [wrapper] cleanup supervisor_pilot 2072952 1900568
[2026-01-11 06:53:33] 2026-01-11 11:53:33,565 [wrapper] Test setup, not cleaning
[2026-01-11 06:53:33] 2026-01-11 11:53:33,568 [wrapper] apfmon messages muted
[2026-01-11 06:53:33] 2026-01-11 11:53:33,571 [wrapper] ==== wrapper stdout END ====
[2026-01-11 06:53:33] 2026-01-11 11:53:33,574 [wrapper] ==== wrapper stderr END ====
[2026-01-11 06:53:33]  *** Error codes and diagnostics ***
[2026-01-11 06:53:33]     "exeErrorCode": 0,
[2026-01-11 06:53:33]     "exeErrorDiag": "",
[2026-01-11 06:53:33]     "pilotErrorCode": 0,
[2026-01-11 06:53:33]     "pilotErrorDiag": "",
[2026-01-11 06:53:33]  *** Listing of results directory ***
[2026-01-11 06:53:33] total 433220
[2026-01-11 06:53:33] -rw-r--r--. 1 boincer umatlas    579449 Jan 11 05:14 pilot3.tar.gz
[2026-01-11 06:53:33] -rw-r--r--. 1 boincer umatlas      5112 Jan 11 05:17 queuedata.json
[2026-01-11 06:53:33] -rwx------. 1 boincer umatlas     36322 Jan 11 05:17 runpilot2-wrapper.sh
[2026-01-11 06:53:33] -rw-r--r--. 1 boincer umatlas       100 Jan 11 05:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 06:53:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 05:18 run_atlas
[2026-01-11 06:53:33] -rw-r--r--. 1 boincer umatlas       105 Jan 11 05:18 job.xml
[2026-01-11 06:53:33] -rw-r--r--. 2 boincer umatlas 390503703 Jan 11 05:18 EVNT.47962006._000011.pool.root.1
[2026-01-11 06:53:33] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 05:18 start_atlas.sh
[2026-01-11 06:53:33] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 05:18 shared
[2026-01-11 06:53:33] -rw-r--r--. 2 boincer umatlas    592614 Jan 11 05:18 input.tar.gz
[2026-01-11 06:53:33] -rw-r--r--. 1 boincer umatlas         0 Jan 11 05:18 boinc_lockfile
[2026-01-11 06:53:33] -rw-r--r--. 1 boincer umatlas      2889 Jan 11 05:18 pandaJob.out
[2026-01-11 06:53:33] -rw-------. 1 boincer umatlas        57 Jan 11 05:18 setup.sh.local
[2026-01-11 06:53:33] -rw-------. 1 boincer umatlas    989548 Jan 11 05:19 agis_schedconf.cvmfs.json
[2026-01-11 06:53:33] -rw-------. 1 boincer umatlas   1516240 Jan 11 05:19 agis_ddmendpoints.agis.ALL.json
[2026-01-11 06:53:33] drwx------. 5 boincer umatlas      4096 Jan 11 05:19 pilot3
[2026-01-11 06:53:33] -rw-r--r--. 1 boincer umatlas       530 Jan 11 06:42 boinc_task_state.xml
[2026-01-11 06:53:33] -rw-r--r--. 1 boincer umatlas      6859 Jan 11 06:48 init_data.xml
[2026-01-11 06:53:33] -rw-------. 1 boincer umatlas  45254853 Jan 11 06:52 HITS.47962010._003020.pool.root.1
[2026-01-11 06:53:33] -rw-------. 1 boincer umatlas      1036 Jan 11 06:52 memory_monitor_summary.json
[2026-01-11 06:53:33] -rw-------. 1 boincer umatlas   1204267 Jan 11 06:52 log.47962010._003020.job.log.tgz.1
[2026-01-11 06:53:33] -rw-------. 1 boincer umatlas      8586 Jan 11 06:52 heartbeat.json
[2026-01-11 06:53:33] -rw-------. 1 boincer umatlas        95 Jan 11 06:53 pilot_heartbeat.json
[2026-01-11 06:53:33] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 06:53 boinc_mmap_file
[2026-01-11 06:53:33] -rw-r--r--. 1 boincer umatlas        27 Jan 11 06:53 wrapper_checkpoint.txt
[2026-01-11 06:53:33] -rw-------. 1 boincer umatlas      4897 Jan 11 06:53 pilotlog.txt
[2026-01-11 06:53:33] -rw-------. 1 boincer umatlas    763667 Jan 11 06:53 log.47962010._003020.job.log.1
[2026-01-11 06:53:33] -rw-------. 1 boincer umatlas       353 Jan 11 06:53 output.list
[2026-01-11 06:53:33] -rw-r--r--. 1 boincer umatlas       620 Jan 11 06:53 runtime_log
[2026-01-11 06:53:33] -rw-------. 1 boincer umatlas   1986560 Jan 11 06:53 result.tar.gz
[2026-01-11 06:53:33] -rw-------. 1 boincer umatlas       654 Jan 11 06:53 tCXLDm6g7y8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDms1mKDmJqHKyn.diag
[2026-01-11 06:53:33] -rw-r--r--. 1 boincer umatlas      9352 Jan 11 06:53 runtime_log.err
[2026-01-11 06:53:33] -rw-r--r--. 1 boincer umatlas     21572 Jan 11 06:53 stderr.txt
[2026-01-11 06:53:33] HITS file was successfully produced:
[2026-01-11 06:53:33] -rw-------. 1 boincer umatlas 45254853 Jan 11 06:52 shared/HITS.pool.root.1
[2026-01-11 06:53:33]  *** Contents of shared directory: ***
[2026-01-11 06:53:33] total 428092
[2026-01-11 06:53:33] -rw-r--r--. 2 boincer umatlas 390503703 Jan 11 05:18 ATLAS.root_0
[2026-01-11 06:53:33] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 05:18 start_atlas.sh
[2026-01-11 06:53:33] -rw-r--r--. 2 boincer umatlas    592614 Jan 11 05:18 input.tar.gz
[2026-01-11 06:53:33] -rw-------. 1 boincer umatlas  45254853 Jan 11 06:52 HITS.pool.root.1
[2026-01-11 06:53:33] -rw-------. 1 boincer umatlas   1986560 Jan 11 06:53 result.tar.gz
06:53:35 (1891487): run_atlas exited; CPU time 16466.220335
06:53:35 (1891487): called boinc_finish(0)

</stderr_txt>
]]>

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