Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:30:19 (2369762): wrapper (7.7.26015): starting
03:30:19 (2369762): wrapper: running run_atlas (--nthreads 8)
[2026-01-11 03:30:19] Arguments: --nthreads 8
[2026-01-11 03:30:19] Threads: 8
[2026-01-11 03:30:19] Checking for CVMFS
[2026-01-11 03:30:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 03:30:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 03:30:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 03:30:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 03:30:20] 2.13.3.0 8993 16835 85072 155010 0 66 28280392 40960001 24681 16776704 0 55433929 99.878 27913169 45451 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-11 03:30:20] CVMFS is ok
[2026-01-11 03:30:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 03:30:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 03:30:20] Further information can be found at the LHC@home message board.
[2026-01-11 03:30:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 03:30:20] Checking for apptainer binary...
[2026-01-11 03:30:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 03:30:20] Running /usr/bin/apptainer --version
[2026-01-11 03:30:20] apptainer version 1.4.5-2.el9
[2026-01-11 03:30:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 03:30:20] c-208-40.aglt2.org
[2026-01-11 03:30:20] apptainer works
[2026-01-11 03:30:20] Set ATHENA_PROC_NUMBER=8
[2026-01-11 03:30:20] Set ATHENA_CORE_NUMBER=8
[2026-01-11 03:30:20] Starting ATLAS job with PandaID=6966105359
[2026-01-11 03:30:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 04:12:50]  *** The last 200 lines of the pilot log: ***
[2026-01-11 04:12:50]  is_altstaged=None
[2026-01-11 04:12:50]  is_tar=False
[2026-01-11 04:12:50]  lfn=log.47962010._002991.job.log.tgz.1
[2026-01-11 04:12:50]  mtime=0
[2026-01-11 04:12:50]  protocol_id=None
[2026-01-11 04:12:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-11 04:12:50]  replicas=None
[2026-01-11 04:12:50]  scope=mc16_13TeV
[2026-01-11 04:12:50]  status=None
[2026-01-11 04:12:50]  status_code=0
[2026-01-11 04:12:50]  storage_token=
[2026-01-11 04:12:50]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6966105359/log.47962010._002991.job.log.tgz.1
[2026-01-11 04:12:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/c1/81/log.47962010._002991.job.log.tgz.1
[2026-01-11 04:12:50]  workdir=None
[2026-01-11 04:12:50] ]
[2026-01-11 04:12:50] 2026-01-11 09:12:12,386 | INFO     | transferring file log.47962010._002991.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6966105359/log.47962010._002991.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-11 04:12:50] 2026-01-11 09:12:12,386 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6966105359/log.47962010._002991.job.log.tgz.1 /tmp/boinchome/slots/2/log.47962010._002991.job
[2026-01-11 04:12:50] 2026-01-11 09:12:12,404 | INFO     | adding to output.list: log.47962010._002991.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/c1/81/log.47962010._002991.job.log.tgz.
[2026-01-11 04:12:50] 2026-01-11 09:12:12,404 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 04:12:50] 2026-01-11 09:12:12,404 | INFO     | summary of transferred files:
[2026-01-11 04:12:50] 2026-01-11 09:12:12,404 | INFO     |  -- lfn=log.47962010._002991.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 04:12:50] 2026-01-11 09:12:12,405 | INFO     | stage-out finished correctly
[2026-01-11 04:12:50] 2026-01-11 09:12:12,452 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 04:12:50] 2026-01-11 09:12:12,480 | INFO     | time since job start (2501s) is within the limit (349056.0s)
[2026-01-11 04:12:50] 2026-01-11 09:12:12,746 | INFO     | monitor loop #170: job 0:6966105359 is in state 'finished'
[2026-01-11 04:12:50] 2026-01-11 09:12:12,746 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 04:12:50] 2026-01-11 09:12:13,152 | INFO     | job 6966105359 has state=finished
[2026-01-11 04:12:50] 2026-01-11 09:12:13,153 | INFO     | preparing for final server update for job 6966105359 in state='finished'
[2026-01-11 04:12:50] 2026-01-11 09:12:13,208 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-11 04:12:50] 2026-01-11 09:12:13,209 | INFO     | this job has now completed (state=finished)
[2026-01-11 04:12:50] 2026-01-11 09:12:13,209 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 04:12:50] 2026-01-11 09:12:13,209 | INFO     | log transfer has been attempted: DONE
[2026-01-11 04:12:50] 2026-01-11 09:12:13,209 | INFO     | job 6966105359 has finished - writing final server update
[2026-01-11 04:12:50] 2026-01-11 09:12:13,209 | INFO     | total number of processed events: 50 (read)
[2026-01-11 04:12:50] 2026-01-11 09:12:13,209 | INFO     | executing command: lscpu
[2026-01-11 04:12:50] 2026-01-11 09:12:13,261 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 04:12:50] 2026-01-11 09:12:14,505 | INFO     | time since job start (2503s) is within the limit (349056.0s)
[2026-01-11 04:12:50] 2026-01-11 09:12:15,250 | INFO     | monitor loop #171: job 0:6966105359 is in state 'finished'
[2026-01-11 04:12:50] 2026-01-11 09:12:15,250 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 04:12:50] 2026-01-11 09:12:16,510 | INFO     | time since job start (2505s) is within the limit (349056.0s)
[2026-01-11 04:12:50] 2026-01-11 09:12:17,300 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 04:12:50] 2026-01-11 09:12:17,305 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.0677968750006
[2026-01-11 04:12:50] 2026-01-11 09:12:17,317 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6966105359/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 04:12:50] 2026-01-11 09:12:17,317 | INFO     | extracted standard info from prmon json
[2026-01-11 04:12:50] 2026-01-11 09:12:17,317 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 04:12:50] 2026-01-11 09:12:17,317 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 04:12:50] 2026-01-11 09:12:17,318 | INFO     | fitting pss+swap vs Time
[2026-01-11 04:12:50] 2026-01-11 09:12:17,318 | INFO     | sum of square deviations: 12167335.764705881
[2026-01-11 04:12:50] 2026-01-11 09:12:17,318 | INFO     | sum of deviations: -80260765.41176468
[2026-01-11 04:12:50] 2026-01-11 09:12:17,318 | INFO     | mean x: 1768121575.3529413
[2026-01-11 04:12:50] 2026-01-11 09:12:17,319 | INFO     | mean y: 2559373.617647059
[2026-01-11 04:12:50] 2026-01-11 09:12:17,319 | INFO     | intersect: 11665818588.550032
[2026-01-11 04:12:50] 2026-01-11 09:12:17,319 | INFO     | chi2: 0.12845959103415489
[2026-01-11 04:12:50] 2026-01-11 09:12:17,319 | INFO     | current memory leak: -6.60 B/s (using 34 data points, chi2=0.13)
[2026-01-11 04:12:50] 2026-01-11 09:12:17,319 | INFO     | could have reported an average CPU frequency of 3800 MHz (5 samples)
[2026-01-11 04:12:50] 2026-01-11 09:12:17,319 | INFO     | ..............................
[2026-01-11 04:12:50] 2026-01-11 09:12:17,319 | INFO     | . Timing measurements:
[2026-01-11 04:12:50] 2026-01-11 09:12:17,319 | INFO     | . get job = 0 s
[2026-01-11 04:12:50] 2026-01-11 09:12:17,319 | INFO     | . initial setup = 2 s
[2026-01-11 04:12:50] 2026-01-11 09:12:17,319 | INFO     | . payload setup = 7 s
[2026-01-11 04:12:50] 2026-01-11 09:12:17,319 | INFO     | . stage-in = 0 s
[2026-01-11 04:12:50] 2026-01-11 09:12:17,319 | INFO     | . payload execution = 2472 s
[2026-01-11 04:12:50] 2026-01-11 09:12:17,319 | INFO     | . stage-out = 0 s
[2026-01-11 04:12:50] 2026-01-11 09:12:17,319 | INFO     | . log creation = 0 s
[2026-01-11 04:12:50] 2026-01-11 09:12:17,319 | INFO     | ..............................
[2026-01-11 04:12:50] 2026-01-11 09:12:17,370 | INFO     | 
[2026-01-11 04:12:50] 2026-01-11 09:12:17,370 | INFO     | job summary report
[2026-01-11 04:12:50] 2026-01-11 09:12:17,370 | INFO     | --------------------------------------------------
[2026-01-11 04:12:50] 2026-01-11 09:12:17,370 | INFO     | PanDA job id: 6966105359
[2026-01-11 04:12:50] 2026-01-11 09:12:17,370 | INFO     | task id: 47962010
[2026-01-11 04:12:50] 2026-01-11 09:12:17,370 | INFO     | errors: (none)
[2026-01-11 04:12:50] 2026-01-11 09:12:17,370 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 04:12:50] 2026-01-11 09:12:17,370 | INFO     | pilot state: finished 
[2026-01-11 04:12:50] 2026-01-11 09:12:17,371 | INFO     | transexitcode: 0
[2026-01-11 04:12:50] 2026-01-11 09:12:17,371 | INFO     | exeerrorcode: 0
[2026-01-11 04:12:50] 2026-01-11 09:12:17,371 | INFO     | exeerrordiag: 
[2026-01-11 04:12:50] 2026-01-11 09:12:17,371 | INFO     | exitcode: 0
[2026-01-11 04:12:50] 2026-01-11 09:12:17,371 | INFO     | exitmsg: OK
[2026-01-11 04:12:50] 2026-01-11 09:12:17,371 | INFO     | cpuconsumptiontime: 7932 s
[2026-01-11 04:12:50] 2026-01-11 09:12:17,371 | INFO     | nevents: 50
[2026-01-11 04:12:50] 2026-01-11 09:12:17,371 | INFO     | neventsw: 0
[2026-01-11 04:12:50] 2026-01-11 09:12:17,371 | INFO     | pid: 2402513
[2026-01-11 04:12:50] 2026-01-11 09:12:17,371 | INFO     | pgrp: 2402513
[2026-01-11 04:12:50] 2026-01-11 09:12:17,371 | INFO     | corecount: 8
[2026-01-11 04:12:50] 2026-01-11 09:12:17,371 | INFO     | event service: False
[2026-01-11 04:12:50] 2026-01-11 09:12:17,371 | INFO     | sizes: {0: 2284395, 1: 2284594, 6: 2284856, 11: 2284884, 2484: 2309496, 2485: 2318674, 2490: 2318896}
[2026-01-11 04:12:50] 2026-01-11 09:12:17,371 | INFO     | --------------------------------------------------
[2026-01-11 04:12:50] 2026-01-11 09:12:17,371 | INFO     | 
[2026-01-11 04:12:50] 2026-01-11 09:12:17,371 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-11 04:12:50] 2026-01-11 09:12:17,392 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 04:12:50] 2026-01-11 09:12:17,392 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 04:12:50] 2026-01-11 09:12:17,392 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 04:12:50] 2026-01-11 09:12:17,392 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 04:12:50] 2026-01-11 09:12:17,392 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 04:12:50] 2026-01-11 09:12:17,392 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 04:12:50] 2026-01-11 09:12:17,392 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 04:12:50] 2026-01-11 09:12:17,392 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 04:12:50] 2026-01-11 09:12:17,392 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 04:12:50] 2026-01-11 09:12:17,392 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 04:12:50] 2026-01-11 09:12:17,392 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 04:12:50] 2026-01-11 09:12:17,392 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 04:12:50] 2026-01-11 09:12:17,392 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 04:12:50] 2026-01-11 09:12:17,392 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 04:12:50] 2026-01-11 09:12:17,392 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 04:12:50] 2026-01-11 09:12:17,393 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 04:12:50] 2026-01-11 09:12:17,393 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 04:12:50] 2026-01-11 09:12:17,393 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 04:12:50] 2026-01-11 09:12:17,393 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 04:12:50] 2026-01-11 09:12:17,393 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 04:12:50] 2026-01-11 09:12:17,393 | INFO     | job 6966105359 has completed (purged errors)
[2026-01-11 04:12:50] 2026-01-11 09:12:17,393 | INFO     | overall cleanup function is called
[2026-01-11 04:12:50] 2026-01-11 09:12:18,405 | INFO     | --- collectZombieJob: --- 10, [2402513]
[2026-01-11 04:12:50] 2026-01-11 09:12:18,405 | INFO     | zombie collector waiting for pid 2402513
[2026-01-11 04:12:50] 2026-01-11 09:12:18,405 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 04:12:50] 2026-01-11 09:12:18,405 | INFO     | collected zombie processes
[2026-01-11 04:12:50] 2026-01-11 09:12:18,405 | INFO     | will attempt to kill all subprocesses of pid=2402513
[2026-01-11 04:12:50] 2026-01-11 09:12:18,752 | INFO     | process IDs to be killed: [2402513] (in reverse order)
[2026-01-11 04:12:50] 2026-01-11 09:12:18,877 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 04:12:50] 2026-01-11 09:12:18,877 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 04:12:50] 2026-01-11 09:12:18,894 | INFO     | did not find any defunct processes belonging to 2402513
[2026-01-11 04:12:50] 2026-01-11 09:12:18,908 | INFO     | did not find any defunct processes belonging to 2402513
[2026-01-11 04:12:50] 2026-01-11 09:12:18,908 | INFO     | ready for new job
[2026-01-11 04:12:50] 2026-01-11 09:12:18,908 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 04:12:50] 2026-01-11 09:12:18,909 | INFO     | ***************************************
[2026-01-11 04:12:50] 2026-01-11 09:12:18,909 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 04:12:50] 2026-01-11 09:12:18,909 | INFO     | ***************************************
[2026-01-11 04:12:50] 2026-01-11 09:12:18,909 | INFO     | 
[2026-01-11 04:12:50] 2026-01-11 09:12:18,914 | INFO     | architecture information:
[2026-01-11 04:12:50] 2026-01-11 09:12:18,914 | INFO     | executing command: cat /etc/os-release
[2026-01-11 04:12:50] 2026-01-11 09:12:18,928 | INFO     | cat /etc/os-release:
[2026-01-11 04:12:50] NAME="CentOS Linux"
[2026-01-11 04:12:50] VERSION="7 (Core)"
[2026-01-11 04:12:50] ID="centos"
[2026-01-11 04:12:50] ID_LIKE="rhel fedora"
[2026-01-11 04:12:50] VERSION_ID="7"
[2026-01-11 04:12:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 04:12:50] ANSI_COLOR="0;31"
[2026-01-11 04:12:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 04:12:50] HOME_URL="https://www.centos.org/"
[2026-01-11 04:12:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 04:12:50] 
[2026-01-11 04:12:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 04:12:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 04:12:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 04:12:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 04:12:50] 
[2026-01-11 04:12:50] 2026-01-11 09:12:18,929 | INFO     | ***************************************
[2026-01-11 04:12:50] 2026-01-11 09:12:19,432 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-11 04:12:50] 2026-01-11 09:12:19,445 | INFO     | sufficient remaining disk space (171825954816 B)
[2026-01-11 04:12:50] 2026-01-11 09:12:19,445 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 04:12:50] 2026-01-11 09:12:19,446 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 04:12:50] 2026-01-11 09:12:19,446 | INFO     | update_server=False
[2026-01-11 04:12:50] 2026-01-11 09:12:19,446 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 04:12:50] 2026-01-11 09:12:19,446 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 04:12:50] 2026-01-11 09:12:19,446 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:12:50] 2026-01-11 09:12:19,446 | INFO     | aborting loop
[2026-01-11 04:12:50] 2026-01-11 09:12:19,607 | INFO     | all payload control threads have been joined
[2026-01-11 04:12:50] 2026-01-11 09:12:19,899 | INFO     | all data control threads have been joined
[2026-01-11 04:12:50] 2026-01-11 09:12:20,450 | INFO     | [job] retrieve thread has finished
[2026-01-11 04:12:50] 2026-01-11 09:12:20,451 | INFO     | [job] job monitor thread has finished
[2026-01-11 04:12:50] 2026-01-11 09:12:20,462 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 04:12:50] 2026-01-11 09:12:20,586 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 04:12:50] 2026-01-11 09:12:20,612 | INFO     | [payload] control thread has finished
[2026-01-11 04:12:50] 2026-01-11 09:12:20,766 | INFO     | [job] validate thread has finished
[2026-01-11 04:12:50] 2026-01-11 09:12:20,904 | INFO     | [data] control thread has finished
[2026-01-11 04:12:50] 2026-01-11 09:12:21,109 | INFO     | all job control threads have been joined
[2026-01-11 04:12:50] 2026-01-11 09:12:21,156 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 04:12:50] 2026-01-11 09:12:21,289 | INFO     | [payload] failed_post thread has finished
[2026-01-11 04:12:50] 2026-01-11 09:12:21,373 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 04:12:50] 2026-01-11 09:12:21,615 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 04:12:50] 2026-01-11 09:12:21,810 | INFO     | [payload] validate_post thread has finished
[2026-01-11 04:12:50] 2026-01-11 09:12:21,899 | INFO     | [data] copytool_in thread has finished
[2026-01-11 04:12:50] 2026-01-11 09:12:22,115 | INFO     | [job] control thread has finished
[2026-01-11 04:12:50] 2026-01-11 09:12:22,380 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:12:50] 2026-01-11 09:12:22,467 | INFO     | [data] copytool_out thread has finished
[2026-01-11 04:12:50] 2026-01-11 09:12:23,385 | INFO     | [job] queue monitor thread has finished
[2026-01-11 04:12:50] 2026-01-11 09:12:23,452 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 04:12:50] 2026-01-11 09:12:35,650 | INFO     | [monitor] cgroup control has ended
[2026-01-11 04:12:50] 2026-01-11 09:12:36,907 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140043134248768)>', '<ExcThread(monitor, started 140042861254400)>']
[2026-01-11 04:12:50] 2026-01-11 09:12:41,932 | INFO     | all workflow threads have been joined
[2026-01-11 04:12:50] 2026-01-11 09:12:41,932 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 04:12:50] 2026-01-11 09:12:41,932 | INFO     | traces error code: 0
[2026-01-11 04:12:50] 2026-01-11 09:12:41,933 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 04:12:50] 2026-01-11 09:12:50,011 | INFO     | PID=2379961 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 04:12:50] 2026-01-11 09:12:50,011 | INFO     | .. there are 18 such processes running
[2026-01-11 04:12:50] 2026-01-11 09:12:50,012 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 04:12:50] 2026-01-11 09:12:50,012 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 04:12:50] 2026-01-11 09:12:50,012 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 04:12:50] 2026-01-11 09:12:50,012 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 04:12:50] 2026-01-11 09:12:50,012 | INFO     | [monitor] control thread has ended
[2026-01-11 04:12:50] 2026-01-11 09:12:50,114 [wrapper] ==== pilot stdout END ====
[2026-01-11 04:12:50] 2026-01-11 09:12:50,118 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 04:12:50] 2026-01-11 09:12:50,122 [wrapper] pilotpid: 2379961
[2026-01-11 04:12:50] 2026-01-11 09:12:50,125 [wrapper] Pilot exit status: 0
[2026-01-11 04:12:50] 2026-01-11 09:12:50,134 [wrapper] pandaids: 6966105359
[2026-01-11 04:12:50] 2026-01-11 09:12:50,226 [wrapper] cleanup supervisor_pilot 2482930 2379962
[2026-01-11 04:12:50] 2026-01-11 09:12:50,229 [wrapper] Test setup, not cleaning
[2026-01-11 04:12:50] 2026-01-11 09:12:50,232 [wrapper] apfmon messages muted
[2026-01-11 04:12:50] 2026-01-11 09:12:50,235 [wrapper] ==== wrapper stdout END ====
[2026-01-11 04:12:50] 2026-01-11 09:12:50,238 [wrapper] ==== wrapper stderr END ====
[2026-01-11 04:12:50]  *** Error codes and diagnostics ***
[2026-01-11 04:12:50]     "exeErrorCode": 0,
[2026-01-11 04:12:50]     "exeErrorDiag": "",
[2026-01-11 04:12:50]     "pilotErrorCode": 0,
[2026-01-11 04:12:50]     "pilotErrorDiag": "",
[2026-01-11 04:12:50]  *** Listing of results directory ***
[2026-01-11 04:12:50] total 430916
[2026-01-11 04:12:50] -rw-r--r--. 1 boincer umatlas    579449 Jan 11 03:14 pilot3.tar.gz
[2026-01-11 04:12:50] -rwx------. 1 boincer umatlas     36322 Jan 11 03:29 runpilot2-wrapper.sh
[2026-01-11 04:12:50] -rw-r--r--. 1 boincer umatlas      5112 Jan 11 03:29 queuedata.json
[2026-01-11 04:12:50] -rw-r--r--. 1 boincer umatlas       100 Jan 11 03:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 04:12:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 03:30 run_atlas
[2026-01-11 04:12:50] -rw-r--r--. 1 boincer umatlas       105 Jan 11 03:30 job.xml
[2026-01-11 04:12:50] -rw-r--r--. 2 boincer umatlas 392129520 Jan 11 03:30 EVNT.47962006._000023.pool.root.1
[2026-01-11 04:12:50] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 03:30 start_atlas.sh
[2026-01-11 04:12:50] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 03:30 shared
[2026-01-11 04:12:50] -rw-r--r--. 2 boincer umatlas    592615 Jan 11 03:30 input.tar.gz
[2026-01-11 04:12:50] -rw-r--r--. 1 boincer umatlas         0 Jan 11 03:30 boinc_lockfile
[2026-01-11 04:12:50] -rw-r--r--. 1 boincer umatlas      2888 Jan 11 03:30 pandaJob.out
[2026-01-11 04:12:50] -rw-------. 1 boincer umatlas        57 Jan 11 03:30 setup.sh.local
[2026-01-11 04:12:50] -rw-------. 1 boincer umatlas    989548 Jan 11 03:30 agis_schedconf.cvmfs.json
[2026-01-11 04:12:50] -rw-------. 1 boincer umatlas   1516240 Jan 11 03:30 agis_ddmendpoints.agis.ALL.json
[2026-01-11 04:12:50] drwx------. 5 boincer umatlas      4096 Jan 11 03:30 pilot3
[2026-01-11 04:12:50] -rw-r--r--. 1 boincer umatlas      7183 Jan 11 04:00 init_data.xml
[2026-01-11 04:12:50] -rw-r--r--. 1 boincer umatlas       529 Jan 11 04:06 boinc_task_state.xml
[2026-01-11 04:12:50] -rw-------. 1 boincer umatlas  42115022 Jan 11 04:12 HITS.47962010._002991.pool.root.1
[2026-01-11 04:12:50] -rw-------. 1 boincer umatlas      1024 Jan 11 04:12 memory_monitor_summary.json
[2026-01-11 04:12:50] -rw-------. 1 boincer umatlas   1170001 Jan 11 04:12 log.47962010._002991.job.log.tgz.1
[2026-01-11 04:12:50] -rw-------. 1 boincer umatlas      7850 Jan 11 04:12 heartbeat.json
[2026-01-11 04:12:50] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 04:12 boinc_mmap_file
[2026-01-11 04:12:50] -rw-r--r--. 1 boincer umatlas        26 Jan 11 04:12 wrapper_checkpoint.txt
[2026-01-11 04:12:50] -rw-------. 1 boincer umatlas        95 Jan 11 04:12 pilot_heartbeat.json
[2026-01-11 04:12:50] -rw-------. 1 boincer umatlas       823 Jan 11 04:12 pilotlog.txt
[2026-01-11 04:12:50] -rw-------. 1 boincer umatlas    384672 Jan 11 04:12 log.47962010._002991.job.log.1
[2026-01-11 04:12:50] -rw-------. 1 boincer umatlas       353 Jan 11 04:12 output.list
[2026-01-11 04:12:50] -rw-r--r--. 1 boincer umatlas       620 Jan 11 04:12 runtime_log
[2026-01-11 04:12:50] -rw-------. 1 boincer umatlas   1576960 Jan 11 04:12 result.tar.gz
[2026-01-11 04:12:50] -rw-r--r--. 1 boincer umatlas      9342 Jan 11 04:12 runtime_log.err
[2026-01-11 04:12:50] -rw-------. 1 boincer umatlas       651 Jan 11 04:12 eEwKDm5z5y8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmH1mKDmyhIdUo.diag
[2026-01-11 04:12:50] -rw-r--r--. 1 boincer umatlas     21575 Jan 11 04:12 stderr.txt
[2026-01-11 04:12:50] HITS file was successfully produced:
[2026-01-11 04:12:50] -rw-------. 1 boincer umatlas 42115022 Jan 11 04:12 shared/HITS.pool.root.1
[2026-01-11 04:12:50]  *** Contents of shared directory: ***
[2026-01-11 04:12:50] total 426204
[2026-01-11 04:12:50] -rw-r--r--. 2 boincer umatlas 392129520 Jan 11 03:30 ATLAS.root_0
[2026-01-11 04:12:50] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 03:30 start_atlas.sh
[2026-01-11 04:12:50] -rw-r--r--. 2 boincer umatlas    592615 Jan 11 03:30 input.tar.gz
[2026-01-11 04:12:50] -rw-------. 1 boincer umatlas  42115022 Jan 11 04:12 HITS.pool.root.1
[2026-01-11 04:12:50] -rw-------. 1 boincer umatlas   1576960 Jan 11 04:12 result.tar.gz
04:12:51 (2369762): run_atlas exited; CPU time 7915.343132
04:12:51 (2369762): called boinc_finish(0)

</stderr_txt>
]]>

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