Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:29:58 (2362443): wrapper (7.7.26015): starting
03:29:58 (2362443): wrapper: running run_atlas (--nthreads 8)
[2026-01-11 03:29:58] Arguments: --nthreads 8
[2026-01-11 03:29:58] Threads: 8
[2026-01-11 03:29:58] Checking for CVMFS
[2026-01-11 03:29:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 03:29:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 03:29:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 03:29:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 03:29:58] 2.13.3.0 8993 16835 89040 155010 0 54 28267959 40960001 24557 16776704 0 55418345 99.878 27913169 45451 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-11 03:29:58] CVMFS is ok
[2026-01-11 03:29:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 03:29:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 03:29:58] Further information can be found at the LHC@home message board.
[2026-01-11 03:29:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 03:29:58] Checking for apptainer binary...
[2026-01-11 03:29:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 03:29:58] Running /usr/bin/apptainer --version
[2026-01-11 03:29:59] apptainer version 1.4.5-2.el9
[2026-01-11 03:29:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 03:29:59] c-208-40.aglt2.org
[2026-01-11 03:29:59] apptainer works
[2026-01-11 03:29:59] Set ATHENA_PROC_NUMBER=8
[2026-01-11 03:29:59] Set ATHENA_CORE_NUMBER=8
[2026-01-11 03:29:59] Starting ATLAS job with PandaID=6966105356
[2026-01-11 03:29:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 04:12:39]  *** The last 200 lines of the pilot log: ***
[2026-01-11 04:12:39]  lfn=log.47962010._002988.job.log.tgz.1
[2026-01-11 04:12:39]  mtime=0
[2026-01-11 04:12:39]  protocol_id=None
[2026-01-11 04:12:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-11 04:12:39]  replicas=None
[2026-01-11 04:12:39]  scope=mc16_13TeV
[2026-01-11 04:12:39]  status=None
[2026-01-11 04:12:39]  status_code=0
[2026-01-11 04:12:39]  storage_token=
[2026-01-11 04:12:39]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6966105356/log.47962010._002988.job.log.tgz.1
[2026-01-11 04:12:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/ca/28/log.47962010._002988.job.log.tgz.1
[2026-01-11 04:12:39]  workdir=None
[2026-01-11 04:12:39] ]
[2026-01-11 04:12:39] 2026-01-11 09:11:59,971 | INFO     | transferring file log.47962010._002988.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6966105356/log.47962010._002988.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-11 04:12:39] 2026-01-11 09:11:59,971 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6966105356/log.47962010._002988.job.log.tgz.1 /tmp/boinchome/slots/0/log.47962010._002988.job
[2026-01-11 04:12:39] 2026-01-11 09:11:59,990 | INFO     | adding to output.list: log.47962010._002988.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc16_13TeV/ca/28/log.47962010._002988.job.log.tgz.
[2026-01-11 04:12:39] 2026-01-11 09:11:59,991 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 04:12:39] 2026-01-11 09:11:59,991 | INFO     | summary of transferred files:
[2026-01-11 04:12:39] 2026-01-11 09:11:59,991 | INFO     |  -- lfn=log.47962010._002988.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 04:12:39] 2026-01-11 09:11:59,991 | INFO     | stage-out finished correctly
[2026-01-11 04:12:39] 2026-01-11 09:12:00,125 | INFO     | number of running child processes to parent process 2387220: 1
[2026-01-11 04:12:39] 2026-01-11 09:12:00,125 | INFO     | maximum number of monitored processes: 16
[2026-01-11 04:12:39] 2026-01-11 09:12:01,632 | INFO     | time since job start (2506s) is within the limit (349056.0s)
[2026-01-11 04:12:39] 2026-01-11 09:12:01,861 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 04:12:39] 2026-01-11 09:12:02,617 | INFO     | job 6966105356 has state=finished
[2026-01-11 04:12:39] 2026-01-11 09:12:02,618 | INFO     | preparing for final server update for job 6966105356 in state='finished'
[2026-01-11 04:12:39] 2026-01-11 09:12:02,618 | INFO     | this job has now completed (state=finished)
[2026-01-11 04:12:39] 2026-01-11 09:12:02,618 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 04:12:39] 2026-01-11 09:12:02,618 | INFO     | log transfer has been attempted: DONE
[2026-01-11 04:12:39] 2026-01-11 09:12:02,618 | INFO     | job 6966105356 has finished - writing final server update
[2026-01-11 04:12:39] 2026-01-11 09:12:02,619 | INFO     | total number of processed events: 50 (read)
[2026-01-11 04:12:39] 2026-01-11 09:12:02,619 | INFO     | executing command: lscpu
[2026-01-11 04:12:39] 2026-01-11 09:12:02,629 | INFO     | monitor loop #173: job 0:6966105356 is in state 'finished'
[2026-01-11 04:12:39] 2026-01-11 09:12:02,629 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 04:12:39] 2026-01-11 09:12:02,673 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 04:12:39] 2026-01-11 09:12:03,637 | INFO     | time since job start (2508s) is within the limit (349056.0s)
[2026-01-11 04:12:39] 2026-01-11 09:12:05,132 | INFO     | monitor loop #174: job 0:6966105356 is in state 'finished'
[2026-01-11 04:12:39] 2026-01-11 09:12:05,133 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 04:12:39] 2026-01-11 09:12:05,642 | INFO     | time since job start (2510s) is within the limit (349056.0s)
[2026-01-11 04:12:39] 2026-01-11 09:12:06,783 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 04:12:39] 2026-01-11 09:12:06,787 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.122335937499
[2026-01-11 04:12:39] 2026-01-11 09:12:06,800 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966105356/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 04:12:39] 2026-01-11 09:12:06,800 | INFO     | extracted standard info from prmon json
[2026-01-11 04:12:39] 2026-01-11 09:12:06,800 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 04:12:39] 2026-01-11 09:12:06,800 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 04:12:39] 2026-01-11 09:12:06,801 | INFO     | fitting pss+swap vs Time
[2026-01-11 04:12:39] 2026-01-11 09:12:06,801 | INFO     | sum of square deviations: 12169614.235294128
[2026-01-11 04:12:39] 2026-01-11 09:12:06,801 | INFO     | sum of deviations: 1336525080.705882
[2026-01-11 04:12:39] 2026-01-11 09:12:06,802 | INFO     | mean x: 1768121556.5882354
[2026-01-11 04:12:39] 2026-01-11 09:12:06,802 | INFO     | mean y: 2609421.7647058824
[2026-01-11 04:12:39] 2026-01-11 09:12:06,802 | INFO     | intersect: -194180933328.78217
[2026-01-11 04:12:39] 2026-01-11 09:12:06,802 | INFO     | chi2: 0.018371425472881855
[2026-01-11 04:12:39] 2026-01-11 09:12:06,802 | INFO     | current memory leak: 109.82 B/s (using 34 data points, chi2=0.02)
[2026-01-11 04:12:39] 2026-01-11 09:12:06,802 | INFO     | could have reported an average CPU frequency of 3799 MHz (5 samples)
[2026-01-11 04:12:39] 2026-01-11 09:12:06,802 | INFO     | ..............................
[2026-01-11 04:12:39] 2026-01-11 09:12:06,802 | INFO     | . Timing measurements:
[2026-01-11 04:12:39] 2026-01-11 09:12:06,802 | INFO     | . get job = 0 s
[2026-01-11 04:12:39] 2026-01-11 09:12:06,802 | INFO     | . initial setup = 2 s
[2026-01-11 04:12:39] 2026-01-11 09:12:06,802 | INFO     | . payload setup = 7 s
[2026-01-11 04:12:39] 2026-01-11 09:12:06,802 | INFO     | . stage-in = 0 s
[2026-01-11 04:12:39] 2026-01-11 09:12:06,802 | INFO     | . payload execution = 2476 s
[2026-01-11 04:12:39] 2026-01-11 09:12:06,802 | INFO     | . stage-out = 0 s
[2026-01-11 04:12:39] 2026-01-11 09:12:06,802 | INFO     | . log creation = 0 s
[2026-01-11 04:12:39] 2026-01-11 09:12:06,802 | INFO     | ..............................
[2026-01-11 04:12:39] 2026-01-11 09:12:06,853 | INFO     | 
[2026-01-11 04:12:39] 2026-01-11 09:12:06,853 | INFO     | job summary report
[2026-01-11 04:12:39] 2026-01-11 09:12:06,853 | INFO     | --------------------------------------------------
[2026-01-11 04:12:39] 2026-01-11 09:12:06,853 | INFO     | PanDA job id: 6966105356
[2026-01-11 04:12:39] 2026-01-11 09:12:06,853 | INFO     | task id: 47962010
[2026-01-11 04:12:39] 2026-01-11 09:12:06,853 | INFO     | errors: (none)
[2026-01-11 04:12:39] 2026-01-11 09:12:06,853 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 04:12:39] 2026-01-11 09:12:06,853 | INFO     | pilot state: finished 
[2026-01-11 04:12:39] 2026-01-11 09:12:06,853 | INFO     | transexitcode: 0
[2026-01-11 04:12:39] 2026-01-11 09:12:06,853 | INFO     | exeerrorcode: 0
[2026-01-11 04:12:39] 2026-01-11 09:12:06,853 | INFO     | exeerrordiag: 
[2026-01-11 04:12:39] 2026-01-11 09:12:06,853 | INFO     | exitcode: 0
[2026-01-11 04:12:39] 2026-01-11 09:12:06,853 | INFO     | exitmsg: OK
[2026-01-11 04:12:39] 2026-01-11 09:12:06,853 | INFO     | cpuconsumptiontime: 8031 s
[2026-01-11 04:12:39] 2026-01-11 09:12:06,853 | INFO     | nevents: 50
[2026-01-11 04:12:39] 2026-01-11 09:12:06,854 | INFO     | neventsw: 0
[2026-01-11 04:12:39] 2026-01-11 09:12:06,854 | INFO     | pid: 2387220
[2026-01-11 04:12:39] 2026-01-11 09:12:06,854 | INFO     | pgrp: 2387220
[2026-01-11 04:12:39] 2026-01-11 09:12:06,854 | INFO     | corecount: 8
[2026-01-11 04:12:39] 2026-01-11 09:12:06,854 | INFO     | event service: False
[2026-01-11 04:12:39] 2026-01-11 09:12:06,854 | INFO     | sizes: {0: 2284566, 5: 2284828, 11: 2284884, 2487: 2310840, 2489: 2319834, 2491: 2319890, 2496: 2320296}
[2026-01-11 04:12:39] 2026-01-11 09:12:06,854 | INFO     | --------------------------------------------------
[2026-01-11 04:12:39] 2026-01-11 09:12:06,854 | INFO     | 
[2026-01-11 04:12:39] 2026-01-11 09:12:06,854 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 04:12:39] 2026-01-11 09:12:06,872 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 04:12:39] 2026-01-11 09:12:06,873 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 04:12:39] 2026-01-11 09:12:06,873 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 04:12:39] 2026-01-11 09:12:06,873 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 04:12:39] 2026-01-11 09:12:06,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 04:12:39] 2026-01-11 09:12:06,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 04:12:39] 2026-01-11 09:12:06,873 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 04:12:39] 2026-01-11 09:12:06,873 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 04:12:39] 2026-01-11 09:12:06,873 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 04:12:39] 2026-01-11 09:12:06,873 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 04:12:39] 2026-01-11 09:12:06,873 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 04:12:39] 2026-01-11 09:12:06,873 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 04:12:39] 2026-01-11 09:12:06,873 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 04:12:39] 2026-01-11 09:12:06,873 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 04:12:39] 2026-01-11 09:12:06,873 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 04:12:39] 2026-01-11 09:12:06,873 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 04:12:39] 2026-01-11 09:12:06,873 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 04:12:39] 2026-01-11 09:12:06,873 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 04:12:39] 2026-01-11 09:12:06,873 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 04:12:39] 2026-01-11 09:12:06,873 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 04:12:39] 2026-01-11 09:12:06,874 | INFO     | job 6966105356 has completed (purged errors)
[2026-01-11 04:12:39] 2026-01-11 09:12:06,874 | INFO     | overall cleanup function is called
[2026-01-11 04:12:39] 2026-01-11 09:12:07,887 | INFO     | --- collectZombieJob: --- 10, [2387220]
[2026-01-11 04:12:39] 2026-01-11 09:12:07,887 | INFO     | zombie collector waiting for pid 2387220
[2026-01-11 04:12:39] 2026-01-11 09:12:07,887 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 04:12:39] 2026-01-11 09:12:07,887 | INFO     | collected zombie processes
[2026-01-11 04:12:39] 2026-01-11 09:12:07,888 | INFO     | will attempt to kill all subprocesses of pid=2387220
[2026-01-11 04:12:39] 2026-01-11 09:12:08,258 | INFO     | process IDs to be killed: [2387220] (in reverse order)
[2026-01-11 04:12:39] 2026-01-11 09:12:08,366 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 04:12:39] 2026-01-11 09:12:08,366 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 04:12:39] 2026-01-11 09:12:08,380 | INFO     | did not find any defunct processes belonging to 2387220
[2026-01-11 04:12:39] 2026-01-11 09:12:08,394 | INFO     | did not find any defunct processes belonging to 2387220
[2026-01-11 04:12:39] 2026-01-11 09:12:08,394 | INFO     | ready for new job
[2026-01-11 04:12:39] 2026-01-11 09:12:08,394 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 04:12:39] 2026-01-11 09:12:08,396 | INFO     | ***************************************
[2026-01-11 04:12:39] 2026-01-11 09:12:08,396 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 04:12:39] 2026-01-11 09:12:08,396 | INFO     | ***************************************
[2026-01-11 04:12:39] 2026-01-11 09:12:08,396 | INFO     | 
[2026-01-11 04:12:39] 2026-01-11 09:12:08,401 | INFO     | architecture information:
[2026-01-11 04:12:39] 2026-01-11 09:12:08,402 | INFO     | executing command: cat /etc/os-release
[2026-01-11 04:12:39] 2026-01-11 09:12:08,416 | INFO     | cat /etc/os-release:
[2026-01-11 04:12:39] NAME="CentOS Linux"
[2026-01-11 04:12:39] VERSION="7 (Core)"
[2026-01-11 04:12:39] ID="centos"
[2026-01-11 04:12:39] ID_LIKE="rhel fedora"
[2026-01-11 04:12:39] VERSION_ID="7"
[2026-01-11 04:12:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 04:12:39] ANSI_COLOR="0;31"
[2026-01-11 04:12:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 04:12:39] HOME_URL="https://www.centos.org/"
[2026-01-11 04:12:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 04:12:39] 
[2026-01-11 04:12:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 04:12:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 04:12:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 04:12:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 04:12:39] 
[2026-01-11 04:12:39] 2026-01-11 09:12:08,417 | INFO     | ***************************************
[2026-01-11 04:12:39] 2026-01-11 09:12:08,920 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 04:12:39] 2026-01-11 09:12:08,934 | INFO     | sufficient remaining disk space (171776671744 B)
[2026-01-11 04:12:39] 2026-01-11 09:12:08,935 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 04:12:39] 2026-01-11 09:12:08,935 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 04:12:39] 2026-01-11 09:12:08,935 | INFO     | update_server=False
[2026-01-11 04:12:39] 2026-01-11 09:12:08,935 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 04:12:39] 2026-01-11 09:12:08,935 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:12:39] 2026-01-11 09:12:08,935 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 04:12:39] 2026-01-11 09:12:08,936 | INFO     | aborting loop
[2026-01-11 04:12:39] 2026-01-11 09:12:09,388 | INFO     | all payload control threads have been joined
[2026-01-11 04:12:39] 2026-01-11 09:12:09,580 | INFO     | all job control threads have been joined
[2026-01-11 04:12:39] 2026-01-11 09:12:09,901 | INFO     | all data control threads have been joined
[2026-01-11 04:12:39] 2026-01-11 09:12:09,940 | INFO     | [job] retrieve thread has finished
[2026-01-11 04:12:39] 2026-01-11 09:12:09,941 | INFO     | [job] job monitor thread has finished
[2026-01-11 04:12:39] 2026-01-11 09:12:09,958 | INFO     | [data] copytool_in thread has finished
[2026-01-11 04:12:39] 2026-01-11 09:12:10,182 | INFO     | [payload] failed_post thread has finished
[2026-01-11 04:12:39] 2026-01-11 09:12:10,299 | INFO     | [payload] validate_post thread has finished
[2026-01-11 04:12:39] 2026-01-11 09:12:10,389 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 04:12:39] 2026-01-11 09:12:10,393 | INFO     | [payload] control thread has finished
[2026-01-11 04:12:39] 2026-01-11 09:12:10,585 | INFO     | [job] control thread has finished
[2026-01-11 04:12:39] 2026-01-11 09:12:10,906 | INFO     | [data] control thread has finished
[2026-01-11 04:12:39] 2026-01-11 09:12:10,941 | INFO     | [data] copytool_out thread has finished
[2026-01-11 04:12:39] 2026-01-11 09:12:10,973 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 04:12:39] 2026-01-11 09:12:11,045 | INFO     | [job] validate thread has finished
[2026-01-11 04:12:39] 2026-01-11 09:12:11,242 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 04:12:39] 2026-01-11 09:12:11,863 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:12:39] 2026-01-11 09:12:12,420 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 04:12:39] 2026-01-11 09:12:12,869 | INFO     | [job] queue monitor thread has finished
[2026-01-11 04:12:39] 2026-01-11 09:12:16,426 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 04:12:39] 2026-01-11 09:12:19,031 | INFO     | [monitor] cgroup control has ended
[2026-01-11 04:12:39] 2026-01-11 09:12:19,818 | INFO     | job.realtimelogging is not enabled
[2026-01-11 04:12:39] 2026-01-11 09:12:20,823 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 04:12:39] 2026-01-11 09:12:22,113 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139968121259840)>', '<ExcThread(monitor, started 139967682574080)>']
[2026-01-11 04:12:39] 2026-01-11 09:12:27,138 | INFO     | all workflow threads have been joined
[2026-01-11 04:12:39] 2026-01-11 09:12:27,140 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 04:12:39] 2026-01-11 09:12:27,140 | INFO     | traces error code: 0
[2026-01-11 04:12:39] 2026-01-11 09:12:27,140 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 04:12:39] 2026-01-11 09:12:39,144 | INFO     | PID=2367600 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 04:12:39] 2026-01-11 09:12:39,144 | INFO     | .. there are 19 such processes running
[2026-01-11 04:12:39] 2026-01-11 09:12:39,144 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 04:12:39] 2026-01-11 09:12:39,144 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 04:12:39] 2026-01-11 09:12:39,144 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 04:12:39] 2026-01-11 09:12:39,144 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 04:12:39] 2026-01-11 09:12:39,144 | INFO     | [monitor] control thread has ended
[2026-01-11 04:12:39] 2026-01-11 09:12:39,238 [wrapper] ==== pilot stdout END ====
[2026-01-11 04:12:39] 2026-01-11 09:12:39,241 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 04:12:39] 2026-01-11 09:12:39,243 [wrapper] pilotpid: 2367600
[2026-01-11 04:12:39] 2026-01-11 09:12:39,246 [wrapper] Pilot exit status: 0
[2026-01-11 04:12:39] 2026-01-11 09:12:39,256 [wrapper] pandaids: 6966105356
[2026-01-11 04:12:39] 2026-01-11 09:12:39,350 [wrapper] cleanup supervisor_pilot 2480473 2367601
[2026-01-11 04:12:39] 2026-01-11 09:12:39,354 [wrapper] Test setup, not cleaning
[2026-01-11 04:12:39] 2026-01-11 09:12:39,357 [wrapper] apfmon messages muted
[2026-01-11 04:12:39] 2026-01-11 09:12:39,360 [wrapper] ==== wrapper stdout END ====
[2026-01-11 04:12:39] 2026-01-11 09:12:39,362 [wrapper] ==== wrapper stderr END ====
[2026-01-11 04:12:39]  *** Error codes and diagnostics ***
[2026-01-11 04:12:39]     "exeErrorCode": 0,
[2026-01-11 04:12:39]     "exeErrorDiag": "",
[2026-01-11 04:12:39]     "pilotErrorCode": 0,
[2026-01-11 04:12:39]     "pilotErrorDiag": "",
[2026-01-11 04:12:39]  *** Listing of results directory ***
[2026-01-11 04:12:39] total 435508
[2026-01-11 04:12:39] -rw-r--r--. 1 boincer umatlas    579449 Jan 11 03:14 pilot3.tar.gz
[2026-01-11 04:12:39] -rwx------. 1 boincer umatlas     36322 Jan 11 03:29 runpilot2-wrapper.sh
[2026-01-11 04:12:39] -rw-r--r--. 1 boincer umatlas      5112 Jan 11 03:29 queuedata.json
[2026-01-11 04:12:39] -rw-r--r--. 1 boincer umatlas       100 Jan 11 03:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 04:12:39] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 03:29 run_atlas
[2026-01-11 04:12:39] -rw-r--r--. 1 boincer umatlas       105 Jan 11 03:29 job.xml
[2026-01-11 04:12:39] -rw-r--r--. 2 boincer umatlas 392129520 Jan 11 03:29 EVNT.47962006._000023.pool.root.1
[2026-01-11 04:12:39] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 03:29 start_atlas.sh
[2026-01-11 04:12:39] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 03:29 shared
[2026-01-11 04:12:39] -rw-r--r--. 2 boincer umatlas    592616 Jan 11 03:29 input.tar.gz
[2026-01-11 04:12:39] -rw-r--r--. 1 boincer umatlas         0 Jan 11 03:29 boinc_lockfile
[2026-01-11 04:12:39] -rw-r--r--. 1 boincer umatlas      2888 Jan 11 03:29 pandaJob.out
[2026-01-11 04:12:39] -rw-------. 1 boincer umatlas        57 Jan 11 03:30 setup.sh.local
[2026-01-11 04:12:39] -rw-------. 1 boincer umatlas    989548 Jan 11 03:30 agis_schedconf.cvmfs.json
[2026-01-11 04:12:39] -rw-------. 1 boincer umatlas   1516240 Jan 11 03:30 agis_ddmendpoints.agis.ALL.json
[2026-01-11 04:12:39] drwx------. 5 boincer umatlas      4096 Jan 11 03:30 pilot3
[2026-01-11 04:12:39] -rw-r--r--. 1 boincer umatlas      7183 Jan 11 04:00 init_data.xml
[2026-01-11 04:12:39] -rw-r--r--. 1 boincer umatlas       528 Jan 11 04:08 boinc_task_state.xml
[2026-01-11 04:12:39] -rw-------. 1 boincer umatlas  46793150 Jan 11 04:11 HITS.47962010._002988.pool.root.1
[2026-01-11 04:12:39] -rw-------. 1 boincer umatlas      1034 Jan 11 04:11 memory_monitor_summary.json
[2026-01-11 04:12:39] -rw-------. 1 boincer umatlas        95 Jan 11 04:11 pilot_heartbeat.json
[2026-01-11 04:12:39] -rw-------. 1 boincer umatlas   1172084 Jan 11 04:11 log.47962010._002988.job.log.tgz.1
[2026-01-11 04:12:39] -rw-------. 1 boincer umatlas      8542 Jan 11 04:12 heartbeat.json
[2026-01-11 04:12:39] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 04:12 boinc_mmap_file
[2026-01-11 04:12:39] -rw-r--r--. 1 boincer umatlas        26 Jan 11 04:12 wrapper_checkpoint.txt
[2026-01-11 04:12:39] -rw-------. 1 boincer umatlas       823 Jan 11 04:12 pilotlog.txt
[2026-01-11 04:12:39] -rw-------. 1 boincer umatlas    389582 Jan 11 04:12 log.47962010._002988.job.log.1
[2026-01-11 04:12:39] -rw-------. 1 boincer umatlas       353 Jan 11 04:12 output.list
[2026-01-11 04:12:39] -rw-r--r--. 1 boincer umatlas       620 Jan 11 04:12 runtime_log
[2026-01-11 04:12:39] -rw-------. 1 boincer umatlas   1576960 Jan 11 04:12 result.tar.gz
[2026-01-11 04:12:39] -rw-r--r--. 1 boincer umatlas      9342 Jan 11 04:12 runtime_log.err
[2026-01-11 04:12:39] -rw-------. 1 boincer umatlas       654 Jan 11 04:12 JwrKDm5z5y8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmE1mKDmOsCE1n.diag
[2026-01-11 04:12:39] -rw-r--r--. 1 boincer umatlas     21699 Jan 11 04:12 stderr.txt
[2026-01-11 04:12:39] HITS file was successfully produced:
[2026-01-11 04:12:39] -rw-------. 1 boincer umatlas 46793150 Jan 11 04:11 shared/HITS.pool.root.1
[2026-01-11 04:12:39]  *** Contents of shared directory: ***
[2026-01-11 04:12:39] total 430780
[2026-01-11 04:12:39] -rw-r--r--. 2 boincer umatlas 392129520 Jan 11 03:29 ATLAS.root_0
[2026-01-11 04:12:39] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 03:29 start_atlas.sh
[2026-01-11 04:12:39] -rw-r--r--. 2 boincer umatlas    592616 Jan 11 03:29 input.tar.gz
[2026-01-11 04:12:39] -rw-------. 1 boincer umatlas  46793150 Jan 11 04:11 HITS.pool.root.1
[2026-01-11 04:12:39] -rw-------. 1 boincer umatlas   1576960 Jan 11 04:12 result.tar.gz
04:12:41 (2362443): run_atlas exited; CPU time 8012.250588
04:12:41 (2362443): called boinc_finish(0)

</stderr_txt>
]]>

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