Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:18:23 (3001297): wrapper (7.7.26015): starting
11:18:23 (3001297): wrapper: running run_atlas (--nthreads 3)
[2026-01-11 11:18:23] Arguments: --nthreads 3
[2026-01-11 11:18:23] Threads: 3
[2026-01-11 11:18:23] Checking for CVMFS
[2026-01-11 11:18:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 11:18:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 11:18:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 11:18:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 11:18:25] 2.9.2.0 3001492 0 30072 155013 3 1 20737529 36864000 0 130560 0 0 0.000 1335 16280 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-11 11:18:25] CVMFS is ok
[2026-01-11 11:18:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 11:18:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 11:18:25] Further information can be found at the LHC@home message board.
[2026-01-11 11:18:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 11:18:25] Checking for apptainer binary...
[2026-01-11 11:18:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 11:18:25] Running /usr/bin/apptainer --version
[2026-01-11 11:18:25] apptainer version 1.4.1-1.1
[2026-01-11 11:18:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 11:18:25] thA327
[2026-01-11 11:18:25] apptainer works
[2026-01-11 11:18:25] Set ATHENA_PROC_NUMBER=3
[2026-01-11 11:18:25] Set ATHENA_CORE_NUMBER=3
[2026-01-11 11:18:25] Starting ATLAS job with PandaID=6966143899
[2026-01-11 11:18:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 11:53:41]  *** The last 200 lines of the pilot log: ***
[2026-01-11 11:53:41] 2026-01-11 10:52:46,107 | INFO     | update_server=False
[2026-01-11 11:53:41] 2026-01-11 10:52:46,107 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 11:53:41] 2026-01-11 10:52:46,107 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 11:53:41] 2026-01-11 10:52:46,107 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 11:53:41] 2026-01-11 10:52:46,107 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 11:53:41] 2026-01-11 10:52:46,132 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 11:53:41] 2026-01-11 10:52:46,132 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 11:53:41] 2026-01-11 10:52:46,132 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-11 11:53:41] 2026-01-11 10:52:46,133 | WARNING  | maxPSS not found in memory monitor output
[2026-01-11 11:53:41] 2026-01-11 10:52:46,133 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6966143899/payload.stdout) since it has not been created yet
[2026-01-11 11:53:41] 2026-01-11 10:52:46,133 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-11 11:53:41] 2026-01-11 10:52:46,142 | INFO     | sufficient remaining disk space (385325465600 B)
[2026-01-11 11:53:41] 2026-01-11 10:52:46,142 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-11 11:53:41] 2026-01-11 10:52:46,142 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6966143899/HITS.47962010._003008.pool.root.1 since it does not exist
[2026-01-11 11:53:41] 2026-01-11 10:52:46,181 | INFO     | number of running child processes to parent process 3012017: 1
[2026-01-11 11:53:41] 2026-01-11 10:52:46,182 | INFO     | maximum number of monitored processes: 8
[2026-01-11 11:53:41] 2026-01-11 10:52:46,182 | INFO     | aborting job monitoring since job object (job id=6966143899) has expired
[2026-01-11 11:53:41] 2026-01-11 10:52:46,182 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 11:53:41] 2026-01-11 10:52:46,182 | INFO     | will abort loop
[2026-01-11 11:53:41] 2026-01-11 10:52:46,472 | INFO     | all data control threads have been joined
[2026-01-11 11:53:41] 2026-01-11 10:52:46,807 | INFO     | all job control threads have been joined
[2026-01-11 11:53:41] 2026-01-11 10:52:47,113 | INFO     | [job] retrieve thread has finished
[2026-01-11 11:53:41] 2026-01-11 10:52:47,113 | INFO     | [job] queue monitor thread has finished
[2026-01-11 11:53:41] 2026-01-11 10:52:47,159 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 11:53:41] 2026-01-11 10:52:47,187 | INFO     | [job] job monitor thread has finished
[2026-01-11 11:53:41] 2026-01-11 10:52:47,274 | INFO     | all payload control threads have been joined
[2026-01-11 11:53:41] 2026-01-11 10:52:47,478 | INFO     | [data] control thread has finished
[2026-01-11 11:53:41] 2026-01-11 10:52:47,539 | INFO     | [payload] failed_post thread has finished
[2026-01-11 11:53:41] 2026-01-11 10:52:47,813 | INFO     | [job] control thread has finished
[2026-01-11 11:53:41] 2026-01-11 10:52:47,925 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 11:53:41] 2026-01-11 10:52:48,003 | INFO     | [data] copytool_in thread has finished
[2026-01-11 11:53:41] 2026-01-11 10:52:48,113 | INFO     | [data] copytool_out thread has finished
[2026-01-11 11:53:41] 2026-01-11 10:52:48,280 | INFO     | [payload] control thread has finished
[2026-01-11 11:53:41] 2026-01-11 10:52:48,452 | INFO     | [payload] validate_post thread has finished
[2026-01-11 11:53:41] 2026-01-11 10:52:48,508 | INFO     | [job] validate thread has finished
[2026-01-11 11:53:41] 2026-01-11 10:52:48,585 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 11:53:41] 2026-01-11 10:52:50,114 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 11:53:41] 2026-01-11 10:52:56,120 | INFO     | job.realtimelogging is not enabled
[2026-01-11 11:53:41] 2026-01-11 10:52:57,125 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 11:53:41] 2026-01-11 10:53:16,984 | INFO     | PID=3005569 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 11:53:41] 2026-01-11 10:53:16,984 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 11:53:41] 2026-01-11 10:53:16,984 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 11:53:41] 2026-01-11 10:53:16,984 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 11:53:41] 2026-01-11 10:53:35,362 | INFO     | [monitor] cgroup control has ended
[2026-01-11 11:53:41] 2026-01-11 10:53:36,433 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140594384111424)>', '<ExcThread(monitor, started 140594034747136)>']
[2026-01-11 11:53:41] 2026-01-11 10:53:37,087 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 11:53:41] 2026-01-11 10:53:37,087 | INFO     | [monitor] control thread has ended
[2026-01-11 11:53:41] 2026-01-11 10:53:41,458 | INFO     | all workflow threads have been joined
[2026-01-11 11:53:41] 2026-01-11 10:53:41,459 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 11:53:41] 2026-01-11 10:53:41,459 | INFO     | traces error code: 0
[2026-01-11 11:53:41] 2026-01-11 10:53:41,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 11:53:41] 2026-01-11 10:53:41,507 [wrapper] ==== pilot stdout END ====
[2026-01-11 11:53:41] 2026-01-11 10:53:41,509 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 11:53:41] 2026-01-11 10:53:41,512 [wrapper] pilotpid: 3005569
[2026-01-11 11:53:41] 2026-01-11 10:53:41,514 [wrapper] Pilot exit status: 0
[2026-01-11 11:53:41] 2026-01-11 10:53:41,521 [wrapper] pandaids: 6966143899
[2026-01-11 11:53:41] 2026-01-11 10:53:41,537 [wrapper] cleanup supervisor_pilot 3018923 3005570
[2026-01-11 11:53:41] 2026-01-11 10:53:41,540 [wrapper] Test setup, not cleaning
[2026-01-11 11:53:41] 2026-01-11 10:53:41,542 [wrapper] apfmon messages muted
[2026-01-11 11:53:41] 2026-01-11 10:53:41,544 [wrapper] ==== wrapper stdout END ====
[2026-01-11 11:53:41] 2026-01-11 10:53:41,547 [wrapper] ==== wrapper stderr END ====
[2026-01-11 11:53:41]  *** Error codes and diagnostics ***
[2026-01-11 11:53:41]     "exeErrorCode": 0,
[2026-01-11 11:53:41]     "exeErrorDiag": "",
[2026-01-11 11:53:41]     "pilotErrorCode": 0,
[2026-01-11 11:53:41]     "pilotErrorDiag": "",
[2026-01-11 11:53:41]  *** Listing of results directory ***
[2026-01-11 11:53:41] total 426860
[2026-01-11 11:53:41] -rw-r--r-- 1 boinc boinc    579449 Jan 11 11:14 pilot3.tar.gz
[2026-01-11 11:53:41] -rw-r--r-- 1 boinc boinc      5112 Jan 11 11:17 queuedata.json
[2026-01-11 11:53:41] -rwx------ 1 boinc boinc     36322 Jan 11 11:17 runpilot2-wrapper.sh
[2026-01-11 11:53:41] -rw-r--r-- 1 boinc boinc       100 Jan 11 11:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 11:53:41] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 11:18 run_atlas
[2026-01-11 11:53:41] -rw-r--r-- 1 boinc boinc       105 Jan 11 11:18 job.xml
[2026-01-11 11:53:41] -rw-r--r-- 2 boinc boinc 390503703 Jan 11 11:18 EVNT.47962006._000011.pool.root.1
[2026-01-11 11:53:41] -rw-r--r-- 2 boinc boinc    592611 Jan 11 11:18 input.tar.gz
[2026-01-11 11:53:41] -rw-r--r-- 2 boinc boinc     15847 Jan 11 11:18 start_atlas.sh
[2026-01-11 11:53:41] drwxrwx--x 2 boinc boinc      4096 Jan 11 11:18 shared
[2026-01-11 11:53:41] -rw-r--r-- 1 boinc boinc         0 Jan 11 11:18 boinc_setup_complete
[2026-01-11 11:53:41] -rw-r--r-- 1 boinc boinc      6446 Jan 11 11:18 init_data.xml
[2026-01-11 11:53:41] -rw-r--r-- 1 boinc boinc         0 Jan 11 11:18 boinc_lockfile
[2026-01-11 11:53:41] -rw-r--r-- 1 boinc boinc      2889 Jan 11 11:18 pandaJob.out
[2026-01-11 11:53:41] -rw------- 1 boinc boinc    989548 Jan 11 11:18 agis_schedconf.cvmfs.json
[2026-01-11 11:53:41] -rw------- 1 boinc boinc   1516240 Jan 11 11:18 agis_ddmendpoints.agis.ALL.json
[2026-01-11 11:53:41] drwx------ 5 boinc boinc      4096 Jan 11 11:18 pilot3
[2026-01-11 11:53:41] -rw-r--r-- 1 boinc boinc       528 Jan 11 11:50 boinc_task_state.xml
[2026-01-11 11:53:41] -rw------- 1 boinc boinc  40773167 Jan 11 11:52 HITS.47962010._003008.pool.root.1
[2026-01-11 11:53:41] -rw------- 1 boinc boinc      1008 Jan 11 11:52 memory_monitor_summary.json
[2026-01-11 11:53:41] -rw------- 1 boinc boinc    623395 Jan 11 11:52 log.47962010._003008.job.log.tgz.1
[2026-01-11 11:53:41] -rw------- 1 boinc boinc        95 Jan 11 11:52 pilot_heartbeat.json
[2026-01-11 11:53:41] -rw------- 1 boinc boinc      8521 Jan 11 11:52 heartbeat.json
[2026-01-11 11:53:41] -rw-r--r-- 1 boinc boinc        26 Jan 11 11:53 wrapper_checkpoint.txt
[2026-01-11 11:53:41] -rw-r--r-- 1 boinc boinc      8192 Jan 11 11:53 boinc_mmap_file
[2026-01-11 11:53:41] -rw------- 1 boinc boinc      6325 Jan 11 11:53 pilotlog.txt
[2026-01-11 11:53:41] -rw------- 1 boinc boinc    338642 Jan 11 11:53 log.47962010._003008.job.log.1
[2026-01-11 11:53:41] -rw------- 1 boinc boinc       353 Jan 11 11:53 output.list
[2026-01-11 11:53:41] -rw-r--r-- 1 boinc boinc       620 Jan 11 11:53 runtime_log
[2026-01-11 11:53:41] -rw------- 1 boinc boinc    983040 Jan 11 11:53 result.tar.gz
[2026-01-11 11:53:41] -rw-r--r-- 1 boinc boinc      8897 Jan 11 11:53 runtime_log.err
[2026-01-11 11:53:41] -rw------- 1 boinc boinc       657 Jan 11 11:53 0dELDm6g7y8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmg1mKDm9pibRo.diag
[2026-01-11 11:53:41] -rw-r--r-- 1 boinc boinc      9148 Jan 11 11:53 stderr.txt
[2026-01-11 11:53:41] HITS file was successfully produced:
[2026-01-11 11:53:41] -rw------- 1 boinc boinc 40773167 Jan 11 11:52 shared/HITS.pool.root.1
[2026-01-11 11:53:41]  *** Contents of shared directory: ***
[2026-01-11 11:53:41] total 422732
[2026-01-11 11:53:41] -rw-r--r-- 2 boinc boinc 390503703 Jan 11 11:18 ATLAS.root_0
[2026-01-11 11:53:41] -rw-r--r-- 2 boinc boinc    592611 Jan 11 11:18 input.tar.gz
[2026-01-11 11:53:41] -rw-r--r-- 2 boinc boinc     15847 Jan 11 11:18 start_atlas.sh
[2026-01-11 11:53:41] -rw------- 1 boinc boinc  40773167 Jan 11 11:52 HITS.pool.root.1
[2026-01-11 11:53:41] -rw------- 1 boinc boinc    983040 Jan 11 11:53 result.tar.gz
11:53:43 (3001297): run_atlas exited; CPU time 4730.580310
11:53:43 (3001297): called boinc_finish(0)

</stderr_txt>
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