Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:17 (4008868): wrapper (7.7.26015): starting
00:02:17 (4008868): wrapper: running run_atlas (--nthreads 12)
[2026-01-11 00:02:17] Arguments: --nthreads 12
[2026-01-11 00:02:17] Threads: 12
[2026-01-11 00:02:17] Checking for CVMFS
[2026-01-11 00:02:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 00:02:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 00:02:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 00:02:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 00:02:18] 2.13.3.0 7554 25312 236120 155004 2 789 31137484 40960000 19112 16776704 0 50247058 99.686 41457194 40180 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-11 00:02:18] CVMFS is ok
[2026-01-11 00:02:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 00:02:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 00:02:18] Further information can be found at the LHC@home message board.
[2026-01-11 00:02:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 00:02:18] Checking for apptainer binary...
[2026-01-11 00:02:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 00:02:18] Running /usr/bin/apptainer --version
[2026-01-11 00:02:18] apptainer version 1.4.5-2.el9
[2026-01-11 00:02:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 00:02:18] c-212-7.aglt2.org
[2026-01-11 00:02:18] apptainer works
[2026-01-11 00:02:18] Set ATHENA_PROC_NUMBER=12
[2026-01-11 00:02:18] Set ATHENA_CORE_NUMBER=12
[2026-01-11 00:02:18] Starting ATLAS job with PandaID=6962016985
[2026-01-11 00:02:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 01:58:50]  *** The last 200 lines of the pilot log: ***
[2026-01-11 01:58:50] 2026-01-11 06:57:50,729 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 01:58:50] 2026-01-11 06:57:50,732 | INFO     | fitting pss+swap vs Time
[2026-01-11 01:58:50] 2026-01-11 06:57:50,732 | INFO     | sum of square deviations: 447383272.0
[2026-01-11 01:58:50] 2026-01-11 06:57:50,733 | INFO     | sum of deviations: 13635602609.0
[2026-01-11 01:58:50] 2026-01-11 06:57:50,733 | INFO     | mean x: 1768111194.0
[2026-01-11 01:58:50] 2026-01-11 06:57:50,733 | INFO     | mean y: 2700612.371681416
[2026-01-11 01:58:50] 2026-01-11 06:57:50,733 | INFO     | intersect: -53886801116.491585
[2026-01-11 01:58:50] 2026-01-11 06:57:50,733 | INFO     | chi2: 1.1277054141334226
[2026-01-11 01:58:50] 2026-01-11 06:57:50,733 | INFO     | sum of square deviations: 390582207.0
[2026-01-11 01:58:50] 2026-01-11 06:57:50,734 | INFO     | sum of deviations: 12862796384.5
[2026-01-11 01:58:50] 2026-01-11 06:57:50,734 | INFO     | mean x: 1768111041.5
[2026-01-11 01:58:50] 2026-01-11 06:57:50,734 | INFO     | mean y: 2698536.175925926
[2026-01-11 01:58:50] 2026-01-11 06:57:50,734 | INFO     | intersect: -58225382273.45689
[2026-01-11 01:58:50] 2026-01-11 06:57:50,734 | INFO     | chi2: 1.1294623305604075
[2026-01-11 01:58:50] 2026-01-11 06:57:50,734 | INFO     | current chi2=1.1294623305604075 (change=-0.15579568963361975 %)
[2026-01-11 01:58:50] 2026-01-11 06:57:50,734 | INFO     | right removable region: 107
[2026-01-11 01:58:50] 2026-01-11 06:57:50,735 | INFO     | sum of square deviations: 390582207.0
[2026-01-11 01:58:50] 2026-01-11 06:57:50,735 | INFO     | sum of deviations: 375874100.5000001
[2026-01-11 01:58:50] 2026-01-11 06:57:50,735 | INFO     | mean x: 1768111346.5
[2026-01-11 01:58:50] 2026-01-11 06:57:50,735 | INFO     | mean y: 2735311.3055555555
[2026-01-11 01:58:50] 2026-01-11 06:57:50,735 | INFO     | intersect: -1698794482.0102253
[2026-01-11 01:58:50] 2026-01-11 06:57:50,736 | INFO     | chi2: 0.028078002351443296
[2026-01-11 01:58:50] 2026-01-11 06:57:50,736 | INFO     | current chi2=0.028078002351443296 (change=97.51016515487605 %)
[2026-01-11 01:58:50] 2026-01-11 06:57:50,736 | INFO     | sum of square deviations: 338804492.0
[2026-01-11 01:58:50] 2026-01-11 06:57:50,736 | INFO     | sum of deviations: 1746238704.0000007
[2026-01-11 01:58:50] 2026-01-11 06:57:50,736 | INFO     | mean x: 1768111499.0
[2026-01-11 01:58:50] 2026-01-11 06:57:50,736 | INFO     | mean y: 2731463.4466019417
[2026-01-11 01:58:50] 2026-01-11 06:57:50,737 | INFO     | intersect: -9110325787.698872
[2026-01-11 01:58:50] 2026-01-11 06:57:50,737 | INFO     | chi2: 0.0005083189168300183
[2026-01-11 01:58:50] 2026-01-11 06:57:50,737 | INFO     | current chi2=0.0005083189168300183 (change=98.18961865424913 %)
[2026-01-11 01:58:50] 2026-01-11 06:57:50,737 | INFO     | sum of square deviations: 291817564.5
[2026-01-11 01:58:50] 2026-01-11 06:57:50,737 | INFO     | sum of deviations: 1406996567.5
[2026-01-11 01:58:50] 2026-01-11 06:57:50,738 | INFO     | mean x: 1768111651.5
[2026-01-11 01:58:50] 2026-01-11 06:57:50,738 | INFO     | mean y: 2732544.948979592
[2026-01-11 01:58:50] 2026-01-11 06:57:50,738 | INFO     | intersect: -8522206757.04172
[2026-01-11 01:58:50] 2026-01-11 06:57:50,738 | INFO     | chi2: 0.00034212411161769866
[2026-01-11 01:58:50] 2026-01-11 06:57:50,738 | INFO     | current chi2=0.00034212411161769866 (change=32.69498728254001 %)
[2026-01-11 01:58:50] 2026-01-11 06:57:50,738 | INFO     | sum of square deviations: 249388862.0
[2026-01-11 01:58:50] 2026-01-11 06:57:50,739 | INFO     | sum of deviations: 1094923526.0
[2026-01-11 01:58:50] 2026-01-11 06:57:50,739 | INFO     | mean x: 1768111804.0
[2026-01-11 01:58:50] 2026-01-11 06:57:50,739 | INFO     | mean y: 2733667.129032258
[2026-01-11 01:58:50] 2026-01-11 06:57:50,739 | INFO     | intersect: -7760031659.567478
[2026-01-11 01:58:50] 2026-01-11 06:57:50,739 | INFO     | chi2: 0.0002990666547954847
[2026-01-11 01:58:50] 2026-01-11 06:57:50,739 | INFO     | current chi2=0.0002990666547954847 (change=12.585332445182301 %)
[2026-01-11 01:58:50] 2026-01-11 06:57:50,739 | INFO     | left removable region: 40
[2026-01-11 01:58:50] 2026-01-11 06:57:50,739 | INFO     | sum of square deviations: 93240818.0
[2026-01-11 01:58:50] 2026-01-11 06:57:50,740 | INFO     | sum of deviations: 201398575.99999997
[2026-01-11 01:58:50] 2026-01-11 06:57:50,740 | INFO     | mean x: 1768112231.0
[2026-01-11 01:58:50] 2026-01-11 06:57:50,740 | INFO     | mean y: 2736684.074626866
[2026-01-11 01:58:50] 2026-01-11 06:57:50,740 | INFO     | intersect: -3816355567.256577
[2026-01-11 01:58:50] 2026-01-11 06:57:50,740 | INFO     | chi2: 0.00017917714737228629
[2026-01-11 01:58:50] 2026-01-11 06:57:50,740 | INFO     | current memory leak: 2.16 B/s (using 67 data points, chi2=0.00)
[2026-01-11 01:58:50] 2026-01-11 06:57:50,740 | INFO     | could have reported an average CPU frequency of 3216 MHz (7 samples)
[2026-01-11 01:58:50] 2026-01-11 06:57:50,741 | INFO     | ..............................
[2026-01-11 01:58:50] 2026-01-11 06:57:50,741 | INFO     | . Timing measurements:
[2026-01-11 01:58:50] 2026-01-11 06:57:50,741 | INFO     | . get job = 0 s
[2026-01-11 01:58:50] 2026-01-11 06:57:50,741 | INFO     | . initial setup = 2 s
[2026-01-11 01:58:50] 2026-01-11 06:57:50,741 | INFO     | . payload setup = 5 s
[2026-01-11 01:58:50] 2026-01-11 06:57:50,741 | INFO     | . stage-in = 0 s
[2026-01-11 01:58:50] 2026-01-11 06:57:50,741 | INFO     | . payload execution = 6880 s
[2026-01-11 01:58:50] 2026-01-11 06:57:50,741 | INFO     | . stage-out = 1 s
[2026-01-11 01:58:50] 2026-01-11 06:57:50,741 | INFO     | . log creation = 0 s
[2026-01-11 01:58:50] 2026-01-11 06:57:50,741 | INFO     | ..............................
[2026-01-11 01:58:50] 2026-01-11 06:57:50,835 | INFO     | 
[2026-01-11 01:58:50] 2026-01-11 06:57:50,835 | INFO     | job summary report
[2026-01-11 01:58:50] 2026-01-11 06:57:50,835 | INFO     | --------------------------------------------------
[2026-01-11 01:58:50] 2026-01-11 06:57:50,835 | INFO     | PanDA job id: 6962016985
[2026-01-11 01:58:50] 2026-01-11 06:57:50,836 | INFO     | task id: 47898826
[2026-01-11 01:58:50] 2026-01-11 06:57:50,836 | INFO     | errors: (none)
[2026-01-11 01:58:50] 2026-01-11 06:57:50,836 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 01:58:50] 2026-01-11 06:57:50,836 | INFO     | pilot state: finished 
[2026-01-11 01:58:50] 2026-01-11 06:57:50,836 | INFO     | transexitcode: 0
[2026-01-11 01:58:50] 2026-01-11 06:57:50,836 | INFO     | exeerrorcode: 0
[2026-01-11 01:58:50] 2026-01-11 06:57:50,836 | INFO     | exeerrordiag: 
[2026-01-11 01:58:50] 2026-01-11 06:57:50,836 | INFO     | exitcode: 0
[2026-01-11 01:58:50] 2026-01-11 06:57:50,836 | INFO     | exitmsg: OK
[2026-01-11 01:58:50] 2026-01-11 06:57:50,836 | INFO     | cpuconsumptiontime: 43774 s
[2026-01-11 01:58:50] 2026-01-11 06:57:50,836 | INFO     | nevents: 400
[2026-01-11 01:58:50] 2026-01-11 06:57:50,836 | INFO     | neventsw: 0
[2026-01-11 01:58:50] 2026-01-11 06:57:50,836 | INFO     | pid: 4019122
[2026-01-11 01:58:50] 2026-01-11 06:57:50,836 | INFO     | pgrp: 4019122
[2026-01-11 01:58:50] 2026-01-11 06:57:50,836 | INFO     | corecount: 12
[2026-01-11 01:58:50] 2026-01-11 06:57:50,836 | INFO     | event service: False
[2026-01-11 01:58:50] 2026-01-11 06:57:50,836 | INFO     | sizes: {0: 2283964, 4: 2284226, 11: 2284254, 6889: 2311559, 6892: 2320557, 6894: 2320613, 6904: 2320935}
[2026-01-11 01:58:50] 2026-01-11 06:57:50,836 | INFO     | --------------------------------------------------
[2026-01-11 01:58:50] 2026-01-11 06:57:50,836 | INFO     | 
[2026-01-11 01:58:50] 2026-01-11 06:57:50,837 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-11 01:58:50] 2026-01-11 06:57:50,877 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 01:58:50] 2026-01-11 06:57:50,877 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 01:58:50] 2026-01-11 06:57:50,877 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 01:58:50] 2026-01-11 06:57:50,877 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 01:58:50] 2026-01-11 06:57:50,877 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 01:58:50] 2026-01-11 06:57:50,877 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 01:58:50] 2026-01-11 06:57:50,877 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 01:58:50] 2026-01-11 06:57:50,877 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 01:58:50] 2026-01-11 06:57:50,877 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 01:58:50] 2026-01-11 06:57:50,878 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 01:58:50] 2026-01-11 06:57:50,878 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 01:58:50] 2026-01-11 06:57:50,878 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 01:58:50] 2026-01-11 06:57:50,878 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 01:58:50] 2026-01-11 06:57:50,878 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 01:58:50] 2026-01-11 06:57:50,878 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 01:58:50] 2026-01-11 06:57:50,878 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 01:58:50] 2026-01-11 06:57:50,878 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 01:58:50] 2026-01-11 06:57:50,878 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 01:58:50] 2026-01-11 06:57:50,878 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 01:58:50] 2026-01-11 06:57:50,878 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 01:58:50] 2026-01-11 06:57:50,878 | INFO     | job 6962016985 has completed (purged errors)
[2026-01-11 01:58:50] 2026-01-11 06:57:50,878 | INFO     | overall cleanup function is called
[2026-01-11 01:58:50] 2026-01-11 06:57:51,887 | INFO     | --- collectZombieJob: --- 10, [4019122]
[2026-01-11 01:58:50] 2026-01-11 06:57:51,887 | INFO     | zombie collector waiting for pid 4019122
[2026-01-11 01:58:50] 2026-01-11 06:57:51,887 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 01:58:50] 2026-01-11 06:57:51,888 | INFO     | collected zombie processes
[2026-01-11 01:58:50] 2026-01-11 06:57:51,888 | INFO     | will attempt to kill all subprocesses of pid=4019122
[2026-01-11 01:58:50] 2026-01-11 06:57:52,352 | INFO     | process IDs to be killed: [4019122] (in reverse order)
[2026-01-11 01:58:50] 2026-01-11 06:57:52,500 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 01:58:50] 2026-01-11 06:57:52,500 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 01:58:50] 2026-01-11 06:57:52,518 | INFO     | did not find any defunct processes belonging to 4019122
[2026-01-11 01:58:50] 2026-01-11 06:57:52,536 | INFO     | did not find any defunct processes belonging to 4019122
[2026-01-11 01:58:50] 2026-01-11 06:57:52,537 | INFO     | ready for new job
[2026-01-11 01:58:50] 2026-01-11 06:57:52,537 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 01:58:50] 2026-01-11 06:57:52,540 | INFO     | ***************************************
[2026-01-11 01:58:50] 2026-01-11 06:57:52,540 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 01:58:50] 2026-01-11 06:57:52,540 | INFO     | ***************************************
[2026-01-11 01:58:50] 2026-01-11 06:57:52,540 | INFO     | 
[2026-01-11 01:58:50] 2026-01-11 06:57:52,549 | INFO     | architecture information:
[2026-01-11 01:58:50] 2026-01-11 06:57:52,556 | INFO     | executing command: cat /etc/os-release
[2026-01-11 01:58:50] 2026-01-11 06:57:52,583 | INFO     | cat /etc/os-release:
[2026-01-11 01:58:50] NAME="CentOS Linux"
[2026-01-11 01:58:50] VERSION="7 (Core)"
[2026-01-11 01:58:50] ID="centos"
[2026-01-11 01:58:50] ID_LIKE="rhel fedora"
[2026-01-11 01:58:50] VERSION_ID="7"
[2026-01-11 01:58:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 01:58:50] ANSI_COLOR="0;31"
[2026-01-11 01:58:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 01:58:50] HOME_URL="https://www.centos.org/"
[2026-01-11 01:58:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 01:58:50] 
[2026-01-11 01:58:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 01:58:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 01:58:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 01:58:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 01:58:50] 
[2026-01-11 01:58:50] 2026-01-11 06:57:52,584 | INFO     | ***************************************
[2026-01-11 01:58:50] 2026-01-11 06:57:53,087 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-11 01:58:50] 2026-01-11 06:57:53,136 | INFO     | sufficient remaining disk space (129782251520 B)
[2026-01-11 01:58:50] 2026-01-11 06:57:53,136 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 01:58:50] 2026-01-11 06:57:53,136 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 01:58:50] 2026-01-11 06:57:53,137 | INFO     | update_server=False
[2026-01-11 01:58:50] 2026-01-11 06:57:53,137 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 01:58:50] 2026-01-11 06:57:53,223 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 01:58:50] 2026-01-11 06:57:53,224 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 01:58:50] 2026-01-11 06:57:53,224 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 01:58:50] 2026-01-11 06:57:53,224 | INFO     | will abort loop
[2026-01-11 01:58:50] 2026-01-11 06:57:53,308 | INFO     | all data control threads have been joined
[2026-01-11 01:58:50] 2026-01-11 06:57:53,404 | INFO     | all job control threads have been joined
[2026-01-11 01:58:50] 2026-01-11 06:57:54,142 | INFO     | [job] retrieve thread has finished
[2026-01-11 01:58:50] 2026-01-11 06:57:54,155 | INFO     | [payload] failed_post thread has finished
[2026-01-11 01:58:50] 2026-01-11 06:57:54,215 | INFO     | [data] copytool_in thread has finished
[2026-01-11 01:58:50] 2026-01-11 06:57:54,218 | INFO     | all payload control threads have been joined
[2026-01-11 01:58:50] 2026-01-11 06:57:54,234 | INFO     | [job] job monitor thread has finished
[2026-01-11 01:58:50] 2026-01-11 06:57:54,259 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 01:58:50] 2026-01-11 06:57:54,313 | INFO     | [data] control thread has finished
[2026-01-11 01:58:50] 2026-01-11 06:57:54,410 | INFO     | [job] control thread has finished
[2026-01-11 01:58:50] 2026-01-11 06:57:54,617 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 01:58:50] 2026-01-11 06:57:54,734 | INFO     | [payload] validate_post thread has finished
[2026-01-11 01:58:50] 2026-01-11 06:57:54,878 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 01:58:50] 2026-01-11 06:57:55,213 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 01:58:50] 2026-01-11 06:57:55,224 | INFO     | [payload] control thread has finished
[2026-01-11 01:58:50] 2026-01-11 06:57:55,294 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 01:58:50] 2026-01-11 06:57:55,307 | INFO     | [job] validate thread has finished
[2026-01-11 01:58:50] 2026-01-11 06:57:55,850 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 01:58:50] 2026-01-11 06:57:55,899 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 01:58:50] 2026-01-11 06:57:56,267 | INFO     | [data] copytool_out thread has finished
[2026-01-11 01:58:50] 2026-01-11 06:57:56,856 | INFO     | [job] queue monitor thread has finished
[2026-01-11 01:58:50] 2026-01-11 06:57:59,906 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 01:58:50] 2026-01-11 06:58:23,605 | INFO     | PID=4012683 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 01:58:50] 2026-01-11 06:58:23,605 | INFO     | .. there are 19 such processes running
[2026-01-11 01:58:50] 2026-01-11 06:58:23,605 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 01:58:50] 2026-01-11 06:58:23,605 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 01:58:50] 2026-01-11 06:58:23,605 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 01:58:50] 2026-01-11 06:58:42,477 | INFO     | [monitor] cgroup control has ended
[2026-01-11 01:58:50] 2026-01-11 06:58:44,077 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139865778730816)>', '<ExcThread(monitor, started 139865425417984)>']
[2026-01-11 01:58:50] 2026-01-11 06:58:44,731 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 01:58:50] 2026-01-11 06:58:44,731 | INFO     | [monitor] control thread has ended
[2026-01-11 01:58:50] 2026-01-11 06:58:49,103 | INFO     | all workflow threads have been joined
[2026-01-11 01:58:50] 2026-01-11 06:58:49,104 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 01:58:50] 2026-01-11 06:58:49,104 | INFO     | traces error code: 0
[2026-01-11 01:58:50] 2026-01-11 06:58:49,105 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 01:58:50] 2026-01-11 06:58:49,267 [wrapper] ==== pilot stdout END ====
[2026-01-11 01:58:50] 2026-01-11 06:58:49,270 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 01:58:50] 2026-01-11 06:58:49,291 [wrapper] pilotpid: 4012683
[2026-01-11 01:58:50] 2026-01-11 06:58:49,294 [wrapper] Pilot exit status: 0
[2026-01-11 01:58:50] 2026-01-11 06:58:49,373 [wrapper] pandaids: 6962016985
[2026-01-11 01:58:50] 2026-01-11 06:58:49,839 [wrapper] cleanup supervisor_pilot  101798 4012684
[2026-01-11 01:58:50] 2026-01-11 06:58:49,861 [wrapper] Test setup, not cleaning
[2026-01-11 01:58:50] 2026-01-11 06:58:49,900 [wrapper] apfmon messages muted
[2026-01-11 01:58:50] 2026-01-11 06:58:49,905 [wrapper] ==== wrapper stdout END ====
[2026-01-11 01:58:50] 2026-01-11 06:58:49,908 [wrapper] ==== wrapper stderr END ====
[2026-01-11 01:58:50]  *** Error codes and diagnostics ***
[2026-01-11 01:58:50]     "exeErrorCode": 0,
[2026-01-11 01:58:50]     "exeErrorDiag": "",
[2026-01-11 01:58:50]     "pilotErrorCode": 0,
[2026-01-11 01:58:50]     "pilotErrorDiag": "",
[2026-01-11 01:58:50]  *** Listing of results directory ***
[2026-01-11 01:58:50] total 437340
[2026-01-11 01:58:50] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 10:25 pilot3.tar.gz
[2026-01-11 01:58:50] -rwx------. 1 boincer umatlas     36322 Jan  7 10:33 runpilot2-wrapper.sh
[2026-01-11 01:58:50] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 10:36 queuedata.json
[2026-01-11 01:58:50] -rw-r--r--. 1 boincer umatlas       100 Jan 11 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 01:58:50] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 11 00:02 run_atlas
[2026-01-11 01:58:50] -rw-r--r--. 1 boincer umatlas       105 Jan 11 00:02 job.xml
[2026-01-11 01:58:50] -rw-r--r--. 2 boincer umatlas 225644631 Jan 11 00:02 EVNT.47898824._000490.pool.root.1
[2026-01-11 01:58:50] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 00:02 start_atlas.sh
[2026-01-11 01:58:50] drwxrwx--x. 2 boincer umatlas      4096 Jan 11 00:02 shared
[2026-01-11 01:58:50] -rw-r--r--. 2 boincer umatlas    592391 Jan 11 00:02 input.tar.gz
[2026-01-11 01:58:50] -rw-r--r--. 1 boincer umatlas         0 Jan 11 00:02 boinc_lockfile
[2026-01-11 01:58:50] -rw-r--r--. 1 boincer umatlas      2516 Jan 11 00:02 pandaJob.out
[2026-01-11 01:58:50] -rw-------. 1 boincer umatlas        57 Jan 11 00:02 setup.sh.local
[2026-01-11 01:58:50] -rw-------. 1 boincer umatlas    989548 Jan 11 00:02 agis_schedconf.cvmfs.json
[2026-01-11 01:58:50] -rw-------. 1 boincer umatlas   1516240 Jan 11 00:02 agis_ddmendpoints.agis.ALL.json
[2026-01-11 01:58:50] drwx------. 5 boincer umatlas      4096 Jan 11 00:02 pilot3
[2026-01-11 01:58:50] -rw-r--r--. 1 boincer umatlas      6957 Jan 11 01:55 init_data.xml
[2026-01-11 01:58:50] -rw-------. 1 boincer umatlas 215486147 Jan 11 01:56 HITS.47898826._009667.pool.root.1
[2026-01-11 01:58:50] -rw-r--r--. 1 boincer umatlas       529 Jan 11 01:57 boinc_task_state.xml
[2026-01-11 01:58:50] -rw-------. 1 boincer umatlas      1032 Jan 11 01:57 memory_monitor_summary.json
[2026-01-11 01:58:50] -rw-------. 1 boincer umatlas    418414 Jan 11 01:57 log.47898826._009667.job.log.tgz.1
[2026-01-11 01:58:50] -rw-------. 1 boincer umatlas        95 Jan 11 01:57 pilot_heartbeat.json
[2026-01-11 01:58:50] -rw-------. 1 boincer umatlas      7768 Jan 11 01:57 heartbeat.json
[2026-01-11 01:58:50] -rw-r--r--. 1 boincer umatlas        27 Jan 11 01:58 wrapper_checkpoint.txt
[2026-01-11 01:58:50] -rw-------. 1 boincer umatlas      5011 Jan 11 01:58 pilotlog.txt
[2026-01-11 01:58:50] -rw-------. 1 boincer umatlas    974920 Jan 11 01:58 log.47898826._009667.job.log.1
[2026-01-11 01:58:50] -rw-------. 1 boincer umatlas       357 Jan 11 01:58 output.list
[2026-01-11 01:58:50] -rw-r--r--. 1 boincer umatlas       620 Jan 11 01:58 runtime_log
[2026-01-11 01:58:50] -rw-------. 1 boincer umatlas   1413120 Jan 11 01:58 result.tar.gz
[2026-01-11 01:58:50] -rw-------. 1 boincer umatlas       652 Jan 11 01:58 xjHKDmcikx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqLiKDmDJ0TGn.diag
[2026-01-11 01:58:50] -rw-r--r--. 1 boincer umatlas      9339 Jan 11 01:58 runtime_log.err
[2026-01-11 01:58:50] -rw-r--r--. 1 boincer umatlas      8192 Jan 11 01:58 boinc_mmap_file
[2026-01-11 01:58:50] -rw-r--r--. 1 boincer umatlas     20943 Jan 11 01:58 stderr.txt
[2026-01-11 01:58:50] HITS file was successfully produced:
[2026-01-11 01:58:50] -rw-------. 1 boincer umatlas 215486147 Jan 11 01:56 shared/HITS.pool.root.1
[2026-01-11 01:58:50]  *** Contents of shared directory: ***
[2026-01-11 01:58:50] total 432776
[2026-01-11 01:58:50] -rw-r--r--. 2 boincer umatlas 225644631 Jan 11 00:02 ATLAS.root_0
[2026-01-11 01:58:50] -rw-r--r--. 2 boincer umatlas     15847 Jan 11 00:02 start_atlas.sh
[2026-01-11 01:58:50] -rw-r--r--. 2 boincer umatlas    592391 Jan 11 00:02 input.tar.gz
[2026-01-11 01:58:50] -rw-------. 1 boincer umatlas 215486147 Jan 11 01:56 HITS.pool.root.1
[2026-01-11 01:58:50] -rw-------. 1 boincer umatlas   1413120 Jan 11 01:58 result.tar.gz
01:58:51 (4008868): run_atlas exited; CPU time 44033.836807
01:58:51 (4008868): called boinc_finish(0)

</stderr_txt>
]]>

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