Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:10:20 (298710): wrapper (7.7.26015): starting
01:10:20 (298710): wrapper: running run_atlas (--nthreads 10)
[2026-01-11 01:10:20] Arguments: --nthreads 10
[2026-01-11 01:10:20] Threads: 10
[2026-01-11 01:10:20] Checking for CVMFS
[2026-01-11 01:10:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 01:10:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 01:10:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 01:10:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 01:10:20] 2.13.3.0 1684472 19374 232988 155006 1 83 34806830 40960001 11203 16776704 0 22739060 99.651 18522311 41587 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-11 01:10:20] CVMFS is ok
[2026-01-11 01:10:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 01:10:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 01:10:20] Further information can be found at the LHC@home message board.
[2026-01-11 01:10:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 01:10:20] Checking for apptainer binary...
[2026-01-11 01:10:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 01:10:20] Running /usr/bin/apptainer --version
[2026-01-11 01:10:20] apptainer version 1.4.5-2.el9
[2026-01-11 01:10:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 01:10:20] c-206-36.aglt2.org
[2026-01-11 01:10:20] apptainer works
[2026-01-11 01:10:20] Set ATHENA_PROC_NUMBER=10
[2026-01-11 01:10:20] Set ATHENA_CORE_NUMBER=10
[2026-01-11 01:10:20] Starting ATLAS job with PandaID=6966030259
[2026-01-11 01:10:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 02:42:01]  *** The last 200 lines of the pilot log: ***
[2026-01-11 02:42:01]  protocol_id=None
[2026-01-11 02:42:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-11 02:42:01]  replicas=None
[2026-01-11 02:42:01]  scope=mc23_13p6TeV
[2026-01-11 02:42:01]  status=None
[2026-01-11 02:42:01]  status_code=0
[2026-01-11 02:42:01]  storage_token=
[2026-01-11 02:42:01]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6966030259/log.47898826._040773.job.log.tgz.1
[2026-01-11 02:42:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/31/log.47898826._040773.job.log.tgz.1
[2026-01-11 02:42:01]  workdir=None
[2026-01-11 02:42:01] ]
[2026-01-11 02:42:01] 2026-01-11 07:41:22,624 | INFO     | transferring file log.47898826._040773.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6966030259/log.47898826._040773.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-11 02:42:01] 2026-01-11 07:41:22,624 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6966030259/log.47898826._040773.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._040773.job
[2026-01-11 02:42:01] 2026-01-11 07:41:22,642 | INFO     | adding to output.list: log.47898826._040773.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/31/log.47898826._040773.job.log.tg
[2026-01-11 02:42:01] 2026-01-11 07:41:22,643 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 02:42:01] 2026-01-11 07:41:22,643 | INFO     | summary of transferred files:
[2026-01-11 02:42:01] 2026-01-11 07:41:22,643 | INFO     |  -- lfn=log.47898826._040773.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 02:42:01] 2026-01-11 07:41:22,643 | INFO     | stage-out finished correctly
[2026-01-11 02:42:01] 2026-01-11 07:41:23,218 | INFO     | monitor loop #403: job 0:6966030259 is in state 'finished'
[2026-01-11 02:42:01] 2026-01-11 07:41:23,218 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 02:42:01] 2026-01-11 07:41:23,754 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 02:42:01] 2026-01-11 07:41:23,839 | INFO     | job 6966030259 has state=finished
[2026-01-11 02:42:01] 2026-01-11 07:41:23,839 | INFO     | preparing for final server update for job 6966030259 in state='finished'
[2026-01-11 02:42:01] 2026-01-11 07:41:23,839 | INFO     | this job has now completed (state=finished)
[2026-01-11 02:42:01] 2026-01-11 07:41:23,839 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 02:42:01] 2026-01-11 07:41:23,840 | INFO     | log transfer has been attempted: DONE
[2026-01-11 02:42:01] 2026-01-11 07:41:23,840 | INFO     | job 6966030259 has finished - writing final server update
[2026-01-11 02:42:01] 2026-01-11 07:41:23,840 | INFO     | total number of processed events: 400 (read)
[2026-01-11 02:42:01] 2026-01-11 07:41:23,840 | INFO     | executing command: lscpu
[2026-01-11 02:42:01] 2026-01-11 07:41:23,892 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 02:42:01] 2026-01-11 07:41:24,306 | INFO     | time since job start (5453s) is within the limit (349056.0s)
[2026-01-11 02:42:01] 2026-01-11 07:41:25,722 | INFO     | monitor loop #404: job 0:6966030259 is in state 'finished'
[2026-01-11 02:42:01] 2026-01-11 07:41:25,722 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 02:42:01] 2026-01-11 07:41:26,311 | INFO     | time since job start (5455s) is within the limit (349056.0s)
[2026-01-11 02:42:01] 2026-01-11 07:41:27,823 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 02:42:01] 2026-01-11 07:41:27,827 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3255.7212187500004
[2026-01-11 02:42:01] 2026-01-11 07:41:27,837 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6966030259/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 02:42:01] 2026-01-11 07:41:27,837 | INFO     | extracted standard info from prmon json
[2026-01-11 02:42:01] 2026-01-11 07:41:27,837 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 02:42:01] 2026-01-11 07:41:27,837 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 02:42:01] 2026-01-11 07:41:27,838 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 02:42:01] 2026-01-11 07:41:27,838 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 02:42:01] 2026-01-11 07:41:27,840 | INFO     | fitting pss+swap vs Time
[2026-01-11 02:42:01] 2026-01-11 07:41:27,840 | INFO     | sum of square deviations: 170962176.0609755
[2026-01-11 02:42:01] 2026-01-11 07:41:27,840 | INFO     | sum of deviations: 1140634065.195122
[2026-01-11 02:42:01] 2026-01-11 07:41:27,840 | INFO     | mean x: 1768114633.5731707
[2026-01-11 02:42:01] 2026-01-11 07:41:27,840 | INFO     | mean y: 2646640.6341463416
[2026-01-11 02:42:01] 2026-01-11 07:41:27,840 | INFO     | intersect: -11793949710.03611
[2026-01-11 02:42:01] 2026-01-11 07:41:27,841 | INFO     | chi2: 0.003901337504615995
[2026-01-11 02:42:01] 2026-01-11 07:41:27,841 | INFO     | current memory leak: 6.67 B/s (using 82 data points, chi2=0.00)
[2026-01-11 02:42:01] 2026-01-11 07:41:27,841 | INFO     | could have reported an average CPU frequency of 3261 MHz (7 samples)
[2026-01-11 02:42:01] 2026-01-11 07:41:27,841 | INFO     | ..............................
[2026-01-11 02:42:01] 2026-01-11 07:41:27,841 | INFO     | . Timing measurements:
[2026-01-11 02:42:01] 2026-01-11 07:41:27,841 | INFO     | . get job = 0 s
[2026-01-11 02:42:01] 2026-01-11 07:41:27,841 | INFO     | . initial setup = 2 s
[2026-01-11 02:42:01] 2026-01-11 07:41:27,841 | INFO     | . payload setup = 5 s
[2026-01-11 02:42:01] 2026-01-11 07:41:27,841 | INFO     | . stage-in = 0 s
[2026-01-11 02:42:01] 2026-01-11 07:41:27,842 | INFO     | . payload execution = 5424 s
[2026-01-11 02:42:01] 2026-01-11 07:41:27,842 | INFO     | . stage-out = 0 s
[2026-01-11 02:42:01] 2026-01-11 07:41:27,842 | INFO     | . log creation = 0 s
[2026-01-11 02:42:01] 2026-01-11 07:41:27,842 | INFO     | ..............................
[2026-01-11 02:42:01] 2026-01-11 07:41:28,317 | INFO     | time since job start (5457s) is within the limit (349056.0s)
[2026-01-11 02:42:01] 2026-01-11 07:41:28,416 | INFO     | 
[2026-01-11 02:42:01] 2026-01-11 07:41:28,418 | INFO     | job summary report
[2026-01-11 02:42:01] 2026-01-11 07:41:28,418 | INFO     | --------------------------------------------------
[2026-01-11 02:42:01] 2026-01-11 07:41:28,418 | INFO     | PanDA job id: 6966030259
[2026-01-11 02:42:01] 2026-01-11 07:41:28,418 | INFO     | task id: 47898826
[2026-01-11 02:42:01] 2026-01-11 07:41:28,418 | INFO     | errors: (none)
[2026-01-11 02:42:01] 2026-01-11 07:41:28,418 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 02:42:01] 2026-01-11 07:41:28,418 | INFO     | pilot state: finished 
[2026-01-11 02:42:01] 2026-01-11 07:41:28,418 | INFO     | transexitcode: 0
[2026-01-11 02:42:01] 2026-01-11 07:41:28,419 | INFO     | exeerrorcode: 0
[2026-01-11 02:42:01] 2026-01-11 07:41:28,419 | INFO     | exeerrordiag: 
[2026-01-11 02:42:01] 2026-01-11 07:41:28,419 | INFO     | exitcode: 0
[2026-01-11 02:42:01] 2026-01-11 07:41:28,419 | INFO     | exitmsg: OK
[2026-01-11 02:42:01] 2026-01-11 07:41:28,419 | INFO     | cpuconsumptiontime: 44693 s
[2026-01-11 02:42:01] 2026-01-11 07:41:28,419 | INFO     | nevents: 400
[2026-01-11 02:42:01] 2026-01-11 07:41:28,419 | INFO     | neventsw: 0
[2026-01-11 02:42:01] 2026-01-11 07:41:28,419 | INFO     | pid: 309008
[2026-01-11 02:42:01] 2026-01-11 07:41:28,419 | INFO     | pgrp: 309008
[2026-01-11 02:42:01] 2026-01-11 07:41:28,419 | INFO     | corecount: 10
[2026-01-11 02:42:01] 2026-01-11 07:41:28,419 | INFO     | event service: False
[2026-01-11 02:42:01] 2026-01-11 07:41:28,419 | INFO     | sizes: {0: 2283745, 1: 2283944, 5: 2284206, 11: 2284262, 5434: 2310817, 5435: 2310816, 5436: 2319998, 5437: 2320054, 5441: 2320248}
[2026-01-11 02:42:01] 2026-01-11 07:41:28,419 | INFO     | --------------------------------------------------
[2026-01-11 02:42:01] 2026-01-11 07:41:28,419 | INFO     | 
[2026-01-11 02:42:01] 2026-01-11 07:41:28,419 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 02:42:01] 2026-01-11 07:41:28,445 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 02:42:01] 2026-01-11 07:41:28,445 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 02:42:01] 2026-01-11 07:41:28,445 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 02:42:01] 2026-01-11 07:41:28,445 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 02:42:01] 2026-01-11 07:41:28,445 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 02:42:01] 2026-01-11 07:41:28,445 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 02:42:01] 2026-01-11 07:41:28,446 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 02:42:01] 2026-01-11 07:41:28,446 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 02:42:01] 2026-01-11 07:41:28,446 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 02:42:01] 2026-01-11 07:41:28,446 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 02:42:01] 2026-01-11 07:41:28,446 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 02:42:01] 2026-01-11 07:41:28,446 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 02:42:01] 2026-01-11 07:41:28,446 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 02:42:01] 2026-01-11 07:41:28,446 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 02:42:01] 2026-01-11 07:41:28,446 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 02:42:01] 2026-01-11 07:41:28,446 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 02:42:01] 2026-01-11 07:41:28,446 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 02:42:01] 2026-01-11 07:41:28,446 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 02:42:01] 2026-01-11 07:41:28,446 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 02:42:01] 2026-01-11 07:41:28,446 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 02:42:01] 2026-01-11 07:41:28,446 | INFO     | job 6966030259 has completed (purged errors)
[2026-01-11 02:42:01] 2026-01-11 07:41:28,447 | INFO     | overall cleanup function is called
[2026-01-11 02:42:01] 2026-01-11 07:41:29,455 | INFO     | --- collectZombieJob: --- 10, [309008]
[2026-01-11 02:42:01] 2026-01-11 07:41:29,455 | INFO     | zombie collector waiting for pid 309008
[2026-01-11 02:42:01] 2026-01-11 07:41:29,455 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 02:42:01] 2026-01-11 07:41:29,455 | INFO     | collected zombie processes
[2026-01-11 02:42:01] 2026-01-11 07:41:29,455 | INFO     | will attempt to kill all subprocesses of pid=309008
[2026-01-11 02:42:01] 2026-01-11 07:41:29,679 | INFO     | process IDs to be killed: [309008] (in reverse order)
[2026-01-11 02:42:01] 2026-01-11 07:41:29,774 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 02:42:01] 2026-01-11 07:41:29,774 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 02:42:01] 2026-01-11 07:41:29,785 | INFO     | did not find any defunct processes belonging to 309008
[2026-01-11 02:42:01] 2026-01-11 07:41:29,792 | INFO     | did not find any defunct processes belonging to 309008
[2026-01-11 02:42:01] 2026-01-11 07:41:29,792 | INFO     | ready for new job
[2026-01-11 02:42:01] 2026-01-11 07:41:29,792 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 02:42:01] 2026-01-11 07:41:29,794 | INFO     | ***************************************
[2026-01-11 02:42:01] 2026-01-11 07:41:29,794 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 02:42:01] 2026-01-11 07:41:29,794 | INFO     | ***************************************
[2026-01-11 02:42:01] 2026-01-11 07:41:29,794 | INFO     | 
[2026-01-11 02:42:01] 2026-01-11 07:41:29,798 | INFO     | architecture information:
[2026-01-11 02:42:01] 2026-01-11 07:41:29,798 | INFO     | executing command: cat /etc/os-release
[2026-01-11 02:42:01] 2026-01-11 07:41:29,817 | INFO     | cat /etc/os-release:
[2026-01-11 02:42:01] NAME="CentOS Linux"
[2026-01-11 02:42:01] VERSION="7 (Core)"
[2026-01-11 02:42:01] ID="centos"
[2026-01-11 02:42:01] ID_LIKE="rhel fedora"
[2026-01-11 02:42:01] VERSION_ID="7"
[2026-01-11 02:42:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 02:42:01] ANSI_COLOR="0;31"
[2026-01-11 02:42:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 02:42:01] HOME_URL="https://www.centos.org/"
[2026-01-11 02:42:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 02:42:01] 
[2026-01-11 02:42:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 02:42:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 02:42:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 02:42:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 02:42:01] 
[2026-01-11 02:42:01] 2026-01-11 07:41:29,817 | INFO     | ***************************************
[2026-01-11 02:42:01] 2026-01-11 07:41:30,320 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 02:42:01] 2026-01-11 07:41:30,339 | INFO     | sufficient remaining disk space (86411051008 B)
[2026-01-11 02:42:01] 2026-01-11 07:41:30,340 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 02:42:01] 2026-01-11 07:41:30,340 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 02:42:01] 2026-01-11 07:41:30,340 | INFO     | update_server=False
[2026-01-11 02:42:01] 2026-01-11 07:41:30,340 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 02:42:01] 2026-01-11 07:41:30,340 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 02:42:01] 2026-01-11 07:41:30,416 | INFO     | all job control threads have been joined
[2026-01-11 02:42:01] 2026-01-11 07:41:30,726 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 02:42:01] 2026-01-11 07:41:30,727 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 02:42:01] 2026-01-11 07:41:30,727 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 02:42:01] 2026-01-11 07:41:30,727 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 02:42:01] 2026-01-11 07:41:30,728 | INFO     | will abort loop
[2026-01-11 02:42:01] 2026-01-11 07:41:30,848 | INFO     | all payload control threads have been joined
[2026-01-11 02:42:01] 2026-01-11 07:41:31,017 | INFO     | all data control threads have been joined
[2026-01-11 02:42:01] 2026-01-11 07:41:31,341 | INFO     | [job] retrieve thread has finished
[2026-01-11 02:42:01] 2026-01-11 07:41:31,417 | INFO     | [job] control thread has finished
[2026-01-11 02:42:01] 2026-01-11 07:41:31,703 | INFO     | [data] copytool_in thread has finished
[2026-01-11 02:42:01] 2026-01-11 07:41:31,723 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 02:42:01] 2026-01-11 07:41:31,728 | INFO     | [job] job monitor thread has finished
[2026-01-11 02:42:01] 2026-01-11 07:41:31,757 | INFO     | [payload] validate_post thread has finished
[2026-01-11 02:42:01] 2026-01-11 07:41:31,853 | INFO     | [payload] control thread has finished
[2026-01-11 02:42:01] 2026-01-11 07:41:32,023 | INFO     | [data] control thread has finished
[2026-01-11 02:42:01] 2026-01-11 07:41:32,023 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 02:42:01] 2026-01-11 07:41:32,255 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 02:42:01] 2026-01-11 07:41:32,604 | INFO     | [job] validate thread has finished
[2026-01-11 02:42:01] 2026-01-11 07:41:32,658 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 02:42:01] 2026-01-11 07:41:32,732 | INFO     | [data] copytool_out thread has finished
[2026-01-11 02:42:01] 2026-01-11 07:41:32,933 | INFO     | [payload] failed_post thread has finished
[2026-01-11 02:42:01] 2026-01-11 07:41:32,934 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 02:42:01] 2026-01-11 07:41:33,935 | INFO     | [job] queue monitor thread has finished
[2026-01-11 02:42:01] 2026-01-11 07:41:34,344 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 02:42:01] 2026-01-11 07:41:40,408 | INFO     | [monitor] cgroup control has ended
[2026-01-11 02:42:01] 2026-01-11 07:41:41,564 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139648202630976)>', '<ExcThread(monitor, started 139647841728256)>']
[2026-01-11 02:42:01] 2026-01-11 07:41:46,587 | INFO     | all workflow threads have been joined
[2026-01-11 02:42:01] 2026-01-11 07:41:46,587 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 02:42:01] 2026-01-11 07:41:46,588 | INFO     | traces error code: 0
[2026-01-11 02:42:01] 2026-01-11 07:41:46,588 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 02:42:01] 2026-01-11 07:42:01,660 | INFO     | PID=302380 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 02:42:01] 2026-01-11 07:42:01,660 | INFO     | .. there are 9 such processes running
[2026-01-11 02:42:01] 2026-01-11 07:42:01,661 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 02:42:01] 2026-01-11 07:42:01,661 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 02:42:01] 2026-01-11 07:42:01,661 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 02:42:01] 2026-01-11 07:42:01,661 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 02:42:01] 2026-01-11 07:42:01,661 | CRITICAL | thread 'MainThread' is not alive
[2026-01-11 02:42:01] 2026-01-11 07:42:01,661 | INFO     | [monitor] control thread has ended
[2026-01-11 02:42:01] 2026-01-11 07:42:01,776 [wrapper] ==== pilot stdout END ====
[2026-01-11 02:42:01] 2026-01-11 07:42:01,780 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 02:42:01] 2026-01-11 07:42:01,782 [wrapper] pilotpid: 302380
[2026-01-11 02:42:01] 2026-01-11 07:42:01,785 [wrapper] Pilot exit status: 0
[2026-01-11 02:42:01] 2026-01-11 07:42:01,797 [wrapper] pandaids: 6966030259
[2026-01-11 02:42:01] 2026-01-11 07:42:01,859 [wrapper] cleanup supervisor_pilot  487740 302381
[2026-01-11 02:42:01] 2026-01-11 07:42:01,862 [wrapper] Test setup, not cleaning
[2026-01-11 02:42:01] 2026-01-11 07:42:01,865 [wrapper] apfmon messages muted
[2026-01-11 02:42:01] 2026-01-11 07:42:01,867 [wrapper] ==== wrapper stdout END ====
[2026-01-11 02:42:01] 2026-01-11 07:42:01,870 [wrapper] ==== wrapper stderr END ====
[2026-01-11 02:42:01]  *** Error codes and diagnostics ***
[2026-01-11 02:42:01]     "exeErrorCode": 0,
[2026-01-11 02:42:01]     "exeErrorDiag": "",
[2026-01-11 02:42:01]     "pilotErrorCode": 0,
[2026-01-11 02:42:01]     "pilotErrorDiag": "",
[2026-01-11 02:42:01]  *** Listing of results directory ***
[2026-01-11 02:42:01] total 438876
[2026-01-11 02:42:01] -rw-r--r--. 1 boincer umatlas    579449 Jan 11 00:17 pilot3.tar.gz
[2026-01-11 02:42:01] -rw-r--r--. 1 boincer umatlas      5112 Jan 11 01:07 queuedata.json
[2026-01-11 02:42:01] -rwx------. 1 boincer umatlas     36322 Jan 11 01:09 runpilot2-wrapper.sh
[2026-01-11 02:42:01] -rw-r--r--. 1 boincer umatlas       100 Jan 11 01:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 02:42:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 01:10 run_atlas
[2026-01-11 02:42:01] -rw-r--r--. 1 boincer umatlas       105 Jan 11 01:10 job.xml
[2026-01-11 02:42:01] -rw-r--r--. 2 boincer umatlas 224410031 Jan 11 01:10 EVNT.47898824._000444.pool.root.1
[2026-01-11 02:42:01] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 01:10 start_atlas.sh
[2026-01-11 02:42:01] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 01:10 shared
[2026-01-11 02:42:01] -rw-r--r--. 2 boincer umatlas    592399 Jan 11 01:10 input.tar.gz
[2026-01-11 02:42:01] -rw-r--r--. 1 boincer umatlas         0 Jan 11 01:10 boinc_lockfile
[2026-01-11 02:42:01] -rw-r--r--. 1 boincer umatlas      2516 Jan 11 01:10 pandaJob.out
[2026-01-11 02:42:01] -rw-------. 1 boincer umatlas        57 Jan 11 01:10 setup.sh.local
[2026-01-11 02:42:01] -rw-------. 1 boincer umatlas    989548 Jan 11 01:10 agis_schedconf.cvmfs.json
[2026-01-11 02:42:01] -rw-------. 1 boincer umatlas   1516240 Jan 11 01:10 agis_ddmendpoints.agis.ALL.json
[2026-01-11 02:42:01] drwx------. 5 boincer umatlas      4096 Jan 11 01:10 pilot3
[2026-01-11 02:42:01] -rw-r--r--. 1 boincer umatlas      6904 Jan 11 02:40 init_data.xml
[2026-01-11 02:42:01] -rw-------. 1 boincer umatlas 218730481 Jan 11 02:40 HITS.47898826._040773.pool.root.1
[2026-01-11 02:42:01] -rw-r--r--. 1 boincer umatlas       529 Jan 11 02:40 boinc_task_state.xml
[2026-01-11 02:42:01] -rw-------. 1 boincer umatlas        95 Jan 11 02:41 pilot_heartbeat.json
[2026-01-11 02:42:01] -rw-------. 1 boincer umatlas      1034 Jan 11 02:41 memory_monitor_summary.json
[2026-01-11 02:42:01] -rw-------. 1 boincer umatlas    384874 Jan 11 02:41 log.47898826._040773.job.log.tgz.1
[2026-01-11 02:42:01] -rw-------. 1 boincer umatlas      7773 Jan 11 02:41 heartbeat.json
[2026-01-11 02:42:01] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 02:41 boinc_mmap_file
[2026-01-11 02:42:01] -rw-r--r--. 1 boincer umatlas        27 Jan 11 02:41 wrapper_checkpoint.txt
[2026-01-11 02:42:01] -rw-------. 1 boincer umatlas       891 Jan 11 02:42 pilotlog.txt
[2026-01-11 02:42:01] -rw-------. 1 boincer umatlas    796971 Jan 11 02:42 log.47898826._040773.job.log.1
[2026-01-11 02:42:01] -rw-------. 1 boincer umatlas       357 Jan 11 02:42 output.list
[2026-01-11 02:42:01] -rw-r--r--. 1 boincer umatlas       620 Jan 11 02:42 runtime_log
[2026-01-11 02:42:01] -rw-------. 1 boincer umatlas   1198080 Jan 11 02:42 result.tar.gz
[2026-01-11 02:42:01] -rw-r--r--. 1 boincer umatlas      9344 Jan 11 02:42 runtime_log.err
[2026-01-11 02:42:01] -rw-------. 1 boincer umatlas       653 Jan 11 02:42 oK3LDmIp3y8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmq0mKDmpXSegn.diag
[2026-01-11 02:42:01] -rw-r--r--. 1 boincer umatlas     21840 Jan 11 02:42 stderr.txt
[2026-01-11 02:42:01] HITS file was successfully produced:
[2026-01-11 02:42:01] -rw-------. 1 boincer umatlas 218730481 Jan 11 02:40 shared/HITS.pool.root.1
[2026-01-11 02:42:01]  *** Contents of shared directory: ***
[2026-01-11 02:42:01] total 434528
[2026-01-11 02:42:01] -rw-r--r--. 2 boincer umatlas 224410031 Jan 11 01:10 ATLAS.root_0
[2026-01-11 02:42:01] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 01:10 start_atlas.sh
[2026-01-11 02:42:01] -rw-r--r--. 2 boincer umatlas    592399 Jan 11 01:10 input.tar.gz
[2026-01-11 02:42:01] -rw-------. 1 boincer umatlas 218730481 Jan 11 02:40 HITS.pool.root.1
[2026-01-11 02:42:01] -rw-------. 1 boincer umatlas   1198080 Jan 11 02:42 result.tar.gz
02:42:03 (298710): run_atlas exited; CPU time 44713.363997
02:42:03 (298710): called boinc_finish(0)

</stderr_txt>
]]>

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