Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:04:21 (249546): wrapper (7.7.26015): starting
02:04:21 (249546): wrapper: running run_atlas (--nthreads 9)
[2026-01-11 02:04:21] Arguments: --nthreads 9
[2026-01-11 02:04:21] Threads: 9
[2026-01-11 02:04:21] Checking for CVMFS
[2026-01-11 02:04:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 02:04:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 02:04:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 02:04:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 02:04:23] 2.13.3.0 5206 73053 763568 155007 2 656 22780501 40960001 44758 16776704 0 664192267 99.814 315037514 29747 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-11 02:04:23] CVMFS is ok
[2026-01-11 02:04:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 02:04:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 02:04:23] Further information can be found at the LHC@home message board.
[2026-01-11 02:04:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 02:04:23] Checking for apptainer binary...
[2026-01-11 02:04:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 02:04:23] Running /usr/bin/apptainer --version
[2026-01-11 02:04:23] apptainer version 1.4.5-2.el9
[2026-01-11 02:04:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 02:04:24] lc-12-9.aglt2.org
[2026-01-11 02:04:24] apptainer works
[2026-01-11 02:04:24] Set ATHENA_PROC_NUMBER=9
[2026-01-11 02:04:24] Set ATHENA_CORE_NUMBER=9
[2026-01-11 02:04:24] Starting ATLAS job with PandaID=6962918531
[2026-01-11 02:04:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 08:04:23]  *** The last 200 lines of the pilot log: ***
[2026-01-11 08:04:23] 2026-01-11 13:03:23,786 | INFO     | monitor loop #1238: job 0:6962918531 is in state 'finished'
[2026-01-11 08:04:23] 2026-01-11 13:03:23,787 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 08:04:23] 2026-01-11 13:03:25,786 | INFO     | time since job start (21492s) is within the limit (174528.0s)
[2026-01-11 08:04:23] 2026-01-11 13:03:26,291 | INFO     | monitor loop #1239: job 0:6962918531 is in state 'finished'
[2026-01-11 08:04:23] 2026-01-11 13:03:26,291 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 08:04:23] 2026-01-11 13:03:27,793 | INFO     | time since job start (21494s) is within the limit (174528.0s)
[2026-01-11 08:04:23] 2026-01-11 13:03:28,797 | INFO     | monitor loop #1240: job 0:6962918531 is in state 'finished'
[2026-01-11 08:04:23] 2026-01-11 13:03:28,797 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 08:04:23] 2026-01-11 13:03:29,076 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 08:04:23] 2026-01-11 13:03:29,086 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2748.194385416668
[2026-01-11 08:04:23] 2026-01-11 13:03:29,105 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6962918531/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 08:04:23] 2026-01-11 13:03:29,105 | INFO     | extracted standard info from prmon json
[2026-01-11 08:04:23] 2026-01-11 13:03:29,106 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 08:04:23] 2026-01-11 13:03:29,106 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 08:04:23] 2026-01-11 13:03:29,106 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 08:04:23] 2026-01-11 13:03:29,106 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 08:04:23] 2026-01-11 13:03:29,122 | INFO     | fitting pss+swap vs Time
[2026-01-11 08:04:23] 2026-01-11 13:03:29,123 | INFO     | sum of square deviations: 13408988311.082588
[2026-01-11 08:04:23] 2026-01-11 13:03:29,135 | INFO     | sum of deviations: 98290162779.64952
[2026-01-11 08:04:23] 2026-01-11 13:03:29,135 | INFO     | mean x: 1768125912.0911682
[2026-01-11 08:04:23] 2026-01-11 13:03:29,135 | INFO     | mean y: 2539458.8547008545
[2026-01-11 08:04:23] 2026-01-11 13:03:29,135 | INFO     | intersect: -12958123917.271858
[2026-01-11 08:04:23] 2026-01-11 13:03:29,136 | INFO     | chi2: 2.8082978462577195
[2026-01-11 08:04:23] 2026-01-11 13:03:29,136 | INFO     | sum of square deviations: 12844085153.540438
[2026-01-11 08:04:23] 2026-01-11 13:03:29,143 | INFO     | sum of deviations: 119012178176.2718
[2026-01-11 08:04:23] 2026-01-11 13:03:29,143 | INFO     | mean x: 1768125759.5924857
[2026-01-11 08:04:23] 2026-01-11 13:03:29,144 | INFO     | mean y: 2544982.3352601156
[2026-01-11 08:04:23] 2026-01-11 13:03:29,144 | INFO     | intersect: -16380754834.131058
[2026-01-11 08:04:23] 2026-01-11 13:03:29,144 | INFO     | chi2: 2.119947380926182
[2026-01-11 08:04:23] 2026-01-11 13:03:29,144 | INFO     | current chi2=2.119947380926182 (change=24.51130553152755 %)
[2026-01-11 08:04:23] 2026-01-11 13:03:29,144 | INFO     | right removable region: 345
[2026-01-11 08:04:23] 2026-01-11 13:03:29,145 | INFO     | sum of square deviations: 12844065633.540438
[2026-01-11 08:04:23] 2026-01-11 13:03:29,152 | INFO     | sum of deviations: 21311933728.375717
[2026-01-11 08:04:23] 2026-01-11 13:03:29,152 | INFO     | mean x: 1768126064.5924857
[2026-01-11 08:04:23] 2026-01-11 13:03:29,152 | INFO     | mean y: 2560159.1445086705
[2026-01-11 08:04:23] 2026-01-11 13:03:29,152 | INFO     | intersect: -2931260531.837261
[2026-01-11 08:04:23] 2026-01-11 13:03:29,153 | INFO     | chi2: 0.7989648064567973
[2026-01-11 08:04:23] 2026-01-11 13:03:29,153 | INFO     | current chi2=0.7989648064567973 (change=71.5498551009651 %)
[2026-01-11 08:04:23] 2026-01-11 13:03:29,153 | INFO     | sum of square deviations: 12295236280.997066
[2026-01-11 08:04:23] 2026-01-11 13:03:29,156 | INFO     | sum of deviations: 4718710750.967728
[2026-01-11 08:04:23] 2026-01-11 13:03:29,156 | INFO     | mean x: 1768126217.0938416
[2026-01-11 08:04:23] 2026-01-11 13:03:29,157 | INFO     | mean y: 2564749.0322580645
[2026-01-11 08:04:23] 2026-01-11 13:03:29,157 | INFO     | intersect: -676013197.661095
[2026-01-11 08:04:23] 2026-01-11 13:03:29,157 | INFO     | chi2: 0.70558770702727
[2026-01-11 08:04:23] 2026-01-11 13:03:29,157 | INFO     | current chi2=0.70558770702727 (change=11.687260649643711 %)
[2026-01-11 08:04:23] 2026-01-11 13:03:29,157 | INFO     | left removable region: 20
[2026-01-11 08:04:23] 2026-01-11 13:03:29,158 | INFO     | sum of square deviations: 10644464650.043028
[2026-01-11 08:04:23] 2026-01-11 13:03:29,160 | INFO     | sum of deviations: 19730218818.74769
[2026-01-11 08:04:23] 2026-01-11 13:03:29,166 | INFO     | mean x: 1768126339.0953846
[2026-01-11 08:04:23] 2026-01-11 13:03:29,166 | INFO     | mean y: 2572651.2984615383
[2026-01-11 08:04:23] 2026-01-11 13:03:29,166 | INFO     | intersect: -3274766389.8342643
[2026-01-11 08:04:23] 2026-01-11 13:03:29,166 | INFO     | chi2: 0.0013772857070864539
[2026-01-11 08:04:23] 2026-01-11 13:03:29,166 | INFO     | current memory leak: 1.85 B/s (using 325 data points, chi2=0.00)
[2026-01-11 08:04:23] 2026-01-11 13:03:29,167 | INFO     | could have reported an average CPU frequency of 2728 MHz (15 samples)
[2026-01-11 08:04:23] 2026-01-11 13:03:29,167 | INFO     | ..............................
[2026-01-11 08:04:23] 2026-01-11 13:03:29,167 | INFO     | . Timing measurements:
[2026-01-11 08:04:23] 2026-01-11 13:03:29,167 | INFO     | . get job = 0 s
[2026-01-11 08:04:23] 2026-01-11 13:03:29,168 | INFO     | . initial setup = 3 s
[2026-01-11 08:04:23] 2026-01-11 13:03:29,168 | INFO     | . payload setup = 31 s
[2026-01-11 08:04:23] 2026-01-11 13:03:29,168 | INFO     | . stage-in = 0 s
[2026-01-11 08:04:23] 2026-01-11 13:03:29,168 | INFO     | . payload execution = 21383 s
[2026-01-11 08:04:23] 2026-01-11 13:03:29,168 | INFO     | . stage-out = 2 s
[2026-01-11 08:04:23] 2026-01-11 13:03:29,168 | INFO     | . log creation = 0 s
[2026-01-11 08:04:23] 2026-01-11 13:03:29,168 | INFO     | ..............................
[2026-01-11 08:04:23] 2026-01-11 13:03:29,682 | INFO     | 
[2026-01-11 08:04:23] 2026-01-11 13:03:29,682 | INFO     | job summary report
[2026-01-11 08:04:23] 2026-01-11 13:03:29,682 | INFO     | --------------------------------------------------
[2026-01-11 08:04:23] 2026-01-11 13:03:29,682 | INFO     | PanDA job id: 6962918531
[2026-01-11 08:04:23] 2026-01-11 13:03:29,682 | INFO     | task id: 47898826
[2026-01-11 08:04:23] 2026-01-11 13:03:29,682 | INFO     | errors: (none)
[2026-01-11 08:04:23] 2026-01-11 13:03:29,682 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 08:04:23] 2026-01-11 13:03:29,682 | INFO     | pilot state: finished 
[2026-01-11 08:04:23] 2026-01-11 13:03:29,682 | INFO     | transexitcode: 0
[2026-01-11 08:04:23] 2026-01-11 13:03:29,682 | INFO     | exeerrorcode: 0
[2026-01-11 08:04:23] 2026-01-11 13:03:29,682 | INFO     | exeerrordiag: 
[2026-01-11 08:04:23] 2026-01-11 13:03:29,683 | INFO     | exitcode: 0
[2026-01-11 08:04:23] 2026-01-11 13:03:29,683 | INFO     | exitmsg: OK
[2026-01-11 08:04:23] 2026-01-11 13:03:29,683 | INFO     | cpuconsumptiontime: 63402 s
[2026-01-11 08:04:23] 2026-01-11 13:03:29,683 | INFO     | nevents: 400
[2026-01-11 08:04:23] 2026-01-11 13:03:29,683 | INFO     | neventsw: 0
[2026-01-11 08:04:23] 2026-01-11 13:03:29,683 | INFO     | pid: 289101
[2026-01-11 08:04:23] 2026-01-11 13:03:29,683 | INFO     | pgrp: 289101
[2026-01-11 08:04:23] 2026-01-11 13:03:29,683 | INFO     | corecount: 9
[2026-01-11 08:04:23] 2026-01-11 13:03:29,683 | INFO     | event service: False
[2026-01-11 08:04:23] 2026-01-11 13:03:29,683 | INFO     | sizes: {0: 2283798, 1: 2283826, 2: 2283997, 13: 2284025, 24: 2284081, 28: 2284371, 35: 2284527, 21418: 2317963, 21421: 2326961, 21424: 2327017, 21434: 2327211}
[2026-01-11 08:04:23] 2026-01-11 13:03:29,683 | INFO     | --------------------------------------------------
[2026-01-11 08:04:23] 2026-01-11 13:03:29,683 | INFO     | 
[2026-01-11 08:04:23] 2026-01-11 13:03:29,683 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-11 08:04:23] 2026-01-11 13:03:29,730 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 08:04:23] 2026-01-11 13:03:29,730 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 08:04:23] 2026-01-11 13:03:29,730 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 08:04:23] 2026-01-11 13:03:29,730 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 08:04:23] 2026-01-11 13:03:29,730 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 08:04:23] 2026-01-11 13:03:29,730 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 08:04:23] 2026-01-11 13:03:29,731 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 08:04:23] 2026-01-11 13:03:29,731 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 08:04:23] 2026-01-11 13:03:29,731 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 08:04:23] 2026-01-11 13:03:29,731 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 08:04:23] 2026-01-11 13:03:29,731 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 08:04:23] 2026-01-11 13:03:29,731 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 08:04:23] 2026-01-11 13:03:29,731 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 08:04:23] 2026-01-11 13:03:29,731 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 08:04:23] 2026-01-11 13:03:29,731 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 08:04:23] 2026-01-11 13:03:29,731 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 08:04:23] 2026-01-11 13:03:29,731 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 08:04:23] 2026-01-11 13:03:29,731 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 08:04:23] 2026-01-11 13:03:29,731 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 08:04:23] 2026-01-11 13:03:29,732 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 08:04:23] 2026-01-11 13:03:29,732 | INFO     | job 6962918531 has completed (purged errors)
[2026-01-11 08:04:23] 2026-01-11 13:03:29,732 | INFO     | overall cleanup function is called
[2026-01-11 08:04:23] 2026-01-11 13:03:30,742 | INFO     | --- collectZombieJob: --- 10, [289101]
[2026-01-11 08:04:23] 2026-01-11 13:03:30,742 | INFO     | zombie collector waiting for pid 289101
[2026-01-11 08:04:23] 2026-01-11 13:03:30,742 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 08:04:23] 2026-01-11 13:03:30,742 | INFO     | collected zombie processes
[2026-01-11 08:04:23] 2026-01-11 13:03:30,742 | INFO     | will attempt to kill all subprocesses of pid=289101
[2026-01-11 08:04:23] 2026-01-11 13:03:31,429 | INFO     | process IDs to be killed: [289101] (in reverse order)
[2026-01-11 08:04:23] 2026-01-11 13:03:31,646 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 08:04:23] 2026-01-11 13:03:31,646 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 08:04:23] 2026-01-11 13:03:31,672 | INFO     | did not find any defunct processes belonging to 289101
[2026-01-11 08:04:23] 2026-01-11 13:03:31,700 | INFO     | did not find any defunct processes belonging to 289101
[2026-01-11 08:04:23] 2026-01-11 13:03:31,700 | INFO     | ready for new job
[2026-01-11 08:04:23] 2026-01-11 13:03:31,700 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 08:04:23] 2026-01-11 13:03:31,702 | INFO     | ***************************************
[2026-01-11 08:04:23] 2026-01-11 13:03:31,703 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 08:04:23] 2026-01-11 13:03:31,703 | INFO     | ***************************************
[2026-01-11 08:04:23] 2026-01-11 13:03:31,703 | INFO     | 
[2026-01-11 08:04:23] 2026-01-11 13:03:31,708 | INFO     | architecture information:
[2026-01-11 08:04:23] 2026-01-11 13:03:31,708 | INFO     | executing command: cat /etc/os-release
[2026-01-11 08:04:23] 2026-01-11 13:03:31,727 | INFO     | cat /etc/os-release:
[2026-01-11 08:04:23] NAME="CentOS Linux"
[2026-01-11 08:04:23] VERSION="7 (Core)"
[2026-01-11 08:04:23] ID="centos"
[2026-01-11 08:04:23] ID_LIKE="rhel fedora"
[2026-01-11 08:04:23] VERSION_ID="7"
[2026-01-11 08:04:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 08:04:23] ANSI_COLOR="0;31"
[2026-01-11 08:04:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 08:04:23] HOME_URL="https://www.centos.org/"
[2026-01-11 08:04:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 08:04:23] 
[2026-01-11 08:04:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 08:04:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 08:04:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 08:04:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 08:04:23] 
[2026-01-11 08:04:23] 2026-01-11 13:03:31,727 | INFO     | ***************************************
[2026-01-11 08:04:23] 2026-01-11 13:03:32,231 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-11 08:04:23] 2026-01-11 13:03:32,265 | INFO     | sufficient remaining disk space (421612486656 B)
[2026-01-11 08:04:23] 2026-01-11 13:03:32,266 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 08:04:23] 2026-01-11 13:03:32,266 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 08:04:23] 2026-01-11 13:03:32,266 | INFO     | update_server=False
[2026-01-11 08:04:23] 2026-01-11 13:03:32,266 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 08:04:23] 2026-01-11 13:03:32,266 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 08:04:23] 2026-01-11 13:03:32,319 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 08:04:23] 2026-01-11 13:03:32,319 | INFO     | aborting loop
[2026-01-11 08:04:23] 2026-01-11 13:03:33,271 | INFO     | [job] retrieve thread has finished
[2026-01-11 08:04:23] 2026-01-11 13:03:33,288 | INFO     | all job control threads have been joined
[2026-01-11 08:04:23] 2026-01-11 13:03:33,324 | INFO     | [job] job monitor thread has finished
[2026-01-11 08:04:23] 2026-01-11 13:03:33,353 | INFO     | all data control threads have been joined
[2026-01-11 08:04:23] 2026-01-11 13:03:33,542 | INFO     | all payload control threads have been joined
[2026-01-11 08:04:23] 2026-01-11 13:03:33,586 | INFO     | [payload] validate_post thread has finished
[2026-01-11 08:04:23] 2026-01-11 13:03:33,692 | INFO     | [job] validate thread has finished
[2026-01-11 08:04:23] 2026-01-11 13:03:33,735 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 08:04:23] 2026-01-11 13:03:33,869 | INFO     | [data] copytool_in thread has finished
[2026-01-11 08:04:23] 2026-01-11 13:03:33,995 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 08:04:23] 2026-01-11 13:03:34,273 | INFO     | [data] copytool_out thread has finished
[2026-01-11 08:04:23] 2026-01-11 13:03:34,294 | INFO     | [job] control thread has finished
[2026-01-11 08:04:23] 2026-01-11 13:03:34,302 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 08:04:23] 2026-01-11 13:03:34,359 | INFO     | [data] control thread has finished
[2026-01-11 08:04:23] 2026-01-11 13:03:34,502 | INFO     | [payload] failed_post thread has finished
[2026-01-11 08:04:23] 2026-01-11 13:03:34,527 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 08:04:23] 2026-01-11 13:03:34,548 | INFO     | [payload] control thread has finished
[2026-01-11 08:04:23] 2026-01-11 13:03:34,646 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 08:04:23] 2026-01-11 13:03:35,308 | INFO     | [job] queue monitor thread has finished
[2026-01-11 08:04:23] 2026-01-11 13:03:38,003 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 08:04:23] 2026-01-11 13:03:42,922 | INFO     | job.realtimelogging is not enabled
[2026-01-11 08:04:23] 2026-01-11 13:03:43,928 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 08:04:23] 2026-01-11 13:03:51,078 | INFO     | [monitor] cgroup control has ended
[2026-01-11 08:04:23] 2026-01-11 13:03:52,378 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140181515687744)>', '<ExcThread(monitor, started 140181235533568)>']
[2026-01-11 08:04:23] 2026-01-11 13:03:57,404 | INFO     | all workflow threads have been joined
[2026-01-11 08:04:23] 2026-01-11 13:03:57,404 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 08:04:23] 2026-01-11 13:03:57,404 | INFO     | traces error code: 0
[2026-01-11 08:04:23] 2026-01-11 13:03:57,404 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 08:04:23] 2026-01-11 13:04:01,655 | INFO     | PID=259865 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 08:04:23] 2026-01-11 13:04:01,659 | INFO     | .. there are 77 such processes running
[2026-01-11 08:04:23] 2026-01-11 13:04:01,659 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 08:04:23] 2026-01-11 13:04:01,659 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 08:04:23] 2026-01-11 13:04:01,659 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 08:04:23] 2026-01-11 13:04:01,660 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 08:04:23] 2026-01-11 13:04:01,660 | INFO     | [monitor] control thread has ended
[2026-01-11 08:04:23] 2026-01-11 13:04:01,841 [wrapper] ==== pilot stdout END ====
[2026-01-11 08:04:23] 2026-01-11 13:04:01,846 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 08:04:23] 2026-01-11 13:04:01,849 [wrapper] pilotpid: 259865
[2026-01-11 08:04:23] 2026-01-11 13:04:01,851 [wrapper] Pilot exit status: 0
[2026-01-11 08:04:23] 2026-01-11 13:04:01,864 [wrapper] pandaids: 6962918531
[2026-01-11 08:04:23] 2026-01-11 13:04:02,000 [wrapper] cleanup supervisor_pilot 1944687 259866
[2026-01-11 08:04:23] 2026-01-11 13:04:02,003 [wrapper] Test setup, not cleaning
[2026-01-11 08:04:23] 2026-01-11 13:04:02,006 [wrapper] apfmon messages muted
[2026-01-11 08:04:23] 2026-01-11 13:04:02,014 [wrapper] ==== wrapper stdout END ====
[2026-01-11 08:04:23] 2026-01-11 13:04:02,028 [wrapper] ==== wrapper stderr END ====
[2026-01-11 08:04:23]  *** Error codes and diagnostics ***
[2026-01-11 08:04:23]     "exeErrorCode": 0,
[2026-01-11 08:04:23]     "exeErrorDiag": "",
[2026-01-11 08:04:23]     "pilotErrorCode": 0,
[2026-01-11 08:04:23]     "pilotErrorDiag": "",
[2026-01-11 08:04:23]  *** Listing of results directory ***
[2026-01-11 08:04:23] total 453332
[2026-01-11 08:04:23] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-11 08:04:23] -rwx------. 1 boincer umatlas     36322 Jan  8 03:04 runpilot2-wrapper.sh
[2026-01-11 08:04:23] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:07 queuedata.json
[2026-01-11 08:04:23] -rw-r--r--. 1 boincer umatlas       100 Jan 11 02:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 08:04:23] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 02:04 run_atlas
[2026-01-11 08:04:23] -rw-r--r--. 1 boincer umatlas       105 Jan 11 02:04 job.xml
[2026-01-11 08:04:23] -rw-r--r--. 2 boincer umatlas 225254843 Jan 11 02:04 EVNT.47898824._000799.pool.root.1
[2026-01-11 08:04:23] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 02:04 start_atlas.sh
[2026-01-11 08:04:23] drwxrwx--x. 2 boincer umatlas        68 Jan 11 02:04 shared
[2026-01-11 08:04:23] -rw-r--r--. 2 boincer umatlas    592401 Jan 11 02:04 input.tar.gz
[2026-01-11 08:04:23] -rw-r--r--. 1 boincer umatlas         0 Jan 11 02:04 boinc_lockfile
[2026-01-11 08:04:23] -rw-r--r--. 1 boincer umatlas      2519 Jan 11 02:04 pandaJob.out
[2026-01-11 08:04:23] -rw-------. 1 boincer umatlas    989548 Jan 11 02:05 agis_schedconf.cvmfs.json
[2026-01-11 08:04:23] drwx------. 5 boincer umatlas      4096 Jan 11 02:05 pilot3
[2026-01-11 08:04:23] -rw-r--r--. 1 boincer umatlas      6798 Jan 11 07:56 init_data.xml
[2026-01-11 08:04:23] -rw-------. 1 boincer umatlas 228751298 Jan 11 08:02 HITS.47898826._020579.pool.root.1
[2026-01-11 08:04:23] -rw-r--r--. 1 boincer umatlas       531 Jan 11 08:02 boinc_task_state.xml
[2026-01-11 08:04:23] -rw-------. 1 boincer umatlas        95 Jan 11 08:03 pilot_heartbeat.json
[2026-01-11 08:04:23] -rw-------. 1 boincer umatlas      1054 Jan 11 08:03 memory_monitor_summary.json
[2026-01-11 08:04:23] -rw-------. 1 boincer umatlas   1516240 Jan 11 08:03 agis_ddmendpoints.agis.ALL.json
[2026-01-11 08:04:23] -rw-------. 1 boincer umatlas    546199 Jan 11 08:03 log.47898826._020579.job.log.tgz.1
[2026-01-11 08:04:23] -rw-------. 1 boincer umatlas      7825 Jan 11 08:03 heartbeat.json
[2026-01-11 08:04:23] -rw-------. 1 boincer umatlas       822 Jan 11 08:04 pilotlog.txt
[2026-01-11 08:04:23] -rw-------. 1 boincer umatlas   2605801 Jan 11 08:04 log.47898826._020579.job.log.1
[2026-01-11 08:04:23] -rw-------. 1 boincer umatlas       357 Jan 11 08:04 output.list
[2026-01-11 08:04:23] -rw-r--r--. 1 boincer umatlas       620 Jan 11 08:04 runtime_log
[2026-01-11 08:04:23] -rw-------. 1 boincer umatlas   3174400 Jan 11 08:04 result.tar.gz
[2026-01-11 08:04:23] -rw-------. 1 boincer umatlas       658 Jan 11 08:04 XIzLDmZB0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGYeKDm9nQg4m.diag
[2026-01-11 08:04:23] -rw-r--r--. 1 boincer umatlas      8813 Jan 11 08:04 runtime_log.err
[2026-01-11 08:04:23] -rw-r--r--. 1 boincer umatlas        28 Jan 11 08:04 wrapper_checkpoint.txt
[2026-01-11 08:04:23] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 08:04 boinc_mmap_file
[2026-01-11 08:04:23] -rw-r--r--. 1 boincer umatlas     21418 Jan 11 08:04 stderr.txt
[2026-01-11 08:04:23] HITS file was successfully produced:
[2026-01-11 08:04:23] -rw-------. 1 boincer umatlas 228751298 Jan 11 08:02 shared/HITS.pool.root.1
[2026-01-11 08:04:23]  *** Contents of shared directory: ***
[2026-01-11 08:04:23] total 447064
[2026-01-11 08:04:23] -rw-r--r--. 2 boincer umatlas 225254843 Jan 11 02:04 ATLAS.root_0
[2026-01-11 08:04:23] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 02:04 start_atlas.sh
[2026-01-11 08:04:23] -rw-r--r--. 2 boincer umatlas    592401 Jan 11 02:04 input.tar.gz
[2026-01-11 08:04:23] -rw-------. 1 boincer umatlas 228751298 Jan 11 08:02 HITS.pool.root.1
[2026-01-11 08:04:23] -rw-------. 1 boincer umatlas   3174400 Jan 11 08:04 result.tar.gz
08:04:24 (249546): run_atlas exited; CPU time 64717.748169
08:04:24 (249546): called boinc_finish(0)

</stderr_txt>
]]>

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